Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31710.t1 | XP_013465670.1 | 95.5 | 422 | 19 | 0 | 1 | 422 | 1 | 422 | 3.00E-236 | 827.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31710.t1 | Q8LPI7 | 59.8 | 415 | 147 | 3 | 1 | 407 | 1 | 403 | 5.9e-140 | 498.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31710.t1 | A0A072VDN0 | 95.5 | 422 | 19 | 0 | 1 | 422 | 1 | 422 | 2.2e-236 | 827.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene31710 | 0.860297 | 2.28E-63 | -1.69E-46 |
| MS.gene049281 | MS.gene31710 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene049313 | MS.gene31710 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene31710 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene050493 | MS.gene31710 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene056761 | MS.gene31710 | 0.816174 | 6.34E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31710.t1 | MTR_1g004990 | 95.498 | 422 | 19 | 0 | 1 | 422 | 1 | 422 | 0.0 | 842 |
| MS.gene31710.t1 | MTR_3g110180 | 61.395 | 430 | 159 | 2 | 1 | 423 | 1 | 430 | 0.0 | 530 |
| MS.gene31710.t1 | MTR_3g110180 | 61.395 | 430 | 158 | 3 | 1 | 423 | 1 | 429 | 0.0 | 526 |
| MS.gene31710.t1 | MTR_6g087070 | 71.914 | 324 | 90 | 1 | 1 | 323 | 1 | 324 | 1.49e-178 | 504 |
| MS.gene31710.t1 | MTR_8g102930 | 59.674 | 429 | 162 | 5 | 1 | 423 | 1 | 424 | 1.45e-177 | 502 |
| MS.gene31710.t1 | MTR_4g126010 | 66.565 | 329 | 107 | 1 | 1 | 326 | 1 | 329 | 8.37e-166 | 473 |
| MS.gene31710.t1 | MTR_2g099670 | 54.953 | 424 | 164 | 4 | 1 | 415 | 1 | 406 | 6.93e-165 | 472 |
| MS.gene31710.t1 | MTR_2g039930 | 65.350 | 329 | 111 | 1 | 1 | 326 | 1 | 329 | 3.50e-163 | 468 |
| MS.gene31710.t1 | MTR_1g042280 | 67.516 | 314 | 102 | 0 | 1 | 314 | 2 | 315 | 1.19e-162 | 466 |
| MS.gene31710.t1 | MTR_1g069720 | 69.492 | 295 | 90 | 0 | 1 | 295 | 1 | 295 | 6.35e-161 | 461 |
| MS.gene31710.t1 | MTR_1g075870 | 66.242 | 314 | 106 | 0 | 1 | 314 | 2 | 315 | 1.05e-160 | 456 |
| MS.gene31710.t1 | MTR_1g075870 | 66.242 | 314 | 106 | 0 | 1 | 314 | 2 | 315 | 5.27e-160 | 459 |
| MS.gene31710.t1 | MTR_8g018310 | 65.517 | 319 | 109 | 1 | 1 | 319 | 1 | 318 | 3.19e-159 | 457 |
| MS.gene31710.t1 | MTR_8g018310 | 65.517 | 319 | 109 | 1 | 1 | 319 | 1 | 318 | 3.23e-158 | 452 |
| MS.gene31710.t1 | MTR_7g097160 | 63.190 | 326 | 116 | 1 | 1 | 322 | 1 | 326 | 5.41e-157 | 451 |
| MS.gene31710.t1 | MTR_1g042280 | 68.000 | 275 | 88 | 0 | 40 | 314 | 9 | 283 | 7.35e-143 | 409 |
| MS.gene31710.t1 | MTR_0492s0030 | 61.022 | 313 | 120 | 1 | 1 | 311 | 1 | 313 | 1.56e-140 | 406 |
| MS.gene31710.t1 | MTR_0543s0020 | 61.022 | 313 | 120 | 1 | 1 | 311 | 1 | 313 | 1.56e-140 | 406 |
| MS.gene31710.t1 | MTR_1g075870 | 68.093 | 257 | 82 | 0 | 58 | 314 | 2 | 258 | 1.59e-133 | 385 |
| MS.gene31710.t1 | MTR_2g099670 | 53.168 | 363 | 143 | 4 | 62 | 415 | 10 | 354 | 5.59e-133 | 389 |
| MS.gene31710.t1 | MTR_2g039930 | 64.516 | 248 | 85 | 1 | 82 | 326 | 1 | 248 | 1.10e-118 | 351 |
| MS.gene31710.t1 | MTR_7g097160 | 62.842 | 183 | 64 | 1 | 144 | 322 | 25 | 207 | 6.57e-78 | 245 |
| MS.gene31710.t1 | MTR_1g007150 | 38.163 | 283 | 161 | 7 | 2 | 273 | 114 | 393 | 3.09e-54 | 191 |
| MS.gene31710.t1 | MTR_1g116210 | 37.857 | 280 | 160 | 6 | 5 | 273 | 113 | 389 | 3.52e-54 | 191 |
| MS.gene31710.t1 | MTR_7g006030 | 35.789 | 285 | 164 | 6 | 5 | 273 | 31 | 312 | 6.07e-53 | 186 |
| MS.gene31710.t1 | MTR_3g110240 | 36.749 | 283 | 165 | 7 | 2 | 273 | 111 | 390 | 4.59e-52 | 185 |
| MS.gene31710.t1 | MTR_7g085540 | 35.106 | 282 | 167 | 5 | 9 | 277 | 147 | 425 | 1.20e-49 | 179 |
| MS.gene31710.t1 | MTR_8g014050 | 34.043 | 282 | 164 | 6 | 9 | 273 | 128 | 404 | 4.44e-46 | 169 |
| MS.gene31710.t1 | MTR_7g116400 | 44.444 | 81 | 37 | 2 | 82 | 154 | 3 | 83 | 1.25e-15 | 72.4 |
| MS.gene31710.t1 | MTR_5g022030 | 27.854 | 219 | 142 | 5 | 2 | 213 | 92 | 301 | 2.22e-14 | 75.5 |
| MS.gene31710.t1 | MTR_5g022030 | 27.854 | 219 | 142 | 5 | 2 | 213 | 92 | 301 | 3.23e-14 | 74.7 |
| MS.gene31710.t1 | MTR_8g099095 | 29.717 | 212 | 131 | 7 | 9 | 213 | 66 | 266 | 2.15e-13 | 72.4 |
| MS.gene31710.t1 | MTR_4g132860 | 27.881 | 269 | 164 | 9 | 11 | 269 | 82 | 330 | 2.17e-13 | 71.6 |
| MS.gene31710.t1 | MTR_5g075060 | 27.016 | 248 | 146 | 9 | 3 | 236 | 6 | 232 | 2.35e-13 | 72.0 |
| MS.gene31710.t1 | MTR_5g009830 | 28.182 | 220 | 132 | 6 | 5 | 213 | 63 | 267 | 2.38e-13 | 71.6 |
| MS.gene31710.t1 | MTR_5g009830 | 28.182 | 220 | 132 | 6 | 5 | 213 | 63 | 267 | 2.89e-13 | 72.0 |
| MS.gene31710.t1 | MTR_8g079790 | 26.106 | 226 | 144 | 5 | 1 | 213 | 117 | 332 | 2.90e-13 | 72.0 |
| MS.gene31710.t1 | MTR_3g098090 | 29.114 | 237 | 147 | 7 | 9 | 238 | 32 | 254 | 3.74e-13 | 71.6 |
| MS.gene31710.t1 | MTR_4g128820 | 28.326 | 233 | 144 | 8 | 7 | 232 | 8 | 224 | 4.37e-13 | 71.2 |
| MS.gene31710.t1 | MTR_3g466400 | 27.500 | 240 | 153 | 9 | 4 | 236 | 9 | 234 | 5.76e-13 | 70.9 |
| MS.gene31710.t1 | MTR_0028s0170 | 29.545 | 220 | 129 | 8 | 5 | 213 | 74 | 278 | 6.30e-13 | 70.9 |
| MS.gene31710.t1 | MTR_7g116390 | 25.424 | 236 | 157 | 5 | 8 | 237 | 15 | 237 | 2.65e-12 | 67.4 |
| MS.gene31710.t1 | MTR_5g067150 | 25.439 | 228 | 151 | 6 | 7 | 227 | 7 | 222 | 3.55e-12 | 67.8 |
| MS.gene31710.t1 | MTR_1g101630 | 26.582 | 237 | 155 | 7 | 8 | 238 | 40 | 263 | 4.08e-12 | 68.2 |
| MS.gene31710.t1 | MTR_5g067150 | 26.201 | 229 | 148 | 7 | 7 | 227 | 7 | 222 | 4.18e-12 | 67.8 |
| MS.gene31710.t1 | MTR_5g067150 | 26.201 | 229 | 148 | 7 | 7 | 227 | 7 | 222 | 5.35e-12 | 67.8 |
| MS.gene31710.t1 | MTR_7g073520 | 26.923 | 234 | 149 | 7 | 9 | 236 | 148 | 365 | 5.87e-12 | 67.8 |
