AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31670.t1 MTR_1g007380 99.364 472 3 0 1 472 1 472 0.0 968
MS.gene31670.t1 MTR_3g110660 83.686 472 77 0 1 472 11 482 0.0 831
MS.gene31670.t1 MTR_1g105980 64.579 463 164 0 7 469 6 468 0.0 658
MS.gene31670.t1 MTR_1g106000 63.158 456 159 1 23 469 15 470 0.0 627
MS.gene31670.t1 MTR_1g105995 61.987 463 176 0 7 469 5 467 0.0 626
MS.gene31670.t1 MTR_1g105990 63.158 456 165 1 12 464 10 465 0.0 620
MS.gene31670.t1 MTR_3g110660 87.952 332 40 0 1 332 11 342 0.0 603
MS.gene31670.t1 MTR_4g073520 57.576 462 190 2 13 469 49 509 0.0 577
MS.gene31670.t1 MTR_4g073520 57.576 462 190 2 13 469 49 509 0.0 576
MS.gene31670.t1 MTR_8g094290 58.696 460 185 3 12 471 20 474 0.0 566
MS.gene31670.t1 MTR_3g088455 56.114 458 197 2 12 469 23 476 0.0 563
MS.gene31670.t1 MTR_3g088475 56.863 459 193 3 12 469 23 477 0.0 561
MS.gene31670.t1 MTR_1g029750 58.734 458 186 3 13 469 25 480 0.0 554
MS.gene31670.t1 MTR_3g096800 52.790 466 213 4 6 471 18 476 0.0 525
MS.gene31670.t1 MTR_3g096840 53.433 466 212 3 3 468 19 479 0.0 516
MS.gene31670.t1 MTR_3g096830 56.652 466 194 5 3 468 7 464 0.0 516
MS.gene31670.t1 MTR_3g110420 50.870 460 224 2 13 472 14 471 1.53e-176 503
MS.gene31670.t1 MTR_1g007270 50.441 454 216 3 16 469 26 470 5.24e-169 484
MS.gene31670.t1 MTR_3g461440 49.436 443 220 2 16 458 16 454 8.90e-169 483
MS.gene31670.t1 MTR_3g461470 48.984 443 222 2 16 458 16 454 5.25e-167 479
MS.gene31670.t1 MTR_3g061390 49.887 443 218 2 16 458 16 454 3.68e-166 476
MS.gene31670.t1 MTR_1g007180 48.465 456 231 3 17 472 6 457 3.56e-164 471
MS.gene31670.t1 MTR_3g461430 49.658 439 217 2 20 458 27 461 5.13e-163 471
MS.gene31670.t1 MTR_3g110430 52.466 446 207 4 23 468 62 502 4.83e-161 465
MS.gene31670.t1 MTR_3g461480 49.443 449 222 3 17 464 21 465 5.30e-157 453
MS.gene31670.t1 MTR_2g031750 47.289 461 237 4 13 472 2 457 8.03e-157 453
MS.gene31670.t1 MTR_3g088465 57.923 366 149 3 12 376 23 384 1.14e-156 451
MS.gene31670.t1 MTR_1g007240 46.491 456 240 3 17 472 6 457 1.18e-156 452
MS.gene31670.t1 MTR_5g096840 46.453 437 229 3 23 458 29 461 5.96e-154 446
MS.gene31670.t1 MTR_5g096850 43.182 440 245 3 23 461 25 460 3.50e-133 393
MS.gene31670.t1 MTR_3g110420 55.312 320 142 1 13 332 14 332 4.74e-130 380
MS.gene31670.t1 MTR_2g031750 44.872 390 209 4 84 472 6 390 3.58e-123 364
MS.gene31670.t1 MTR_3g461440 47.531 324 166 2 138 461 1 320 3.72e-115 342
MS.gene31670.t1 MTR_1g007180 45.928 307 162 3 166 472 71 373 2.75e-97 298
MS.gene31670.t1 MTR_5g017200 56.809 257 98 4 12 268 21 264 6.55e-93 283
MS.gene31670.t1 MTR_6g022790 31.078 473 279 12 2 466 19 452 2.31e-58 199
MS.gene31670.t1 MTR_8g080120 29.106 481 280 13 3 468 1 435 8.95e-55 189
MS.gene31670.t1 MTR_2g101920 30.805 435 261 9 4 433 26 425 6.83e-54 187
MS.gene31670.t1 MTR_4g103890 29.360 453 267 11 24 466 11 420 1.68e-50 177
MS.gene31670.t1 MTR_2g096830 30.687 466 266 13 12 466 6 425 8.09e-49 173
MS.gene31670.t1 MTR_6g023065 29.769 477 278 12 6 466 25 460 1.00e-47 171
MS.gene31670.t1 MTR_6g022780 31.250 464 269 13 12 466 3 425 1.23e-46 167
MS.gene31670.t1 MTR_1g007190 46.193 197 86 5 34 225 21 202 6.01e-45 156
MS.gene31670.t1 MTR_7g038910 31.385 462 270 13 12 465 17 439 1.61e-44 162
MS.gene31670.t1 MTR_3g005740 29.810 473 285 11 4 466 31 466 1.94e-44 162
MS.gene31670.t1 MTR_7g038910 33.234 337 199 8 12 342 17 333 2.44e-44 160
MS.gene31670.t1 MTR_7g038910 33.236 343 203 8 12 348 17 339 4.19e-44 159
MS.gene31670.t1 MTR_2g096830 32.344 337 201 8 12 344 6 319 5.19e-44 158
MS.gene31670.t1 MTR_6g023075 30.819 464 268 14 12 466 6 425 5.54e-44 160
MS.gene31670.t1 MTR_3g085820 30.966 352 208 8 2 342 9 336 8.53e-42 153
MS.gene31670.t1 MTR_1g070470 26.739 460 293 13 17 469 16 438 4.01e-41 152
MS.gene31670.t1 MTR_5g054730 28.604 444 267 14 13 447 17 419 7.80e-40 149
MS.gene31670.t1 MTR_0531s0020 31.454 337 205 8 12 342 36 352 1.74e-38 144
MS.gene31670.t1 MTR_1g093030 27.669 459 277 13 19 466 20 434 4.56e-38 144
MS.gene31670.t1 MTR_1g093020 27.542 472 286 15 6 466 8 434 1.88e-37 142
MS.gene31670.t1 MTR_1g093020 28.146 437 262 13 6 433 8 401 3.09e-36 139
MS.gene31670.t1 MTR_4g055610 26.407 462 269 15 12 452 25 436 5.23e-32 127
MS.gene31670.t1 MTR_4g075750 25.054 467 304 12 7 459 56 490 6.05e-30 122
MS.gene31670.t1 MTR_8g099320 25.000 480 312 17 4 471 7 450 1.07e-27 115
MS.gene31670.t1 MTR_1g492640 24.835 455 292 17 26 468 62 478 9.60e-26 110
MS.gene31670.t1 MTR_3g115090 24.176 455 288 17 22 458 83 498 3.82e-22 99.8
