AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31688

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31688.t1 MTR_1g007150 96.345 684 6 4 1 665 1 684 0.0 1362
MS.gene31688.t1 MTR_3g110240 82.726 631 88 5 49 665 58 681 0.0 1095
MS.gene31688.t1 MTR_7g006030 80.314 574 103 2 97 664 29 598 0.0 996
MS.gene31688.t1 MTR_1g116210 78.735 569 116 2 97 664 111 675 0.0 975
MS.gene31688.t1 MTR_8g014050 77.778 576 117 3 97 665 120 691 0.0 938
MS.gene31688.t1 MTR_7g085540 75.567 573 131 2 97 664 139 707 0.0 933
MS.gene31688.t1 MTR_4g126010 38.828 273 156 5 105 374 9 273 5.74e-59 205
MS.gene31688.t1 MTR_2g099670 38.828 273 156 5 105 374 9 273 1.11e-58 205
MS.gene31688.t1 MTR_2g039930 38.462 273 157 5 105 374 9 273 1.55e-57 202
MS.gene31688.t1 MTR_1g075870 38.710 279 158 6 99 374 6 274 2.47e-56 194
MS.gene31688.t1 MTR_8g018310 37.828 267 154 6 105 368 9 266 4.72e-56 198
MS.gene31688.t1 MTR_7g097160 38.095 273 158 5 105 374 9 273 5.06e-56 197
MS.gene31688.t1 MTR_8g018310 37.828 267 154 6 105 368 9 266 8.43e-56 195
MS.gene31688.t1 MTR_1g042280 37.634 279 161 6 99 374 6 274 8.49e-56 197
MS.gene31688.t1 MTR_1g075870 38.710 279 158 6 99 374 6 274 9.82e-56 197
MS.gene31688.t1 MTR_1g069720 37.634 279 161 6 99 374 5 273 3.16e-54 192
MS.gene31688.t1 MTR_6g087070 37.363 273 160 5 105 374 9 273 8.41e-54 190
MS.gene31688.t1 MTR_1g004990 36.918 279 163 6 99 374 5 273 1.73e-53 189
MS.gene31688.t1 MTR_8g102930 37.276 279 162 6 99 374 5 273 3.56e-53 189
MS.gene31688.t1 MTR_3g110180 36.201 279 165 6 99 374 5 273 1.85e-52 187
MS.gene31688.t1 MTR_0492s0030 37.102 283 163 6 97 374 3 275 1.94e-52 185
MS.gene31688.t1 MTR_0543s0020 37.102 283 163 6 97 374 3 275 1.94e-52 185
MS.gene31688.t1 MTR_3g110180 36.201 279 164 7 99 374 5 272 8.95e-51 182
MS.gene31688.t1 MTR_1g042280 39.381 226 131 3 152 374 20 242 4.96e-50 177
MS.gene31688.t1 MTR_2g099670 39.437 213 123 3 165 374 12 221 3.34e-47 172
MS.gene31688.t1 MTR_1g075870 39.269 219 127 3 159 374 2 217 7.87e-47 167
MS.gene31688.t1 MTR_2g039930 38.974 195 113 3 183 374 1 192 7.85e-41 154
MS.gene31688.t1 MTR_1g116205 83.871 62 9 1 97 157 111 172 3.13e-28 111
MS.gene31688.t1 MTR_7g097160 41.985 131 72 2 247 374 25 154 2.04e-26 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31688.t1 AT2G25760 75.877 684 132 9 3 665 2 673 0.0 1073
MS.gene31688.t1 AT2G25760 75.255 687 134 10 3 665 2 676 0.0 1064
MS.gene31688.t1 AT3G13670 67.668 699 177 6 2 665 19 703 0.0 983
MS.gene31688.t1 AT3G03940 75.916 573 129 2 97 664 132 700 0.0 946
MS.gene31688.t1 AT5G18190 74.520 573 137 2 97 664 122 690 0.0 930
MS.gene31688.t1 AT5G18190 74.520 573 137 2 97 664 122 690 0.0 930
MS.gene31688.t1 AT3G03930 71.250 240 69 0 425 664 48 287 2.00e-123 368
MS.gene31688.t1 AT2G19470 38.828 273 156 5 105 374 9 273 3.26e-58 202
MS.gene31688.t1 AT5G57015 38.095 273 158 5 105 374 9 273 7.30e-58 202
MS.gene31688.t1 AT4G26100 38.095 273 158 5 105 374 9 273 8.07e-58 202
MS.gene31688.t1 AT3G23340 38.710 279 158 6 99 374 5 273 9.27e-58 202
MS.gene31688.t1 AT4G14340 38.710 279 158 6 99 374 11 279 6.31e-57 197
MS.gene31688.t1 AT1G03930 37.993 279 160 6 99 374 5 273 6.49e-57 200
MS.gene31688.t1 AT4G14340 38.710 279 158 6 99 374 11 279 1.07e-56 199
MS.gene31688.t1 AT1G72710 38.462 273 156 6 105 374 9 272 6.07e-56 197
MS.gene31688.t1 AT5G44100 36.918 279 163 6 99 374 5 273 1.19e-55 197
MS.gene31688.t1 AT5G44100 36.918 279 163 6 99 374 5 273 1.19e-55 197
MS.gene31688.t1 AT4G28540 37.276 279 162 6 99 374 9 277 1.52e-55 197
MS.gene31688.t1 AT5G43320 37.276 279 162 6 99 374 5 273 6.02e-54 192
MS.gene31688.t1 AT4G28880 37.276 279 162 6 99 374 5 273 9.96e-54 190
MS.gene31688.t1 AT4G28880 37.276 279 162 6 99 374 5 273 9.96e-54 190
MS.gene31688.t1 AT4G28880 37.276 279 162 6 99 374 5 273 9.96e-54 190
MS.gene31688.t1 AT4G28880 37.276 279 162 6 99 374 5 273 9.96e-54 190
MS.gene31688.t1 AT4G28860 37.276 279 162 6 99 374 5 273 1.61e-53 188
MS.gene31688.t1 AT5G43320 37.276 279 162 6 99 374 5 273 2.17e-53 188
MS.gene31688.t1 AT5G43320 37.276 279 162 6 99 374 5 273 2.17e-53 188
MS.gene31688.t1 AT4G28860 37.276 279 162 6 99 374 5 273 2.58e-53 189
MS.gene31688.t1 AT1G04440 36.559 279 164 6 99 374 5 273 7.35e-53 189
MS.gene31688.t1 AT3G23340 38.314 261 150 5 117 374 7 259 3.24e-51 184
MS.gene31688.t1 AT4G08800 33.333 273 139 6 105 374 9 241 6.20e-42 154

Find 174 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATATTTGGCATAATT+TGG 0.158062 1.1:+12276640 None:intergenic
CTGAGCACCGTCAGTGTTTA+TGG 0.167427 1.1:+12276576 None:intergenic
CCCATTCTGACTTTCTTCTT+TGG 0.171287 1.1:+12276399 None:intergenic
CTCACGTGCCGGAACAAATT+AGG 0.172612 1.1:-12279442 MS.gene31688:CDS
ATATTCTTGGCCCTAGTTTA+TGG 0.174994 1.1:-12277980 MS.gene31688:CDS
TAACCTTTGGGCACTGATTA+TGG 0.191586 1.1:-12276146 MS.gene31688:CDS
ATCGAAAAGTGATATATATT+TGG 0.208565 1.1:+12276630 None:intergenic
AGAATGCATCTTCTCTAATA+TGG 0.254263 1.1:+12277777 None:intergenic
TGCTGTTAAGCTTATTTATC+AGG 0.256618 1.1:-12276472 MS.gene31688:intron
CTACCTCGTGTAGCGGGTTC+GGG 0.258671 1.1:+12279557 None:intergenic
ACCAGTAAAGGGTGTAATTA+TGG 0.259169 1.1:-12278279 MS.gene31688:CDS
TTCTGATAAGCAAGAGATTA+TGG 0.259548 1.1:-12279417 MS.gene31688:CDS
TAGGTTGTTGTTCTAACCTT+TGG 0.265781 1.1:-12276159 MS.gene31688:CDS
TCCATAATTACACCCTTTAC+TGG 0.271957 1.1:+12278278 None:intergenic
TCGGGTTTAGCGATCGGGTT+CGG 0.281544 1.1:+12279575 None:intergenic
TCTTGTTTGCAAGAAGAAAA+TGG 0.283561 1.1:-12276752 MS.gene31688:CDS
GCCCTAGTTTATGGGATGTT+TGG 0.283968 1.1:-12277971 MS.gene31688:CDS
GAAGAAAACCTTTGCTTCAT+AGG 0.289095 1.1:+12276333 None:intergenic
TTGTTTGTATGTAGTGTATT+AGG 0.289760 1.1:-12278162 MS.gene31688:intron
ATGGGTCTAATGTCTGGATT+TGG 0.294234 1.1:+12276595 None:intergenic
TTTCTGGTTGATCTTGGTTT+AGG 0.301281 1.1:-12277271 MS.gene31688:intron
TCTACCTCGTGTAGCGGGTT+CGG 0.313908 1.1:+12279556 None:intergenic
TATTCTTGGCCCTAGTTTAT+GGG 0.314228 1.1:-12277979 MS.gene31688:CDS
CGGGTTTAGCGATCGGGTTC+GGG 0.318336 1.1:+12279576 None:intergenic
TCACGTGCCGGAACAAATTA+GGG 0.325179 1.1:-12279441 MS.gene31688:CDS
TGAGCACCGTCAGTGTTTAT+GGG 0.331178 1.1:+12276577 None:intergenic
AAGCTAGGGAAAGGAGGTTT+TGG 0.342457 1.1:-12279143 MS.gene31688:CDS
ATCAACGTCCAGATGTATTT+AGG 0.344411 1.1:-12277094 MS.gene31688:intron
TATAAGATTGCTGCAAGTAT+TGG 0.346054 1.1:+12275651 None:intergenic
ACACTAATCCATTGTGTTGC+TGG 0.346898 1.1:+12276372 None:intergenic
TTGCAGGTCATGGATATTCT+TGG 0.355219 1.1:-12277993 MS.gene31688:intron
AGGTTGTTGTTCTAACCTTT+GGG 0.362175 1.1:-12276158 MS.gene31688:CDS
