Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31412.t1 | XP_013465184.1 | 100 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 1.00E-101 | 379.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31412.t1 | Q40220 | 93.9 | 196 | 12 | 0 | 1 | 196 | 1 | 196 | 5.0e-102 | 371.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31412.t1 | A8IK57 | 100.0 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 7.2e-102 | 379.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051067 | MS.gene31412 | 0.803023 | 4.25E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene31412 | 0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene053538 | MS.gene31412 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene055537 | MS.gene31412 | 0.827682 | 1.37E-54 | -1.69E-46 |
| MS.gene055764 | MS.gene31412 | 0.863251 | 2.84E-64 | -1.69E-46 |
| MS.gene05894 | MS.gene31412 | 0.801072 | 1.07E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31412.t1 | MTR_2g090875 | 100.000 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 1.66e-147 | 407 |
| MS.gene31412.t1 | MTR_4g073250 | 84.772 | 197 | 29 | 1 | 1 | 196 | 1 | 197 | 2.31e-126 | 354 |
| MS.gene31412.t1 | MTR_4g088055 | 86.735 | 196 | 26 | 0 | 1 | 196 | 1 | 196 | 2.70e-121 | 341 |
| MS.gene31412.t1 | MTR_3g078260 | 79.082 | 196 | 40 | 1 | 2 | 196 | 4 | 199 | 1.46e-117 | 332 |
| MS.gene31412.t1 | MTR_8g075240 | 84.831 | 178 | 27 | 0 | 1 | 178 | 1 | 178 | 1.60e-116 | 329 |
| MS.gene31412.t1 | MTR_6g087980 | 77.387 | 199 | 41 | 1 | 1 | 195 | 1 | 199 | 1.77e-116 | 330 |
| MS.gene31412.t1 | MTR_5g022600 | 84.270 | 178 | 28 | 0 | 1 | 178 | 1 | 178 | 3.84e-115 | 326 |
| MS.gene31412.t1 | MTR_3g078260 | 86.555 | 119 | 16 | 0 | 2 | 120 | 4 | 122 | 7.40e-76 | 224 |
| MS.gene31412.t1 | MTR_7g103070 | 32.768 | 177 | 105 | 4 | 8 | 181 | 18 | 183 | 2.87e-28 | 105 |
| MS.gene31412.t1 | MTR_1g115325 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 1.04e-26 | 101 |
| MS.gene31412.t1 | MTR_1g068740 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 1.80e-26 | 100 |
| MS.gene31412.t1 | MTR_3g096350 | 31.414 | 191 | 112 | 6 | 7 | 190 | 13 | 191 | 1.81e-26 | 100 |
| MS.gene31412.t1 | MTR_1g068730 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 3.45e-26 | 100 |
| MS.gene31412.t1 | MTR_8g093740 | 31.844 | 179 | 107 | 5 | 6 | 181 | 13 | 179 | 4.44e-26 | 99.8 |
| MS.gene31412.t1 | MTR_7g100020 | 32.934 | 167 | 99 | 5 | 6 | 170 | 15 | 170 | 8.08e-26 | 99.4 |
| MS.gene31412.t1 | MTR_2g027660 | 31.977 | 172 | 103 | 5 | 1 | 170 | 1 | 160 | 5.05e-25 | 97.1 |
| MS.gene31412.t1 | MTR_6g021790 | 29.744 | 195 | 123 | 5 | 1 | 193 | 1 | 183 | 8.59e-25 | 96.7 |
| MS.gene31412.t1 | MTR_1g029450 | 31.285 | 179 | 108 | 5 | 6 | 181 | 17 | 183 | 1.36e-24 | 96.3 |
| MS.gene31412.t1 | MTR_1g094220 | 33.708 | 178 | 101 | 7 | 7 | 180 | 32 | 196 | 1.61e-24 | 95.5 |
| MS.gene31412.t1 | MTR_4g063160 | 33.136 | 169 | 98 | 6 | 6 | 170 | 15 | 172 | 5.18e-24 | 94.7 |
| MS.gene31412.t1 | MTR_1g062760 | 31.073 | 177 | 107 | 5 | 8 | 181 | 16 | 180 | 8.58e-24 | 94.0 |
| MS.gene31412.t1 | MTR_1g094220 | 33.721 | 172 | 97 | 7 | 7 | 174 | 32 | 190 | 1.29e-23 | 93.6 |
| MS.gene31412.t1 | MTR_1g094220 | 34.320 | 169 | 94 | 7 | 7 | 171 | 32 | 187 | 1.48e-23 | 93.2 |
| MS.gene31412.t1 | MTR_4g098950 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 1.60e-23 | 93.2 |
| MS.gene31412.t1 | MTR_1g094220 | 33.918 | 171 | 96 | 7 | 7 | 173 | 32 | 189 | 4.58e-23 | 92.8 |
| MS.gene31412.t1 | MTR_8g006970 | 29.534 | 193 | 111 | 6 | 6 | 196 | 8 | 177 | 1.27e-22 | 90.1 |
| MS.gene31412.t1 | MTR_8g006970 | 32.000 | 175 | 102 | 6 | 6 | 175 | 22 | 184 | 2.16e-22 | 90.5 |
| MS.gene31412.t1 | MTR_5g013900 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 3.79e-22 | 89.7 |
| MS.gene31412.t1 | MTR_8g031870 | 29.070 | 172 | 108 | 5 | 1 | 170 | 1 | 160 | 4.81e-22 | 89.0 |