| MS.gene31710.t1 | MTR_5g017890 | 24.252 | 301 | 195 | 10 | 8 | 293 | 371 | 653 | 7.25e-12 | 67.8 |
| MS.gene31710.t1 | MTR_7g118020 | 25.339 | 221 | 145 | 5 | 3 | 213 | 138 | 348 | 1.05e-11 | 67.0 |
| MS.gene31710.t1 | MTR_7g072710 | 26.552 | 290 | 167 | 14 | 11 | 278 | 47 | 312 | 1.13e-11 | 66.2 |
| MS.gene31710.t1 | MTR_8g095440 | 27.014 | 211 | 138 | 5 | 9 | 213 | 30 | 230 | 1.64e-11 | 65.9 |
| MS.gene31710.t1 | MTR_1g026190 | 27.234 | 235 | 150 | 7 | 9 | 234 | 78 | 300 | 2.91e-11 | 65.5 |
| MS.gene31710.t1 | MTR_3g099920 | 25.847 | 236 | 129 | 8 | 9 | 224 | 19 | 228 | 2.97e-11 | 65.5 |
| MS.gene31710.t1 | MTR_2g049790 | 29.279 | 222 | 128 | 11 | 6 | 214 | 20 | 225 | 3.66e-11 | 65.1 |
| MS.gene31710.t1 | MTR_4g086660 | 26.222 | 225 | 142 | 6 | 1 | 213 | 129 | 341 | 3.85e-11 | 65.5 |
| MS.gene31710.t1 | MTR_7g106730 | 25.822 | 213 | 142 | 5 | 9 | 215 | 88 | 290 | 3.99e-11 | 64.7 |
| MS.gene31710.t1 | MTR_8g095440 | 27.014 | 211 | 138 | 5 | 9 | 213 | 30 | 230 | 4.17e-11 | 65.1 |
| MS.gene31710.t1 | MTR_5g007590 | 44.776 | 67 | 29 | 1 | 79 | 145 | 61 | 119 | 4.78e-11 | 60.5 |
| MS.gene31710.t1 | MTR_4g066660 | 29.586 | 169 | 109 | 4 | 8 | 167 | 71 | 238 | 4.82e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31710.t1 | AT4G28860 | 59.615 | 416 | 148 | 3 | 1 | 408 | 1 | 404 | 0.0 | 512 |
| MS.gene31710.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 1.60e-178 | 504 |
| MS.gene31710.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 1.60e-178 | 504 |
| MS.gene31710.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 1.60e-178 | 504 |
| MS.gene31710.t1 | AT4G28880 | 57.895 | 418 | 164 | 4 | 1 | 413 | 1 | 411 | 1.60e-178 | 504 |
| MS.gene31710.t1 | AT4G28860 | 64.208 | 366 | 119 | 2 | 1 | 366 | 1 | 354 | 2.18e-177 | 500 |
| MS.gene31710.t1 | AT5G57015 | 67.722 | 316 | 102 | 0 | 1 | 316 | 1 | 316 | 6.68e-165 | 471 |
| MS.gene31710.t1 | AT4G26100 | 60.278 | 360 | 139 | 2 | 1 | 359 | 1 | 357 | 3.12e-164 | 469 |
| MS.gene31710.t1 | AT3G23340 | 55.528 | 398 | 172 | 2 | 1 | 396 | 1 | 395 | 9.05e-160 | 458 |
| MS.gene31710.t1 | AT1G72710 | 65.217 | 322 | 111 | 1 | 1 | 322 | 1 | 321 | 1.94e-159 | 458 |
| MS.gene31710.t1 | AT5G44100 | 68.121 | 298 | 95 | 0 | 1 | 298 | 1 | 298 | 4.28e-158 | 455 |
| MS.gene31710.t1 | AT5G44100 | 68.121 | 298 | 95 | 0 | 1 | 298 | 1 | 298 | 4.28e-158 | 455 |
| MS.gene31710.t1 | AT1G03930 | 66.779 | 298 | 99 | 0 | 1 | 298 | 1 | 298 | 3.35e-157 | 452 |
| MS.gene31710.t1 | AT2G19470 | 53.545 | 409 | 175 | 3 | 1 | 409 | 1 | 394 | 3.76e-156 | 448 |
| MS.gene31710.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 2.20e-154 | 446 |
| MS.gene31710.t1 | AT4G28540 | 66.102 | 295 | 100 | 0 | 1 | 295 | 5 | 299 | 3.88e-154 | 445 |
| MS.gene31710.t1 | AT4G14340 | 59.420 | 345 | 140 | 0 | 1 | 345 | 7 | 351 | 7.07e-153 | 441 |
| MS.gene31710.t1 | AT1G04440 | 66.443 | 298 | 100 | 0 | 1 | 298 | 1 | 298 | 9.90e-153 | 441 |
| MS.gene31710.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 1.24e-152 | 437 |
| MS.gene31710.t1 | AT5G43320 | 67.114 | 298 | 98 | 0 | 1 | 298 | 1 | 298 | 1.24e-152 | 437 |
| MS.gene31710.t1 | AT4G14340 | 61.963 | 326 | 124 | 0 | 1 | 326 | 7 | 332 | 2.87e-152 | 436 |
| MS.gene31710.t1 | AT3G23340 | 52.261 | 398 | 171 | 3 | 1 | 396 | 1 | 381 | 1.60e-145 | 421 |
| MS.gene31710.t1 | AT4G08800 | 57.047 | 298 | 96 | 2 | 1 | 298 | 1 | 266 | 1.32e-122 | 357 |
| MS.gene31710.t1 | AT2G25760 | 36.786 | 280 | 162 | 4 | 9 | 273 | 107 | 386 | 6.30e-55 | 193 |
| MS.gene31710.t1 | AT3G13670 | 35.986 | 289 | 166 | 6 | 5 | 277 | 131 | 416 | 1.22e-53 | 190 |
| MS.gene31710.t1 | AT2G25760 | 36.786 | 280 | 159 | 5 | 9 | 273 | 107 | 383 | 1.80e-53 | 189 |
| MS.gene31710.t1 | AT3G03940 | 35.461 | 282 | 166 | 5 | 9 | 277 | 140 | 418 | 2.36e-50 | 181 |
| MS.gene31710.t1 | AT5G18190 | 35.106 | 282 | 167 | 5 | 9 | 277 | 130 | 408 | 3.27e-50 | 181 |
| MS.gene31710.t1 | AT5G18190 | 35.106 | 282 | 167 | 5 | 9 | 277 | 130 | 408 | 3.27e-50 | 181 |
| MS.gene31710.t1 | AT3G06030 | 29.412 | 221 | 127 | 7 | 8 | 213 | 67 | 273 | 2.21e-14 | 75.5 |
| MS.gene31710.t1 | AT4G36070 | 27.523 | 218 | 141 | 6 | 8 | 217 | 70 | 278 | 3.42e-14 | 74.7 |
| MS.gene31710.t1 | AT2G17890 | 27.700 | 213 | 138 | 5 | 8 | 213 | 107 | 310 | 4.19e-14 | 74.7 |
| MS.gene31710.t1 | AT4G36070 | 27.523 | 218 | 141 | 6 | 8 | 217 | 70 | 278 | 5.11e-14 | 74.3 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 5.49e-14 | 73.9 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 6.24e-14 | 73.9 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 6.40e-14 | 73.6 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 6.40e-14 | 73.6 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 8.95e-14 | 73.6 |
| MS.gene31710.t1 | AT5G66210 | 27.830 | 212 | 137 | 5 | 9 | 213 | 62 | 264 | 8.95e-14 | 73.6 |
| MS.gene31710.t1 | AT2G46700 | 27.354 | 223 | 138 | 7 | 3 | 213 | 137 | 347 | 1.62e-13 | 72.8 |
| MS.gene31710.t1 | AT5G66850 | 27.039 | 233 | 147 | 7 | 5 | 224 | 342 | 564 | 2.58e-13 | 72.4 |
| MS.gene31710.t1 | AT5G66850 | 27.039 | 233 | 147 | 7 | 5 | 224 | 342 | 564 | 2.67e-13 | 72.4 |
| MS.gene31710.t1 | AT3G49370 | 27.854 | 219 | 138 | 6 | 7 | 215 | 140 | 348 | 5.27e-13 | 71.2 |
| MS.gene31710.t1 | AT1G62400 | 28.090 | 267 | 162 | 9 | 11 | 267 | 88 | 334 | 5.72e-13 | 70.5 |
| MS.gene31710.t1 | AT3G53930 | 25.000 | 268 | 174 | 6 | 5 | 254 | 16 | 274 | 6.75e-13 | 71.2 |
| MS.gene31710.t1 | AT3G53930 | 25.000 | 268 | 174 | 6 | 5 | 254 | 16 | 274 | 6.81e-13 | 71.2 |
| MS.gene31710.t1 | AT5G25110 | 25.726 | 241 | 158 | 8 | 3 | 236 | 37 | 263 | 7.83e-13 | 70.5 |