TGGCCACTGCTGGAAGTAGA+TGG 0.368491 1.1:-12275559 MS.gene31688:CDS
CTTTAGGATGTCTGCTGAAA+TGG 0.375494 1.1:-12277827 MS.gene31688:intron
ATAAGATTGCTGCAAGTATT+GGG 0.378251 1.1:+12275652 None:intergenic
TTCTTCGCGGACGGCTACCC+TGG 0.381224 1.1:-12276883 MS.gene31688:CDS
TCAGAAACCCTAATTTGTTC+CGG 0.382437 1.1:+12279434 None:intergenic
GTGTTTATGGGTCTAATGTC+TGG 0.388332 1.1:+12276589 None:intergenic
ATAAATTACCTAAATACATC+TGG 0.391749 1.1:+12277086 None:intergenic
AGGTAGCAGAAGAGATGATT+TGG 0.392165 1.1:-12276933 MS.gene31688:CDS
ATACTTGCAGCAATCTTATA+AGG 0.401113 1.1:-12275648 MS.gene31688:CDS
TAGCTGCAGGGTGAAAATAA+AGG 0.408921 1.1:-12276778 MS.gene31688:intron
GGGAGAACCGCAGCTGATAA+AGG 0.410075 1.1:-12279371 MS.gene31688:CDS
CGGGTTCGGGTTTAGCGATC+GGG 0.416775 1.1:+12279570 None:intergenic
GTTTATGTTGGTCGTCGTAT+TGG 0.427782 1.1:-12279116 MS.gene31688:CDS
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 1.1:-12275533 MS.gene31688:CDS
CTGATTATGGATGCCGGCAC+TGG 0.434575 1.1:-12276133 MS.gene31688:CDS
ACGTGCAGCGGCGGCGGCGA+TGG 0.440494 1.1:+12279502 None:intergenic
TATATTGCATCTATTTGTTA+CGG 0.443891 1.1:-12275114 MS.gene31688:CDS
TATGACCTGGTATCCTTGCC+AGG 0.447271 1.1:+12276865 None:intergenic
GTTAAGCTTATTTATCAGGT+TGG 0.450203 1.1:-12276468 MS.gene31688:intron
ACAAGGGACGGCAAGGTGAT+TGG 0.451632 1.1:-12278110 MS.gene31688:CDS
CGGCGGCGATGGTGTTGTTA+CGG 0.451967 1.1:+12279513 None:intergenic
GCGGGTTCGGGTTTAGCGAT+CGG 0.452422 1.1:+12279569 None:intergenic
TTGATCACGTGCAGCGGCGG+CGG 0.456771 1.1:+12279496 None:intergenic
GCCATAGCAGGATCTAATAG+TGG 0.459499 1.1:-12275862 MS.gene31688:CDS
TTTGAGCATAAAACCAGTAA+AGG 0.460416 1.1:-12278291 MS.gene31688:CDS
TTTACCTTGACATGAGTACT+AGG 0.461394 1.1:+12275231 None:intergenic
GGGTTATTTATCAGTAGTGT+AGG 0.469943 1.1:-12276178 MS.gene31688:CDS
AACTCAATAAACTGCCGAAA+AGG 0.471641 1.1:+12276691 None:intergenic
ATCGAAAAGGGATATGAAGA+TGG 0.473461 1.1:-12276199 MS.gene31688:CDS
TCGGCAGTTTATTGAGTTCG+TGG 0.473854 1.1:-12276686 MS.gene31688:CDS
TACAGAGTAGATAGAAAGCT+AGG 0.474012 1.1:-12279158 MS.gene31688:CDS
CTCATCCTTCTTCCTTCACA+AGG 0.477955 1.1:-12276086 MS.gene31688:intron
CTCATCATCATCTCCTTCCA+TGG 0.479092 1.1:+12276425 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.481033 1.1:-12275569 MS.gene31688:CDS
GCCAAAGAAGAAAGTCAGAA+TGG 0.481635 1.1:-12276400 MS.gene31688:CDS
AACAAATAGATGCAATATAG+AGG 0.484055 1.1:+12275118 None:intergenic
TTGAGCATAAAACCAGTAAA+GGG 0.485067 1.1:-12278290 MS.gene31688:CDS
TGGACCTCCTTACGAGTGGC+AGG 0.485361 1.1:-12278259 MS.gene31688:CDS
CGTCGTATTGGTGCCGGTGC+CGG 0.485454 1.1:-12279104 MS.gene31688:CDS
GTGAATCATTTCCATTCAAG+TGG 0.485946 1.1:-12275622 MS.gene31688:CDS
GAATACCTTCACTAGGATAC+AGG 0.489180 1.1:+12275385 None:intergenic
AGGGTAGCCGTCCGCGAAGA+AGG 0.489461 1.1:+12276885 None:intergenic
AACAACCTTGTGAAGGAAGA+AGG 0.492459 1.1:+12276081 None:intergenic
GTTGTCCCAACACATCGAAA+AGG 0.495024 1.1:-12276212 MS.gene31688:CDS
GTGCAACAGGTTCAGGTGGG+TGG 0.497947 1.1:-12279191 MS.gene31688:intron
GATGACTGTGATAGCGGCGG+TGG 0.500267 1.1:-12279392 MS.gene31688:CDS
AGGAATGGATTATGGAACAG+TGG 0.508088 1.1:-12275906 MS.gene31688:CDS
GCTAGTGTACATGCTCATCT+TGG 0.512428 1.1:-12276962 MS.gene31688:CDS
TATTACATCAGTGCCATAGC+AGG 0.513720 1.1:-12275874 MS.gene31688:CDS
GATAGAAAGCTAGGGAAAGG+AGG 0.516277 1.1:-12279149 MS.gene31688:CDS
ATCTGAAAATCCAGCACCAC+GGG 0.518126 1.1:+12275523 None:intergenic
TTCCAAACATCCCATAAACT+AGG 0.518224 1.1:+12277969 None:intergenic
GTTTCTTGAGTTTCATCAGT+CGG 0.518437 1.1:+12275273 None:intergenic
CCTCTTCTACCTCGTGTAGC+GGG 0.519563 1.1:+12279551 None:intergenic
CATGCTCATCTTGGTAGGAC+AGG 0.525496 1.1:-12276953 MS.gene31688:CDS
CCAAAGAAGAAAGTCAGAAT+GGG 0.530872 1.1:-12276399 MS.gene31688:CDS
AACCGCAGCTGATAAAGGTC+CGG 0.531660 1.1:-12279366 MS.gene31688:intron
ATAAACTGCCGAAAAGGTGC+GGG 0.538646 1.1:+12276697 None:intergenic
TTTGCCATGCAGCAACTCGT+TGG 0.539312 1.1:-12277151 MS.gene31688:intron
TTGTCCCAACACATCGAAAA+GGG 0.539526 1.1:-12276211 MS.gene31688:CDS
AAAACCTTTGCTTCATAGGT+CGG 0.541274 1.1:+12276337 None:intergenic
CGCGGACGGCTACCCTGGCA+AGG 0.543822 1.1:-12276878 MS.gene31688:CDS
AAACACTGACGGTGCTCAGA+AGG 0.548675 1.1:-12276572 MS.gene31688:intron
CGTCCCTTGTAATGAACTCG+TGG 0.549783 1.1:+12278123 None:intergenic
GCTACCCTGGCAAGGATACC+AGG 0.551712 1.1:-12276870 MS.gene31688:intron
TACTAAGAACAAGAGCGGCC+TGG 0.553288 1.1:+12275310 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 1.1:-12275374 MS.gene31688:CDS
AAACGAACAACCTCACGTGC+CGG 0.557745 1.1:-12279453 MS.gene31688:CDS
GCATATCAGCAACATTGTAA+TGG 0.559923 1.1:+12276236 None:intergenic
CCCGCTACACGAGGTAGAAG+AGG 0.561644 1.1:-12279551 MS.gene31688:CDS
TTTGTATGTAGTGTATTAGG+AGG 0.562063 1.1:-12278159 MS.gene31688:intron
TCCAAACATCCCATAAACTA+GGG 0.562426 1.1:+12277970 None:intergenic
ACCTCTTCTACCTCGTGTAG+CGG 0.562642 1.1:+12279550 None:intergenic
GTAGATAGAAAGCTAGGGAA+AGG 0.563147 1.1:-12279152 MS.gene31688:CDS
GGAATGGATTATGGAACAGT+GGG 0.563150 1.1:-12275905 MS.gene31688:CDS
TGCCGGTGCCGGTGCTGTTG+AGG 0.563693 1.1:-12279093 MS.gene31688:intron
TTGTAAACCTGCCACTCGTA+AGG 0.564528 1.1:+12278252 None:intergenic
CACGAGTTCATTACAAGGGA+CGG 0.566096 1.1:-12278122 MS.gene31688:CDS
GCCGAAAAGGTGCGGGACAG+AGG 0.569844 1.1:+12276704 None:intergenic
TGGGCACTGATTATGGATGC+CGG 0.570860 1.1:-12276139 MS.gene31688:CDS
ATCTAATAGTGGGAGCTCGT+TGG 0.570915 1.1:-12275851 MS.gene31688:CDS
GATTTCCTGTATCCTAGTGA+AGG 0.571117 1.1:-12275390 MS.gene31688:CDS
GGCCACTGCTGGAAGTAGAT+GGG 0.571298 1.1:-12275558 MS.gene31688:CDS
GTTGGTCGTCGTATTGGTGC+CGG 0.571967 1.1:-12279110 MS.gene31688:CDS
CTTCGATGAATACCTTCACT+AGG 0.572280 1.1:+12275378 None:intergenic
AGAGGACGGTTGACCATGGA+AGG 0.574941 1.1:-12276438 MS.gene31688:CDS
TACCTCAACAGCACCGGCAC+CGG 0.575462 1.1:+12279091 None:intergenic
CTAATTTGTTCCGGCACGTG+AGG 0.575786 1.1:+12279443 None:intergenic
TCGAAAAGGGATATGAAGAT+GGG 0.578550 1.1:-12276198 MS.gene31688:CDS
CTATCATACCTCAACAGCAC+CGG 0.581895 1.1:+12279085 None:intergenic
CGTTGGCGTGATAATTCGAC+TGG 0.587524 1.1:-12277134 MS.gene31688:CDS
GCAAGGTGATTGGTATGTCA+TGG 0.589006 1.1:-12278100 MS.gene31688:intron
CGCGCCGACCTATGAAGCAA+AGG 0.589757 1.1:-12276341 MS.gene31688:intron
AACTGCTGCTACATATGACC+AGG 0.592537 1.1:-12275328 MS.gene31688:CDS
ACAGAGTAGATAGAAAGCTA+GGG 0.592579 1.1:-12279157 MS.gene31688:CDS
TACTTGATCACGTGCAGCGG+CGG 0.595072 1.1:+12279493 None:intergenic
AACCGGACCTTTATCAGCTG+CGG 0.595722 1.1:+12279364 None:intergenic