| MS.gene31412.t1 | MTR_8g089985 | 35.758 | 165 | 92 | 5 | 8 | 170 | 19 | 171 | 6.24e-22 | 89.4 |
| MS.gene31412.t1 | MTR_2g083860 | 30.939 | 181 | 111 | 5 | 6 | 184 | 13 | 181 | 6.97e-22 | 89.0 |
| MS.gene31412.t1 | MTR_1g068730 | 34.109 | 129 | 82 | 3 | 6 | 132 | 15 | 142 | 7.16e-22 | 87.8 |
| MS.gene31412.t1 | MTR_2g096550 | 30.811 | 185 | 113 | 6 | 5 | 185 | 14 | 187 | 7.52e-22 | 89.0 |
| MS.gene31412.t1 | MTR_7g081700 | 30.769 | 169 | 103 | 5 | 6 | 172 | 8 | 164 | 1.15e-21 | 88.2 |
| MS.gene31412.t1 | MTR_3g087160 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 1.66e-21 | 87.8 |
| MS.gene31412.t1 | MTR_8g090215 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 2.30e-21 | 87.4 |
| MS.gene31412.t1 | MTR_1g068740 | 34.109 | 129 | 82 | 3 | 6 | 132 | 15 | 142 | 3.03e-21 | 87.0 |
| MS.gene31412.t1 | MTR_8g031660 | 28.488 | 172 | 109 | 5 | 1 | 170 | 1 | 160 | 4.03e-21 | 87.0 |
| MS.gene31412.t1 | MTR_3g086980 | 33.333 | 165 | 96 | 5 | 8 | 170 | 18 | 170 | 4.24e-21 | 87.0 |
| MS.gene31412.t1 | MTR_0262s0050 | 34.337 | 166 | 95 | 5 | 7 | 170 | 16 | 169 | 4.29e-21 | 87.0 |
| MS.gene31412.t1 | MTR_1g052475 | 34.940 | 166 | 94 | 5 | 7 | 170 | 16 | 169 | 5.39e-21 | 87.0 |
| MS.gene31412.t1 | MTR_2g102060 | 31.515 | 165 | 99 | 5 | 8 | 170 | 12 | 164 | 7.12e-21 | 85.9 |
| MS.gene31412.t1 | MTR_8g103550 | 31.515 | 165 | 99 | 5 | 8 | 170 | 11 | 163 | 7.51e-21 | 85.9 |
| MS.gene31412.t1 | MTR_3g069510 | 32.044 | 181 | 109 | 5 | 6 | 184 | 12 | 180 | 8.46e-21 | 86.3 |
| MS.gene31412.t1 | MTR_8g027220 | 33.939 | 165 | 95 | 5 | 8 | 170 | 28 | 180 | 2.32e-20 | 85.5 |
| MS.gene31412.t1 | MTR_2g005500 | 30.539 | 167 | 102 | 5 | 6 | 170 | 9 | 163 | 2.37e-20 | 84.7 |
| MS.gene31412.t1 | MTR_1g090717 | 29.744 | 195 | 116 | 7 | 7 | 191 | 16 | 199 | 2.78e-20 | 84.7 |
| MS.gene31412.t1 | MTR_8g031830 | 28.655 | 171 | 108 | 5 | 1 | 169 | 1 | 159 | 2.84e-20 | 84.3 |
| MS.gene31412.t1 | MTR_7g051940 | 31.492 | 181 | 110 | 5 | 6 | 184 | 13 | 181 | 3.65e-20 | 84.3 |
| MS.gene31412.t1 | MTR_4g064897 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 5.55e-20 | 84.0 |
| MS.gene31412.t1 | MTR_8g031680 | 27.326 | 172 | 111 | 5 | 1 | 170 | 1 | 160 | 5.94e-20 | 84.0 |
| MS.gene31412.t1 | MTR_2g005510 | 30.387 | 181 | 112 | 5 | 6 | 184 | 15 | 183 | 1.11e-19 | 83.2 |
| MS.gene31412.t1 | MTR_4g079350 | 36.567 | 134 | 82 | 3 | 6 | 137 | 13 | 145 | 1.63e-19 | 82.8 |
| MS.gene31412.t1 | MTR_7g117910 | 37.190 | 121 | 73 | 3 | 8 | 126 | 22 | 141 | 2.27e-19 | 82.4 |
| MS.gene31412.t1 | MTR_2g075950 | 31.737 | 167 | 100 | 5 | 6 | 170 | 13 | 167 | 2.52e-19 | 82.4 |
| MS.gene31412.t1 | MTR_4g088090 | 29.282 | 181 | 114 | 5 | 6 | 184 | 13 | 181 | 3.18e-19 | 82.0 |
| MS.gene31412.t1 | MTR_2g014990 | 30.387 | 181 | 112 | 5 | 6 | 184 | 13 | 181 | 4.00e-19 | 81.6 |
| MS.gene31412.t1 | MTR_1g097420 | 29.688 | 192 | 118 | 6 | 1 | 184 | 1 | 183 | 4.20e-19 | 81.6 |
| MS.gene31412.t1 | MTR_7g405790 | 29.282 | 181 | 114 | 5 | 6 | 184 | 15 | 183 | 4.79e-19 | 81.6 |
| MS.gene31412.t1 | MTR_8g093740 | 29.630 | 162 | 90 | 4 | 22 | 181 | 7 | 146 | 1.22e-18 | 79.7 |
| MS.gene31412.t1 | MTR_3g064390 | 30.303 | 165 | 101 | 4 | 8 | 170 | 12 | 164 | 1.40e-18 | 80.1 |
| MS.gene31412.t1 | MTR_1g078200 | 30.460 | 174 | 107 | 5 | 6 | 177 | 14 | 175 | 2.17e-18 | 80.1 |
| MS.gene31412.t1 | MTR_2g101890 | 29.032 | 186 | 117 | 5 | 6 | 185 | 10 | 186 | 3.32e-18 | 79.3 |
| MS.gene31412.t1 | MTR_7g103070 | 32.117 | 137 | 80 | 3 | 47 | 181 | 2 | 127 | 3.37e-18 | 77.8 |
| MS.gene31412.t1 | MTR_8g092020 | 29.379 | 177 | 110 | 4 | 6 | 176 | 12 | 179 | 4.99e-18 | 78.6 |
| MS.gene31412.t1 | MTR_5g076590 | 29.091 | 165 | 103 | 4 | 8 | 170 | 12 | 164 | 7.01e-18 | 78.2 |
| MS.gene31412.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 1.03e-17 | 76.6 |
| MS.gene31412.t1 | MTR_4g069850 | 27.957 | 186 | 119 | 4 | 6 | 185 | 8 | 184 | 1.18e-17 | 77.8 |