| MS.gene31710.t1 | AT3G50530 | 26.009 | 223 | 145 | 5 | 1 | 213 | 140 | 352 | 1.65e-12 | 69.7 |
| MS.gene31710.t1 | AT4G14580 | 27.511 | 229 | 134 | 9 | 2 | 213 | 10 | 223 | 2.16e-12 | 68.9 |
| MS.gene31710.t1 | AT5G10930 | 25.620 | 242 | 158 | 8 | 3 | 236 | 6 | 233 | 2.37e-12 | 68.9 |
| MS.gene31710.t1 | AT4G23650 | 29.630 | 216 | 130 | 6 | 9 | 215 | 78 | 280 | 2.64e-12 | 68.9 |
| MS.gene31710.t1 | AT3G23000 | 26.068 | 234 | 152 | 8 | 3 | 227 | 19 | 240 | 4.05e-12 | 68.2 |
| MS.gene31710.t1 | AT2G31500 | 28.111 | 217 | 130 | 7 | 8 | 213 | 65 | 266 | 5.59e-12 | 68.2 |
| MS.gene31710.t1 | AT1G51660 | 25.882 | 255 | 156 | 10 | 12 | 255 | 82 | 314 | 5.80e-12 | 67.4 |
| MS.gene31710.t1 | AT3G08720 | 25.431 | 232 | 154 | 6 | 9 | 236 | 140 | 356 | 6.23e-12 | 67.8 |
| MS.gene31710.t1 | AT3G08720 | 25.431 | 232 | 154 | 6 | 9 | 236 | 140 | 356 | 6.23e-12 | 67.8 |
| MS.gene31710.t1 | AT3G08720 | 25.431 | 232 | 154 | 6 | 9 | 236 | 140 | 356 | 6.23e-12 | 67.8 |
| MS.gene31710.t1 | AT3G08720 | 25.431 | 232 | 154 | 6 | 9 | 236 | 140 | 356 | 6.23e-12 | 67.8 |
| MS.gene31710.t1 | AT1G01140 | 27.686 | 242 | 145 | 12 | 7 | 236 | 17 | 240 | 8.64e-12 | 67.0 |
| MS.gene31710.t1 | AT1G01140 | 27.686 | 242 | 145 | 12 | 7 | 236 | 17 | 240 | 9.27e-12 | 67.0 |
| MS.gene31710.t1 | AT1G08650 | 26.829 | 246 | 147 | 9 | 8 | 240 | 14 | 239 | 1.28e-11 | 65.5 |
| MS.gene31710.t1 | AT1G08650 | 26.033 | 242 | 154 | 7 | 8 | 240 | 14 | 239 | 1.62e-11 | 65.1 |
| MS.gene31710.t1 | AT3G08730 | 26.050 | 238 | 156 | 7 | 4 | 236 | 128 | 350 | 1.91e-11 | 66.2 |
| MS.gene31710.t1 | AT3G08730 | 26.050 | 238 | 156 | 7 | 4 | 236 | 128 | 350 | 1.91e-11 | 66.2 |
| MS.gene31710.t1 | AT4G24400 | 25.200 | 250 | 156 | 8 | 7 | 249 | 7 | 232 | 2.06e-11 | 65.9 |
| MS.gene31710.t1 | AT5G24430 | 27.397 | 219 | 139 | 7 | 7 | 215 | 141 | 349 | 2.57e-11 | 65.9 |
| MS.gene31710.t1 | AT5G21326 | 26.506 | 249 | 139 | 10 | 7 | 236 | 11 | 234 | 2.87e-11 | 65.5 |
| MS.gene31710.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 19 | 217 | 2.98e-11 | 65.5 |
| MS.gene31710.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 19 | 217 | 2.98e-11 | 65.5 |
| MS.gene31710.t1 | AT3G01090 | 30.047 | 213 | 127 | 9 | 9 | 213 | 42 | 240 | 3.00e-11 | 65.5 |
| MS.gene31710.t1 | AT4G24400 | 25.200 | 250 | 156 | 8 | 7 | 249 | 7 | 232 | 3.39e-11 | 65.1 |
| MS.gene31710.t1 | AT1G35670 | 27.586 | 232 | 149 | 7 | 9 | 234 | 26 | 244 | 4.23e-11 | 65.1 |
| MS.gene31710.t1 | AT1G67580 | 27.848 | 237 | 143 | 8 | 14 | 240 | 411 | 629 | 4.55e-11 | 65.5 |
| MS.gene31710.t1 | AT1G67580 | 27.848 | 237 | 143 | 8 | 14 | 240 | 411 | 629 | 4.55e-11 | 65.5 |
| MS.gene31710.t1 | AT1G01140 | 27.686 | 242 | 147 | 12 | 7 | 236 | 17 | 242 | 5.20e-11 | 64.7 |
| MS.gene31710.t1 | AT4G32830 | 26.160 | 237 | 145 | 9 | 9 | 236 | 31 | 246 | 5.54e-11 | 63.5 |
| MS.gene31710.t1 | AT2G38910 | 27.488 | 211 | 137 | 6 | 9 | 213 | 134 | 334 | 8.23e-11 | 64.3 |
Find 98 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTAGTTCTTGAACTTA+TGG | 0.162372 | 1.1:-12625786 | MS.gene31710:CDS |
| GAGGTTTCCACAATCGTTTC+TGG | 0.171165 | 1.1:+12622900 | None:intergenic |
| TCCACAATCGTTTCTGGTTT+TGG | 0.174122 | 1.1:+12622906 | None:intergenic |
| GTACCAAACCATTTCATTCT+TGG | 0.227657 | 1.1:+12625824 | None:intergenic |
| CATTAGACTAACCTTCTTAA+TGG | 0.235709 | 1.1:+12626621 | None:intergenic |
| TATAGAGTTGGTAGGAAAAT+TGG | 0.237607 | 1.1:-12626797 | MS.gene31710:CDS |
| CAGGTTTGTATGATTGATTT+TGG | 0.247101 | 1.1:-12624961 | MS.gene31710:CDS |
| CAAACCGGATAACTTTCTTA+TGG | 0.257400 | 1.1:-12625159 | MS.gene31710:CDS |
| TCATTTGGTGAAATTTATAT+TGG | 0.266055 | 1.1:-12626767 | MS.gene31710:intron |
| AAGTTATATAATATTCTTAA+AGG | 0.281266 | 1.1:-12625968 | MS.gene31710:CDS |
| GTTCTAGTTCTTGAACTTAT+GGG | 0.300809 | 1.1:-12625785 | MS.gene31710:CDS |
| TTCGATCAACGACCAGATTA+TGG | 0.303765 | 1.1:-12623908 | MS.gene31710:CDS |
| GCAAAGCCGCAGAGATGATT+TGG | 0.307778 | 1.1:-12624357 | MS.gene31710:CDS |
| AAACCGGATAACTTTCTTAT+GGG | 0.337171 | 1.1:-12625158 | MS.gene31710:CDS |
| CGTGAATTGTTCACTTCTAA+AGG | 0.340115 | 1.1:-12623866 | MS.gene31710:intron |
| GATAACTTTCTTATGGGTCT+TGG | 0.366159 | 1.1:-12625152 | MS.gene31710:CDS |
| GTTACAAGCATATCCCTTAC+AGG | 0.376749 | 1.1:-12624909 | MS.gene31710:intron |
| TCAGGAGATTCAACAGATAA+AGG | 0.377164 | 1.1:-12623608 | MS.gene31710:CDS |
| CGCTTCAAATATCCATAATC+TGG | 0.378050 | 1.1:+12623896 | None:intergenic |
| CACATCCTCTGGTTCAATAC+TGG | 0.381850 | 1.1:+12623349 | None:intergenic |
| TAGAAAATCTTATACCTGTA+AGG | 0.385287 | 1.1:+12624895 | None:intergenic |
| TCAAACCCGGATGGTGTGTT+GGG | 0.392811 | 1.1:-12622879 | MS.gene31710:CDS |
| TTGGACTTTCAAAAGGATAC+AGG | 0.395538 | 1.1:-12624942 | MS.gene31710:CDS |
| AAAATTGGTAGTGGATCATT+TGG | 0.395776 | 1.1:-12626782 | MS.gene31710:CDS |
| GTACCTTACCATCTACTTGA+TGG | 0.397382 | 1.1:+12622803 | None:intergenic |
| ATACTGGTAGGCACGGCAAC+TGG | 0.401062 | 1.1:+12623365 | None:intergenic |
| CACGTGTTTGTATGAAGCTC+AGG | 0.404014 | 1.1:-12623143 | MS.gene31710:CDS |
| AGCAATACTCACAAAGGAAT+TGG | 0.405316 | 1.1:-12624488 | MS.gene31710:intron |
| ATTCCAAGAATGAAATGGTT+TGG | 0.419642 | 1.1:-12625827 | MS.gene31710:CDS |
| ATAACTTTCTTATGGGTCTT+GGG | 0.425665 | 1.1:-12625151 | MS.gene31710:CDS |
| CATACAAACACGTGGACGTT+CGG | 0.428322 | 1.1:+12623152 | None:intergenic |
| TTACTCCCCAACACACCATC+CGG | 0.429287 | 1.1:+12622873 | None:intergenic |
| CAACACACCATCCGGGTTTG+AGG | 0.433407 | 1.1:+12622881 | None:intergenic |
| TTTGATGTTGGCCGATCAAA+TGG | 0.434639 | 1.1:-12625705 | MS.gene31710:intron |