AATAAACTGCCGAAAAGGTG+CGG 0.597388 1.1:+12276696 None:intergenic
GTGTACATGCTCATCTTGGT+AGG 0.600986 1.1:-12276958 MS.gene31688:CDS
TTTCTGGTTCGAAGTTGAGG+AGG 0.607805 1.1:+12279629 None:intergenic
CTTTCCTAGTACTCATGTCA+AGG 0.608784 1.1:-12275235 MS.gene31688:intron
TTGTGCAGTGAAACCAGTGC+CGG 0.610323 1.1:+12276120 None:intergenic
TGCCCATCTACTTCCAGCAG+TGG 0.611695 1.1:+12275556 None:intergenic
CCATAGCAGGATCTAATAGT+GGG 0.612424 1.1:-12275861 MS.gene31688:CDS
CCCACTATTAGATCCTGCTA+TGG 0.617210 1.1:+12275861 None:intergenic
TCTCTTCATGAGTTCCCGGA+GGG 0.618779 1.1:+12277302 None:intergenic
GTTCATTACAAGGGACGGCA+AGG 0.622003 1.1:-12278117 MS.gene31688:CDS
TATCAGGTTGGACAGAAGAG+AGG 0.622077 1.1:-12276456 MS.gene31688:CDS
GAAGAGAGGACGGTTGACCA+TGG 0.624209 1.1:-12276442 MS.gene31688:CDS
TTGTACTTGATCACGTGCAG+CGG 0.625961 1.1:+12279490 None:intergenic
TGAAGGTATTCATCGAAGGT+GGG 0.628022 1.1:-12275373 MS.gene31688:CDS
TCGTTGGTTGTAATGTCGAA+AGG 0.629923 1.1:-12275835 MS.gene31688:intron
TTCTCTTCATGAGTTCCCGG+AGG 0.630312 1.1:+12277301 None:intergenic
TGGGAATGCCAGCAACACAA+TGG 0.633757 1.1:-12276380 MS.gene31688:CDS
CTAGTGAAGGTATTCATCGA+AGG 0.635960 1.1:-12275377 MS.gene31688:CDS
TAGAGAAGATGCATTCTAGA+GGG 0.637214 1.1:-12277771 MS.gene31688:intron
TTTGTGCAACAGGTTCAGGT+GGG 0.638924 1.1:-12279194 MS.gene31688:intron
ATGACCTGGTATCCTTGCCA+GGG 0.644585 1.1:+12276866 None:intergenic
TTAGAGAAGATGCATTCTAG+AGG 0.645638 1.1:-12277772 MS.gene31688:CDS
ATTCATCGAAGGTGGGACAA+TGG 0.646078 1.1:-12275366 MS.gene31688:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 1.1:-12275539 MS.gene31688:CDS
TTTCTATCTACTCTGTACAT+CGG 0.650362 1.1:+12279164 None:intergenic
TGTCCCACGAGTTCATTACA+AGG 0.652591 1.1:-12278127 MS.gene31688:CDS
AATGAACTCGTGGGACACCA+TGG 0.653940 1.1:+12278133 None:intergenic
TAAACCTGCCACTCGTAAGG+AGG 0.654486 1.1:+12278255 None:intergenic
CATCCATAATCAGTGCCCAA+AGG 0.657903 1.1:+12276143 None:intergenic
ATGACTGTGATAGCGGCGGT+GGG 0.665147 1.1:-12279391 MS.gene31688:CDS
GGTGTCGTGTATAGCAATCG+AGG 0.667047 1.1:-12277806 MS.gene31688:CDS
AGTGTATTAGGAGGTAGCCA+TGG 0.671950 1.1:-12278150 MS.gene31688:CDS
GATCTGAAAATCCAGCACCA+CGG 0.671996 1.1:+12275522 None:intergenic
ATTTGTTTCAGATACGTGCA+TGG 0.673109 1.1:-12277355 MS.gene31688:intron
GTCCCTTGTAATGAACTCGT+GGG 0.673497 1.1:+12278124 None:intergenic
ATTACAATGTTGCTGATATG+CGG 0.677018 1.1:-12276234 MS.gene31688:CDS
ATGGATGATGACTGTGATAG+CGG 0.678914 1.1:-12279398 MS.gene31688:CDS
AGGTTGGACAGAAGAGAGGA+CGG 0.682501 1.1:-12276452 MS.gene31688:CDS
ATTAGACCCATAAACACTGA+CGG 0.692330 1.1:-12276583 MS.gene31688:CDS
GTCCCACGAGTTCATTACAA+GGG 0.693718 1.1:-12278126 MS.gene31688:CDS
TGGAATACTAAGAACAAGAG+CGG 0.693783 1.1:+12275305 None:intergenic
TAGCAGCAGTTGAAGTAATG+CGG 0.693804 1.1:+12275340 None:intergenic
ATTATGGACCTCCTTACGAG+TGG 0.700752 1.1:-12278263 MS.gene31688:CDS
AAACCCGAACCCGCTACACG+AGG 0.720713 1.1:-12279560 MS.gene31688:CDS
GATGATGACTGTGATAGCGG+CGG 0.731600 1.1:-12279395 MS.gene31688:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATAAAAAATGGAAAGA+AGG - chr1.1:12279131-12279150 MS.gene31688:CDS 15.0%
!! TTATTTGCATTTCTAATTTA+CGG - chr1.1:12277663-12277682 MS.gene31688:intron 15.0%
!!! AAGATTTTATTTTTTTATCG+AGG - chr1.1:12276666-12276685 MS.gene31688:CDS 15.0%
!!! AGATTTTATTTTTTTATCGA+GGG - chr1.1:12276667-12276686 MS.gene31688:CDS 15.0%
!!! ATAACTACTTTTGTTTTTAT+AGG - chr1.1:12278804-12278823 MS.gene31688:intron 15.0%
!!! GAAAAAAAAATTACTTTTTC+AGG + chr1.1:12275422-12275441 None:intergenic 15.0%
!!! TTCAATTTTATTTTTTAACC+TGG - chr1.1:12276707-12276726 MS.gene31688:CDS 15.0%
!! AAAAATTCACCATATAAGTA+CGG - chr1.1:12275841-12275860 MS.gene31688:CDS 20.0%
!! AATAAAAACATCAATCAATG+TGG + chr1.1:12276038-12276057 None:intergenic 20.0%
!! ATAAATTACCTAAATACATC+TGG + chr1.1:12277647-12277666 None:intergenic 20.0%
!! ATCGAAAAGTGATATATATT+TGG + chr1.1:12278103-12278122 None:intergenic 20.0%
!! GATATATATTTGGCATAATT+TGG + chr1.1:12278093-12278112 None:intergenic 20.0%
!! GTAATTGACTATATTGTATT+AGG - chr1.1:12278965-12278984 MS.gene31688:intron 20.0%
!! TATTAAAAACAAATATGACC+TGG + chr1.1:12277881-12277900 None:intergenic 20.0%
!!! AAAATTACTTTTTCAGGAAT+AGG + chr1.1:12275416-12275435 None:intergenic 20.0%
!!! AAATATATATCACTTTTCGA+TGG - chr1.1:12278102-12278121 MS.gene31688:CDS 20.0%
!!! AGCTAACAATTTTATTAGAA+CGG + chr1.1:12277937-12277956 None:intergenic 20.0%
!!! ATAATTTTAGCAACATACAA+TGG + chr1.1:12276543-12276562 None:intergenic 20.0%
!!! ATCAATTTTTTTTATCTGCA+TGG - chr1.1:12275459-12275478 MS.gene31688:intron 20.0%
!!! CTTTCTTGCATATTTTTTTT+GGG - chr1.1:12277141-12277160 MS.gene31688:CDS 20.0%
!!! GTGATTTGCATTTTTTTTTT+CGG + chr1.1:12277293-12277312 None:intergenic 20.0%
!!! TAACTGTATTTTCTATTTTG+TGG - chr1.1:12276880-12276899 MS.gene31688:CDS 20.0%
!!! TACTTTTGTTTTTATAGGAA+TGG - chr1.1:12278809-12278828 MS.gene31688:intron 20.0%
!!! TATATTGCATCTATTTGTTA+CGG - chr1.1:12279616-12279635 MS.gene31688:CDS 20.0%
!!! TCAAGTGGATTAATAAAAAA+TGG - chr1.1:12279123-12279142 MS.gene31688:CDS 20.0%
!!! TCAATTATTCATTTTTACGT+CGG + chr1.1:12275910-12275929 None:intergenic 20.0%
!!! TTAGGTTATTTTGCATATTT+TGG - chr1.1:12278983-12279002 MS.gene31688:intron 20.0%
!!! TTTCTTGCATATTTTTTTTG+GGG - chr1.1:12277142-12277161 MS.gene31688:CDS 20.0%
!!! TTTTAAAATTTTTGTGCAAC+AGG - chr1.1:12275526-12275545 MS.gene31688:CDS 20.0%
!!! TTTTTATTAATCCACTTGAA+TGG + chr1.1:12279122-12279141 None:intergenic 20.0%
! AAAAAATAACAACCTTGTGA+AGG + chr1.1:12278659-12278678 None:intergenic 25.0%
! AACAAATAGATGCAATATAG+AGG + chr1.1:12279615-12279634 None:intergenic 25.0%
! AATAAATCAAAAACAGGATC+AGG + chr1.1:12276998-12277017 None:intergenic 25.0%
! TAATAAAATTGTTAGCTGCA+GGG - chr1.1:12277940-12277959 MS.gene31688:intron 25.0%
! TAATGTATTCTTCACTGTAT+TGG - chr1.1:12278755-12278774 MS.gene31688:intron 25.0%
! TCCACAAATAAATCAAAAAC+AGG + chr1.1:12277004-12277023 None:intergenic 25.0%
! TGAAGTTAAATGAGTCTTTA+TGG - chr1.1:12278420-12278439 MS.gene31688:intron 25.0%
! TGATTGAAAATTGATGTCAA+TGG - chr1.1:12275936-12275955 MS.gene31688:intron 25.0%
! TTCATGATTAAAGAAGACTA+TGG + chr1.1:12279548-12279567 None:intergenic 25.0%
! TTGTTTGTATGTAGTGTATT+AGG - chr1.1:12276568-12276587 MS.gene31688:intron 25.0%
! TTTCATTCATAATCAAAGTC+TGG - chr1.1:12276083-12276102 MS.gene31688:intron 25.0%
!! ATTTTCTATTTTGTGGCTTT+AGG - chr1.1:12276887-12276906 MS.gene31688:CDS 25.0%
!!! ATGATAAAGTATTGTCTATG+TGG - chr1.1:12275718-12275737 MS.gene31688:intron 25.0%
!!! ATGTTTGATGTTATTTTTGC+AGG - chr1.1:12279573-12279592 MS.gene31688:CDS 25.0%