MS.gene31670.t1 MTR_5g081630 24.941 421 266 15 54 468 4 380 8.06e-22 97.4
MS.gene31670.t1 MTR_5g023260 23.661 448 291 13 23 455 107 518 2.05e-18 88.2
MS.gene31670.t1 MTR_4g104510 24.726 457 288 19 8 451 18 431 4.45e-18 86.7
MS.gene31670.t1 MTR_5g023240 24.883 426 266 17 24 433 87 474 1.39e-17 85.5
MS.gene31670.t1 MTR_3g069960 28.278 389 227 18 89 468 35 380 3.99e-17 83.2
MS.gene31670.t1 MTR_3g069960 28.278 389 227 18 89 468 88 433 4.15e-17 84.0
MS.gene31670.t1 MTR_4g104510 25.054 459 286 20 8 451 18 433 5.47e-17 83.6
MS.gene31670.t1 MTR_1g492640 24.765 319 216 11 26 338 62 362 9.52e-17 82.4
MS.gene31670.t1 MTR_1g492640 24.765 319 216 11 26 338 44 344 1.07e-16 82.0
MS.gene31670.t1 MTR_1g492640 24.523 367 231 14 112 468 16 346 1.44e-15 78.2
MS.gene31670.t1 MTR_2g012470 22.152 474 291 16 23 467 95 519 4.56e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31670.t1 AT5G49630 74.678 466 116 2 6 469 14 479 0.0 733
MS.gene31670.t1 AT1G58360 66.667 468 153 2 4 469 15 481 0.0 678
MS.gene31670.t1 AT1G10010 65.451 466 160 1 4 469 8 472 0.0 653
MS.gene31670.t1 AT1G10010 65.451 466 160 1 4 469 9 473 0.0 653
MS.gene31670.t1 AT5G09220 60.217 460 180 3 11 469 33 490 0.0 589
MS.gene31670.t1 AT5G63850 59.130 460 185 3 11 469 6 463 0.0 582
MS.gene31670.t1 AT1G77380 58.386 471 192 3 1 471 9 475 0.0 570
MS.gene31670.t1 AT1G44100 53.763 465 209 2 12 471 16 479 0.0 549
MS.gene31670.t1 AT5G23810 47.640 445 224 5 19 458 21 461 3.09e-139 408
MS.gene31670.t1 AT5G23810 50.932 322 151 4 19 337 21 338 8.33e-108 324
MS.gene31670.t1 AT5G23810 48.333 240 117 4 19 255 21 256 7.49e-71 226
MS.gene31670.t1 AT5G23810 49.505 202 97 3 19 217 21 220 1.31e-59 195
MS.gene31670.t1 AT5G23810 49.505 202 97 3 19 217 21 220 1.31e-59 195
MS.gene31670.t1 AT5G40780 29.938 481 271 14 10 466 5 443 6.97e-55 190
MS.gene31670.t1 AT1G24400 30.398 477 281 12 2 468 5 440 3.37e-53 185
MS.gene31670.t1 AT1G48640 30.515 485 277 13 3 468 9 452 8.01e-52 182
MS.gene31670.t1 AT5G40780 30.734 436 253 12 39 466 1 395 2.79e-50 176
MS.gene31670.t1 AT5G40780 30.734 436 253 12 39 466 1 395 2.79e-50 176
MS.gene31670.t1 AT1G67640 29.832 476 275 12 7 468 10 440 3.14e-47 169
MS.gene31670.t1 AT3G01760 28.387 465 281 12 12 463 16 441 5.23e-45 163
MS.gene31670.t1 AT1G61270 27.586 464 285 11 12 463 18 442 1.61e-43 159
MS.gene31670.t1 AT1G25530 29.274 468 261 14 4 458 16 426 7.15e-37 141
MS.gene31670.t1 AT1G71680 27.542 472 298 14 4 468 13 447 6.73e-36 138
MS.gene31670.t1 AT1G71680 30.556 324 204 9 22 342 33 338 1.47e-33 130
MS.gene31670.t1 AT1G08230 23.265 490 302 14 10 468 2 448 7.44e-25 107
MS.gene31670.t1 AT5G41800 23.517 472 310 16 15 471 14 449 4.18e-22 99.0
MS.gene31670.t1 AT2G39890 23.142 471 309 17 8 468 12 439 3.87e-18 87.0
MS.gene31670.t1 AT2G39890 23.142 471 309 17 8 468 12 439 3.87e-18 87.0
MS.gene31670.t1 AT2G39890 23.571 420 273 15 54 468 4 380 2.30e-17 84.3
MS.gene31670.t1 AT1G08230 25.949 316 205 9 159 468 56 348 3.22e-17 83.2
MS.gene31670.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene31670.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene31670.t1 AT1G08230 25.949 316 205 9 159 468 37 329 3.64e-17 82.8
MS.gene31670.t1 AT4G35180 24.043 470 295 14 13 459 37 467 5.84e-17 83.6
MS.gene31670.t1 AT2G36590 23.753 421 268 19 13 425 15 390 1.05e-16 82.4
MS.gene31670.t1 AT3G55740 23.077 429 264 18 54 468 60 436 1.07e-16 82.4
MS.gene31670.t1 AT3G55740 23.077 429 264 18 54 468 4 380 1.13e-16 82.0
MS.gene31670.t1 AT3G55740 23.077 429 264 18 54 468 4 380 1.13e-16 82.0
MS.gene31670.t1 AT4G35180 27.273 275 170 8 13 274 37 294 3.70e-15 77.0
MS.gene31670.t1 AT1G47670 23.810 462 298 14 23 467 93 517 1.19e-14 76.6

Find 106 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCATTGCAGTTCACTTAAT+TGG 0.155939 1.1:+12101661 MS.gene31670:CDS
GCCCTCTACAAAGCCAAATA+TGG 0.189673 1.1:-12101922 None:intergenic
CCCATTCTTCAATGATTTCT+TGG 0.199015 1.1:+12102094 MS.gene31670:CDS
ATGAAGAGAGCAAGTTTAAT+TGG 0.201285 1.1:+12101502 MS.gene31670:CDS
CCAAGAGAGCTCATGGAAAT+TGG 0.207479 1.1:-12100943 None:intergenic
AATGATTTCTTGGGACTAAT+TGG 0.215440 1.1:+12102104 MS.gene31670:CDS
GTCCATGTGAATGAATATTT+TGG 0.215858 1.1:-12102194 None:intergenic
TCCTTAACTGGGGTCCAAAT+TGG 0.216889 1.1:+12101200 MS.gene31670:CDS
CAATTTGTTACCTGCAACTT+TGG 0.220958 1.1:-12101030 None:intergenic
GTCTTTGTCCAACCCATATT+TGG 0.233068 1.1:+12101909 MS.gene31670:CDS
CATGTGACAACATCCTTAAC+TGG 0.255703 1.1:+12101188 MS.gene31670:CDS
TTCTTAATGTACATTTCTAT+AGG 0.295334 1.1:-12102161 None:intergenic