| CATGATACGCATACCTCAAC+GGG | 0.441391 | 1.1:+12624097 | None:intergenic |
| GTGGTATTCCAAGAATGAAA+TGG | 0.445472 | 1.1:-12625832 | MS.gene31710:CDS |
| ATGCTGACTATTTATATGAC+TGG | 0.453335 | 1.1:-12623645 | MS.gene31710:CDS |
| AAGTGAACAATTCACGAAAC+AGG | 0.453549 | 1.1:+12623873 | None:intergenic |
| GATAGAGTATTTACATTCCA+AGG | 0.456851 | 1.1:-12625201 | MS.gene31710:CDS |
| TCTTGGGAAGAAAGCAAATC+AGG | 0.466032 | 1.1:-12625135 | MS.gene31710:intron |
| GTTGGAGGAAAGTATAGAGT+TGG | 0.472527 | 1.1:-12626809 | MS.gene31710:CDS |
| ATCTCTGTGTAGTAATCCCT+TGG | 0.476514 | 1.1:+12625184 | None:intergenic |
| TGAGCTTGTGGCCATTAAGA+AGG | 0.478601 | 1.1:-12626632 | MS.gene31710:intron |
| GGTGTGTTGGGGAGTAAATG+TGG | 0.479979 | 1.1:-12622867 | MS.gene31710:CDS |
| GTAGGCATGACAGTGGAAAC+AGG | 0.480866 | 1.1:+12622939 | None:intergenic |
| AGAGATGATTTGGAGTCTCT+TGG | 0.485541 | 1.1:-12624347 | MS.gene31710:CDS |
| GTATGCTCATCCACATCCTC+TGG | 0.492959 | 1.1:+12623338 | None:intergenic |
| CTCAAACCCGGATGGTGTGT+TGG | 0.498181 | 1.1:-12622880 | MS.gene31710:CDS |
| CAGTATTGAACCAGAGGATG+TGG | 0.498938 | 1.1:-12623348 | MS.gene31710:CDS |
| TTGATGGAAAAGGTTGTTGG+AGG | 0.500008 | 1.1:-12626824 | MS.gene31710:CDS |
| ACAACCACAGCTACTATATG+AGG | 0.509476 | 1.1:-12625993 | MS.gene31710:CDS |
| ACTTCCCACTACAGTAGTAA+AGG | 0.514128 | 1.1:+12625744 | None:intergenic |
| ATCAATGATTACCATTTGAT+CGG | 0.517254 | 1.1:+12625694 | None:intergenic |
| ATGTGGTGCTTCTGATGACT+TGG | 0.519856 | 1.1:-12622850 | MS.gene31710:CDS |
| TGTTGTGACTTCTGAGCTTG+TGG | 0.519886 | 1.1:-12626644 | MS.gene31710:CDS |
| AGAAAATCTTATACCTGTAA+GGG | 0.525824 | 1.1:+12624896 | None:intergenic |
| ATGAAATGGTTTGGTACTGA+TGG | 0.526555 | 1.1:-12625818 | MS.gene31710:CDS |
| GGGATATGCTTGTAACTGAT+AGG | 0.529353 | 1.1:+12624916 | None:intergenic |
| GAGGATGTGGATGAGCATAC+AGG | 0.543688 | 1.1:-12623335 | MS.gene31710:intron |
| TCTACTTGATGGATGAAACT+TGG | 0.546328 | 1.1:+12622814 | None:intergenic |
| AGACCCATAAGAAAGTTATC+CGG | 0.547262 | 1.1:+12625155 | None:intergenic |
| CTTGCAGACCTTGCCAAGGA+AGG | 0.550925 | 1.1:+12624173 | None:intergenic |
| TTCTAGTTCTTGAACTTATG+GGG | 0.551546 | 1.1:-12625784 | MS.gene31710:CDS |
| TACTCCCCAACACACCATCC+GGG | 0.552601 | 1.1:+12622874 | None:intergenic |
| GTTGGTAGGAAAATTGGTAG+TGG | 0.554470 | 1.1:-12626791 | MS.gene31710:CDS |
| TAAAGGAGGTCGTCGAGACT+CGG | 0.558842 | 1.1:+12625761 | None:intergenic |
| TTATATAATATTCTTAAAGG+AGG | 0.558963 | 1.1:-12625965 | MS.gene31710:CDS |
| ATAGAGTATTTACATTCCAA+GGG | 0.572950 | 1.1:-12625200 | MS.gene31710:CDS |
| ACCTCCTTTACTACTGTAGT+GGG | 0.573795 | 1.1:-12625748 | MS.gene31710:CDS |
| GACCTCCTTTACTACTGTAG+TGG | 0.577698 | 1.1:-12625749 | MS.gene31710:CDS |
| GAGGAAAGTATAGAGTTGGT+AGG | 0.580361 | 1.1:-12626805 | MS.gene31710:CDS |
| TTCTTTGATGACAGCTTACG+AGG | 0.582045 | 1.1:-12625223 | MS.gene31710:intron |
| TTTGCCTCATATAGTAGCTG+TGG | 0.584195 | 1.1:+12625989 | None:intergenic |
| TGGACTTTCAAAAGGATACA+GGG | 0.587624 | 1.1:-12624941 | MS.gene31710:CDS |
| TCCAAAACCAGAAACGATTG+TGG | 0.591590 | 1.1:-12622907 | MS.gene31710:CDS |
| ACTACACAGAGATATCAAAC+CGG | 0.594392 | 1.1:-12625174 | MS.gene31710:CDS |
| TGTTTCCACTGTCATGCCTA+CGG | 0.604626 | 1.1:-12622937 | MS.gene31710:CDS |
| ACATGATACGCATACCTCAA+CGG | 0.612124 | 1.1:+12624096 | None:intergenic |
| GATGAAACTTGGTCTAGTGA+AGG | 0.612154 | 1.1:+12622825 | None:intergenic |
| GCCTACCAGTATTGAACCAG+AGG | 0.614006 | 1.1:-12623354 | MS.gene31710:CDS |
| TGGTTCAATACTGGTAGGCA+CGG | 0.622152 | 1.1:+12623358 | None:intergenic |
| CAAACCCGGATGGTGTGTTG+GGG | 0.624054 | 1.1:-12622878 | MS.gene31710:CDS |
| AAGTAAGAAGCAAACTCCAC+GGG | 0.633022 | 1.1:+12623953 | None:intergenic |
| AAAGTAAGAAGCAAACTCCA+CGG | 0.637426 | 1.1:+12623952 | None:intergenic |
| GCAAGTAGCAATACTCACAA+AGG | 0.640002 | 1.1:-12624494 | MS.gene31710:CDS |
| GATTGTGGAAACCTCAAACC+CGG | 0.641112 | 1.1:-12622892 | MS.gene31710:CDS |
| GCAGCTTGCAGACCTTGCCA+AGG | 0.651297 | 1.1:+12624169 | None:intergenic |
| ACGTGTTTGTATGAAGCTCA+GGG | 0.653358 | 1.1:-12623142 | MS.gene31710:CDS |
| TGGTCGTTGATCGAATGTCA+AGG | 0.653518 | 1.1:+12623916 | None:intergenic |
| CTGAGCTTCATACAAACACG+TGG | 0.660997 | 1.1:+12623144 | None:intergenic |
| TCCTCTGGTTCAATACTGGT+AGG | 0.662946 | 1.1:+12623353 | None:intergenic |
| GTTGATCGAATGTCAAGGAG+TGG | 0.664837 | 1.1:+12623921 | None:intergenic |
| ACTTTGCAAGTCATGTCCCG+TGG | 0.667670 | 1.1:-12623969 | MS.gene31710:CDS |
| GTGGAAACCTCAAACCCGGA+TGG | 0.668268 | 1.1:-12622888 | MS.gene31710:CDS |
| ATCTTCCGTAGGCATGACAG+TGG | 0.675961 | 1.1:+12622932 | None:intergenic |
| TCCCACTACAGTAGTAAAGG+AGG | 0.693375 | 1.1:+12625747 | None:intergenic |
| GAAGTTAAACACTCCCGTTG+AGG | 0.700871 | 1.1:-12624110 | MS.gene31710:intron |
| GAGACTCCAAATCATCTCTG+CGG | 0.717836 | 1.1:+12624351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAAGAAAAAAAAT+AGG | + | chr1.1:12623083-12623102 | None:intergenic | 10.0% |
| !! | AAGTTATATAATATTCTTAA+AGG | - | chr1.1:12623668-12623687 | MS.gene31710:intron | 10.0% |
| !! | TATAATTAGATTTATACATT+TGG | - | chr1.1:12626618-12626637 | MS.gene31710:intron | 10.0% |
| !!! | GGAATTTTTTTTTTTTTTTT+CGG | + | chr1.1:12623300-12623319 | None:intergenic | 10.0% |
| !! | AAATGATGTAATCAAATTTA+AGG | + | chr1.1:12623407-12623426 | None:intergenic | 15.0% |
| !! | ATATAGTTAAATTCAATCTT+TGG | - | chr1.1:12626110-12626129 | MS.gene31710:intron | 15.0% |
| !! | ATATATCATACGTTAAAATT+TGG | + | chr1.1:12624638-12624657 | None:intergenic | 15.0% |