!!! GCTTTCTTGCATATTTTTTT+TGG - chr1.1:12277140-12277159 MS.gene31688:CDS 25.0%
!!! GTTATTTTTGCAGGAAAAAT+GGG - chr1.1:12279582-12279601 MS.gene31688:CDS 25.0%
!!! GTTTTTATAGGAATGGATTA+TGG - chr1.1:12278816-12278835 MS.gene31688:intron 25.0%
!!! GTTTTTTATTCTTTTTGTCC+AGG - chr1.1:12278469-12278488 MS.gene31688:intron 25.0%
!!! TCCTGTTTTTGATTTATTTG+TGG - chr1.1:12277000-12277019 MS.gene31688:intron 25.0%
!!! TCTCTTCTAAAATTAATTCC+AGG - chr1.1:12279306-12279325 MS.gene31688:intron 25.0%
!!! TGATAAAGTATTGTCTATGT+GGG - chr1.1:12275719-12275738 MS.gene31688:intron 25.0%
!!! TGTTATTTTTGCAGGAAAAA+TGG - chr1.1:12279581-12279600 MS.gene31688:CDS 25.0%
!!! TTCTTGCATATTTTTTTTGG+GGG - chr1.1:12277143-12277162 MS.gene31688:intron 25.0%
AACTCAGCTTAAATTAGTTG+GGG - chr1.1:12277234-12277253 MS.gene31688:intron 30.0%
ACAACATCATACTTATATGG+CGG + chr1.1:12275994-12276013 None:intergenic 30.0%
ACCACAACATCATACTTATA+TGG + chr1.1:12275997-12276016 None:intergenic 30.0%
AGAAGAGAAAACATCACATA+TGG + chr1.1:12279294-12279313 None:intergenic 30.0%
AGAATGCATCTTCTCTAATA+TGG + chr1.1:12276956-12276975 None:intergenic 30.0%
AGATTACTGTTTACAGATGA+GGG - chr1.1:12278203-12278222 MS.gene31688:intron 30.0%
ATGGTAATAAATGAGCTGAA+AGG + chr1.1:12276524-12276543 None:intergenic 30.0%
ATTACAATGTTGCTGATATG+CGG - chr1.1:12278496-12278515 MS.gene31688:intron 30.0%
CAACTCAGCTTAAATTAGTT+GGG - chr1.1:12277233-12277252 MS.gene31688:intron 30.0%
CTAAAATTAATTCCAGGTTG+TGG - chr1.1:12279312-12279331 MS.gene31688:intron 30.0%
CTAATAAAATTGTTAGCTGC+AGG - chr1.1:12277939-12277958 MS.gene31688:intron 30.0%
GGTAATAACAATTGCTTGTT+TGG - chr1.1:12276219-12276238 MS.gene31688:CDS 30.0%
GTAAATAAAAGAGAGATCAC+CGG - chr1.1:12276308-12276327 MS.gene31688:intron 30.0%
GTTAAGCTTATTTATCAGGT+TGG - chr1.1:12278262-12278281 MS.gene31688:CDS 30.0%
TCAACTCAGCTTAAATTAGT+TGG - chr1.1:12277232-12277251 MS.gene31688:intron 30.0%
TGCTGTTAAGCTTATTTATC+AGG - chr1.1:12278258-12278277 MS.gene31688:CDS 30.0%
TTAACCTGGAATTATATTGC+AGG - chr1.1:12276721-12276740 MS.gene31688:CDS 30.0%
TTCTGATAAGCAAGAGATTA+TGG - chr1.1:12275313-12275332 MS.gene31688:CDS 30.0%
TTGAGCATAAAACCAGTAAA+GGG - chr1.1:12276440-12276459 MS.gene31688:CDS 30.0%
TTTCTATCTACTCTGTACAT+CGG + chr1.1:12275569-12275588 None:intergenic 30.0%
TTTGAGCATAAAACCAGTAA+AGG - chr1.1:12276439-12276458 MS.gene31688:CDS 30.0%
TTTGTATGTAGTGTATTAGG+AGG - chr1.1:12276571-12276590 MS.gene31688:intron 30.0%
! AAGCTTTTTGTGTCCTTATT+AGG - chr1.1:12277209-12277228 MS.gene31688:intron 30.0%
! GAATTTTCTGATCAAAATCC+AGG - chr1.1:12277687-12277706 MS.gene31688:intron 30.0%
! TCTTGTTGCTAATATTTTCC+TGG - chr1.1:12278231-12278250 MS.gene31688:intron 30.0%
! TCTTGTTTGCAAGAAGAAAA+TGG - chr1.1:12277978-12277997 MS.gene31688:CDS 30.0%
! TTGATGTCAGTGTTATTGAT+TGG - chr1.1:12275801-12275820 MS.gene31688:intron 30.0%
! TTGTGCAATGAATAATTTGC+AGG - chr1.1:12276405-12276424 MS.gene31688:CDS 30.0%
!! ATTCGGATTCGGTTTATTTT+TGG + chr1.1:12275129-12275148 None:intergenic 30.0%
!! GTCTCTGATCATTTTAACAT+TGG + chr1.1:12278446-12278465 None:intergenic 30.0%
!! TCATTTTTACGTCGGATATT+AGG + chr1.1:12275902-12275921 None:intergenic 30.0%
!! TGAAGAGAAAAAGCTTTTTC+TGG - chr1.1:12277443-12277462 MS.gene31688:intron 30.0%
!!! ATTACTTTTTCAGGAATAGG+CGG + chr1.1:12275413-12275432 None:intergenic 30.0%
!!! ATTTTTTTATCGAGGGCTAT+GGG - chr1.1:12276674-12276693 MS.gene31688:CDS 30.0%
!!! CGGTTTATTTTTGGTTTTTC+TGG + chr1.1:12275120-12275139 None:intergenic 30.0%
!!! TATTTTTTTATCGAGGGCTA+TGG - chr1.1:12276673-12276692 MS.gene31688:CDS 30.0%
AAAACCTTTGCTTCATAGGT+CGG + chr1.1:12278396-12278415 None:intergenic 35.0%
AAATTAGTTGGGGTCTAATG+TGG - chr1.1:12277244-12277263 MS.gene31688:intron 35.0%
AACTCAATAAACTGCCGAAA+AGG + chr1.1:12278042-12278061 None:intergenic 35.0%
ACAGAGTAGATAGAAAGCTA+GGG - chr1.1:12275573-12275592 MS.gene31688:CDS 35.0%
ACTGCAAATTACACACACTA+AGG + chr1.1:12276369-12276388 None:intergenic 35.0%
ATATTCTTGGCCCTAGTTTA+TGG - chr1.1:12276750-12276769 MS.gene31688:CDS 35.0%
ATCAAAGTCTGGATACATGT+AGG - chr1.1:12276094-12276113 MS.gene31688:CDS 35.0%
ATCAACGTCCAGATGTATTT+AGG - chr1.1:12277636-12277655 MS.gene31688:intron 35.0%
ATCGAAAAGGGATATGAAGA+TGG - chr1.1:12278531-12278550 MS.gene31688:intron 35.0%
ATCTGTATCACATTCACCAT+AGG + chr1.1:12275875-12275894 None:intergenic 35.0%
ATGACCTGCAATATAATTCC+AGG + chr1.1:12276728-12276747 None:intergenic 35.0%
ATTAGACCCATAAACACTGA+CGG - chr1.1:12278147-12278166 MS.gene31688:CDS 35.0%
ATTGCCATATTCTTGCAACA+GGG - chr1.1:12277731-12277750 MS.gene31688:intron 35.0%
ATTTGTTTCAGATACGTGCA+TGG - chr1.1:12277375-12277394 MS.gene31688:intron 35.0%
CCAAAGAAGAAAGTCAGAAT+GGG - chr1.1:12278331-12278350 MS.gene31688:intron 35.0%
CCCATTAAAAAAGAATGCAC+CGG + chr1.1:12276330-12276349 None:intergenic 35.0%
GAAGAAAACCTTTGCTTCAT+AGG + chr1.1:12278400-12278419 None:intergenic 35.0%
GAGATTACTGTTTACAGATG+AGG - chr1.1:12278202-12278221 MS.gene31688:intron 35.0%
GCATATCAGCAACATTGTAA+TGG + chr1.1:12278497-12278516 None:intergenic 35.0%
GCCATATAAGTATGATGTTG+TGG - chr1.1:12275993-12276012 MS.gene31688:intron 35.0%
GGACACAAAAAGCTTAATCT+AGG + chr1.1:12277204-12277223 None:intergenic 35.0%
GGGTTATTTATCAGTAGTGT+AGG - chr1.1:12278552-12278571 MS.gene31688:intron 35.0%
GTGAATCATTTCCATTCAAG+TGG - chr1.1:12279108-12279127 MS.gene31688:CDS 35.0%
GTTTCTTGAGTTTCATCAGT+CGG + chr1.1:12279460-12279479 None:intergenic 35.0%
TAATCTAGGTACACACACTA+CGG + chr1.1:12277190-12277209 None:intergenic 35.0%
TACAGAGTAGATAGAAAGCT+AGG - chr1.1:12275572-12275591 MS.gene31688:CDS 35.0%
TAGAGAAGATGCATTCTAGA+GGG - chr1.1:12276959-12276978 MS.gene31688:CDS 35.0%
TATTCTTGGCCCTAGTTTAT+GGG - chr1.1:12276751-12276770 MS.gene31688:CDS 35.0%
TCCAAACATCCCATAAACTA+GGG + chr1.1:12276763-12276782 None:intergenic 35.0%
TCCATAATTACACCCTTTAC+TGG + chr1.1:12276455-12276474 None:intergenic 35.0%
TCGAAAAGGGATATGAAGAT+GGG - chr1.1:12278532-12278551 MS.gene31688:intron 35.0%
TCGTTAAAGCTCTATTCTTC+AGG - chr1.1:12278922-12278941 MS.gene31688:intron 35.0%
TGCAAGGAGACAAACTAATA+CGG + chr1.1:12276182-12276201 None:intergenic 35.0%
TGCAGAACTAGCATTATATG+TGG - chr1.1:12276131-12276150 MS.gene31688:CDS 35.0%
TGGAATACTAAGAACAAGAG+CGG + chr1.1:12279428-12279447 None:intergenic 35.0%
TGGAATTATATTGCAGGTCA+TGG - chr1.1:12276727-12276746 MS.gene31688:CDS 35.0%
TGTTATTACCAACTCTCATG+TGG + chr1.1:12276209-12276228 None:intergenic 35.0%
TTAGAGAAGATGCATTCTAG+AGG - chr1.1:12276958-12276977 MS.gene31688:CDS 35.0%