GCTATGAATATTCCACTATA+TGG 0.304768 1.1:+12101993 MS.gene31670:CDS
AAGAAGAGTGGAAGTGAAAT+AGG 0.305312 1.1:-12099386 None:intergenic
CCTTAACTGGGGTCCAAATT+GGG 0.308636 1.1:+12101201 MS.gene31670:CDS
CCATTCTTCAATGATTTCTT+GGG 0.308680 1.1:+12102095 MS.gene31670:CDS
GCACAAATGGGTTGGGTTGC+TGG 0.310749 1.1:+12099331 MS.gene31670:CDS
ATAACGGCTGTGATTGGTTC+TGG 0.315179 1.1:+12099283 MS.gene31670:CDS
ATAGGGAAGTAAACGGTTAA+TGG 0.315363 1.1:-12102143 None:intergenic
GCATTGCAGTTCACTTAATT+GGG 0.317175 1.1:+12101662 MS.gene31670:CDS
ACCTTAGGTTATGCTGCATT+TGG 0.323218 1.1:+12101562 MS.gene31670:CDS
TTCTGGAGGGCTTGATTTCA+AGG 0.324342 1.1:-12101470 None:intergenic
CAGTAACATCTACCCCAATT+TGG 0.327211 1.1:-12101214 None:intergenic
GCTTATTCTTCCATTGGCCT+TGG 0.338456 1.1:+12100996 MS.gene31670:CDS
GCTCATGGAAATTGGGTATC+TGG 0.345385 1.1:-12100935 None:intergenic
CGTTCACCTGATCCTGTTCA+TGG 0.347145 1.1:+12099421 MS.gene31670:CDS
TTGGTTTCTATGAGCCCTTT+TGG 0.350564 1.1:+12101617 MS.gene31670:CDS
TGTGAAAGCAGTTTGATCTT+TGG 0.353809 1.1:-12100833 None:intergenic
CCCAATTTGGACCCCAGTTA+AGG 0.356669 1.1:-12101201 None:intergenic
GATATTAAGTTGGCTATGTT+TGG 0.356877 1.1:+12102226 MS.gene31670:CDS
CCATTCACAAATTTACTATC+TGG 0.358132 1.1:-12101963 None:intergenic
ATAGAAGCCCCGGAAAATTA+TGG 0.365124 1.1:+12098811 MS.gene31670:CDS
TGAATTACTTCAGAGTAATA+TGG 0.375520 1.1:+12102027 MS.gene31670:CDS
ACATTATAGCTTCCATATAG+TGG 0.375753 1.1:-12102005 None:intergenic
TCATTTGCTTATTCTTCCAT+TGG 0.380915 1.1:+12100990 MS.gene31670:CDS
AAAATTTCAGCTATGTGGTT+TGG 0.388210 1.1:+12100058 MS.gene31670:CDS
AATAACTGCATCAATTAGTA+TGG 0.389829 1.1:+12100121 MS.gene31670:CDS
AGCATGGGCAATTGCACAAA+TGG 0.391852 1.1:+12099318 MS.gene31670:CDS
CCAATTTCCATGAGCTCTCT+TGG 0.392720 1.1:+12100943 MS.gene31670:CDS
CTTTCCATAGCCAAAGTTGC+AGG 0.406579 1.1:+12101020 MS.gene31670:CDS
TATGTGCTATGTGGAACCTT+AGG 0.410854 1.1:+12101547 MS.gene31670:CDS
GCGCAGTATATAAATCTTGT+AGG 0.412631 1.1:+12100080 MS.gene31670:CDS
CCAAGAAATCATTGAAGAAT+GGG 0.415932 1.1:-12102094 None:intergenic
TAGTTCCTCTTGCCATGAAC+AGG 0.421639 1.1:-12099433 None:intergenic
ATTTCTATTATCTCAGCTGC+TGG 0.428223 1.1:+12102251 MS.gene31670:CDS
TCTTAATGTACATTTCTATA+GGG 0.430781 1.1:-12102160 None:intergenic
CCCAAGAAATCATTGAAGAA+TGG 0.431584 1.1:-12102095 None:intergenic
CATATTATAACGGCTGTGAT+TGG 0.431871 1.1:+12099277 MS.gene31670:CDS
GTAAACGGTTAATGGATAGA+AGG 0.436951 1.1:-12102135 None:intergenic
GGCAAAGTCTATTAGCCAAA+AGG 0.440455 1.1:-12101632 None:intergenic
GATGGACGAGCCAAGAGAAC+TGG 0.446781 1.1:+12098859 MS.gene31670:CDS
AATCCTGTGAGAAAATTTCC+TGG 0.449333 1.1:-12101595 None:intergenic
GGCAATTGCACAAATGGGTT+GGG 0.449599 1.1:+12099324 MS.gene31670:CDS
TCAGCTGCTGGATCAATTCA+AGG 0.457275 1.1:+12102263 MS.gene31670:CDS
TAATGTGCTCATTGAGATCC+AGG 0.457500 1.1:+12101301 MS.gene31670:CDS
CAAGAGAGCTCATGGAAATT+GGG 0.458498 1.1:-12100942 None:intergenic
GTTACCTGCAACTTTGGCTA+TGG 0.461223 1.1:-12101024 None:intergenic
CTCTTGCCATGAACAGGATC+AGG 0.468402 1.1:-12099427 None:intergenic
GGGCAATTGCACAAATGGGT+TGG 0.468496 1.1:+12099323 MS.gene31670:CDS
TTATGAAATACCAGTTCTCT+TGG 0.472142 1.1:-12098869 None:intergenic
TCACTTAATTGGGGCATACC+AGG 0.476849 1.1:+12101672 MS.gene31670:CDS
CCCATATTTGGCTTTGTAGA+GGG 0.481292 1.1:+12101921 MS.gene31670:CDS
CCCTCTACAAAGCCAAATAT+GGG 0.490888 1.1:-12101921 None:intergenic
GCAAAGTCTATTAGCCAAAA+GGG 0.493348 1.1:-12101631 None:intergenic
CATTTCTATAGGGAAGTAAA+CGG 0.499195 1.1:-12102150 None:intergenic
TGGAGGATGTTCCAAGCTAT+TGG 0.501682 1.1:+12101251 MS.gene31670:CDS
GGCAGAAAATTTCAGCTATG+TGG 0.510184 1.1:+12100053 MS.gene31670:CDS
TTGAGAGCCAAGAGAGCTCA+TGG 0.511375 1.1:-12100950 None:intergenic
CATGCAAAGATTATCATGAA+AGG 0.513368 1.1:-12100894 None:intergenic
CTTGGCTCAAGATATTAAGT+TGG 0.518945 1.1:+12102216 MS.gene31670:CDS
AGATGTTACTGCAACAGAAA+AGG 0.520611 1.1:+12101226 MS.gene31670:CDS
CCAGATAGTAAATTTGTGAA+TGG 0.520639 1.1:+12101963 MS.gene31670:CDS
AATATTCATTCACATGGACT+TGG 0.526623 1.1:+12102198 MS.gene31670:CDS
GCATGGGCAATTGCACAAAT+GGG 0.527749 1.1:+12099319 MS.gene31670:CDS
ATGCAAAGATTATCATGAAA+GGG 0.529495 1.1:-12100893 None:intergenic
ATGCGATGTCACCAATAGCT+TGG 0.532044 1.1:-12101262 None:intergenic
TCCAAATGCAGCATAACCTA+AGG 0.534958 1.1:-12101563 None:intergenic
TATCATTGTTCTCCTCTGAA+AGG 0.535151 1.1:-12102314 None:intergenic
TGCTAGTGCACATATTATAA+CGG 0.539503 1.1:+12099267 MS.gene31670:CDS
CATCATGCATATAGAAGCCC+CGG 0.546253 1.1:+12098801 None:intergenic
ACCCATATTTGGCTTTGTAG+AGG 0.550221 1.1:+12101920 MS.gene31670:CDS