| !! | TTATATAATATTCTTAAAGG+AGG | - | chr1.1:12623671-12623690 | MS.gene31710:intron | 15.0% |
| !!! | ATTACATCATTTTTATCTTT+TGG | - | chr1.1:12623415-12623434 | MS.gene31710:intron | 15.0% |
| !!! | TTACATCATTTTTATCTTTT+GGG | - | chr1.1:12623416-12623435 | MS.gene31710:intron | 15.0% |
| !!! | TTTTTACTTATGTTTAATAC+CGG | + | chr1.1:12625588-12625607 | None:intergenic | 15.0% |
| !! | AGACAAATTTAAAAACAGAA+AGG | + | chr1.1:12623997-12624016 | None:intergenic | 20.0% |
| !! | ATCACTATAATGAATTAGAA+AGG | + | chr1.1:12623774-12623793 | None:intergenic | 20.0% |
| !! | ATGAAAATTTAACCATGAAA+AGG | + | chr1.1:12626140-12626159 | None:intergenic | 20.0% |
| !! | GTTAAAATTTGGAAATATAG+AGG | + | chr1.1:12624627-12624646 | None:intergenic | 20.0% |
| !! | TAAAAATTGAAGCTTATCAA+AGG | + | chr1.1:12626081-12626100 | None:intergenic | 20.0% |
| !! | TCTATATATATCAGCAAAAA+TGG | - | chr1.1:12624579-12624598 | MS.gene31710:intron | 20.0% |
| !! | TGAAAATTGTAAAGTAATTC+CGG | + | chr1.1:12625878-12625897 | None:intergenic | 20.0% |
| !! | TGAAAATTTAACCATGAAAA+GGG | + | chr1.1:12626139-12626158 | None:intergenic | 20.0% |
| !! | TTATTGTCTTTATTGTCTTT+AGG | - | chr1.1:12625198-12625217 | MS.gene31710:CDS | 20.0% |
| !! | TTGTTGTAATAATTGTGATT+AGG | - | chr1.1:12623098-12623117 | MS.gene31710:CDS | 20.0% |
| !! | TTTCTAATTCATTATAGTGA+TGG | - | chr1.1:12623773-12623792 | MS.gene31710:intron | 20.0% |
| !!! | AAAAAGTACATGTACTTATT+TGG | - | chr1.1:12625603-12625622 | MS.gene31710:intron | 20.0% |
| !!! | CAATCATTATATTCTGAAAA+AGG | + | chr1.1:12626429-12626448 | None:intergenic | 20.0% |
| !!! | GATTGTTAATTTACATCTTT+TGG | - | chr1.1:12623537-12623556 | MS.gene31710:intron | 20.0% |
| !!! | GTTAATTTATGATCATTTTC+AGG | - | chr1.1:12622963-12622982 | MS.gene31710:intron | 20.0% |
| !!! | TAGACATATTCTTGTTTTAT+AGG | - | chr1.1:12623604-12623623 | MS.gene31710:CDS | 20.0% |
| !!! | TCATTTGGTGAAATTTATAT+TGG | - | chr1.1:12622869-12622888 | MS.gene31710:CDS | 20.0% |
| !!! | TTTTCATGGTTAAATGTATA+TGG | - | chr1.1:12626179-12626198 | MS.gene31710:intron | 20.0% |
| !!! | TTTTTCATATTTTTGCATTC+TGG | + | chr1.1:12625495-12625514 | None:intergenic | 20.0% |
| ! | AAAGAAATAAAACAGGCTTA+GGG | + | chr1.1:12624399-12624418 | None:intergenic | 25.0% |
| ! | AACAAAGGAAAAATATTGTG+AGG | + | chr1.1:12623743-12623762 | None:intergenic | 25.0% |
| ! | AATAAGCTAAACACAACTAA+TGG | - | chr1.1:12624305-12624324 | MS.gene31710:intron | 25.0% |
| ! | ACAAAGGAAAAATATTGTGA+GGG | + | chr1.1:12623742-12623761 | None:intergenic | 25.0% |
| ! | AGAAAATCTTATACCTGTAA+GGG | + | chr1.1:12624743-12624762 | None:intergenic | 25.0% |
| ! | ATAAAGTAACTCACTTGAAT+TGG | - | chr1.1:12626641-12626660 | MS.gene31710:CDS | 25.0% |
| ! | ATAGATAGCTTAATTCAAAG+TGG | + | chr1.1:12625042-12625061 | None:intergenic | 25.0% |
| ! | ATCAATGATTACCATTTGAT+CGG | + | chr1.1:12623945-12623964 | None:intergenic | 25.0% |
| ! | ATGAAATATGTTACATTCAC+AGG | - | chr1.1:12624656-12624675 | MS.gene31710:intron | 25.0% |
| ! | ATGGTAAAAGTAGAATCAAT+AGG | + | chr1.1:12625356-12625375 | None:intergenic | 25.0% |
| ! | ATGTAAAAAGAAGGAATACA+AGG | + | chr1.1:12624067-12624086 | None:intergenic | 25.0% |
| ! | ATTGTGAGTATCAAACAATT+TGG | + | chr1.1:12625914-12625933 | None:intergenic | 25.0% |
| ! | CTCAAATAAGTAAATCAAAC+AGG | - | chr1.1:12624373-12624392 | MS.gene31710:intron | 25.0% |
| ! | CTTTCATATATCAGCAAAAA+TGG | - | chr1.1:12624548-12624567 | MS.gene31710:intron | 25.0% |
| ! | GACAATAAAGACAATAAAGA+AGG | + | chr1.1:12625195-12625214 | None:intergenic | 25.0% |
| ! | TAGAAAATCTTATACCTGTA+AGG | + | chr1.1:12624744-12624763 | None:intergenic | 25.0% |
| ! | TATGAATTACAAATACTCCT+GGG | - | chr1.1:12623185-12623204 | MS.gene31710:CDS | 25.0% |
| ! | TCACTTCCTAAATTTATGTT+TGG | - | chr1.1:12625959-12625978 | MS.gene31710:intron | 25.0% |
| ! | TGTCATCAAAGAAATAAAAC+AGG | + | chr1.1:12624406-12624425 | None:intergenic | 25.0% |
| !! | ACTATTTTCACTCACAATTT+TGG | - | chr1.1:12625241-12625260 | MS.gene31710:intron | 25.0% |
| !! | ATAGAGTATTTACATTCCAA+GGG | - | chr1.1:12624436-12624455 | MS.gene31710:intron | 25.0% |
| !! | CAATATTTTCTGTATTGTGA+AGG | - | chr1.1:12626368-12626387 | MS.gene31710:intron | 25.0% |
| !! | CATTATAGTGATGGAATTTA+AGG | - | chr1.1:12623782-12623801 | MS.gene31710:intron | 25.0% |
| !! | TAATTTACATCTTTTGGTCA+CGG | - | chr1.1:12623543-12623562 | MS.gene31710:intron | 25.0% |
| !! | TTGAGCACATTAGTTTAAAA+TGG | - | chr1.1:12624106-12624125 | MS.gene31710:intron | 25.0% |
| !!! | ATGCTCAAACATTTTTTTCA+TGG | - | chr1.1:12626165-12626184 | MS.gene31710:intron | 25.0% |
| !!! | ATTGATTTTGGACTTTCAAA+AGG | - | chr1.1:12624687-12624706 | MS.gene31710:intron | 25.0% |
| !!! | GAAATTGTTGCTTTGATTTT+TGG | - | chr1.1:12623040-12623059 | MS.gene31710:intron | 25.0% |
| !!! | GTTCTTTTGTACTTTTTAAG+AGG | - | chr1.1:12625316-12625335 | MS.gene31710:intron | 25.0% |
| !!! | TTTTGTACTTTTTAAGAGGA+AGG | - | chr1.1:12625320-12625339 | MS.gene31710:intron | 25.0% |
| AAACCGGATAACTTTCTTAT+GGG | - | chr1.1:12624478-12624497 | MS.gene31710:intron | 30.0% | |
| AAACGTAAGACTTGACTATT+TGG | - | chr1.1:12625426-12625445 | MS.gene31710:intron | 30.0% | |
| AAAGGAAAAGATGCATTCAA+CGG | + | chr1.1:12623979-12623998 | None:intergenic | 30.0% | |
| ACAACGAATTTCTTGTTCTT+AGG | - | chr1.1:12625643-12625662 | MS.gene31710:intron | 30.0% | |
| ACTAAGATACACCTATTCTT+AGG | + | chr1.1:12623220-12623239 | None:intergenic | 30.0% | |
| AGAAAGGACTAAGAAAACAA+AGG | + | chr1.1:12623758-12623777 | None:intergenic | 30.0% | |
| AGAGAGAACAAAAACTTAAC+AGG | - | chr1.1:12625106-12625125 | MS.gene31710:intron | 30.0% | |