TTCCAAACATCCCATAAACT+AGG + chr1.1:12276764-12276783 None:intergenic 35.0%
TTCTTCACTGTATTGGAACT+TGG - chr1.1:12278762-12278781 MS.gene31688:intron 35.0%
TTTACCTTGACATGAGTACT+AGG + chr1.1:12279502-12279521 None:intergenic 35.0%
! AAACCTGAGAACTTTTTGCT+TGG - chr1.1:12277405-12277424 MS.gene31688:intron 35.0%
! AATTTTTGTGCAACAGGTTC+AGG - chr1.1:12275532-12275551 MS.gene31688:CDS 35.0%
! ACACTAATTTTCCTTCTTCG+CGG - chr1.1:12277834-12277853 MS.gene31688:intron 35.0%
! ACCAGTAAAGGGTGTAATTA+TGG - chr1.1:12276451-12276470 MS.gene31688:CDS 35.0%
! AGGTTGTTGTTCTAACCTTT+GGG - chr1.1:12278572-12278591 MS.gene31688:intron 35.0%
! ATATCCCTTTTCGATGTGTT+GGG + chr1.1:12278526-12278545 None:intergenic 35.0%
! ATTGATGTCAATGGTAACGA+TGG - chr1.1:12275945-12275964 MS.gene31688:intron 35.0%
! CAGAGGATACACATATTTTC+TGG + chr1.1:12278012-12278031 None:intergenic 35.0%
! CGTGTCTTGATTTTTACTGT+TGG - chr1.1:12276839-12276858 MS.gene31688:intron 35.0%
! GTGGATTTTTCATTACTGCA+CGG - chr1.1:12277019-12277038 MS.gene31688:intron 35.0%
! TAAGCTGAGTTGACCTAATA+AGG + chr1.1:12277225-12277244 None:intergenic 35.0%
! TAGGTTGTTGTTCTAACCTT+TGG - chr1.1:12278571-12278590 MS.gene31688:intron 35.0%
! TCAGTGTTATTGATTGGAGT+TGG - chr1.1:12275807-12275826 MS.gene31688:intron 35.0%
! TCTTCAGGCATTTGGTATTT+TGG - chr1.1:12278937-12278956 MS.gene31688:intron 35.0%
! TGCAATGAATAATTTGCAGG+TGG - chr1.1:12276408-12276427 MS.gene31688:CDS 35.0%
! TTAGTGTGTGTAATTTGCAG+TGG - chr1.1:12276368-12276387 MS.gene31688:CDS 35.0%
! TTTTTCATTACTGCACGGAT+TGG - chr1.1:12277024-12277043 MS.gene31688:intron 35.0%
! TTTTTCTCTTCATGAGTTCC+CGG + chr1.1:12277435-12277454 None:intergenic 35.0%
!! TCACTTTTCGATGGAATTGT+TGG - chr1.1:12278111-12278130 MS.gene31688:CDS 35.0%
!! TCAGAAACCCTAATTTGTTC+CGG + chr1.1:12275299-12275318 None:intergenic 35.0%
!! TTTCTGGTTGATCTTGGTTT+AGG - chr1.1:12277459-12277478 MS.gene31688:intron 35.0%
!!! AAGCTTTTTCTGGTTGATCT+TGG - chr1.1:12277453-12277472 MS.gene31688:intron 35.0%
!!! ACCGGTGCATTCTTTTTTAA+TGG - chr1.1:12276326-12276345 MS.gene31688:intron 35.0%
!!! CAATCAATGCTTGCTTTTTG+AGG + chr1.1:12276251-12276270 None:intergenic 35.0%
!!! CCGGTGCATTCTTTTTTAAT+GGG - chr1.1:12276327-12276346 MS.gene31688:intron 35.0%
!!! CGGTGCATTCTTTTTTAATG+GGG - chr1.1:12276328-12276347 MS.gene31688:intron 35.0%
!!! GGTTTTGGACAAGTTTATGT+TGG - chr1.1:12275602-12275621 MS.gene31688:CDS 35.0%
!!! TGCATATTTTTTTTGGGGGT+GGG - chr1.1:12277147-12277166 MS.gene31688:intron 35.0%
!!! TTGCATATTTTTTTTGGGGG+TGG - chr1.1:12277146-12277165 MS.gene31688:intron 35.0%
!!! TTTTTTCGGTTTTAGACCCA+CGG + chr1.1:12277279-12277298 None:intergenic 35.0%
AACAACCTTGTGAAGGAAGA+AGG + chr1.1:12278652-12278671 None:intergenic 40.0%
AATAAACTGCCGAAAAGGTG+CGG + chr1.1:12278037-12278056 None:intergenic 40.0%
AATCTAGGTACACACACTAC+GGG + chr1.1:12277189-12277208 None:intergenic 40.0%
ACACTAATCCATTGTGTTGC+TGG + chr1.1:12278361-12278380 None:intergenic 40.0%
ACTATGTCTCTCACTTCTAC+TGG - chr1.1:12279035-12279054 MS.gene31688:intron 40.0%
AGCAACATTGTAATGGTACC+TGG + chr1.1:12278490-12278509 None:intergenic 40.0%
AGCTCTATTCTTCAGGCATT+TGG - chr1.1:12278929-12278948 MS.gene31688:intron 40.0%
AGGTAGCAGAAGAGATGATT+TGG - chr1.1:12277797-12277816 MS.gene31688:CDS 40.0%
ATGGATGATGACTGTGATAG+CGG - chr1.1:12275332-12275351 MS.gene31688:CDS 40.0%
ATGGGTCTAATGTCTGGATT+TGG + chr1.1:12278138-12278157 None:intergenic 40.0%
CATCAAAATCAACCAAAGCC+TGG + chr1.1:12277708-12277727 None:intergenic 40.0%
CCATAGCAGGATCTAATAGT+GGG - chr1.1:12278869-12278888 MS.gene31688:intron 40.0%
CCCATTCTGACTTTCTTCTT+TGG + chr1.1:12278334-12278353 None:intergenic 40.0%
CTTCGATGAATACCTTCACT+AGG + chr1.1:12279355-12279374 None:intergenic 40.0%
CTTTCCTAGTACTCATGTCA+AGG - chr1.1:12279495-12279514 MS.gene31688:CDS 40.0%
GAATACCTTCACTAGGATAC+AGG + chr1.1:12279348-12279367 None:intergenic 40.0%
GATTGCCATATTCTTGCAAC+AGG - chr1.1:12277730-12277749 MS.gene31688:intron 40.0%
GATTTCCTGTATCCTAGTGA+AGG - chr1.1:12279340-12279359 MS.gene31688:intron 40.0%
GCCAAAGAAGAAAGTCAGAA+TGG - chr1.1:12278330-12278349 MS.gene31688:intron 40.0%
GTAGATAGAAAGCTAGGGAA+AGG - chr1.1:12275578-12275597 MS.gene31688:CDS 40.0%
GTGTTTATGGGTCTAATGTC+TGG + chr1.1:12278144-12278163 None:intergenic 40.0%
GTTAAACTGTGAAAGCCACA+AGG + chr1.1:12277118-12277137 None:intergenic 40.0%
GTTTATGTTGGTCGTCGTAT+TGG - chr1.1:12275614-12275633 MS.gene31688:CDS 40.0%
TAAGCTTAACAGCACAAACC+AGG + chr1.1:12278252-12278271 None:intergenic 40.0%
TAGCAGCAGTTGAAGTAATG+CGG + chr1.1:12279393-12279412 None:intergenic 40.0%
TAGCTGCAGGGTGAAAATAA+AGG - chr1.1:12277952-12277971 MS.gene31688:intron 40.0%
TATTACATCAGTGCCATAGC+AGG - chr1.1:12278856-12278875 MS.gene31688:intron 40.0%
TCTACCTTGCCAAGAAAAGT+TGG - chr1.1:12277489-12277508 MS.gene31688:intron 40.0%
TCTGATCAAAATCCAGGCTT+TGG - chr1.1:12277693-12277712 MS.gene31688:intron 40.0%
TGTGGCTTTCACAGTTTAAC+AGG - chr1.1:12277118-12277137 MS.gene31688:CDS 40.0%
TTGCAGGTCATGGATATTCT+TGG - chr1.1:12276737-12276756 MS.gene31688:CDS 40.0%
TTGCCATATTCTTGCAACAG+GGG - chr1.1:12277732-12277751 MS.gene31688:intron 40.0%
TTGTCCCAACACATCGAAAA+GGG - chr1.1:12278519-12278538 MS.gene31688:intron 40.0%
! AATGGTAACGATGGTAGATG+GGG - chr1.1:12275954-12275973 MS.gene31688:intron 40.0%
! ACCATATAAGTACGGTGTTG+TGG - chr1.1:12275849-12275868 MS.gene31688:CDS 40.0%
! AGGATTTTTCGTCACTGCTA+TGG - chr1.1:12279151-12279170 MS.gene31688:CDS 40.0%
! CAATGGTAACGATGGTAGAT+GGG - chr1.1:12275953-12275972 MS.gene31688:intron 40.0%
! CACTTCTACTGGTGATTTGT+TGG - chr1.1:12279046-12279065 MS.gene31688:intron 40.0%
! CATATCCCTTTTCGATGTGT+TGG + chr1.1:12278527-12278546 None:intergenic 40.0%
! GTGTAAGCACCAACTTTTCT+TGG + chr1.1:12277501-12277520 None:intergenic 40.0%
! GTGTTATTGATTGGAGTTGG+CGG - chr1.1:12275810-12275829 MS.gene31688:intron 40.0%
! TAATTTTCCTTCTTCGCGGA+CGG - chr1.1:12277838-12277857 MS.gene31688:intron 40.0%
! TCAATGGTAACGATGGTAGA+TGG - chr1.1:12275952-12275971 MS.gene31688:intron 40.0%
! TCGTTGGTTGTAATGTCGAA+AGG - chr1.1:12278895-12278914 MS.gene31688:intron 40.0%
! TGTTATTGATTGGAGTTGGC+GGG - chr1.1:12275811-12275830 MS.gene31688:intron 40.0%
!! ACTGGTGATTTGTTGGTTTC+AGG - chr1.1:12279053-12279072 MS.gene31688:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG - chr1.1:12278824-12278843 MS.gene31688:intron 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG - chr1.1:12279353-12279372 MS.gene31688:intron 40.0%
!! CTGGTGATTTGTTGGTTTCA+GGG - chr1.1:12279054-12279073 MS.gene31688:intron 40.0%