| MS.gene31412.t1 | MTR_8g036220 | 31.138 | 167 | 101 | 5 | 6 | 170 | 16 | 170 | 1.21e-17 | 78.2 |
| MS.gene31412.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 1.24e-17 | 76.3 |
| MS.gene31412.t1 | MTR_8g107070 | 29.282 | 181 | 114 | 5 | 6 | 184 | 14 | 182 | 2.86e-17 | 77.8 |
| MS.gene31412.t1 | MTR_4g012940 | 28.495 | 186 | 118 | 5 | 6 | 185 | 8 | 184 | 2.92e-17 | 76.6 |
| MS.gene31412.t1 | MTR_3g064390 | 33.607 | 122 | 78 | 3 | 8 | 127 | 12 | 132 | 4.02e-17 | 75.1 |
| MS.gene31412.t1 | MTR_2g090865 | 30.526 | 190 | 118 | 5 | 6 | 193 | 11 | 188 | 5.11e-17 | 76.3 |
| MS.gene31412.t1 | MTR_6g079550 | 33.871 | 124 | 79 | 3 | 6 | 127 | 12 | 134 | 4.97e-16 | 73.6 |
| MS.gene31412.t1 | MTR_1g097420 | 29.310 | 174 | 108 | 5 | 17 | 184 | 46 | 210 | 8.98e-16 | 73.2 |
| MS.gene31412.t1 | MTR_7g094810 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 3.72e-14 | 70.5 |
| MS.gene31412.t1 | MTR_7g094810 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 3.84e-14 | 70.5 |
| MS.gene31412.t1 | MTR_7g094810 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 3.92e-14 | 70.5 |
| MS.gene31412.t1 | MTR_7g094810 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 3.92e-14 | 70.5 |
| MS.gene31412.t1 | MTR_7g094810 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 3.94e-14 | 70.5 |
| MS.gene31412.t1 | MTR_4g099470 | 28.767 | 146 | 90 | 5 | 29 | 172 | 7 | 140 | 3.56e-13 | 65.1 |
| MS.gene31412.t1 | MTR_1g072280 | 28.409 | 176 | 114 | 5 | 7 | 180 | 13 | 178 | 6.29e-13 | 67.0 |
| MS.gene31412.t1 | MTR_1g082870 | 29.143 | 175 | 114 | 5 | 7 | 180 | 17 | 182 | 1.09e-11 | 63.2 |
| MS.gene31412.t1 | MTR_4g113620 | 28.926 | 121 | 76 | 4 | 7 | 127 | 14 | 124 | 4.41e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31412.t1 | AT1G75840 | 85.204 | 196 | 29 | 0 | 1 | 196 | 1 | 196 | 2.79e-120 | 338 |
| MS.gene31412.t1 | AT4G35020 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.54e-120 | 338 |
| MS.gene31412.t1 | AT4G35020 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.54e-120 | 338 |
| MS.gene31412.t1 | AT4G35020 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.54e-120 | 338 |
| MS.gene31412.t1 | AT5G45970 | 81.095 | 201 | 33 | 1 | 1 | 196 | 1 | 201 | 1.55e-119 | 337 |
| MS.gene31412.t1 | AT1G20090 | 87.047 | 193 | 25 | 0 | 4 | 196 | 3 | 195 | 1.58e-119 | 337 |
| MS.gene31412.t1 | AT3G51300 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 1.02e-117 | 332 |
| MS.gene31412.t1 | AT2G17800 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 3.53e-117 | 331 |
| MS.gene31412.t1 | AT2G17800 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 3.53e-117 | 331 |
| MS.gene31412.t1 | AT4G35950 | 84.831 | 178 | 27 | 0 | 1 | 178 | 1 | 178 | 4.44e-116 | 328 |
| MS.gene31412.t1 | AT3G48040 | 82.123 | 179 | 32 | 0 | 2 | 180 | 4 | 182 | 7.19e-113 | 320 |
| MS.gene31412.t1 | AT5G62880 | 81.006 | 179 | 34 | 0 | 2 | 180 | 4 | 182 | 4.80e-112 | 318 |
| MS.gene31412.t1 | AT4G28950 | 76.684 | 193 | 41 | 2 | 1 | 191 | 1 | 191 | 2.65e-111 | 317 |
| MS.gene31412.t1 | AT2G44690 | 78.261 | 184 | 40 | 0 | 6 | 189 | 18 | 201 | 5.28e-109 | 311 |
| MS.gene31412.t1 | AT5G62880 | 79.070 | 172 | 32 | 1 | 2 | 173 | 4 | 171 | 2.52e-103 | 296 |
| MS.gene31412.t1 | AT3G48040 | 81.595 | 163 | 30 | 0 | 2 | 164 | 4 | 166 | 2.00e-102 | 293 |
| MS.gene31412.t1 | AT3G51290 | 85.517 | 145 | 21 | 0 | 34 | 178 | 635 | 779 | 9.70e-88 | 274 |
| MS.gene31412.t1 | AT4G35020 | 90.000 | 120 | 12 | 0 | 1 | 120 | 1 | 120 | 6.39e-81 | 237 |
| MS.gene31412.t1 | AT4G35020 | 90.000 | 120 | 12 | 0 | 1 | 120 | 1 | 120 | 6.39e-81 | 237 |
| MS.gene31412.t1 | AT1G43890 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.27e-26 | 100 |
| MS.gene31412.t1 | AT1G43890 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.27e-26 | 100 |
| MS.gene31412.t1 | AT1G43890 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.27e-26 | 100 |