| AGCTTAATTCAAAGTGGTAA+GGG | + | chr1.1:12625036-12625055 | None:intergenic | 30.0% | |
| ATAACTTTCTTATGGGTCTT+GGG | - | chr1.1:12624485-12624504 | MS.gene31710:intron | 30.0% | |
| ATCCTGCCAAACATAAATTT+AGG | + | chr1.1:12625968-12625987 | None:intergenic | 30.0% | |
| ATTCCAAGAATGAAATGGTT+TGG | - | chr1.1:12623809-12623828 | MS.gene31710:intron | 30.0% | |
| ATTTCCCGTTTACAATTTGT+AGG | - | chr1.1:12626246-12626265 | MS.gene31710:intron | 30.0% | |
| CAAAGAAATAAAACAGGCTT+AGG | + | chr1.1:12624400-12624419 | None:intergenic | 30.0% | |
| CATTAGACTAACCTTCTTAA+TGG | + | chr1.1:12623018-12623037 | None:intergenic | 30.0% | |
| CTATGAATTACAAATACTCC+TGG | - | chr1.1:12623184-12623203 | MS.gene31710:CDS | 30.0% | |
| GCAAGTTTGATGTAAAAAGA+AGG | + | chr1.1:12624076-12624095 | None:intergenic | 30.0% | |
| TACTTATGTTTAATACCGGA+GGG | + | chr1.1:12625584-12625603 | None:intergenic | 30.0% | |
| TAGCTTAATTCAAAGTGGTA+AGG | + | chr1.1:12625037-12625056 | None:intergenic | 30.0% | |
| TATAAACCATCACATAGTTG+AGG | + | chr1.1:12623583-12623602 | None:intergenic | 30.0% | |
| TGTTTGATCTCTTCTTGATA+TGG | - | chr1.1:12624781-12624800 | MS.gene31710:intron | 30.0% | |
| TTACATCAAACTTGCATCAA+CGG | - | chr1.1:12624081-12624100 | MS.gene31710:intron | 30.0% | |
| TTACTTATGTTTAATACCGG+AGG | + | chr1.1:12625585-12625604 | None:intergenic | 30.0% | |
| TTCCTAAATTTATGTTTGGC+AGG | - | chr1.1:12625963-12625982 | MS.gene31710:CDS | 30.0% | |
| TTTGCTTGATTCATTCTTAG+TGG | - | chr1.1:12625005-12625024 | MS.gene31710:intron | 30.0% | |
| ! | AGCACATTAGTTTAAAATGG+AGG | - | chr1.1:12624109-12624128 | MS.gene31710:intron | 30.0% |
| ! | ATGCTGACTATTTATATGAC+TGG | - | chr1.1:12625991-12626010 | MS.gene31710:CDS | 30.0% |
| ! | GATAGAGTATTTACATTCCA+AGG | - | chr1.1:12624435-12624454 | MS.gene31710:intron | 30.0% |
| ! | GCACATTAGTTTAAAATGGA+GGG | - | chr1.1:12624110-12624129 | MS.gene31710:intron | 30.0% |
| ! | TATAGTGATGGAATTTAAGG+TGG | - | chr1.1:12623785-12623804 | MS.gene31710:intron | 30.0% |
| ! | TCATGTTTTCTGTATGCTAT+TGG | - | chr1.1:12624028-12624047 | MS.gene31710:intron | 30.0% |
| ! | TGACAGAAAAGCTGTTATTT+AGG | + | chr1.1:12624854-12624873 | None:intergenic | 30.0% |
| ! | TGTTAAGTTTTTGTTCTCTC+TGG | + | chr1.1:12625107-12625126 | None:intergenic | 30.0% |
| ! | TTTCGAGGATTTTCAATTTC+CGG | - | chr1.1:12625856-12625875 | MS.gene31710:intron | 30.0% |
| !! | AAAATTGGTAGTGGATCATT+TGG | - | chr1.1:12622854-12622873 | MS.gene31710:CDS | 30.0% |
| !! | CAGGTTTGTATGATTGATTT+TGG | - | chr1.1:12624675-12624694 | MS.gene31710:intron | 30.0% |
| !! | CATTAAGAAGGTTAGTCTAA+TGG | - | chr1.1:12623016-12623035 | MS.gene31710:intron | 30.0% |
| !! | GTTCTAGTTCTTGAACTTAT+GGG | - | chr1.1:12623851-12623870 | MS.gene31710:intron | 30.0% |
| !! | TATAGAGTTGGTAGGAAAAT+TGG | - | chr1.1:12622839-12622858 | MS.gene31710:CDS | 30.0% |
| !! | TGTTCTAGTTCTTGAACTTA+TGG | - | chr1.1:12623850-12623869 | MS.gene31710:intron | 30.0% |
| !! | TTCATATTTTTGCATTCTGG+TGG | + | chr1.1:12625492-12625511 | None:intergenic | 30.0% |
| !! | TTCTAGTTCTTGAACTTATG+GGG | - | chr1.1:12623852-12623871 | MS.gene31710:intron | 30.0% |
| !! | TTTATCTTTTGGGTAGTACA+TGG | - | chr1.1:12623426-12623445 | MS.gene31710:intron | 30.0% |
| !!! | CTGGACGATTTTAAAATATC+AGG | - | chr1.1:12626010-12626029 | MS.gene31710:CDS | 30.0% |
| !!! | TCGGTATAGATTTTTGGTTT+TGG | + | chr1.1:12626468-12626487 | None:intergenic | 30.0% |
| AAAAGTCCTCAACTATGTGA+TGG | - | chr1.1:12623574-12623593 | MS.gene31710:intron | 35.0% | |
| AAAGTAAGAAGCAAACTCCA+CGG | + | chr1.1:12625687-12625706 | None:intergenic | 35.0% | |
| AAGCAACATCTTATGATGCA+TGG | + | chr1.1:12625375-12625394 | None:intergenic | 35.0% | |
| AAGTGAACAATTCACGAAAC+AGG | + | chr1.1:12625766-12625785 | None:intergenic | 35.0% | |
| AATAACTTTAGCATGCAGAG+AGG | + | chr1.1:12626572-12626591 | None:intergenic | 35.0% | |
| ACACATTCTAGTCACAGTTA+CGG | - | chr1.1:12623351-12623370 | MS.gene31710:CDS | 35.0% | |
| ACAGTCATTAGAATATGCTC+TGG | + | chr1.1:12626402-12626421 | None:intergenic | 35.0% | |
| ACTACACAGAGATATCAAAC+CGG | - | chr1.1:12624462-12624481 | MS.gene31710:intron | 35.0% | |
| AGACCCATAAGAAAGTTATC+CGG | + | chr1.1:12624484-12624503 | None:intergenic | 35.0% | |
| AGCAATACTCACAAAGGAAT+TGG | - | chr1.1:12625148-12625167 | MS.gene31710:CDS | 35.0% | |
| AGTCACAGTTACGGTAATAA+TGG | - | chr1.1:12623360-12623379 | MS.gene31710:CDS | 35.0% | |
| ATGGATGAAGCTTAAAGACT+AGG | - | chr1.1:12623449-12623468 | MS.gene31710:intron | 35.0% | |
| CAAACCGGATAACTTTCTTA+TGG | - | chr1.1:12624477-12624496 | MS.gene31710:intron | 35.0% | |
| CCAAGGTATATAAAAGCAAC+AGG | + | chr1.1:12623321-12623340 | None:intergenic | 35.0% | |
| CGCTTCAAATATCCATAATC+TGG | + | chr1.1:12625743-12625762 | None:intergenic | 35.0% | |
| CGTGAATTGTTCACTTCTAA+AGG | - | chr1.1:12625770-12625789 | MS.gene31710:CDS | 35.0% | |
| GAGTGAAAATAGTTACTCAG+TGG | + | chr1.1:12625234-12625253 | None:intergenic | 35.0% | |
| GATAACTTTCTTATGGGTCT+TGG | - | chr1.1:12624484-12624503 | MS.gene31710:intron | 35.0% | |
| GTACCAAACCATTTCATTCT+TGG | + | chr1.1:12623815-12623834 | None:intergenic | 35.0% | |
| GTGGTATTCCAAGAATGAAA+TGG | - | chr1.1:12623804-12623823 | MS.gene31710:intron | 35.0% | |
| TCAGGAGATTCAACAGATAA+AGG | - | chr1.1:12626028-12626047 | MS.gene31710:intron | 35.0% | |
| TGGACTTTCAAAAGGATACA+GGG | - | chr1.1:12624695-12624714 | MS.gene31710:intron | 35.0% | |
| TGGAGCCTACAAATTGTAAA+CGG | + | chr1.1:12626254-12626273 | None:intergenic | 35.0% | |