!! CTTTAGGATGTCTGCTGAAA+TGG - chr1.1:12276903-12276922 MS.gene31688:CDS 40.0%
!! GATACACATATTTTCTGGCG+AGG + chr1.1:12278007-12278026 None:intergenic 40.0%
!! GCTCAAGCTTTAAGCAAAAG+CGG + chr1.1:12276157-12276176 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG - chr1.1:12278825-12278844 MS.gene31688:intron 40.0%
!! TAACCTTTGGGCACTGATTA+TGG - chr1.1:12278584-12278603 MS.gene31688:intron 40.0%
!! TCATCAGTCGGTTTTCTTCT+TGG + chr1.1:12279448-12279467 None:intergenic 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG - chr1.1:12279357-12279376 MS.gene31688:intron 40.0%
!!! ATATTTTTTTTGGGGGTGGG+GGG - chr1.1:12277150-12277169 MS.gene31688:intron 40.0%
!!! CATATTTTTTTTGGGGGTGG+GGG - chr1.1:12277149-12277168 MS.gene31688:intron 40.0%
!!! GCATATTTTTTTTGGGGGTG+GGG - chr1.1:12277148-12277167 MS.gene31688:intron 40.0%
!!! GTGTTGTTACGGTTTTTAGC+AGG + chr1.1:12275209-12275228 None:intergenic 40.0%
!!! GTTTTTCTGGTTCGAAGTTG+AGG + chr1.1:12275107-12275126 None:intergenic 40.0%
!!! TTCGGGTTTTGATTCGGATT+CGG + chr1.1:12275140-12275159 None:intergenic 40.0%
AACTGCTGCTACATATGACC+AGG - chr1.1:12279402-12279421 MS.gene31688:CDS 45.0%
ACTCTCATGTGGAGTTTGCA+AGG + chr1.1:12276198-12276217 None:intergenic 45.0%
AGTGAGAGACATAGTCACAC+AGG + chr1.1:12279030-12279049 None:intergenic 45.0%
AGTGTATTAGGAGGTAGCCA+TGG - chr1.1:12276580-12276599 MS.gene31688:CDS 45.0%
ATCTGAAAATCCAGCACCAC+GGG + chr1.1:12279210-12279229 None:intergenic 45.0%
ATTATGGACCTCCTTACGAG+TGG - chr1.1:12276467-12276486 MS.gene31688:intron 45.0%
ATTCATCGAAGGTGGGACAA+TGG - chr1.1:12279364-12279383 MS.gene31688:intron 45.0%
CACGAGTTCATTACAAGGGA+CGG - chr1.1:12276608-12276627 MS.gene31688:CDS 45.0%
CATCCATAATCAGTGCCCAA+AGG + chr1.1:12278590-12278609 None:intergenic 45.0%
CATGCTAAACCAGTCATGCT+AGG - chr1.1:12277057-12277076 MS.gene31688:intron 45.0%
CCCACTATTAGATCCTGCTA+TGG + chr1.1:12278872-12278891 None:intergenic 45.0%
CTATCATACCTCAACAGCAC+CGG + chr1.1:12275648-12275667 None:intergenic 45.0%
CTCATCATCATCTCCTTCCA+TGG + chr1.1:12278308-12278327 None:intergenic 45.0%
CTCATCCTTCTTCCTTCACA+AGG - chr1.1:12278644-12278663 MS.gene31688:intron 45.0%
GATAGAAAGCTAGGGAAAGG+AGG - chr1.1:12275581-12275600 MS.gene31688:CDS 45.0%
GATCTGAAAATCCAGCACCA+CGG + chr1.1:12279211-12279230 None:intergenic 45.0%
GCAAGGTGATTGGTATGTCA+TGG - chr1.1:12276630-12276649 MS.gene31688:CDS 45.0%
GCCACAACACCGTACTTATA+TGG + chr1.1:12275853-12275872 None:intergenic 45.0%
GCCATAGCAGGATCTAATAG+TGG - chr1.1:12278868-12278887 MS.gene31688:intron 45.0%
GCCCTAGTTTATGGGATGTT+TGG - chr1.1:12276759-12276778 MS.gene31688:CDS 45.0%
GCTAGTGTACATGCTCATCT+TGG - chr1.1:12277768-12277787 MS.gene31688:intron 45.0%
GTCCCACGAGTTCATTACAA+GGG - chr1.1:12276604-12276623 MS.gene31688:CDS 45.0%
GTCCCTTGTAATGAACTCGT+GGG + chr1.1:12276609-12276628 None:intergenic 45.0%
GTGTACATGCTCATCTTGGT+AGG - chr1.1:12277772-12277791 MS.gene31688:CDS 45.0%
GTTCCCCTGTTGCAAGAATA+TGG + chr1.1:12277738-12277757 None:intergenic 45.0%
GTTGTCCCAACACATCGAAA+AGG - chr1.1:12278518-12278537 MS.gene31688:intron 45.0%
TCACGTGCCGGAACAAATTA+GGG - chr1.1:12275289-12275308 MS.gene31688:CDS 45.0%
TCGGCAGTTTATTGAGTTCG+TGG - chr1.1:12278044-12278063 MS.gene31688:intron 45.0%
TGCAAACTCCACATGAGAGT+TGG - chr1.1:12276198-12276217 MS.gene31688:CDS 45.0%
TGTCCCACGAGTTCATTACA+AGG - chr1.1:12276603-12276622 MS.gene31688:CDS 45.0%
TTGGGGTCTAATGTGGCTTT+AGG - chr1.1:12277251-12277270 MS.gene31688:intron 45.0%
TTGTAAACCTGCCACTCGTA+AGG + chr1.1:12276481-12276500 None:intergenic 45.0%
TTGTACTTGATCACGTGCAG+CGG + chr1.1:12275243-12275262 None:intergenic 45.0%
TTTGTGCAACAGGTTCAGGT+GGG - chr1.1:12275536-12275555 MS.gene31688:CDS 45.0%
! AAGCTAGGGAAAGGAGGTTT+TGG - chr1.1:12275587-12275606 MS.gene31688:CDS 45.0%
! AGCACCAACTTTTCTTGGCA+AGG + chr1.1:12277496-12277515 None:intergenic 45.0%
! ATAAACTGCCGAAAAGGTGC+GGG + chr1.1:12278036-12278055 None:intergenic 45.0%
! ATCTAATAGTGGGAGCTCGT+TGG - chr1.1:12278879-12278898 MS.gene31688:intron 45.0%
! ATGGTAACGATGGTAGATGG+GGG - chr1.1:12275955-12275974 MS.gene31688:intron 45.0%
! TGAGCACCGTCAGTGTTTAT+GGG + chr1.1:12278156-12278175 None:intergenic 45.0%
! TTTTGTGCAACAGGTTCAGG+TGG - chr1.1:12275535-12275554 MS.gene31688:CDS 45.0%
!! AATGTGGCTTTAGGATCCGT+GGG - chr1.1:12277260-12277279 MS.gene31688:intron 45.0%
!! ACACATATTTTCTGGCGAGG+TGG + chr1.1:12278004-12278023 None:intergenic 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG - chr1.1:12279356-12279375 MS.gene31688:intron 45.0%
!! TAATGTGGCTTTAGGATCCG+TGG - chr1.1:12277259-12277278 MS.gene31688:intron 45.0%
!! TATCAGGTTGGACAGAAGAG+AGG - chr1.1:12278274-12278293 MS.gene31688:CDS 45.0%
!! TGGTGCTGGATTTTCAGATC+AGG - chr1.1:12279211-12279230 MS.gene31688:intron 45.0%
!! TTTCTGGTTCGAAGTTGAGG+AGG + chr1.1:12275104-12275123 None:intergenic 45.0%
!!! ATCGGGTTCGGGTTTTGATT+CGG + chr1.1:12275146-12275165 None:intergenic 45.0%
!!! TATTTTTTTTGGGGGTGGGG+GGG - chr1.1:12277151-12277170 MS.gene31688:intron 45.0%
AAACACTGACGGTGCTCAGA+AGG - chr1.1:12278158-12278177 MS.gene31688:intron 50.0%
AAACGAACAACCTCACGTGC+CGG - chr1.1:12275277-12275296 MS.gene31688:CDS 50.0%
AACCGCAGCTGATAAAGGTC+CGG - chr1.1:12275364-12275383 MS.gene31688:CDS 50.0%
AACCGGACCTTTATCAGCTG+CGG + chr1.1:12275369-12275388 None:intergenic 50.0%
AATGAACTCGTGGGACACCA+TGG + chr1.1:12276600-12276619 None:intergenic 50.0%
ACCTCTTCTACCTCGTGTAG+CGG + chr1.1:12275183-12275202 None:intergenic 50.0%
AGGTTGGACAGAAGAGAGGA+CGG - chr1.1:12278278-12278297 MS.gene31688:CDS 50.0%
ATGACCTGGTATCCTTGCCA+GGG + chr1.1:12277867-12277886 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG - chr1.1:12279197-12279216 MS.gene31688:intron 50.0%
CATGCTCATCTTGGTAGGAC+AGG - chr1.1:12277777-12277796 MS.gene31688:CDS 50.0%
CCAAAGAAGCCTAGCATGAC+TGG + chr1.1:12277069-12277088 None:intergenic 50.0%
CCAGTCATGCTAGGCTTCTT+TGG - chr1.1:12277066-12277085 MS.gene31688:intron 50.0%
CGTAAGTTCATCTCTCGTGC+TGG - chr1.1:12276798-12276817 MS.gene31688:intron 50.0%
CGTCCCTTGTAATGAACTCG+TGG + chr1.1:12276610-12276629 None:intergenic 50.0%
CGTTGGCGTGATAATTCGAC+TGG - chr1.1:12277596-12277615 MS.gene31688:intron 50.0%
CTCACGTGCCGGAACAAATT+AGG - chr1.1:12275288-12275307 MS.gene31688:CDS 50.0%
CTCCCTTCATCTTCAGCAAC+CGG + chr1.1:12275386-12275405 None:intergenic 50.0%
GGAAATCAAGCTCCACAACC+TGG + chr1.1:12279327-12279346 None:intergenic 50.0%
GGACACAGCACAATCAACTG+CGG + chr1.1:12279527-12279546 None:intergenic 50.0%
GGCAATTTCAGTTGCCAGAC+TGG - chr1.1:12277087-12277106 MS.gene31688:intron 50.0%