| MS.gene31412.t1 | AT3G46060 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.89e-26 | 100 |
| MS.gene31412.t1 | AT3G46060 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.89e-26 | 100 |
| MS.gene31412.t1 | AT3G46060 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.89e-26 | 100 |
| MS.gene31412.t1 | AT4G35860 | 32.044 | 181 | 109 | 5 | 1 | 179 | 1 | 169 | 7.01e-26 | 99.4 |
| MS.gene31412.t1 | AT3G54840 | 33.333 | 177 | 103 | 5 | 7 | 180 | 34 | 198 | 8.80e-26 | 99.0 |
| MS.gene31412.t1 | AT3G53610 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.28e-25 | 99.0 |
| MS.gene31412.t1 | AT3G53610 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.28e-25 | 99.0 |
| MS.gene31412.t1 | AT3G53610 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.28e-25 | 99.0 |
| MS.gene31412.t1 | AT3G54840 | 33.929 | 168 | 96 | 5 | 7 | 171 | 34 | 189 | 1.55e-25 | 98.2 |
| MS.gene31412.t1 | AT5G59840 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 2.72e-25 | 98.2 |
| MS.gene31412.t1 | AT4G17170 | 31.977 | 172 | 103 | 5 | 1 | 170 | 1 | 160 | 3.21e-25 | 97.8 |
| MS.gene31412.t1 | AT3G54840 | 33.333 | 174 | 101 | 5 | 10 | 180 | 3 | 164 | 3.45e-25 | 96.7 |
| MS.gene31412.t1 | AT4G17160 | 30.814 | 172 | 105 | 5 | 1 | 170 | 1 | 160 | 1.08e-23 | 93.6 |
| MS.gene31412.t1 | AT1G18200 | 33.702 | 181 | 106 | 5 | 6 | 184 | 13 | 181 | 1.83e-23 | 93.6 |
| MS.gene31412.t1 | AT4G39890 | 35.294 | 170 | 94 | 6 | 4 | 170 | 8 | 164 | 4.18e-23 | 92.4 |
| MS.gene31412.t1 | AT1G16920 | 31.868 | 182 | 110 | 5 | 6 | 185 | 13 | 182 | 6.95e-23 | 91.7 |
| MS.gene31412.t1 | AT5G03530 | 29.944 | 177 | 109 | 5 | 8 | 181 | 15 | 179 | 1.15e-22 | 90.9 |
| MS.gene31412.t1 | AT5G03530 | 29.944 | 177 | 109 | 5 | 8 | 181 | 15 | 179 | 1.15e-22 | 90.9 |
| MS.gene31412.t1 | AT3G09900 | 33.523 | 176 | 104 | 5 | 6 | 179 | 15 | 179 | 1.22e-22 | 91.3 |
| MS.gene31412.t1 | AT1G73640 | 34.807 | 181 | 104 | 5 | 6 | 184 | 13 | 181 | 1.23e-22 | 91.7 |
| MS.gene31412.t1 | AT2G22290 | 36.364 | 165 | 91 | 5 | 8 | 170 | 11 | 163 | 1.95e-22 | 90.5 |
| MS.gene31412.t1 | AT1G02130 | 31.953 | 169 | 101 | 5 | 6 | 172 | 8 | 164 | 2.21e-22 | 90.1 |
| MS.gene31412.t1 | AT2G44610 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 5.62e-22 | 89.4 |
| MS.gene31412.t1 | AT5G45130 | 32.121 | 165 | 98 | 4 | 8 | 170 | 12 | 164 | 7.15e-22 | 88.6 |
| MS.gene31412.t1 | AT5G03520 | 33.523 | 176 | 104 | 5 | 6 | 179 | 15 | 179 | 1.10e-21 | 88.6 |
| MS.gene31412.t1 | AT4G19640 | 33.939 | 165 | 95 | 5 | 8 | 170 | 12 | 164 | 1.14e-21 | 88.2 |
| MS.gene31412.t1 | AT2G43130 | 30.220 | 182 | 113 | 5 | 6 | 185 | 12 | 181 | 1.56e-21 | 88.2 |
| MS.gene31412.t1 | AT5G10260 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 1.87e-21 | 87.8 |
| MS.gene31412.t1 | AT3G12160 | 35.152 | 165 | 93 | 5 | 8 | 170 | 17 | 169 | 2.22e-21 | 87.8 |
| MS.gene31412.t1 | AT3G11730 | 29.940 | 167 | 103 | 5 | 6 | 170 | 8 | 162 | 2.47e-21 | 87.4 |
| MS.gene31412.t1 | AT5G45130 | 31.902 | 163 | 97 | 4 | 10 | 170 | 22 | 172 | 2.71e-21 | 87.4 |
| MS.gene31412.t1 | AT1G09630 | 33.152 | 184 | 108 | 5 | 6 | 175 | 12 | 194 | 2.87e-21 | 87.4 |
| MS.gene31412.t1 | AT5G64990 | 35.758 | 165 | 92 | 5 | 8 | 170 | 9 | 161 | 4.36e-21 | 86.7 |
| MS.gene31412.t1 | AT2G31680 | 30.769 | 182 | 112 | 5 | 6 | 185 | 12 | 181 | 5.17e-21 | 87.0 |
| MS.gene31412.t1 | AT4G17530 | 30.481 | 187 | 111 | 7 | 6 | 185 | 8 | 182 | 1.02e-20 | 85.9 |
| MS.gene31412.t1 | AT5G47200 | 30.769 | 182 | 107 | 7 | 6 | 180 | 8 | 177 | 2.10e-20 | 84.7 |
| MS.gene31412.t1 | AT1G06400 | 32.609 | 184 | 107 | 6 | 6 | 187 | 13 | 181 | 3.16e-20 | 84.7 |
| MS.gene31412.t1 | AT1G22740 | 30.729 | 192 | 116 | 6 | 1 | 184 | 1 | 183 | 3.82e-20 | 84.3 |
| MS.gene31412.t1 | AT5G45750 | 32.335 | 167 | 99 | 5 | 6 | 170 | 13 | 167 | 6.72e-20 | 84.0 |
| MS.gene31412.t1 | AT5G65270 | 31.285 | 179 | 109 | 5 | 8 | 184 | 19 | 185 | 7.95e-20 | 84.0 |