| TTACAAATACTCCTGGGATT+AGG | - | chr1.1:12623191-12623210 | MS.gene31710:CDS | 35.0% | |
| TTGGACTTTCAAAAGGATAC+AGG | - | chr1.1:12624694-12624713 | MS.gene31710:intron | 35.0% | |
| ! | TAGCAACAGCTTGTTTAAGA+TGG | - | chr1.1:12625819-12625838 | MS.gene31710:CDS | 35.0% |
| ! | TGGGAAGTTTTCGCTAAAAT+CGG | - | chr1.1:12623907-12623926 | MS.gene31710:CDS | 35.0% |
| !! | ATGAAATGGTTTGGTACTGA+TGG | - | chr1.1:12623818-12623837 | MS.gene31710:intron | 35.0% |
| !! | GCAATTTACATGTTGTTTCG+AGG | - | chr1.1:12625841-12625860 | MS.gene31710:intron | 35.0% |
| !! | GCTAAAATCGGTTTTGATGT+TGG | - | chr1.1:12623919-12623938 | MS.gene31710:CDS | 35.0% |
| !! | GGTAATCATTGATTCGTCTA+TGG | - | chr1.1:12623952-12623971 | MS.gene31710:CDS | 35.0% |
| !! | TTTTGCATTTTAGCCTTCCT+TGG | - | chr1.1:12625450-12625469 | MS.gene31710:intron | 35.0% |
| !!! | CCTGTTGCTTTTATATACCT+TGG | - | chr1.1:12623318-12623337 | MS.gene31710:intron | 35.0% |
| AAGCTATCTGAGAGAGCTTA+TGG | - | chr1.1:12624281-12624300 | MS.gene31710:intron | 40.0% | |
| AAGTAAGAAGCAAACTCCAC+GGG | + | chr1.1:12625686-12625705 | None:intergenic | 40.0% | |
| ACAACCACAGCTACTATATG+AGG | - | chr1.1:12623643-12623662 | MS.gene31710:CDS | 40.0% | |
| ACATGATACGCATACCTCAA+CGG | + | chr1.1:12625543-12625562 | None:intergenic | 40.0% | |
| ACCTCCTTTACTACTGTAGT+GGG | - | chr1.1:12623888-12623907 | MS.gene31710:CDS | 40.0% | |
| ACGTGTTTGTATGAAGCTCA+GGG | - | chr1.1:12626494-12626513 | MS.gene31710:intron | 40.0% | |
| ACTTCCCACTACAGTAGTAA+AGG | + | chr1.1:12623895-12623914 | None:intergenic | 40.0% | |
| ATCTCTGTGTAGTAATCCCT+TGG | + | chr1.1:12624455-12624474 | None:intergenic | 40.0% | |
| CTCTCTGGATGAGTTTATCA+AGG | + | chr1.1:12625092-12625111 | None:intergenic | 40.0% | |
| GCAAGTAGCAATACTCACAA+AGG | - | chr1.1:12625142-12625161 | MS.gene31710:CDS | 40.0% | |
| GGAGCCTACAAATTGTAAAC+GGG | + | chr1.1:12626253-12626272 | None:intergenic | 40.0% | |
| GGATTAGGCATCCTAAGAAT+AGG | - | chr1.1:12623206-12623225 | MS.gene31710:intron | 40.0% | |
| GGGATATGCTTGTAACTGAT+AGG | + | chr1.1:12624723-12624742 | None:intergenic | 40.0% | |
| GTTACAAGCATATCCCTTAC+AGG | - | chr1.1:12624727-12624746 | MS.gene31710:intron | 40.0% | |
| TCCAAAACCAGAAACGATTG+TGG | - | chr1.1:12626729-12626748 | MS.gene31710:intron | 40.0% | |
| TCTTGGGAAGAAAGCAAATC+AGG | - | chr1.1:12624501-12624520 | MS.gene31710:CDS | 40.0% | |
| TTCGATCAACGACCAGATTA+TGG | - | chr1.1:12625728-12625747 | MS.gene31710:CDS | 40.0% | |
| TTTGATGTTGGCCGATCAAA+TGG | - | chr1.1:12623931-12623950 | MS.gene31710:CDS | 40.0% | |
| TTTGCCTCATATAGTAGCTG+TGG | + | chr1.1:12623650-12623669 | None:intergenic | 40.0% | |
| ! | AGAGATGATTTGGAGTCTCT+TGG | - | chr1.1:12625289-12625308 | MS.gene31710:intron | 40.0% |
| ! | ATCTTTGGTCACCCTTTTCA+TGG | - | chr1.1:12626125-12626144 | MS.gene31710:intron | 40.0% |
| ! | GAGGAAAGTATAGAGTTGGT+AGG | - | chr1.1:12622831-12622850 | MS.gene31710:CDS | 40.0% |
| ! | GGACGTTCGGTATAGATTTT+TGG | + | chr1.1:12626474-12626493 | None:intergenic | 40.0% |
| ! | GTTGGAGGAAAGTATAGAGT+TGG | - | chr1.1:12622827-12622846 | MS.gene31710:CDS | 40.0% |
| ! | GTTGGTAGGAAAATTGGTAG+TGG | - | chr1.1:12622845-12622864 | MS.gene31710:CDS | 40.0% |
| ! | TTCTTTGATGACAGCTTACG+AGG | - | chr1.1:12624413-12624432 | MS.gene31710:intron | 40.0% |
| !! | AATGTGTTCGAGAGTATCCA+AGG | + | chr1.1:12623338-12623357 | None:intergenic | 40.0% |
| !! | TCTTTTGGGTAGTACATGGA+TGG | - | chr1.1:12623430-12623449 | MS.gene31710:intron | 40.0% |
| !!! | TCCACAATCGTTTCTGGTTT+TGG | + | chr1.1:12626733-12626752 | None:intergenic | 40.0% |
| ATGTGGTGCTTCTGATGACT+TGG | - | chr1.1:12626786-12626805 | MS.gene31710:CDS | 45.0% | |
| CACGTGTTTGTATGAAGCTC+AGG | - | chr1.1:12626493-12626512 | MS.gene31710:intron | 45.0% | |
| CATACAAACACGTGGACGTT+CGG | + | chr1.1:12626487-12626506 | None:intergenic | 45.0% | |
| CATGATACGCATACCTCAAC+GGG | + | chr1.1:12625542-12625561 | None:intergenic | 45.0% | |
| CTGAGCTTCATACAAACACG+TGG | + | chr1.1:12626495-12626514 | None:intergenic | 45.0% | |
| GAAGTTAAACACTCCCGTTG+AGG | - | chr1.1:12625526-12625545 | MS.gene31710:intron | 45.0% | |
| GACCTCCTTTACTACTGTAG+TGG | - | chr1.1:12623887-12623906 | MS.gene31710:CDS | 45.0% | |
| GAGACTCCAAATCATCTCTG+CGG | + | chr1.1:12625288-12625307 | None:intergenic | 45.0% | |
| GAGGTTTCCACAATCGTTTC+TGG | + | chr1.1:12626739-12626758 | None:intergenic | 45.0% | |
| GATTGTGGAAACCTCAAACC+CGG | - | chr1.1:12626744-12626763 | MS.gene31710:intron | 45.0% | |
| GTTGATCGAATGTCAAGGAG+TGG | + | chr1.1:12625718-12625737 | None:intergenic | 45.0% | |
| GTTGTCAGACATGTGTTGCA+CGG | + | chr1.1:12623264-12623283 | None:intergenic | 45.0% | |
| TCCCACTACAGTAGTAAAGG+AGG | + | chr1.1:12623892-12623911 | None:intergenic | 45.0% | |
| TGAGCTTGTGGCCATTAAGA+AGG | - | chr1.1:12623004-12623023 | MS.gene31710:intron | 45.0% | |
| TGGTCGTTGATCGAATGTCA+AGG | + | chr1.1:12625723-12625742 | None:intergenic | 45.0% | |
| TGGTTCAATACTGGTAGGCA+CGG | + | chr1.1:12626281-12626300 | None:intergenic | 45.0% | |
| TGTTGTGACTTCTGAGCTTG+TGG | - | chr1.1:12622992-12623011 | MS.gene31710:intron | 45.0% | |
| TGTTTCCACTGTCATGCCTA+CGG | - | chr1.1:12626699-12626718 | MS.gene31710:intron | 45.0% | |
| TTCTTAGGATGCCTAATCCC+AGG | + | chr1.1:12623205-12623224 | None:intergenic | 45.0% | |
| ! | CACATCCTCTGGTTCAATAC+TGG | + | chr1.1:12626290-12626309 | None:intergenic | 45.0% |
| ! | CAGTATTGAACCAGAGGATG+TGG | - | chr1.1:12626288-12626307 | MS.gene31710:intron | 45.0% |
| ! | TCCTCTGGTTCAATACTGGT+AGG | + | chr1.1:12626286-12626305 | None:intergenic | 45.0% |