TCAAACTGCTTTCACAAGCA+TGG 0.567315 1.1:+12100840 MS.gene31670:CDS
CTACAAAGCCAAATATGGGT+TGG 0.568932 1.1:-12101917 None:intergenic
CATTGCAGTTCACTTAATTG+GGG 0.570061 1.1:+12101663 MS.gene31670:CDS
CTGCAACTTTGGCTATGGAA+AGG 0.581563 1.1:-12101019 None:intergenic
TATGGAAAGGCCAAGGCCAA+TGG 0.581601 1.1:-12101006 None:intergenic
AATCTTGTAGGTGTGACCAT+TGG 0.583439 1.1:+12100092 MS.gene31670:CDS
CTTAACTGGGGTCCAAATTG+GGG 0.588022 1.1:+12101202 MS.gene31670:CDS
CTGATCCTGTTCATGGCAAG+AGG 0.588105 1.1:+12099428 MS.gene31670:CDS
ATGTGACAACATCCTTAACT+GGG 0.597025 1.1:+12101189 MS.gene31670:CDS
GTGAACTGCAATGCAAACAT+TGG 0.597294 1.1:-12101653 None:intergenic
CAGCTGCTGGATCAATTCAA+GGG 0.598708 1.1:+12102264 MS.gene31670:CDS
TTGATGAATTTGAAGGGACA+TGG 0.601889 1.1:+12099239 MS.gene31670:intron
TGCCAAAATATTCATTCACA+TGG 0.602274 1.1:+12102192 MS.gene31670:CDS
GTAACAATCAGCAAGAAGAG+TGG 0.632602 1.1:-12099398 None:intergenic
CATGAACAGGATCAGGTGAA+CGG 0.635139 1.1:-12099420 None:intergenic
CTTTGGCTATGGAAAGGCCA+AGG 0.635651 1.1:-12101013 None:intergenic
GCATTTGGAAATGATGCACC+AGG 0.647793 1.1:+12101577 MS.gene31670:CDS
TTACTGCAACAGAAAAGGTG+TGG 0.655563 1.1:+12101231 MS.gene31670:CDS
CTGCAACAGAAAAGGTGTGG+AGG 0.661031 1.1:+12101234 MS.gene31670:CDS
TGCAGTTATTGTGTAGCCAA+TGG 0.661210 1.1:-12100108 None:intergenic
ATTGAAGAATGGGAACAACA+TGG 0.666871 1.1:-12102084 None:intergenic
AAGACATACAAACCTTTCAG+AGG 0.672597 1.1:+12102302 MS.gene31670:CDS
GAAGTTGTCAGAGCTAACCT+AGG 0.673566 1.1:+12099466 MS.gene31670:CDS
ATTACTTCAGAGTAATATGG+AGG 0.674777 1.1:+12102030 MS.gene31670:CDS
TGTGACAACATCCTTAACTG+GGG 0.742619 1.1:+12101190 MS.gene31670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATTAGAAGAA+AGG - chr1.1:12099113-12099132 None:intergenic 10.0%
!! AAGATAATTTATTTAATAAG+AGG + chr1.1:12100317-12100336 MS.gene31670:intron 10.0%
!! ATAAGATATTAATTAACTAT+AGG - chr1.1:12101084-12101103 None:intergenic 10.0%
!! TAAGATATTAATTAACTATA+GGG - chr1.1:12101083-12101102 None:intergenic 10.0%
!!! AAACATTTTATCAAAATAAA+TGG - chr1.1:12098971-12098990 None:intergenic 10.0%
!!! AAATACACATTTTTATATAT+TGG + chr1.1:12099158-12099177 MS.gene31670:intron 10.0%
!!! ATTAATTTGTAAGATTTAAA+TGG - chr1.1:12101367-12101386 None:intergenic 10.0%
!!! ATTATTTACTGATTTATATA+TGG + chr1.1:12101331-12101350 MS.gene31670:intron 10.0%
!!! ATTCATATTTTTTTTTGAAA+GGG + chr1.1:12100675-12100694 MS.gene31670:intron 10.0%
!!! GGTTAAATTATTAATATTTT+AGG - chr1.1:12101716-12101735 None:intergenic 10.0%
!!! TATTCATATTTTTTTTTGAA+AGG + chr1.1:12100674-12100693 MS.gene31670:intron 10.0%
!!! TTCTTCTAATTTTTTTTTTT+TGG + chr1.1:12099113-12099132 MS.gene31670:intron 10.0%
!! AATAATTAACTAATAAAACC+AGG - chr1.1:12099910-12099929 None:intergenic 15.0%
!! ATAAATATTAGGCAATAATT+AGG - chr1.1:12099776-12099795 None:intergenic 15.0%
!! ATCTGATTTACAAATTTAAA+CGG + chr1.1:12101817-12101836 MS.gene31670:intron 15.0%
!! ATGAAAACAAAAAATTGATT+AGG - chr1.1:12100797-12100816 None:intergenic 15.0%
!! ATTCATCTAGTATAAATATT+AGG - chr1.1:12099787-12099806 None:intergenic 15.0%
!! ATTTATAATTAGAGATAAAG+CGG - chr1.1:12099142-12099161 None:intergenic 15.0%
!! TAAAAATGGTTGAATTAATT+GGG - chr1.1:12100720-12100739 None:intergenic 15.0%
!! TAAATATTAGGCAATAATTA+GGG - chr1.1:12099775-12099794 None:intergenic 15.0%
!! TATACTAAAAATAGTTGAAT+AGG + chr1.1:12100368-12100387 MS.gene31670:intron 15.0%
!! TTAATTATGTATGTGATATA+TGG + chr1.1:12099209-12099228 MS.gene31670:intron 15.0%
!!! ACTCTTTTTTTTTTTTTTTG+AGG + chr1.1:12100457-12100476 MS.gene31670:intron 15.0%
!!! ATATATGTTTTCTTATTTCA+AGG - chr1.1:12099080-12099099 None:intergenic 15.0%
!!! ATTCAACTATTTTTAGTATA+AGG - chr1.1:12100368-12100387 None:intergenic 15.0%
!!! CTCTTTTTTTTTTTTTTTGA+GGG + chr1.1:12100458-12100477 MS.gene31670:intron 15.0%
!!! TTTGTTTTCATTATTTATCA+GGG + chr1.1:12100806-12100825 MS.gene31670:intron 15.0%
!!! TTTTGTTTTCATTATTTATC+AGG + chr1.1:12100805-12100824 MS.gene31670:intron 15.0%
!! AAAAATGGTTGAATTAATTG+GGG - chr1.1:12100719-12100738 None:intergenic 20.0%
!! AAAATCATGTGACAAATTAA+TGG - chr1.1:12100022-12100041 None:intergenic 20.0%
!! AAACTCAATAGTAATAAACA+TGG - chr1.1:12098898-12098917 None:intergenic 20.0%
!! AAATTACAAGTAAAATTGAG+AGG - chr1.1:12101794-12101813 None:intergenic 20.0%
!! AAGTTATTTATTTAGTACCT+AGG - chr1.1:12099486-12099505 None:intergenic 20.0%
!! ATCTTATATTAAAATGGTCA+TGG + chr1.1:12101097-12101116 MS.gene31670:intron 20.0%
!! ATTAACATGCAACATAAAAA+TGG - chr1.1:12099519-12099538 None:intergenic 20.0%
!! CTAAAAATGGTTGAATTAAT+TGG - chr1.1:12100721-12100740 None:intergenic 20.0%