| MS.gene31412.t1 | AT5G59150 | 30.387 | 181 | 112 | 5 | 6 | 184 | 12 | 180 | 8.10e-20 | 83.6 |
| MS.gene31412.t1 | AT4G18430 | 31.492 | 181 | 110 | 5 | 6 | 184 | 13 | 181 | 8.99e-20 | 83.6 |
| MS.gene31412.t1 | AT1G05810 | 30.220 | 182 | 113 | 5 | 6 | 185 | 12 | 181 | 9.27e-20 | 83.6 |
| MS.gene31412.t1 | AT4G18800 | 29.834 | 181 | 113 | 5 | 6 | 184 | 13 | 181 | 1.09e-19 | 83.2 |
| MS.gene31412.t1 | AT1G05810 | 31.579 | 171 | 103 | 5 | 6 | 174 | 58 | 216 | 1.19e-19 | 84.3 |
| MS.gene31412.t1 | AT5G47520 | 30.460 | 174 | 107 | 5 | 6 | 177 | 14 | 175 | 1.98e-19 | 82.8 |
| MS.gene31412.t1 | AT1G07410 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 2.13e-19 | 82.4 |
| MS.gene31412.t1 | AT3G15060 | 38.017 | 121 | 72 | 3 | 8 | 126 | 15 | 134 | 2.76e-19 | 82.4 |
| MS.gene31412.t1 | AT3G18820 | 29.032 | 186 | 117 | 5 | 6 | 185 | 8 | 184 | 2.89e-19 | 82.0 |
| MS.gene31412.t1 | AT4G19640 | 35.246 | 122 | 76 | 3 | 8 | 127 | 12 | 132 | 5.47e-19 | 79.7 |
| MS.gene31412.t1 | AT4G39990 | 30.723 | 166 | 101 | 5 | 8 | 171 | 19 | 172 | 6.59e-19 | 81.3 |
| MS.gene31412.t1 | AT3G46830 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 7.92e-19 | 81.3 |
| MS.gene31412.t1 | AT3G46830 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 7.92e-19 | 81.3 |
| MS.gene31412.t1 | AT3G07410 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 1.39e-18 | 80.5 |
| MS.gene31412.t1 | AT5G60860 | 36.585 | 123 | 75 | 3 | 6 | 126 | 13 | 134 | 1.45e-18 | 80.5 |
| MS.gene31412.t1 | AT5G47960 | 32.121 | 165 | 98 | 5 | 8 | 170 | 17 | 169 | 1.52e-18 | 80.5 |
| MS.gene31412.t1 | AT4G19640 | 35.246 | 122 | 76 | 3 | 8 | 127 | 12 | 132 | 1.62e-18 | 79.7 |
| MS.gene31412.t1 | AT1G28550 | 37.398 | 123 | 74 | 3 | 6 | 126 | 13 | 134 | 1.71e-18 | 80.1 |
| MS.gene31412.t1 | AT5G64990 | 34.302 | 172 | 92 | 6 | 8 | 170 | 9 | 168 | 2.00e-18 | 80.1 |
| MS.gene31412.t1 | AT2G21880 | 27.174 | 184 | 121 | 3 | 6 | 184 | 9 | 184 | 4.49e-18 | 79.0 |
| MS.gene31412.t1 | AT1G01200 | 32.121 | 165 | 99 | 5 | 8 | 170 | 30 | 183 | 6.38e-18 | 79.0 |
| MS.gene31412.t1 | AT2G33870 | 37.398 | 123 | 74 | 3 | 6 | 126 | 13 | 134 | 7.67e-18 | 78.6 |
| MS.gene31412.t1 | AT4G35860 | 32.090 | 134 | 78 | 4 | 47 | 179 | 2 | 123 | 1.89e-17 | 76.3 |
| MS.gene31412.t1 | AT1G52280 | 29.508 | 183 | 112 | 6 | 1 | 175 | 1 | 174 | 2.79e-17 | 76.6 |
| MS.gene31412.t1 | AT3G16100 | 28.495 | 186 | 118 | 5 | 6 | 185 | 8 | 184 | 9.63e-17 | 75.5 |
| MS.gene31412.t1 | AT4G09720 | 27.604 | 192 | 122 | 6 | 1 | 184 | 1 | 183 | 3.05e-16 | 73.9 |
| MS.gene31412.t1 | AT1G49300 | 29.240 | 171 | 106 | 5 | 6 | 170 | 8 | 169 | 6.05e-16 | 73.2 |
| MS.gene31412.t1 | AT1G49300 | 29.240 | 171 | 106 | 5 | 6 | 170 | 8 | 169 | 6.05e-16 | 73.2 |
| MS.gene31412.t1 | AT5G03520 | 33.582 | 134 | 77 | 4 | 47 | 179 | 47 | 169 | 1.37e-15 | 72.4 |
| MS.gene31412.t1 | AT3G09910 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.53e-15 | 72.0 |
| MS.gene31412.t1 | AT3G09910 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.53e-15 | 72.0 |
| MS.gene31412.t1 | AT3G09910 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.53e-15 | 72.0 |
| MS.gene31412.t1 | AT5G55080 | 32.479 | 117 | 77 | 2 | 7 | 122 | 14 | 129 | 3.44e-15 | 71.6 |
| MS.gene31412.t1 | AT3G09910 | 28.736 | 174 | 108 | 6 | 7 | 176 | 14 | 175 | 4.62e-15 | 70.5 |
| MS.gene31412.t1 | AT3G09910 | 28.736 | 174 | 108 | 6 | 7 | 176 | 14 | 175 | 4.62e-15 | 70.5 |
| MS.gene31412.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 7.29e-15 | 72.4 |
| MS.gene31412.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 7.29e-15 | 72.4 |
| MS.gene31412.t1 | AT4G09720 | 26.396 | 197 | 123 | 5 | 1 | 184 | 1 | 188 | 7.30e-15 | 70.5 |
| MS.gene31412.t1 | AT5G39620 | 26.943 | 193 | 128 | 4 | 7 | 194 | 6 | 190 | 1.21e-14 | 69.7 |
| MS.gene31412.t1 | AT3G63150 | 29.143 | 175 | 114 | 4 | 7 | 180 | 15 | 180 | 1.96e-14 | 71.2 |
| MS.gene31412.t1 | AT4G09720 | 25.616 | 203 | 123 | 5 | 1 | 184 | 1 | 194 | 6.11e-14 | 68.2 |
| MS.gene31412.t1 | AT5G59150 | 29.496 | 139 | 85 | 4 | 47 | 184 | 3 | 129 | 6.50e-13 | 64.3 |
| MS.gene31412.t1 | AT2G21880 | 25.749 | 167 | 111 | 3 | 23 | 184 | 1 | 159 | 3.92e-12 | 62.4 |
| MS.gene31412.t1 | AT2G21880 | 25.749 | 167 | 111 | 3 | 23 | 184 | 1 | 159 | 3.92e-12 | 62.4 |
Find 36 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACAGTTAATCTTGGATTA+TGG | 0.198843 | 2.4:+9619093 | MS.gene31412:CDS |
| CTATGAGAATATCTCTAAAA+AGG | 0.307511 | 2.4:+9619517 | MS.gene31412:CDS |
| TGTTTAGCTCGTACCAAGTT+TGG | 0.362787 | 2.4:-9619685 | None:intergenic |
| CACAGTTAATCTTGGATTAT+GGG | 0.369623 | 2.4:+9619094 | MS.gene31412:CDS |
| AGTGCAAATGTTGTGGTTGA+TGG | 0.385099 | 2.4:+9619068 | MS.gene31412:CDS |
| GATGGCAGCACAGTTAATCT+TGG | 0.412892 | 2.4:+9619086 | MS.gene31412:CDS |
| GGAGCATAATGTCTCAGTTC+AGG | 0.421519 | 2.4:-9619636 | None:intergenic |
| TTGCAGATTTGAGGGAAGAT+AGG | 0.427043 | 2.4:+9619801 | MS.gene31412:intron |
| TTGGTTCCCACAAGTACAAT+TGG | 0.428473 | 2.4:-9619666 | None:intergenic |
| TTTAGAGATATTCTCATAGC+TGG | 0.437146 | 2.4:-9619513 | None:intergenic |
| CTAAGGCCTTTGAGCTATAG+AGG | 0.441134 | 2.4:+9619449 | MS.gene31412:CDS |
| GAAGAGCTGAAGAGGGCAAT+TGG | 0.442300 | 2.4:+9620107 | MS.gene31412:CDS |
| CAGGACAAGAGGATTATAAC+AGG | 0.448519 | 2.4:+9619426 | MS.gene31412:intron |
| TTCATCAAATGTGTTACTGT+TGG | 0.452151 | 2.4:+9618859 | MS.gene31412:CDS |
| ATTATTGGCTTGCAGATTTG+AGG | 0.453983 | 2.4:+9619792 | MS.gene31412:intron |
| GTACTTGTGGGAACCAAACT+TGG | 0.454926 | 2.4:+9619672 | MS.gene31412:CDS |
| GTAGTTATAGCTGTAGCTCC+TGG | 0.478794 | 2.4:-9619842 | None:intergenic |
| TGTGTTTGATGCTGCAATCA+AGG | 0.491064 | 2.4:+9620336 | MS.gene31412:CDS |
| TTATTGGCTTGCAGATTTGA+GGG | 0.500835 | 2.4:+9619793 | MS.gene31412:intron |
| ACAAGTACAATTGGCACAGT+TGG | 0.513226 | 2.4:-9619657 | None:intergenic |
| GGCTCTGCTGAGTAGTGAAA+AGG | 0.521685 | 2.4:-9619492 | None:intergenic |
| AACTGTGCCAATTGTACTTG+TGG | 0.525586 | 2.4:+9619659 | MS.gene31412:CDS |
| AAGAGGATTATAACAGGCTA+AGG | 0.552702 | 2.4:+9619432 | MS.gene31412:CDS |
| TACAGCTATAACTACTGCCC+AGG | 0.559919 | 2.4:+9619850 | MS.gene31412:CDS |
| ATGCAGCTCAAAGACTCAGC+AGG | 0.566907 | 2.4:+9620148 | MS.gene31412:CDS |
| TGCGATATTTCAGAATGTGA+AGG | 0.567420 | 2.4:+9620312 | MS.gene31412:intron |
| CTTGGATTATGGGACACTGC+TGG | 0.569014 | 2.4:+9619104 | MS.gene31412:CDS |
| GGCAGGGTGAAGAGCTGAAG+AGG | 0.570105 | 2.4:+9620099 | MS.gene31412:intron |
| CAGTATTTGATTGATCATCC+AGG | 0.575063 | 2.4:+9619824 | MS.gene31412:CDS |
| ACTGTGCCAATTGTACTTGT+GGG | 0.592943 | 2.4:+9619660 | MS.gene31412:CDS |
| CACAAGCAATACATTCCCTA+CGG | 0.607441 | 2.4:+9618921 | MS.gene31412:CDS |
| ACTGTTGGAGATGGTGCTGT+TGG | 0.608648 | 2.4:+9618874 | MS.gene31412:CDS |
| TAACTTCAGTGCAAATGTTG+TGG | 0.625689 | 2.4:+9619061 | MS.gene31412:CDS |
| TCTGCTCCTCTATAGCTCAA+AGG | 0.639148 | 2.4:-9619455 | None:intergenic |
| AAATGTGTTACTGTTGGAGA+TGG | 0.644647 | 2.4:+9618865 | MS.gene31412:CDS |
| GCAGGGTGAAGAGCTGAAGA+GGG | 0.664533 | 2.4:+9620100 | MS.gene31412:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATTAACACAAAAAA+AGG | - | chr2.4:9619302-9619321 | None:intergenic | 10.0% |
| !! | ACAAATAATGTAAAATTTAT+GGG | + | chr2.4:9620078-9620097 | MS.gene31412:intron | 10.0% |
| !! | CACAAATAATGTAAAATTTA+TGG | + | chr2.4:9620077-9620096 | MS.gene31412:intron | 15.0% |
| !! | GTAGTCATTTAATAATTAAT+TGG | + | chr2.4:9619760-9619779 | MS.gene31412:intron | 15.0% |
| !! | TAATTATTAAATGACTACTA+AGG | - | chr2.4:9619758-9619777 | None:intergenic | 15.0% |
| !!! | AATTGGAACTTTTATATTAT+TGG | + | chr2.4:9619777-9619796 | MS.gene31412:intron | 15.0% |
| !!! | ATGTAAATTTAGTTTATGTT+TGG | + | chr2.4:9618979-9618998 | MS.gene31412:intron | 15.0% |
| !! | ACAAATTATAAATCGTAAAG+TGG | - | chr2.4:9619160-9619179 | None:intergenic | 20.0% |
| !! | ATTCCAAATAGTATTTAAGT+TGG | + | chr2.4:9619958-9619977 | MS.gene31412:intron | 20.0% |
| !! | CACAAAAAATTAGTAAATCT+TGG | - | chr2.4:9619392-9619411 | None:intergenic | 20.0% |
| !! | CATATATAGTTATATACTCA+TGG | + | chr2.4:9620188-9620207 | MS.gene31412:intron | 20.0% |
| !! | TTAACATAATCAGAGATTAT+TGG | + | chr2.4:9620216-9620235 | MS.gene31412:intron | 20.0% |
| !!! | CAAGATTTACTAATTTTTTG+TGG | + | chr2.4:9619390-9619409 | MS.gene31412:intron | 20.0% |
| !!! | TTCACTTGTGAATTTTTATA+TGG | + | chr2.4:9619560-9619579 | MS.gene31412:intron | 20.0% |
| !!! | TTTCTTTTTTTCTTTTGCTT+AGG | - | chr2.4:9620376-9620395 | None:intergenic | 20.0% |
| ! | ATAATGTAAAATTTATGGGC+AGG | + | chr2.4:9620082-9620101 | MS.gene31412:intron | 25.0% |
| ! | ATGCCAACTTAAATACTATT+TGG | - | chr2.4:9619964-9619983 | None:intergenic | 25.0% |
| ! | TAAGTAGCAAAGACATTTAA+CGG | + | chr2.4:9619193-9619212 | MS.gene31412:intron | 25.0% |
| ! | TAATGTAAAATTTATGGGCA+GGG | + | chr2.4:9620083-9620102 | MS.gene31412:intron | 25.0% |
| ! | TCATACAAATTTGTAGGAAA+TGG | + | chr2.4:9619877-9619896 | MS.gene31412:intron | 25.0% |
| ! | TTAATACAAAGCTAATAGTG+TGG | - | chr2.4:9620278-9620297 | None:intergenic | 25.0% |
| !! | CTATGAGAATATCTCTAAAA+AGG | + | chr2.4:9619517-9619536 | MS.gene31412:CDS | 25.0% |
| ACAAATTTGTATGACTTACC+TGG | - | chr2.4:9619871-9619890 | None:intergenic | 30.0% | |
| CAAATTTGTATGACTTACCT+GGG | - | chr2.4:9619870-9619889 | None:intergenic | 30.0% | |
| CACAAAAAAAGGATTCTATC+TGG | - | chr2.4:9619291-9619310 | None:intergenic | 30.0% | |
| CACAGTTAATCTTGGATTAT+GGG | + | chr2.4:9619094-9619113 | MS.gene31412:CDS | 30.0% | |
| CTGAAGTTATCAAAAACTGT+AGG | - | chr2.4:9619050-9619069 | None:intergenic | 30.0% | |
| GGTAAGTCATACAAATTTGT+AGG | + | chr2.4:9619871-9619890 | MS.gene31412:intron | 30.0% | |
| TCATAAAAATTCAGGACAAG+AGG | + | chr2.4:9619415-9619434 | MS.gene31412:intron | 30.0% | |
| TTGTGGCTTCATAAAAATTC+AGG | + | chr2.4:9619407-9619426 | MS.gene31412:intron | 30.0% | |
| TTTAGAGATATTCTCATAGC+TGG | - | chr2.4:9619516-9619535 | None:intergenic | 30.0% | |
| ! | CATGCTATCAAGGTTTTTAT+AGG | + | chr2.4:9620042-9620061 | MS.gene31412:intron | 30.0% |
| ! | CTATAGCTAATTTTATGCAG+TGG | + | chr2.4:9619610-9619629 | MS.gene31412:intron | 30.0% |
| ! | TTCATCAAATGTGTTACTGT+TGG | + | chr2.4:9618859-9618878 | MS.gene31412:CDS | 30.0% |
| !! | ACTTGTTCTTGTGTTTTTGA+AGG | + | chr2.4:9619016-9619035 | MS.gene31412:intron | 30.0% |
| !!! | CTTTTTTTCTTTTGCTTAGG+AGG | - | chr2.4:9620373-9620392 | None:intergenic | 30.0% |
| AAGAGGATTATAACAGGCTA+AGG | + | chr2.4:9619432-9619451 | MS.gene31412:CDS | 35.0% | |
| ATTGCGTTAACATGCTATCA+AGG | + | chr2.4:9620032-9620051 | MS.gene31412:intron | 35.0% | |
| CAGTATTTGATTGATCATCC+AGG | + | chr2.4:9619824-9619843 | MS.gene31412:CDS | 35.0% | |
| GCACAGTTAATCTTGGATTA+TGG | + | chr2.4:9619093-9619112 | MS.gene31412:CDS | 35.0% | |
| TAACTTCAGTGCAAATGTTG+TGG | + | chr2.4:9619061-9619080 | MS.gene31412:CDS | 35.0% | |
| TGCGATATTTCAGAATGTGA+AGG | + | chr2.4:9620312-9620331 | MS.gene31412:intron | 35.0% | |
| ! | AAATGTGTTACTGTTGGAGA+TGG | + | chr2.4:9618865-9618884 | MS.gene31412:CDS | 35.0% |
| ! | ATGTGTTGTTATCATACCGT+AGG | - | chr2.4:9618940-9618959 | None:intergenic | 35.0% |
| ! | TGCTGGTAAGCATTTTCTTT+AGG | + | chr2.4:9619121-9619140 | MS.gene31412:intron | 35.0% |
| ! | TGGTAAGCATTTTCTTTAGG+TGG | + | chr2.4:9619124-9619143 | MS.gene31412:intron | 35.0% |
| ! | TGTGTTGTTATCATACCGTA+GGG | - | chr2.4:9618939-9618958 | None:intergenic | 35.0% |
| !! | ATTATTGGCTTGCAGATTTG+AGG | + | chr2.4:9619792-9619811 | MS.gene31412:intron | 35.0% |
| !! | TTATTGGCTTGCAGATTTGA+GGG | + | chr2.4:9619793-9619812 | MS.gene31412:intron | 35.0% |
| AACTGTGCCAATTGTACTTG+TGG | + | chr2.4:9619659-9619678 | MS.gene31412:CDS | 40.0% | |
| AATTGAGAGATCTCAGTCGT+TGG | - | chr2.4:9620007-9620026 | None:intergenic | 40.0% | |
| ACAAGTACAATTGGCACAGT+TGG | - | chr2.4:9619660-9619679 | None:intergenic | 40.0% | |
| ACTGTGCCAATTGTACTTGT+GGG | + | chr2.4:9619660-9619679 | MS.gene31412:CDS | 40.0% | |
| AGTGCAAATGTTGTGGTTGA+TGG | + | chr2.4:9619068-9619087 | MS.gene31412:CDS | 40.0% | |
| CACAAGCAATACATTCCCTA+CGG | + | chr2.4:9618921-9618940 | MS.gene31412:CDS | 40.0% | |
| CAGGACAAGAGGATTATAAC+AGG | + | chr2.4:9619426-9619445 | MS.gene31412:intron | 40.0% | |
| TGTGTTTGATGCTGCAATCA+AGG | + | chr2.4:9620336-9620355 | MS.gene31412:CDS | 40.0% | |
| TTGCAGATTTGAGGGAAGAT+AGG | + | chr2.4:9619801-9619820 | MS.gene31412:intron | 40.0% | |
| TTGGTTCCCACAAGTACAAT+TGG | - | chr2.4:9619669-9619688 | None:intergenic | 40.0% | |
| ! | TGTTTAGCTCGTACCAAGTT+TGG | - | chr2.4:9619688-9619707 | None:intergenic | 40.0% |
| !! | AGGAGCAGATGTGTTTTTGT+TGG | + | chr2.4:9619469-9619488 | MS.gene31412:CDS | 40.0% |
| AGTCGTCTAGCCATCATTAG+CGG | - | chr2.4:9619935-9619954 | None:intergenic | 45.0% | |
| CAGATTTCAGCCGCTAATGA+TGG | + | chr2.4:9619922-9619941 | MS.gene31412:intron | 45.0% | |
| CTAAGGCCTTTGAGCTATAG+AGG | + | chr2.4:9619449-9619468 | MS.gene31412:CDS | 45.0% | |
| GATGGCAGCACAGTTAATCT+TGG | + | chr2.4:9619086-9619105 | MS.gene31412:CDS | 45.0% | |
| GGAGCATAATGTCTCAGTTC+AGG | - | chr2.4:9619639-9619658 | None:intergenic | 45.0% | |
| GTACTTGTGGGAACCAAACT+TGG | + | chr2.4:9619672-9619691 | MS.gene31412:CDS | 45.0% | |
| GTAGTTATAGCTGTAGCTCC+TGG | - | chr2.4:9619845-9619864 | None:intergenic | 45.0% | |
| TACAGCTATAACTACTGCCC+AGG | + | chr2.4:9619850-9619869 | MS.gene31412:CDS | 45.0% | |
| TCTGCTCCTCTATAGCTCAA+AGG | - | chr2.4:9619458-9619477 | None:intergenic | 45.0% | |
| ATGCAGCTCAAAGACTCAGC+AGG | + | chr2.4:9620148-9620167 | MS.gene31412:CDS | 50.0% | |
| CTTGGATTATGGGACACTGC+TGG | + | chr2.4:9619104-9619123 | MS.gene31412:CDS | 50.0% | |
| GAAGAGCTGAAGAGGGCAAT+TGG | + | chr2.4:9620107-9620126 | MS.gene31412:CDS | 50.0% | |
| GGCTCTGCTGAGTAGTGAAA+AGG | - | chr2.4:9619495-9619514 | None:intergenic | 50.0% | |
| !! | ACTGTTGGAGATGGTGCTGT+TGG | + | chr2.4:9618874-9618893 | MS.gene31412:CDS | 50.0% |
| GCAGGGTGAAGAGCTGAAGA+GGG | + | chr2.4:9620100-9620119 | MS.gene31412:intron | 55.0% | |
| GGCAGGGTGAAGAGCTGAAG+AGG | + | chr2.4:9620099-9620118 | MS.gene31412:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 9618844 | 9620423 | 9618844 | ID=MS.gene31412 |
| chr2.4 | mRNA | 9618844 | 9620423 | 9618844 | ID=MS.gene31412.t1;Parent=MS.gene31412 |
| chr2.4 | exon | 9618844 | 9618942 | 9618844 | ID=MS.gene31412.t1.exon1;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9618844 | 9618942 | 9618844 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9619038 | 9619125 | 9619038 | ID=MS.gene31412.t1.exon2;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9619038 | 9619125 | 9619038 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9619429 | 9619538 | 9619429 | ID=MS.gene31412.t1.exon3;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9619429 | 9619538 | 9619429 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9619630 | 9619693 | 9619630 | ID=MS.gene31412.t1.exon4;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9619630 | 9619693 | 9619630 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9619807 | 9619871 | 9619807 | ID=MS.gene31412.t1.exon5;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9619807 | 9619871 | 9619807 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9620104 | 9620169 | 9620104 | ID=MS.gene31412.t1.exon6;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9620104 | 9620169 | 9620104 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| chr2.4 | exon | 9620325 | 9620423 | 9620325 | ID=MS.gene31412.t1.exon7;Parent=MS.gene31412.t1 |
| chr2.4 | CDS | 9620325 | 9620423 | 9620325 | ID=cds.MS.gene31412.t1;Parent=MS.gene31412.t1 |
| Gene Sequence |
| Protein sequence |