| !! | CATTTTAGCCTTCCTTGGCA+AGG | - | chr1.1:12625455-12625474 | MS.gene31710:intron | 45.0% |
| !!! | GGTTTTGGAACATCTTCCGT+AGG | + | chr1.1:12626718-12626737 | None:intergenic | 45.0% |
| !! | TATAAATCTAATTATAATAT+CGG | + | chr1.1:12626614-12626633 | None:intergenic | 5.0% |
| ACTTTGCAAGTCATGTCCCG+TGG | - | chr1.1:12625667-12625686 | MS.gene31710:intron | 50.0% | |
| ATCTTCCGTAGGCATGACAG+TGG | + | chr1.1:12626707-12626726 | None:intergenic | 50.0% | |
| GAGGATGTGGATGAGCATAC+AGG | - | chr1.1:12626301-12626320 | MS.gene31710:intron | 50.0% | |
| GCAAAGCCGCAGAGATGATT+TGG | - | chr1.1:12625279-12625298 | MS.gene31710:intron | 50.0% | |
| GGTGTGTTGGGGAGTAAATG+TGG | - | chr1.1:12626769-12626788 | MS.gene31710:CDS | 50.0% | |
| GTAGGCATGACAGTGGAAAC+AGG | + | chr1.1:12626700-12626719 | None:intergenic | 50.0% | |
| GTATGCTCATCCACATCCTC+TGG | + | chr1.1:12626301-12626320 | None:intergenic | 50.0% | |
| TAAAGGAGGTCGTCGAGACT+CGG | + | chr1.1:12623878-12623897 | None:intergenic | 50.0% | |
| TCAAACCCGGATGGTGTGTT+GGG | - | chr1.1:12626757-12626776 | MS.gene31710:intron | 50.0% | |
| TTACTCCCCAACACACCATC+CGG | + | chr1.1:12626766-12626785 | None:intergenic | 50.0% | |
| TTGCGACTCTCAACAGTGCA+GGG | - | chr1.1:12625393-12625412 | MS.gene31710:intron | 50.0% | |
| ! | GCCTACCAGTATTGAACCAG+AGG | - | chr1.1:12626282-12626301 | MS.gene31710:intron | 50.0% |
| ATACTGGTAGGCACGGCAAC+TGG | + | chr1.1:12626274-12626293 | None:intergenic | 55.0% | |
| CAAACCCGGATGGTGTGTTG+GGG | - | chr1.1:12626758-12626777 | MS.gene31710:intron | 55.0% | |
| CAACACACCATCCGGGTTTG+AGG | + | chr1.1:12626758-12626777 | None:intergenic | 55.0% | |
| CTCAAACCCGGATGGTGTGT+TGG | - | chr1.1:12626756-12626775 | MS.gene31710:intron | 55.0% | |
| CTTGCAGACCTTGCCAAGGA+AGG | + | chr1.1:12625466-12625485 | None:intergenic | 55.0% | |
| CTTGCGACTCTCAACAGTGC+AGG | - | chr1.1:12625392-12625411 | MS.gene31710:intron | 55.0% | |
| GTGGAAACCTCAAACCCGGA+TGG | - | chr1.1:12626748-12626767 | MS.gene31710:intron | 55.0% | |
| TACTCCCCAACACACCATCC+GGG | + | chr1.1:12626765-12626784 | None:intergenic | 55.0% | |
| CCCTTGCTACGTACTCCCTC+CGG | - | chr1.1:12625566-12625585 | MS.gene31710:intron | 60.0% | |
| GCAGCTTGCAGACCTTGCCA+AGG | + | chr1.1:12625470-12625489 | None:intergenic | 60.0% | |
| ! | ACCGGAGGGAGTACGTAGCA+AGG | + | chr1.1:12625570-12625589 | None:intergenic | 60.0% |
| ! | CCGGAGGGAGTACGTAGCAA+GGG | + | chr1.1:12625569-12625588 | None:intergenic | 60.0% |
| ! | CGGAGGGAGTACGTAGCAAG+GGG | + | chr1.1:12625568-12625587 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 12622815 | 12626843 | 12622815 | ID=MS.gene31710 |
| chr1.1 | mRNA | 12622815 | 12626843 | 12622815 | ID=MS.gene31710.t1;Parent=MS.gene31710 |
| chr1.1 | exon | 12626768 | 12626843 | 12626768 | ID=MS.gene31710.t1.exon1;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12626768 | 12626843 | 12626768 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12626633 | 12626673 | 12626633 | ID=MS.gene31710.t1.exon2;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12626633 | 12626673 | 12626633 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12625963 | 12626032 | 12625963 | ID=MS.gene31710.t1.exon3;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12625963 | 12626032 | 12625963 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12625706 | 12625854 | 12625706 | ID=MS.gene31710.t1.exon4;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12625706 | 12625854 | 12625706 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12625136 | 12625231 | 12625136 | ID=MS.gene31710.t1.exon5;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12625136 | 12625231 | 12625136 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12624910 | 12624980 | 12624910 | ID=MS.gene31710.t1.exon6;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12624910 | 12624980 | 12624910 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12624489 | 12624550 | 12624489 | ID=MS.gene31710.t1.exon7;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12624489 | 12624550 | 12624489 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12624317 | 12624380 | 12624317 | ID=MS.gene31710.t1.exon8;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12624317 | 12624380 | 12624317 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12624111 | 12624195 | 12624111 | ID=MS.gene31710.t1.exon9;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12624111 | 12624195 | 12624111 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12623867 | 12623993 | 12623867 | ID=MS.gene31710.t1.exon10;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12623867 | 12623993 | 12623867 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12623591 | 12623673 | 12623591 | ID=MS.gene31710.t1.exon11;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12623591 | 12623673 | 12623591 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12623336 | 12623390 | 12623336 | ID=MS.gene31710.t1.exon12;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12623336 | 12623390 | 12623336 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12623095 | 12623222 | 12623095 | ID=MS.gene31710.t1.exon13;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12623095 | 12623222 | 12623095 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| chr1.1 | exon | 12622815 | 12622979 | 12622815 | ID=MS.gene31710.t1.exon14;Parent=MS.gene31710.t1 |
| chr1.1 | CDS | 12622815 | 12622979 | 12622815 | ID=cds.MS.gene31710.t1;Parent=MS.gene31710.t1 |
| Gene Sequence |
| Protein sequence |