!! GTTAATGTTTAAGTAGTTTA+AGG + chr1.1:12099533-12099552 MS.gene31670:intron 20.0%
!! TCACTTTAAGTAAAATTTCA+AGG - chr1.1:12099673-12099692 None:intergenic 20.0%
!! TCTTAATGTACATTTCTATA+GGG - chr1.1:12102163-12102182 None:intergenic 20.0%
!! TTCTTAATGTACATTTCTAT+AGG - chr1.1:12102164-12102183 None:intergenic 20.0%
!!! GAAACAATTATATTTTGTGT+TGG - chr1.1:12099934-12099953 None:intergenic 20.0%
!!! GTAATTCAATTTTTTAGTAG+TGG - chr1.1:12100606-12100625 None:intergenic 20.0%
!!! TCACTTCAACTATATTTTTT+TGG + chr1.1:12101055-12101074 MS.gene31670:intron 20.0%
!!! TCGTTTTAATATTTTAGTAG+AGG + chr1.1:12099596-12099615 MS.gene31670:intron 20.0%
!!! TGAAATTTTACTTAAAGTGA+TGG + chr1.1:12099673-12099692 MS.gene31670:intron 20.0%
!!! TTAAAACGATTTTCAAGTTT+CGG - chr1.1:12099585-12099604 None:intergenic 20.0%
!!! TTTGATTTGATGAATTTGAA+GGG + chr1.1:12099233-12099252 MS.gene31670:intron 20.0%
!!! TTTTGATTTGATGAATTTGA+AGG + chr1.1:12099232-12099251 MS.gene31670:intron 20.0%
! AATAACTGCATCAATTAGTA+TGG + chr1.1:12100121-12100140 MS.gene31670:CDS 25.0%
! ATCTTCAAACATTGACAAAA+AGG - chr1.1:12101159-12101178 None:intergenic 25.0%
! ATGCAAAGATTATCATGAAA+GGG - chr1.1:12100896-12100915 None:intergenic 25.0%
! CGTATGTGTAAATATGTTTA+AGG + chr1.1:12100178-12100197 MS.gene31670:intron 25.0%
! TAGTTTATATGTACTATTGC+AGG + chr1.1:12101444-12101463 MS.gene31670:intron 25.0%
! TCGTAAGTTATTTATTTACC+TGG - chr1.1:12101693-12101712 None:intergenic 25.0%
! TGAATTACTTCAGAGTAATA+TGG + chr1.1:12102027-12102046 MS.gene31670:CDS 25.0%
!! TTGATCATCACTTCTAAAAA+TGG - chr1.1:12100734-12100753 None:intergenic 25.0%
!! TTTTGTCAATGTTTGAAGAT+GGG + chr1.1:12101159-12101178 MS.gene31670:intron 25.0%
!! TTTTTGTCAATGTTTGAAGA+TGG + chr1.1:12101158-12101177 MS.gene31670:intron 25.0%
!!! ACATTATTTTATGTGCTATG+TGG + chr1.1:12101538-12101557 MS.gene31670:CDS 25.0%
!!! GTAATGTTTTAGAGCATTTT+TGG + chr1.1:12100390-12100409 MS.gene31670:intron 25.0%
AAAATTTCAGCTATGTGGTT+TGG + chr1.1:12100058-12100077 MS.gene31670:CDS 30.0%
AACAAAGTCATAGTGTACTA+TGG - chr1.1:12100434-12100453 None:intergenic 30.0%
AATATTCATTCACATGGACT+TGG + chr1.1:12102198-12102217 MS.gene31670:CDS 30.0%
AATGATTTCTTGGGACTAAT+TGG + chr1.1:12102104-12102123 MS.gene31670:CDS 30.0%
ACATTATAGCTTCCATATAG+TGG - chr1.1:12102008-12102027 None:intergenic 30.0%
ATGAAGAGAGCAAGTTTAAT+TGG + chr1.1:12101502-12101521 MS.gene31670:CDS 30.0%
ATTACTTCAGAGTAATATGG+AGG + chr1.1:12102030-12102049 MS.gene31670:CDS 30.0%
CAAGATGTCTATAGAATCAT+TGG - chr1.1:12099831-12099850 None:intergenic 30.0%
CAGTAAATAATTTACTTGCC+TGG - chr1.1:12101322-12101341 None:intergenic 30.0%
CATGCAAAGATTATCATGAA+AGG - chr1.1:12100897-12100916 None:intergenic 30.0%
CATTTCTATAGGGAAGTAAA+CGG - chr1.1:12102153-12102172 None:intergenic 30.0%
CCAAGAAATCATTGAAGAAT+GGG - chr1.1:12102097-12102116 None:intergenic 30.0%
CCAGATAGTAAATTTGTGAA+TGG + chr1.1:12101963-12101982 MS.gene31670:CDS 30.0%
CCATTCACAAATTTACTATC+TGG - chr1.1:12101966-12101985 None:intergenic 30.0%
CCATTCTTCAATGATTTCTT+GGG + chr1.1:12102095-12102114 MS.gene31670:CDS 30.0%
GAATTAATTGGGGTAGAAAT+TGG - chr1.1:12100709-12100728 None:intergenic 30.0%
GCTATGAATATTCCACTATA+TGG + chr1.1:12101993-12102012 MS.gene31670:CDS 30.0%
TCATTTGCTTATTCTTCCAT+TGG + chr1.1:12100990-12101009 MS.gene31670:CDS 30.0%
TGCCAAAATATTCATTCACA+TGG + chr1.1:12102192-12102211 MS.gene31670:CDS 30.0%
TGCTAGTGCACATATTATAA+CGG + chr1.1:12099267-12099286 MS.gene31670:CDS 30.0%
TTATGAAATACCAGTTCTCT+TGG - chr1.1:12098872-12098891 None:intergenic 30.0%
TTTGTCAATGTTTGAAGATG+GGG + chr1.1:12101160-12101179 MS.gene31670:intron 30.0%
! ACATGATTTTCTTTGATAGG+AGG + chr1.1:12100032-12100051 MS.gene31670:intron 30.0%
! GTCACATGATTTTCTTTGAT+AGG + chr1.1:12100029-12100048 MS.gene31670:intron 30.0%
! GTCCATGTGAATGAATATTT+TGG - chr1.1:12102197-12102216 None:intergenic 30.0%
!! GATATTAAGTTGGCTATGTT+TGG + chr1.1:12102226-12102245 MS.gene31670:CDS 30.0%
!! GTTTAAGGAAGTGTCTTATA+CGG + chr1.1:12099548-12099567 MS.gene31670:intron 30.0%
!! TACTTAGTCAAAAGTTGATG+AGG - chr1.1:12100158-12100177 None:intergenic 30.0%
!!! GAATGAATATTTTGGCATGT+TGG - chr1.1:12102189-12102208 None:intergenic 30.0%
AAGAAGAGTGGAAGTGAAAT+AGG - chr1.1:12099389-12099408 None:intergenic 35.0%
AAGACATACAAACCTTTCAG+AGG + chr1.1:12102302-12102321 MS.gene31670:CDS 35.0%
AATCCTGTGAGAAAATTTCC+TGG - chr1.1:12101598-12101617 None:intergenic 35.0%
AGATGTTACTGCAACAGAAA+AGG + chr1.1:12101226-12101245 MS.gene31670:CDS 35.0%