GGCAGGTTTACAAGTGAGTG+TGG - chr1.1:12276488-12276507 MS.gene31688:intron 50.0%
GGGCCAAGCAAAAAGTTCTC+AGG + chr1.1:12277411-12277430 None:intergenic 50.0%
GTCCGGTTGCTGAAGATGAA+GGG - chr1.1:12275381-12275400 MS.gene31688:CDS 50.0%
GTTCATTACAAGGGACGGCA+AGG - chr1.1:12276613-12276632 MS.gene31688:CDS 50.0%
TAAACCTGCCACTCGTAAGG+AGG + chr1.1:12276478-12276497 None:intergenic 50.0%
TACTAAGAACAAGAGCGGCC+TGG + chr1.1:12279423-12279442 None:intergenic 50.0%
TATGACCTGGTATCCTTGCC+AGG + chr1.1:12277868-12277887 None:intergenic 50.0%
TCTCTTCATGAGTTCCCGGA+GGG + chr1.1:12277431-12277450 None:intergenic 50.0%
TGGGAATGCCAGCAACACAA+TGG - chr1.1:12278350-12278369 MS.gene31688:intron 50.0%
TGGGCAATTGTTATGTCCCG+TGG - chr1.1:12279191-12279210 MS.gene31688:intron 50.0%
TTCTCTTCATGAGTTCCCGG+AGG + chr1.1:12277432-12277451 None:intergenic 50.0%
TTGTGCAGTGAAACCAGTGC+CGG + chr1.1:12278613-12278632 None:intergenic 50.0%
TTTGCCATGCAGCAACTCGT+TGG - chr1.1:12277579-12277598 MS.gene31688:intron 50.0%
! AACTTTTTGCTTGGCCCTCC+GGG - chr1.1:12277414-12277433 MS.gene31688:intron 50.0%
! CTGAGCACCGTCAGTGTTTA+TGG + chr1.1:12278157-12278176 None:intergenic 50.0%
! GAACTTTTTGCTTGGCCCTC+CGG - chr1.1:12277413-12277432 MS.gene31688:intron 50.0%
! GGTGTCGTGTATAGCAATCG+AGG - chr1.1:12276924-12276943 MS.gene31688:CDS 50.0%
!! AAGTACGGTGTTGTGGCCTA+TGG - chr1.1:12275856-12275875 MS.gene31688:CDS 50.0%
!! CTAATTTGTTCCGGCACGTG+AGG + chr1.1:12275290-12275309 None:intergenic 50.0%
!! CTGCACGGATTGGATATAGC+CGG - chr1.1:12277034-12277053 MS.gene31688:intron 50.0%
!! GATGATGACTGTGATAGCGG+CGG - chr1.1:12275335-12275354 MS.gene31688:CDS 50.0%
!! GCATGACTGGTTTAGCATGC+CGG + chr1.1:12277056-12277075 None:intergenic 50.0%
!! TGGGCACTGATTATGGATGC+CGG - chr1.1:12278591-12278610 MS.gene31688:intron 50.0%
ACAAGGGACGGCAAGGTGAT+TGG - chr1.1:12276620-12276639 MS.gene31688:CDS 55.0%
ACGATGGTAGATGGGGGTGA+TGG - chr1.1:12275961-12275980 MS.gene31688:intron 55.0%
AGAGGACGGTTGACCATGGA+AGG - chr1.1:12278292-12278311 MS.gene31688:CDS 55.0%
CCTCTTCTACCTCGTGTAGC+GGG + chr1.1:12275182-12275201 None:intergenic 55.0%
CTGATTATGGATGCCGGCAC+TGG - chr1.1:12278597-12278616 MS.gene31688:intron 55.0%
GAAGAGAGGACGGTTGACCA+TGG - chr1.1:12278288-12278307 MS.gene31688:CDS 55.0%
GGCCACTGCTGGAAGTAGAT+GGG - chr1.1:12279172-12279191 MS.gene31688:CDS 55.0%
GGGAGAACCGCAGCTGATAA+AGG - chr1.1:12275359-12275378 MS.gene31688:CDS 55.0%
GGTCCGGTTGCTGAAGATGA+AGG - chr1.1:12275380-12275399 MS.gene31688:CDS 55.0%
TACTTGATCACGTGCAGCGG+CGG + chr1.1:12275240-12275259 None:intergenic 55.0%
TCGGGTTTAGCGATCGGGTT+CGG + chr1.1:12275158-12275177 None:intergenic 55.0%
TGCCCATCTACTTCCAGCAG+TGG + chr1.1:12279177-12279196 None:intergenic 55.0%
TGGCCACTGCTGGAAGTAGA+TGG - chr1.1:12279171-12279190 MS.gene31688:CDS 55.0%
! GTTGGTCGTCGTATTGGTGC+CGG - chr1.1:12275620-12275639 MS.gene31688:CDS 55.0%
! TCCTCTGTCCCGCACCTTTT+CGG - chr1.1:12278025-12278044 MS.gene31688:intron 55.0%
!! ATGACTGTGATAGCGGCGGT+GGG - chr1.1:12275339-12275358 MS.gene31688:CDS 55.0%
!! TCTACCTCGTGTAGCGGGTT+CGG + chr1.1:12275177-12275196 None:intergenic 55.0%
AAACCCGAACCCGCTACACG+AGG - chr1.1:12275170-12275189 MS.gene31688:intron 60.0%
CACGCCAACGAGTTGCTGCA+TGG + chr1.1:12277586-12277605 None:intergenic 60.0%
CCCGCTACACGAGGTAGAAG+AGG - chr1.1:12275179-12275198 MS.gene31688:intron 60.0%
CGGGTTTAGCGATCGGGTTC+GGG + chr1.1:12275157-12275176 None:intergenic 60.0%
GCCACAAGGTGAGACCAGTC+TGG + chr1.1:12277104-12277123 None:intergenic 60.0%
GCTACCCTGGCAAGGATACC+AGG - chr1.1:12277860-12277879 MS.gene31688:intron 60.0%
GTCACTGCTATGGCCACTGC+TGG - chr1.1:12279161-12279180 MS.gene31688:CDS 60.0%
GTGCAACAGGTTCAGGTGGG+TGG - chr1.1:12275539-12275558 MS.gene31688:CDS 60.0%
TGGACCTCCTTACGAGTGGC+AGG - chr1.1:12276471-12276490 MS.gene31688:intron 60.0%
! CGCGCCGACCTATGAAGCAA+AGG - chr1.1:12278389-12278408 MS.gene31688:intron 60.0%
! CGGGTTCGGGTTTAGCGATC+GGG + chr1.1:12275163-12275182 None:intergenic 60.0%
! GCGGGTTCGGGTTTAGCGAT+CGG + chr1.1:12275164-12275183 None:intergenic 60.0%
!! CGGCGGCGATGGTGTTGTTA+CGG + chr1.1:12275220-12275239 None:intergenic 60.0%
!! CTACCTCGTGTAGCGGGTTC+GGG + chr1.1:12275176-12275195 None:intergenic 60.0%
!! GATGACTGTGATAGCGGCGG+TGG - chr1.1:12275338-12275357 MS.gene31688:CDS 60.0%
!! GCCAGACTGGTCTCACCTTG+TGG - chr1.1:12277100-12277119 MS.gene31688:CDS 60.0%
!! TACCTCAACAGCACCGGCAC+CGG + chr1.1:12275642-12275661 None:intergenic 60.0%
AGGGTAGCCGTCCGCGAAGA+AGG + chr1.1:12277848-12277867 None:intergenic 65.0%
TTCTTCGCGGACGGCTACCC+TGG - chr1.1:12277847-12277866 MS.gene31688:intron 65.0%
TTGATCACGTGCAGCGGCGG+CGG + chr1.1:12275237-12275256 None:intergenic 65.0%
! GCCGAAAAGGTGCGGGACAG+AGG + chr1.1:12278029-12278048 None:intergenic 65.0%
!! CGTCGTATTGGTGCCGGTGC+CGG - chr1.1:12275626-12275645 MS.gene31688:CDS 65.0%
!! TGCCGGTGCCGGTGCTGTTG+AGG - chr1.1:12275637-12275656 MS.gene31688:CDS 70.0%
CGCGGACGGCTACCCTGGCA+AGG - chr1.1:12277852-12277871 MS.gene31688:intron 75.0%
! ACGTGCAGCGGCGGCGGCGA+TGG + chr1.1:12275231-12275250 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 12275098 12279654 12275098 ID=MS.gene31688
chr1.1 mRNA 12275098 12279654 12275098 ID=MS.gene31688.t1;Parent=MS.gene31688
chr1.1 exon 12279367 12279654 12279367 ID=MS.gene31688.t1.exon1;Parent=MS.gene31688.t1
chr1.1 CDS 12279367 12279654 12279367 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12279094 12279204 12279094 ID=MS.gene31688.t1.exon2;Parent=MS.gene31688.t1
chr1.1 CDS 12279094 12279204 12279094 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12278252 12278325 12278252 ID=MS.gene31688.t1.exon3;Parent=MS.gene31688.t1
chr1.1 CDS 12278252 12278325 12278252 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12278101 12278170 12278101 ID=MS.gene31688.t1.exon4;Parent=MS.gene31688.t1
chr1.1 CDS 12278101 12278170 12278101 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12277954 12278009 12277954 ID=MS.gene31688.t1.exon5;Parent=MS.gene31688.t1
chr1.1 CDS 12277954 12278009 12277954 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12277772 12277843 12277772 ID=MS.gene31688.t1.exon6;Parent=MS.gene31688.t1
chr1.1 CDS 12277772 12277843 12277772 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12277272 12277366 12277272 ID=MS.gene31688.t1.exon7;Parent=MS.gene31688.t1
chr1.1 CDS 12277272 12277366 12277272 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12277095 12277161 12277095 ID=MS.gene31688.t1.exon8;Parent=MS.gene31688.t1