AGCTAATGTGTGATTTCCTA+TGG + chr1.1:12101882-12101901 MS.gene31670:intron 35.0%
ATAGGGAAGTAAACGGTTAA+TGG - chr1.1:12102146-12102165 None:intergenic 35.0%
ATGTGACAACATCCTTAACT+GGG + chr1.1:12101189-12101208 MS.gene31670:CDS 35.0%
ATGTGTGATTTCCTATGGTT+AGG + chr1.1:12101887-12101906 MS.gene31670:intron 35.0%
ATTAAGTGTCTCATCACATG+TGG - chr1.1:12099748-12099767 None:intergenic 35.0%
ATTGAAGAATGGGAACAACA+TGG - chr1.1:12102087-12102106 None:intergenic 35.0%
ATTTCTATTATCTCAGCTGC+TGG + chr1.1:12102251-12102270 MS.gene31670:CDS 35.0%
CATATTATAACGGCTGTGAT+TGG + chr1.1:12099277-12099296 MS.gene31670:CDS 35.0%
CATTGCAGTTCACTTAATTG+GGG + chr1.1:12101663-12101682 MS.gene31670:CDS 35.0%
CCCAAGAAATCATTGAAGAA+TGG - chr1.1:12102098-12102117 None:intergenic 35.0%
CCCATTCTTCAATGATTTCT+TGG + chr1.1:12102094-12102113 MS.gene31670:CDS 35.0%
CTTGGCTCAAGATATTAAGT+TGG + chr1.1:12102216-12102235 MS.gene31670:CDS 35.0%
GAAAATGCAAAAAGAACTGC+AGG - chr1.1:12099358-12099377 None:intergenic 35.0%
GCAAAGTCTATTAGCCAAAA+GGG - chr1.1:12101634-12101653 None:intergenic 35.0%
GCATTGCAGTTCACTTAATT+GGG + chr1.1:12101662-12101681 MS.gene31670:CDS 35.0%
GCGCAGTATATAAATCTTGT+AGG + chr1.1:12100080-12100099 MS.gene31670:CDS 35.0%
TGCATTGCAGTTCACTTAAT+TGG + chr1.1:12101661-12101680 MS.gene31670:CDS 35.0%
TGTGAAAGCAGTTTGATCTT+TGG - chr1.1:12100836-12100855 None:intergenic 35.0%
TTGATGAATTTGAAGGGACA+TGG + chr1.1:12099239-12099258 MS.gene31670:intron 35.0%
! GAAGTGTCTTATACGGTATA+TGG + chr1.1:12099555-12099574 MS.gene31670:intron 35.0%
! GGAAATTTTCTCACAGGATT+TGG + chr1.1:12101598-12101617 MS.gene31670:CDS 35.0%
! GTAAACGGTTAATGGATAGA+AGG - chr1.1:12102138-12102157 None:intergenic 35.0%
! GTTGAATCTTTTCATGTACC+TGG + chr1.1:12099889-12099908 MS.gene31670:intron 35.0%
!! CAATTTGTTACCTGCAACTT+TGG - chr1.1:12101033-12101052 None:intergenic 35.0%
!! TGGAGTTTTATCACTAGCAT+GGG + chr1.1:12099303-12099322 MS.gene31670:CDS 35.0%
AATCTTGTAGGTGTGACCAT+TGG + chr1.1:12100092-12100111 MS.gene31670:CDS 40.0%
ACCTTAGGTTATGCTGCATT+TGG + chr1.1:12101562-12101581 MS.gene31670:CDS 40.0%
AGGGCCAAAGCAAACAAAAA+TGG + chr1.1:12101940-12101959 MS.gene31670:CDS 40.0%
ATAGAAGCCCCGGAAAATTA+TGG + chr1.1:12098811-12098830 MS.gene31670:CDS 40.0%
CAAGAGAGCTCATGGAAATT+GGG - chr1.1:12100945-12100964 None:intergenic 40.0%
CAGTAACATCTACCCCAATT+TGG - chr1.1:12101217-12101236 None:intergenic 40.0%
CATGTGACAACATCCTTAAC+TGG + chr1.1:12101188-12101207 MS.gene31670:CDS 40.0%
CCCTCTACAAAGCCAAATAT+GGG - chr1.1:12101924-12101943 None:intergenic 40.0%
CTACAAAGCCAAATATGGGT+TGG - chr1.1:12101920-12101939 None:intergenic 40.0%
CTCACAGCTAATCAAATGTG+AGG - chr1.1:12099639-12099658 None:intergenic 40.0%
GGCAAAGTCTATTAGCCAAA+AGG - chr1.1:12101635-12101654 None:intergenic 40.0%
GGCAGAAAATTTCAGCTATG+TGG + chr1.1:12100053-12100072 MS.gene31670:CDS 40.0%
GTAACAATCAGCAAGAAGAG+TGG - chr1.1:12099401-12099420 None:intergenic 40.0%
GTCTTTGTCCAACCCATATT+TGG + chr1.1:12101909-12101928 MS.gene31670:CDS 40.0%
GTGAACTGCAATGCAAACAT+TGG - chr1.1:12101656-12101675 None:intergenic 40.0%
GTGTCTTATACGGTATATGG+TGG + chr1.1:12099558-12099577 MS.gene31670:intron 40.0%
TAATGTGCTCATTGAGATCC+AGG + chr1.1:12101301-12101320 MS.gene31670:CDS 40.0%
TATGTGCTATGTGGAACCTT+AGG + chr1.1:12101547-12101566 MS.gene31670:CDS 40.0%
TCAAACTGCTTTCACAAGCA+TGG + chr1.1:12100840-12100859 MS.gene31670:CDS 40.0%
TCCAAATGCAGCATAACCTA+AGG - chr1.1:12101566-12101585 None:intergenic 40.0%
TGCAGTTATTGTGTAGCCAA+TGG - chr1.1:12100111-12100130 None:intergenic 40.0%
TGTGACAACATCCTTAACTG+GGG + chr1.1:12101190-12101209 MS.gene31670:CDS 40.0%
TTACTGCAACAGAAAAGGTG+TGG + chr1.1:12101231-12101250 MS.gene31670:CDS 40.0%
TTGGACAAAGACCTAACCAT+AGG - chr1.1:12101901-12101920 None:intergenic 40.0%
! CTCTTCATCACTCTGTTTTC+TGG - chr1.1:12101490-12101509 None:intergenic 40.0%
! GTCGTCGAAGTTTTTGTCTT+CGG - chr1.1:12098839-12098858 None:intergenic 40.0%
! TCATCACTCTGTTTTCTGGA+GGG - chr1.1:12101486-12101505 None:intergenic 40.0%
! TCGTCGAAGTTTTTGTCTTC+GGG - chr1.1:12098838-12098857 None:intergenic 40.0%
! TTCATCACTCTGTTTTCTGG+AGG - chr1.1:12101487-12101506 None:intergenic 40.0%
! TTGGTTTCTATGAGCCCTTT+TGG + chr1.1:12101617-12101636 MS.gene31670:CDS 40.0%
! TTTGATTAGCTGTGAGTGCA+CGG + chr1.1:12099643-12099662 MS.gene31670:intron 40.0%
!! ACCCATATTTGGCTTTGTAG+AGG + chr1.1:12101920-12101939 MS.gene31670:CDS 40.0%
!! CCCATATTTGGCTTTGTAGA+GGG + chr1.1:12101921-12101940 MS.gene31670:CDS 40.0%
!! CTGGAGTTTTATCACTAGCA+TGG + chr1.1:12099302-12099321 MS.gene31670:CDS 40.0%
!!! CTGGCCATTTTTGTTTGCTT+TGG - chr1.1:12101947-12101966 None:intergenic 40.0%
AGCATGGGCAATTGCACAAA+TGG + chr1.1:12099318-12099337 MS.gene31670:CDS 45.0%
ATGCGATGTCACCAATAGCT+TGG - chr1.1:12101265-12101284 None:intergenic 45.0%
CAGCTGCTGGATCAATTCAA+GGG + chr1.1:12102264-12102283 MS.gene31670:CDS 45.0%
CATGAACAGGATCAGGTGAA+CGG - chr1.1:12099423-12099442 None:intergenic 45.0%
CCAAGAGAGCTCATGGAAAT+TGG - chr1.1:12100946-12100965 None:intergenic 45.0%
CCAATTTCCATGAGCTCTCT+TGG + chr1.1:12100943-12100962 MS.gene31670:CDS 45.0%
CCTTAACTGGGGTCCAAATT+GGG + chr1.1:12101201-12101220 MS.gene31670:CDS 45.0%
CTGCAACTTTGGCTATGGAA+AGG - chr1.1:12101022-12101041 None:intergenic 45.0%
CTTAACTGGGGTCCAAATTG+GGG + chr1.1:12101202-12101221 MS.gene31670:CDS 45.0%
CTTTCCATAGCCAAAGTTGC+AGG + chr1.1:12101020-12101039 MS.gene31670:CDS 45.0%
GAAGTTGTCAGAGCTAACCT+AGG + chr1.1:12099466-12099485 MS.gene31670:CDS 45.0%
GACAAAAACTTCGACGACGA+TGG + chr1.1:12098841-12098860 MS.gene31670:CDS 45.0%
GCATGGGCAATTGCACAAAT+GGG + chr1.1:12099319-12099338 MS.gene31670:CDS 45.0%
GCATTTGGAAATGATGCACC+AGG + chr1.1:12101577-12101596 MS.gene31670:CDS 45.0%
GCCCTCTACAAAGCCAAATA+TGG - chr1.1:12101925-12101944 None:intergenic 45.0%
GCTCATGGAAATTGGGTATC+TGG - chr1.1:12100938-12100957 None:intergenic 45.0%
GTTACCTGCAACTTTGGCTA+TGG - chr1.1:12101027-12101046 None:intergenic 45.0%
TAGTTCCTCTTGCCATGAAC+AGG - chr1.1:12099436-12099455 None:intergenic 45.0%
TCACTTAATTGGGGCATACC+AGG + chr1.1:12101672-12101691 MS.gene31670:CDS 45.0%
TCAGCTGCTGGATCAATTCA+AGG + chr1.1:12102263-12102282 MS.gene31670:CDS 45.0%
TCCTTAACTGGGGTCCAAAT+TGG + chr1.1:12101200-12101219 MS.gene31670:CDS 45.0%
TGGAGGATGTTCCAAGCTAT+TGG + chr1.1:12101251-12101270 MS.gene31670:CDS 45.0%
! ATAACGGCTGTGATTGGTTC+TGG + chr1.1:12099283-12099302 MS.gene31670:CDS 45.0%
! CGTCGAAGTTTTTGTCTTCG+GGG - chr1.1:12098837-12098856 None:intergenic 45.0%
! GCACCAGGAAATTTTCTCAC+AGG + chr1.1:12101592-12101611 MS.gene31670:CDS 45.0%
! GCTTATTCTTCCATTGGCCT+TGG + chr1.1:12100996-12101015 MS.gene31670:CDS 45.0%
! GGCAATTGCACAAATGGGTT+GGG + chr1.1:12099324-12099343 MS.gene31670:CDS 45.0%
! TCTTCGGGGCCATAATTTTC+CGG - chr1.1:12098823-12098842 None:intergenic 45.0%
! TTCTGGAGGGCTTGATTTCA+AGG - chr1.1:12101473-12101492 None:intergenic 45.0%
!! ATAAATATTTAAATAAAGTA+AGG - chr1.1:12101737-12101756 None:intergenic 5.0%
!! ATTAATATCTTATATTAAAA+TGG + chr1.1:12101091-12101110 MS.gene31670:intron 5.0%
CCCAATTTGGACCCCAGTTA+AGG - chr1.1:12101204-12101223 None:intergenic 50.0%
CGTTCACCTGATCCTGTTCA+TGG + chr1.1:12099421-12099440 MS.gene31670:CDS 50.0%
CTCTTGCCATGAACAGGATC+AGG - chr1.1:12099430-12099449 None:intergenic 50.0%
CTGATCCTGTTCATGGCAAG+AGG + chr1.1:12099428-12099447 MS.gene31670:CDS 50.0%
CTTTGGCTATGGAAAGGCCA+AGG - chr1.1:12101016-12101035 None:intergenic 50.0%
GGGCAATTGCACAAATGGGT+TGG + chr1.1:12099323-12099342 MS.gene31670:CDS 50.0%
TATGGAAAGGCCAAGGCCAA+TGG - chr1.1:12101009-12101028 None:intergenic 50.0%
TTGAGAGCCAAGAGAGCTCA+TGG - chr1.1:12100953-12100972 None:intergenic 50.0%
! CTGCAACAGAAAAGGTGTGG+AGG + chr1.1:12101234-12101253 MS.gene31670:CDS 50.0%
! CTTCGGGGCCATAATTTTCC+GGG - chr1.1:12098822-12098841 None:intergenic 50.0%
! TTCGGGGCCATAATTTTCCG+GGG - chr1.1:12098821-12098840 None:intergenic 50.0%
GATGGACGAGCCAAGAGAAC+TGG + chr1.1:12098859-12098878 MS.gene31670:CDS 55.0%
! GATTAGCTGTGAGTGCACGG+AGG + chr1.1:12099646-12099665 MS.gene31670:intron 55.0%
!! GCACAAATGGGTTGGGTTGC+TGG + chr1.1:12099331-12099350 MS.gene31670:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 12098805 12102334 12098805 ID=MS.gene31670
chr1.1 mRNA 12098805 12102334 12098805 ID=MS.gene31670.t1;Parent=MS.gene31670
chr1.1 exon 12098805 12098880 12098805 ID=MS.gene31670.t1.exon1;Parent=MS.gene31670.t1
chr1.1 CDS 12098805 12098880 12098805 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12099254 12099487 12099254 ID=MS.gene31670.t1.exon2;Parent=MS.gene31670.t1
chr1.1 CDS 12099254 12099487 12099254 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12100051 12100144 12100051 ID=MS.gene31670.t1.exon3;Parent=MS.gene31670.t1
chr1.1 CDS 12100051 12100144 12100051 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12100827 12101041 12100827 ID=MS.gene31670.t1.exon4;Parent=MS.gene31670.t1
chr1.1 CDS 12100827 12101041 12100827 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12101177 12101322 12101177 ID=MS.gene31670.t1.exon5;Parent=MS.gene31670.t1
chr1.1 CDS 12101177 12101322 12101177 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12101466 12101693 12101466 ID=MS.gene31670.t1.exon6;Parent=MS.gene31670.t1
chr1.1 CDS 12101466 12101693 12101466 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
chr1.1 exon 12101909 12102334 12101909 ID=MS.gene31670.t1.exon7;Parent=MS.gene31670.t1
chr1.1 CDS 12101909 12102334 12101909 ID=cds.MS.gene31670.t1;Parent=MS.gene31670.t1
Gene Sequence

>MS.gene31670

ATGCATATAGAAGCCCCGGAAAATTATGGCCCCGAAGACAAAAACTTCGACGACGATGGACGAGCCAAGAGAACTGGTATTTCATAAGTACCATGTTTATTACTATTGAGTTTGATGCGCATATGACAACATAACATAAACATATTCAAATACTATTATGAAACCATTTATTTTGATAAAATGTTTTATGTTATAGTTTTTTCGTTCTAAATTTTAATTTTGAAATTTTCACTTTGTTTTTCAAAAATTTGTACAATTTCTTTTCTTCAAATCCTTGAAATAAGAAAACATATATATATATTAAACCTTTCTTCTAATTTTTTTTTTTTGGTTACCGCTTTATCTCTAATTATAAATACACATTTTTATATATTGGTAATATTTTTTATTGTATTAATTTTTCTTTAATTATGTATGTGATATATGGTTTTGATTTGATGAATTTGAAGGGACATGGTTGACTGCTAGTGCACATATTATAACGGCTGTGATTGGTTCTGGAGTTTTATCACTAGCATGGGCAATTGCACAAATGGGTTGGGTTGCTGGTCCTGCAGTTCTTTTTGCATTTTCTTTCATTACCTATTTCACTTCCACTCTTCTTGCTGATTGTTACCGTTCACCTGATCCTGTTCATGGCAAGAGGAACTACACTTACACTGAAGTTGTCAGAGCTAACCTAGGTACTAAATAAATAACTTTACTATATAACCATTTTTATGTTGCATGTTAATGTTTAAGTAGTTTAAGGAAGTGTCTTATACGGTATATGGTGGACCGAAACTTGAAAATCGTTTTAATATTTTAGTAGAGGCTTATGATATTACTCGTCCTCACATTTGATTAGCTGTGAGTGCACGGAGGACCTTGAAATTTTACTTAAAGTGATGGCAATTATTGTTATCGAAATTTTGAGCAATTTTTAAATATCGATTGTAGACCACATGTGATGAGACACTTAATCATACCCTAATTATTGCCTAATATTTATACTAGATGAATTCATAACAGCTTGTTTGATTACCAATGATTCTATAGACATCTTGTATTATAAAAAAATTGTAGAAACTTGAGACTCTCTGTTGTTGAATCTTTTCATGTACCTGGTTTTATTAGTTAATTATTTCCAACACAAAATATAATTGTTTCTTGTATGTTCTTAGCTAGTTTAAGAAATAATTCAATTTTTTTATTAAATTGATAAAAATAGCTCACCATTAATTTGTCACATGATTTTCTTTGATAGGAGGCAGAAAATTTCAGCTATGTGGTTTGGCGCAGTATATAAATCTTGTAGGTGTGACCATTGGCTACACAATAACTGCATCAATTAGTATGGTGTAAGTTTTTCCTCATCAACTTTTGACTAAGTACGTATGTGTAAATATGTTTAAGGTTCTTGATGAAACAATTGATTATTTATAAATTGTAGATATTATATTTAAGTACAACAATATACTAAAAGCATTTTAGTAAGTGTGAAGATTTCTGAATTCTCAATAAAAAAGTGAGAAGATAATTTATTTAATAAGAGGAAGAATATCAAGAGAATTTTATGTACCTTATACTAAAAATAGTTGAATAGGTAATGTTTTAGAGCATTTTTGGAATATTAGTTTGACAAAACCATAGTACACTATGACTTTGTTGAAACTCTTTTTTTTTTTTTTTGAGGGAACTTTGTTGAAACTCTATAAAGTCTAACTTTTACAAAAAAAAAAAAATAGTAGTAGTTCACTGTGATTCTTCGAAATTCATCATCAATTCAAACGTACACTAAGTAGAATCGATAAGTTCACCACTACTAAAAAATTGAATTACTGACAATATTTTTTTTTTGACAAAATTGAAAAAAAAAAGAATTTGTTTTATTCATATTTTTTTTTGAAAGGGACTTGTATCCAATTTCTACCCCAATTAATTCAACCATTTTTAGAAGTGATGATCAAATAAGAAATACACTGAATTGACAAAATTACATCATATAATCCTAATCAATTTTTTGTTTTCATTATTTATCAGGGCTGTCCAAAGATCAAACTGCTTTCACAAGCATGGACATCAAGACAAGTGCTATGTTTCAAATAACCCTTTCATGATAATCTTTGCATGCATTCAAATTGTTCTATGCCAGATACCCAATTTCCATGAGCTCTCTTGGCTCTCAATTGTTGCAGCAGTTATGTCATTTGCTTATTCTTCCATTGGCCTTGGCCTTTCCATAGCCAAAGTTGCAGGTAACAAATTGCATCACTTCAACTATATTTTTTTGGTACCCTATAGTTAATTAATATCTTATATTAAAATGGTCATGGTCTTCAATTTCACATTATTAAATAATAATAATAATTCCTTTTTGTCAATGTTTGAAGATGGGGATAATCATGTGACAACATCCTTAACTGGGGTCCAAATTGGGGTAGATGTTACTGCAACAGAAAAGGTGTGGAGGATGTTCCAAGCTATTGGTGACATCGCATTTGCTTATGCTTTTTCTAATGTGCTCATTGAGATCCAGGCAAGTAAATTATTTACTGATTTATATATGGTTTAAATATACCATTTAAATCTTACAAATTAATATATCACTTTTTATTTTTAGTTTATATAAAAAATTATTTTTAGTTTATATAAAAAATTAGTTTATATGTACTATTGCAGGATACCTTGAAATCAAGCCCTCCAGAAAACAGAGTGATGAAGAGAGCAAGTTTAATTGGAATTTTGACTACAACATTATTTTATGTGCTATGTGGAACCTTAGGTTATGCTGCATTTGGAAATGATGCACCAGGAAATTTTCTCACAGGATTTGGTTTCTATGAGCCCTTTTGGCTAATAGACTTTGCCAATGTTTGCATTGCAGTTCACTTAATTGGGGCATACCAGGTAAATAAATAACTTACGACCTAAAATATTAATAATTTAACCTTACTTTATTTAAATATTTATTAACAAAATAATTTTTTTAAAATAAAATCAAACACCTCTCAATTTTACTTGTAATTTTATATCTGATTTACAAATTTAAACGGAGTTGTCTGATCTTGATCTGAACGTTCGACATGTATGACTAAAGCTAATGTGTGATTTCCTATGGTTAGGTCTTTGTCCAACCCATATTTGGCTTTGTAGAGGGCCAAAGCAAACAAAAATGGCCAGATAGTAAATTTGTGAATGGAGAGCATGCTATGAATATTCCACTATATGGAAGCTATAATGTGAATTACTTCAGAGTAATATGGAGGAGTTGTTATGTGATTATCACTGCTATCATAGCCATGTTGTTCCCATTCTTCAATGATTTCTTGGGACTAATTGGTTCACTATCCTTCTATCCATTAACCGTTTACTTCCCTATAGAAATGTACATTAAGAAAACCAACATGCCAAAATATTCATTCACATGGACTTGGCTCAAGATATTAAGTTGGCTATGTTTGGTCATTTCTATTATCTCAGCTGCTGGATCAATTCAAGGGCTTGCAACATCACTCAAGACATACAAACCTTTCAGAGGAGAACAATGA
Protein sequence

>MS.gene31670.t1

MHIEAPENYGPEDKNFDDDGRAKRTGTWLTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYTEVVRANLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVQRSNCFHKHGHQDKCYVSNNPFMIIFACIQIVLCQIPNFHELSWLSIVAAVMSFAYSSIGLGLSIAKVADGDNHVTTSLTGVQIGVDVTATEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENRVMKRASLIGILTTTLFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFVQPIFGFVEGQSKQKWPDSKFVNGEHAMNIPLYGSYNVNYFRVIWRSCYVIITAIIAMLFPFFNDFLGLIGSLSFYPLTVYFPIEMYIKKTNMPKYSFTWTWLKILSWLCLVISIISAAGSIQGLATSLKTYKPFRGEQ