chr1.1 CDS 12277095 12277161 12277095 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12276871 12277000 12276871 ID=MS.gene31688.t1.exon9;Parent=MS.gene31688.t1
chr1.1 CDS 12276871 12277000 12276871 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12276573 12276791 12276573 ID=MS.gene31688.t1.exon10;Parent=MS.gene31688.t1
chr1.1 CDS 12276573 12276791 12276573 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12276342 12276484 12276342 ID=MS.gene31688.t1.exon11;Parent=MS.gene31688.t1
chr1.1 CDS 12276342 12276484 12276342 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12276087 12276261 12276087 ID=MS.gene31688.t1.exon12;Parent=MS.gene31688.t1
chr1.1 CDS 12276087 12276261 12276087 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12275836 12275926 12275836 ID=MS.gene31688.t1.exon13;Parent=MS.gene31688.t1
chr1.1 CDS 12275836 12275926 12275836 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12275520 12275677 12275520 ID=MS.gene31688.t1.exon14;Parent=MS.gene31688.t1
chr1.1 CDS 12275520 12275677 12275520 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12275236 12275424 12275236 ID=MS.gene31688.t1.exon15;Parent=MS.gene31688.t1
chr1.1 CDS 12275236 12275424 12275236 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
chr1.1 exon 12275098 12275157 12275098 ID=MS.gene31688.t1.exon16;Parent=MS.gene31688.t1
chr1.1 CDS 12275098 12275157 12275098 ID=cds.MS.gene31688.t1;Parent=MS.gene31688.t1
Gene Sequence

>MS.gene31688

ATGCCTCCTCAACTTCGAACCAGAAAAACCAAAAATAAACCGAATCCGAATCAAAACCCGAACCCGATCGCTAAACCCGAACCCGCTACACGAGGTAGAAGAGGTAGACCTGCTAAAAACCGTAACAACACCATCGCCGCCGCCGCTGCACGTGATCAAGTACAAGAACAACAACAACAAAACGAACAACCTCACGTGCCGGAACAAATTAGGGTTTCTGATAAGCAAGAGATTATGGATGATGACTGTGATAGCGGCGGTGGGAGAACCGCAGCTGATAAAGGTCCGGTTGCTGAAGATGAAGGGAGTACACCGCCTATTCCTGAAAAAGTAATTTTTTTTTCTTTCTTTTCTTTTAATTATCAATTTTTTTTATCTGCATGGTGTTTTTTATTAATTTTTTGTGAAATTTTGATAAAAAATTTGATTTTTAAAATTTTTGTGCAACAGGTTCAGGTGGGTGGTTCACCGATGTACAGAGTAGATAGAAAGCTAGGGAAAGGAGGTTTTGGACAAGTTTATGTTGGTCGTCGTATTGGTGCCGGTGCCGGTGCTGTTGAGGTATGATAGTATCAGTGTGTTTCTTTGTGTGTGATTTTAACTTCTGATTGAAAACAGTGATGATAAAGTATTGTCTATGTGGGAATTGATATAAAATTTGAAATCGTGATAAAAATGAATTATTGATGCTTATGATTGTAAATTGATGTCAGTGTTATTGATTGGAGTTGGCGGGTTGTGTAAAAAATTCACCATATAAGTACGGTGTTGTGGCCTATGGTGAATGTGATACAGATTGAACCTAATATCCGACGTAAAAATGAATAATTGATGCTTATGATTGAAAATTGATGTCAATGGTAACGATGGTAGATGGGGGTGATGGAAATGATCCGCCATATAAGTATGATGTTGTGGTCTATGCTGCTGTGACTGACCACATTGATTGATGTTTTTATTTTGTTGAGAAAACACAACTAATGCATTTCATTCATAATCAAAGTCTGGATACATGTAGGAATATCATAAAAACTGCAGAACTAGCATTATATGTGGCCGCTTTTGCTTAAAGCTTGAGCTACCGTATTAGTTTGTCTCCTTGCAAACTCCACATGAGAGTTGGTAATAACAATTGCTTGTTTGGAATCAACCTCAAAAAGCAAGCATTGATTGATGTTAATCTGCATTGTATGTTTATCATAAATGAAGCGTAAATAAAAGAGAGATCACCGGTGCATTCTTTTTTAATGGGGTATACATAGACTAGACCTTAGTGTGTGTAATTTGCAGTGGTTTTTTGACATTGTTTGTGCAATGAATAATTTGCAGGTGGCTTTGAAATTTGAGCATAAAACCAGTAAAGGGTGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAAGTGAGTGTGGTCTATCTTTTCCTTTCAGCTCATTTATTACCATTGTATGTTGCTAAAATTATGTTTTTTGTTTGTATGTAGTGTATTAGGAGGTAGCCATGGTGTCCCACGAGTTCATTACAAGGGACGGCAAGGTGATTGGTATGTCATGGTAAGTGCTTTTTAAAGATTTTATTTTTTTATCGAGGGCTATGGGTTTTTTATCTTTCAATTTTATTTTTTAACCTGGAATTATATTGCAGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGTAAGTTCATCTCTCGTGCTGGAATCATAGTGCAATGCAACGTGTCTTGATTTTTACTGTTGGAGTAAATAATGCTTGTTTTAACTGTATTTTCTATTTTGTGGCTTTAGGATGTCTGCTGAAATGGTGTCGTGTATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGGTGATTCTCTTCTTCCTGATCCTGTTTTTGATTTATTTGTGGATTTTTCATTACTGCACGGATTGGATATAGCCGGCATGCTAAACCAGTCATGCTAGGCTTCTTTGGCAATTTCAGTTGCCAGACTGGTCTCACCTTGTGGCTTTCACAGTTTAACAGGCTTTCTTGCATATTTTTTTTGGGGGTGGGGGGGTTACTCTTTATACCCGTAGTGTGTGTACCTAGATTAAGCTTTTTGTGTCCTTATTAGGTCAACTCAGCTTAAATTAGTTGGGGTCTAATGTGGCTTTAGGATCCGTGGGTCTAAAACCGAAAAAAAAAATGCAAATCACTTGTCTGACAATATTGAGCTCATGATTCTCATTGTTGCAAAAAATGTCATTGTGTTGCTTGCATTTGTTTCAGATACGTGCATGGTGACGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGTTTAGGTAAGTATTCTACCTTGCCAAGAAAAGTTGGTGCTTACACTTCATTGTATTTTTTCTTCTTCTAATTTCTCTTAATTTATTTATGCAATCTGCTCTCTTTTGCCATGCAGCAACTCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGATTACGATCAACGTCCAGATGTATTTAGGTAATTTATTTGCATTTCTAATTTACGGTGAATTTTCTGATCAAAATCCAGGCTTTGGTTGATTTTGATGTTGATTGCCATATTCTTGCAACAGGGGAACTGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCATACACACTAATTTTCCTTCTTCGCGGACGGCTACCCTGGCAAGGATACCAGGTCATATTTGTTTTTAATAATAACTTTAGTGATAATAGAAAATAAAAATGTTCCGTTCTAATAAAATTGTTAGCTGCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGGCAGTTTATTGAGTTCGTGGTGAATTTGAAGTTCGACGAAGAACCAAATTATGCCAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACTGACGGTGCTCAGAAGGTACTAAATTCTTCAATATTTAGAGATTACTGTTTACAGATGAGGGCTGAGTCTTGTTGCTAATATTTTCCTGGTTTGTGCTGTTAAGCTTATTTATCAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGGAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCGCGCCGACCTATGAAGCAAAGGTTTTCTTCTGAAGTTAAATGAGTCTTTATGGCCAATGTTAAAATGATCAGAGACTAAGTTTTTTATTCTTTTTGTCCAGGTACCATTACAATGTTGCTGATATGCGGTTGTCCCAACACATCGAAAAGGGATATGAAGATGGGTTATTTATCAGTAGTGTAGGTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTTCTTCCTTCACAAGGTTGTTATTTTTTGCTTTTGTTCATTACTTAGTAATATGTCATTTATGTTAGTAATATCATGTTTATACTTCATAGTTCATATCTGATATAATGTATTCTTCACTGTATTGGAACTTGGTGCATGTTGAAGAACTAATATAACTACTTTTGTTTTTATAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTACATCAGTGCCATAGCAGGATCTAATAGTGGGAGCTCGTTGGTTGTAATGTCGAAAGGTAATTCGTTAAAGCTCTATTCTTCAGGCATTTGGTATTTTGGCGACAGTAATTGACTATATTGTATTAGGTTATTTTGCATATTTTGGCTTGTAGTGTTGAGTTTAGTTCCTGTGTGACTATGTCTCTCACTTCTACTGGTGATTTGTTGGTTTCAGGGACCCAATACTTGCAGCAATCTTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTCGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTCTACTTTTTTCTTTTTAAAAAATGTTATATTAAGTTTTTTTTAGTTGCGCTTATACCATATGTGATGTTTTCTCTTCTAAAATTAATTCCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATTACTTCAACTGCTGCTACATATGACCAGGCCGCTCTTGTTCTTAGTATTCCAAGAAGAAAACCGACTGATGAAACTCAAGAAACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAGGTAAATACCGCAGTTGATTGTGCTGTGTCCATAGTCTTCTTTAATCATGAAAGCTTATGTTTGATGTTATTTTTGCAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGAAGAACTGTTTCATGA
Protein sequence

>MS.gene31688.t1

MPPQLRTRKTKNKPNPNQNPNPIAKPEPATRGRRGRPAKNRNNTIAAAAARDQVQEQQQQNEQPHVPEQIRVSDKQEIMDDDCDSGGGRTAADKGPVQVGGSPMYRVDRKLGKGGFGQVYVGRRIGAGAGAVEVALKFEHKTSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEFVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEGDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSFFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKEKWAKNLYIASICYGRTVS