Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050379.t1 | AES94086.2 | 100 | 270 | 0 | 0 | 1 | 270 | 33 | 302 | 4.50E-145 | 523.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050379.t1 | Q54KJ8 | 25.6 | 223 | 150 | 6 | 10 | 218 | 6 | 226 | 3.0e-12 | 73.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050379.t1 | G7KDE9 | 100.0 | 270 | 0 | 0 | 1 | 270 | 1 | 270 | 3.3e-145 | 523.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene050379 | 0.856008 | 4.30E-62 | -1.69E-46 |
| MS.gene050379 | MS.gene051959 | 0.807415 | 5.11E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene051960 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene052053 | 0.800174 | 1.63E-48 | -1.69E-46 |
| MS.gene050379 | MS.gene056530 | 0.818172 | 2.25E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene057148 | -0.821548 | 3.81E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene057174 | 0.815973 | 7.02E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene057472 | 0.814443 | 1.54E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene059436 | 0.808934 | 2.43E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene060522 | 0.825113 | 5.59E-54 | -1.69E-46 |
| MS.gene050379 | MS.gene061384 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene062288 | 0.81978 | 9.70E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene06299 | 0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene06439 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene065021 | 0.858186 | 9.79E-63 | -1.69E-46 |
| MS.gene050379 | MS.gene065509 | 0.841996 | 3.38E-58 | -1.69E-46 |
| MS.gene050379 | MS.gene065510 | 0.820871 | 5.45E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene066879 | 0.802715 | 4.92E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene067785 | 0.857168 | 1.96E-62 | -1.69E-46 |
| MS.gene050379 | MS.gene068941 | 0.816759 | 4.69E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene071949 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene07212 | 0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene072804 | 0.989164 | 5.86E-177 | -1.69E-46 |
| MS.gene050379 | MS.gene073556 | 0.858397 | 8.47E-63 | -1.69E-46 |
| MS.gene050379 | MS.gene073557 | 0.813674 | 2.27E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene07361 | 0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene050379 | MS.gene07362 | 0.823462 | 1.37E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene074124 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene08120 | 0.805492 | 1.30E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene09926 | 0.811096 | 8.31E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene09927 | 0.816209 | 6.22E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene20905 | 0.809217 | 2.11E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene21237 | 0.826742 | 2.30E-54 | -1.69E-46 |
| MS.gene050379 | MS.gene21770 | 0.81383 | 2.10E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene21853 | 0.808201 | 3.48E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene24408 | 0.838417 | 2.91E-57 | -1.69E-46 |
| MS.gene050379 | MS.gene31072 | 0.813318 | 2.72E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene31710 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene32718 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene34076 | 0.817691 | 2.89E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene39037 | 0.804692 | 1.91E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene39528 | 0.839732 | 1.33E-57 | -1.69E-46 |
| MS.gene050379 | MS.gene39698 | 0.816282 | 5.99E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene39699 | 0.829123 | 6.14E-55 | -1.69E-46 |
| MS.gene050379 | MS.gene39700 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene39743 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene41626 | 0.861893 | 7.45E-64 | -1.69E-46 |
| MS.gene050379 | MS.gene41704 | 0.853563 | 2.20E-61 | -1.69E-46 |
| MS.gene050379 | MS.gene42218 | 0.828984 | 6.63E-55 | -1.69E-46 |
| MS.gene050379 | MS.gene42516 | 0.80845 | 3.08E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene44909 | 0.809582 | 1.76E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene45552 | 0.809273 | 2.05E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene46055 | 0.82171 | 3.49E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene49262 | 0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene51233 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene050379 | MS.gene51894 | 0.853873 | 1.79E-61 | -1.69E-46 |
| MS.gene050379 | MS.gene51935 | 0.854426 | 1.24E-61 | -1.69E-46 |
| MS.gene050379 | MS.gene58022 | 0.821031 | 5.01E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene60368 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene62936 | 0.817216 | 3.70E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene63905 | 0.80626 | 8.97E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene66171 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene67131 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene050379 | MS.gene67236 | 0.801491 | 8.78E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene68298 | 0.800554 | 1.37E-48 | -1.69E-46 |
| MS.gene050379 | MS.gene68617 | 0.825531 | 4.46E-54 | -1.69E-46 |
| MS.gene050379 | MS.gene69734 | -0.803008 | 4.28E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene71488 | 0.812687 | 3.74E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene71722 | 0.817123 | 3.88E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene73393 | 0.8425 | 2.49E-58 | -1.69E-46 |
| MS.gene050379 | MS.gene73478 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene73644 | 0.829441 | 5.14E-55 | -1.69E-46 |
| MS.gene050379 | MS.gene74337 | 0.821521 | 3.86E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene74502 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene74935 | 0.816297 | 5.95E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene76159 | 0.807678 | 4.49E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene77666 | 0.830894 | 2.27E-55 | -1.69E-46 |
| MS.gene050379 | MS.gene78366 | 0.81208 | 5.07E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene78383 | 0.806612 | 7.56E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene80167 | 0.837681 | 4.50E-57 | -1.69E-46 |
| MS.gene050379 | MS.gene84733 | 0.8123 | 4.55E-51 | -1.69E-46 |
| MS.gene050379 | MS.gene84734 | 0.817336 | 3.48E-52 | -1.69E-46 |
| MS.gene050379 | MS.gene84866 | 0.807412 | 5.12E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene84967 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene050379 | MS.gene89256 | 0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene050379 | MS.gene92076 | 0.834706 | 2.57E-56 | -1.69E-46 |
| MS.gene050379 | MS.gene93163 | 0.80661 | 7.57E-50 | -1.69E-46 |
| MS.gene050379 | MS.gene94266 | 0.823317 | 1.48E-53 | -1.69E-46 |
| MS.gene050379 | MS.gene95833 | 0.80411 | 2.53E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene98636 | 0.845482 | 3.95E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76728 | MS.gene050379 | PPI |
| MS.gene050379 | MS.gene42075 | PPI |
| MS.gene050379 | MS.gene82237 | PPI |
| MS.gene050379 | MS.gene77045 | PPI |
| MS.gene050379 | MS.gene48819 | PPI |
| MS.gene87743 | MS.gene050379 | PPI |
| MS.gene87064 | MS.gene050379 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050379.t1 | MTR_5g010620 | 100.000 | 270 | 0 | 0 | 1 | 270 | 33 | 302 | 0.0 | 556 |
| MS.gene050379.t1 | MTR_5g010620 | 100.000 | 270 | 0 | 0 | 1 | 270 | 1 | 270 | 0.0 | 555 |
| MS.gene050379.t1 | MTR_8g096950 | 75.445 | 281 | 55 | 2 | 1 | 267 | 1 | 281 | 5.76e-154 | 430 |
| MS.gene050379.t1 | MTR_7g055620 | 49.558 | 113 | 31 | 4 | 6 | 118 | 171 | 257 | 2.15e-19 | 87.0 |
| MS.gene050379.t1 | MTR_0411s0050 | 59.649 | 57 | 23 | 0 | 75 | 131 | 15 | 71 | 2.86e-19 | 80.5 |
| MS.gene050379.t1 | MTR_3g110015 | 60.000 | 80 | 18 | 2 | 6 | 71 | 6 | 85 | 3.20e-19 | 80.5 |
| MS.gene050379.t1 | MTR_3g109978 | 60.000 | 80 | 18 | 2 | 6 | 71 | 97 | 176 | 3.50e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050379.t1 | AT4G20330 | 64.912 | 285 | 82 | 4 | 1 | 270 | 1 | 282 | 9.51e-122 | 349 |
| MS.gene050379.t1 | AT4G21010 | 55.036 | 278 | 110 | 6 | 1 | 266 | 1 | 275 | 1.21e-93 | 277 |
Find 52 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGCTGTTATTGACTTAA+AGG | 0.158931 | 5.2:-3734471 | MS.gene050379:CDS |
| CTTCTGGAAATTTGCGTATC+AGG | 0.239866 | 5.2:+3734495 | None:intergenic |
| TCTCCATCGTATCTTACTTT+TGG | 0.252078 | 5.2:+3734697 | None:intergenic |
| AACTGTAATGGAGGACTTAC+AGG | 0.272992 | 5.2:-3734438 | MS.gene050379:intron |
| ATGGGCACTTTAGGATCATT+AGG | 0.284072 | 5.2:+3733241 | None:intergenic |
| TCAATAACAGCAATGCCTTC+TGG | 0.315673 | 5.2:+3734479 | None:intergenic |
| AGGTCATCATCCACCTTAAT+GGG | 0.315953 | 5.2:+3733223 | None:intergenic |
| TGAAAGGTGGCAGGGAGATT+TGG | 0.323843 | 5.2:-3733303 | MS.gene050379:CDS |
| TAGGTCATCATCCACCTTAA+TGG | 0.327997 | 5.2:+3733222 | None:intergenic |
| TCCACCTTAATGGGCACTTT+AGG | 0.329618 | 5.2:+3733232 | None:intergenic |
| TGATCCTAAAGTGCCCATTA+AGG | 0.368344 | 5.2:-3733236 | MS.gene050379:CDS |
| TTGACCGGAGCAAGAGCATT+TGG | 0.376765 | 5.2:+3736143 | None:intergenic |
| CTCTTTGCAGTGTTAGTAGC+AGG | 0.378308 | 5.2:+3733121 | None:intergenic |
| CGCTTCATTTGAGCTCCAAC+AGG | 0.397843 | 5.2:+3736068 | None:intergenic |
| GCTGACTAATGCCCATCTTC+CGG | 0.401133 | 5.2:-3733017 | MS.gene050379:CDS |
| ATAGTCGAAACATGCTCTTC+GGG | 0.403328 | 5.2:-3734537 | MS.gene050379:intron |
| GAGGAGGAGTGCAGCACAAA+TGG | 0.404625 | 5.2:-3733101 | MS.gene050379:CDS |
| GACTCGGCAGGCTTTAACAT+TGG | 0.404721 | 5.2:-3734791 | MS.gene050379:CDS |
| ATTAGTCAGCTTGGTCCTCT+TGG | 0.410191 | 5.2:+3733030 | None:intergenic |
| TATAGTCGAAACATGCTCTT+CGG | 0.434439 | 5.2:-3734538 | MS.gene050379:intron |
| TGGGCACTTTAGGATCATTA+GGG | 0.444208 | 5.2:+3733242 | None:intergenic |
| TATAGGCTTTGAAAGGTGGC+AGG | 0.480454 | 5.2:-3733312 | MS.gene050379:intron |
| GCTGTCCAACTTTGATTCAC+AGG | 0.485843 | 5.2:-3733278 | MS.gene050379:CDS |
| GTCTTCCTGTGAATCAAAGT+TGG | 0.504653 | 5.2:+3733273 | None:intergenic |
| GAAATTCAGATGGCGTTACA+AGG | 0.505735 | 5.2:-3736254 | None:intergenic |
| GGATTCATACCCAACTGTAA+TGG | 0.506042 | 5.2:-3734450 | MS.gene050379:CDS |
| TTCAGTTTATAGGCTTTGAA+AGG | 0.517712 | 5.2:-3733319 | MS.gene050379:intron |
| TGTGCCAAATGCTCTTGCTC+CGG | 0.535916 | 5.2:-3736147 | MS.gene050379:CDS |
| TGTAAGTCCTCCATTACAGT+TGG | 0.544872 | 5.2:+3734440 | None:intergenic |
| ATGTTGAAGTCTCTCTGTAT+CGG | 0.571558 | 5.2:+3736112 | None:intergenic |
| GTGATATGATTGATATAGAG+AGG | 0.575017 | 5.2:-3733168 | MS.gene050379:CDS |
| AGTATTCGTAAAGCTCCTGT+TGG | 0.575171 | 5.2:-3736083 | MS.gene050379:CDS |
| AAGATGGGCATTAGTCAGCT+TGG | 0.579562 | 5.2:+3733021 | None:intergenic |
| CTGATACGCAAATTTCCAGA+AGG | 0.581325 | 5.2:-3734494 | MS.gene050379:CDS |
| ATCGAGCATAGCAGCAAACA+AGG | 0.582292 | 5.2:-3736183 | MS.gene050379:CDS |
| AGTTTATAGGCTTTGAAAGG+TGG | 0.583829 | 5.2:-3733316 | MS.gene050379:intron |
| TCCTAAAGTGCCCATTAAGG+TGG | 0.592622 | 5.2:-3733233 | MS.gene050379:CDS |
| TGGAGAAAGATTCTCTTACA+AGG | 0.595910 | 5.2:-3734680 | MS.gene050379:intron |
| AATCCAAAAGTAAGATACGA+TGG | 0.596900 | 5.2:-3734700 | MS.gene050379:CDS |
| TGTTAGCTTTCATGTCCACA+TGG | 0.600643 | 5.2:+3734749 | None:intergenic |
| GTAAGTCCTCCATTACAGTT+GGG | 0.602392 | 5.2:+3734441 | None:intergenic |
| AGGAGTGCAGCACAAATGGA+AGG | 0.606142 | 5.2:-3733097 | MS.gene050379:CDS |
| GTATCGGTCGAAAATTTGAC+CGG | 0.607296 | 5.2:+3736128 | None:intergenic |
| CACTTTAGGATCATTAGGGT+AGG | 0.617730 | 5.2:+3733246 | None:intergenic |
| TTCATACCCAACTGTAATGG+AGG | 0.622275 | 5.2:-3734447 | MS.gene050379:CDS |
| TGATATGATTGATATAGAGA+GGG | 0.634684 | 5.2:-3733167 | MS.gene050379:CDS |
| ATAGGCTTTGAAAGGTGGCA+GGG | 0.637475 | 5.2:-3733311 | MS.gene050379:intron |
| CTACTAACACTGCAAAGAGG+AGG | 0.649367 | 5.2:-3733117 | MS.gene050379:CDS |
| AATAAATGAAACATGCCATG+TGG | 0.663478 | 5.2:-3734764 | MS.gene050379:CDS |
| AGAAGAATGAAATCACCAAG+AGG | 0.680362 | 5.2:-3733045 | MS.gene050379:CDS |
| CTGCTACTAACACTGCAAAG+AGG | 0.683295 | 5.2:-3733120 | MS.gene050379:CDS |
| TCTATATCAATCATATCACG+AGG | 0.737039 | 5.2:+3733172 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATAATATTTAAT+TGG | - | chr5.2:3733986-3734005 | MS.gene050379:intron | 0.0% |
| !! | ATTAAATATTATTAATTTAT+TGG | + | chr5.2:3733986-3734005 | None:intergenic | 0.0% |
| !! | TTAAATATTATTAATTTATT+GGG | + | chr5.2:3733985-3734004 | None:intergenic | 0.0% |
| !! | ATTTATATTTGTTTAGTTAT+AGG | + | chr5.2:3735449-3735468 | None:intergenic | 10.0% |
| !! | TAAAATATAATAGACAAATA+TGG | - | chr5.2:3735091-3735110 | MS.gene050379:intron | 10.0% |
| !! | TTCTAATAATATTTATAAGA+TGG | + | chr5.2:3734133-3734152 | None:intergenic | 10.0% |
| !! | TTTATATTTGTTTAGTTATA+GGG | + | chr5.2:3735448-3735467 | None:intergenic | 10.0% |
| !!! | GTTATAATAAAAAGTATTAA+TGG | - | chr5.2:3734069-3734088 | MS.gene050379:intron | 10.0% |
| !!! | TTAATACTTTTTATTATAAC+CGG | + | chr5.2:3734069-3734088 | None:intergenic | 10.0% |
| !! | AACTTATATTTATATTGTTG+TGG | + | chr5.2:3735152-3735171 | None:intergenic | 15.0% |
| !! | ATAAAAATAATATCAACTTG+TGG | + | chr5.2:3733248-3733267 | None:intergenic | 15.0% |
| !! | TAAAAATAATATCAACTTGT+GGG | + | chr5.2:3733247-3733266 | None:intergenic | 15.0% |
| !! | TCAAAATTTAGGTATATAAT+TGG | - | chr5.2:3735861-3735880 | MS.gene050379:intron | 15.0% |
| !! | TTTATGATTATGAATACTTT+GGG | - | chr5.2:3733263-3733282 | MS.gene050379:CDS | 15.0% |
| !!! | TAATACTTTTTATTATAACC+GGG | + | chr5.2:3734068-3734087 | None:intergenic | 15.0% |
| !!! | TTATTGGTTAATATTTATGT+TGG | + | chr5.2:3735662-3735681 | None:intergenic | 15.0% |
| !!! | TTTTATGATTATGAATACTT+TGG | - | chr5.2:3733262-3733281 | MS.gene050379:CDS | 15.0% |
| !! | AAATAGTAGTATAAAAGAAG+AGG | + | chr5.2:3734644-3734663 | None:intergenic | 20.0% |
| !! | AGTCTATACTTATATATTGA+TGG | - | chr5.2:3735386-3735405 | MS.gene050379:intron | 20.0% |
| !! | ATAATATTTATAAGATGGCA+TGG | + | chr5.2:3734128-3734147 | None:intergenic | 20.0% |
| !! | ATTTAATTGGACTAATTTGA+TGG | - | chr5.2:3733999-3734018 | MS.gene050379:intron | 20.0% |
| !! | TAATATTTATAAGATGGCAT+GGG | + | chr5.2:3734127-3734146 | None:intergenic | 20.0% |
| !! | TATCAAAAACCTAGATATTA+AGG | - | chr5.2:3733464-3733483 | MS.gene050379:intron | 20.0% |
| !! | TTGTATGTGATGTATAAATA+TGG | - | chr5.2:3734254-3734273 | MS.gene050379:intron | 20.0% |
| !!! | ATTTCATTCTTCTTTTTCTT+AGG | + | chr5.2:3736181-3736200 | None:intergenic | 20.0% |
| !!! | CTTCTTTTATACTACTATTT+TGG | - | chr5.2:3734644-3734663 | MS.gene050379:intron | 20.0% |
| !!! | TTGTATTTTCTTAATAGACT+CGG | - | chr5.2:3734426-3734445 | MS.gene050379:intron | 20.0% |
| ! | AAAAAGCCTAAGTTGTATAT+AGG | - | chr5.2:3733604-3733623 | MS.gene050379:intron | 25.0% |
| ! | AAAACAATCACAGTTAAAAG+TGG | - | chr5.2:3733339-3733358 | MS.gene050379:intron | 25.0% |
| ! | AAGCACTAAGTAAGTATATA+TGG | + | chr5.2:3734402-3734421 | None:intergenic | 25.0% |
| ! | ACTATTTAAGCTTCTTTCAT+AGG | + | chr5.2:3735030-3735049 | None:intergenic | 25.0% |
| ! | ATATTTGGGAATAATAAGCT+GGG | + | chr5.2:3735288-3735307 | None:intergenic | 25.0% |
| ! | ATGGATAAGCAACTTAATTA+TGG | - | chr5.2:3733633-3733652 | MS.gene050379:intron | 25.0% |
| ! | ATTAGGAACAAAATAGCTTA+TGG | + | chr5.2:3734294-3734313 | None:intergenic | 25.0% |
| ! | CTGAAATTGTAATTACGTTA+TGG | - | chr5.2:3733426-3733445 | MS.gene050379:intron | 25.0% |
| ! | GATACCATATTGAAGTTATA+GGG | + | chr5.2:3735222-3735241 | None:intergenic | 25.0% |
| ! | GGTAAATTAGATTTAGTAGT+TGG | - | chr5.2:3734816-3734835 | MS.gene050379:intron | 25.0% |
| ! | TAAATAGTCAACACAATTGA+TGG | - | chr5.2:3735042-3735061 | MS.gene050379:intron | 25.0% |
| ! | TATATTTGGGAATAATAAGC+TGG | + | chr5.2:3735289-3735308 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCTATCTAAAG+AGG | - | chr5.2:3733881-3733900 | MS.gene050379:intron | 25.0% |
| ! | TCATAAAGCTTTCAGTTTAT+AGG | - | chr5.2:3735904-3735923 | MS.gene050379:intron | 25.0% |
| ! | TGATATGATTGATATAGAGA+GGG | - | chr5.2:3736066-3736085 | MS.gene050379:CDS | 25.0% |
| ! | TTGTATAAAGTATAACCCAA+GGG | + | chr5.2:3734184-3734203 | None:intergenic | 25.0% |
| !! | GGTAATTCTTTTATATGCAT+GGG | + | chr5.2:3735427-3735446 | None:intergenic | 25.0% |
| !! | GTAATTCTTTTATATGCATG+GGG | + | chr5.2:3735426-3735445 | None:intergenic | 25.0% |
| !! | TTCTTCTTTTTCTTAGGTTT+AGG | + | chr5.2:3736175-3736194 | None:intergenic | 25.0% |
| !! | TTTTATTATAACCGGGTTAA+TGG | + | chr5.2:3734061-3734080 | None:intergenic | 25.0% |
| !!! | AAGATGTTTTTGACAATATG+AGG | - | chr5.2:3734507-3734526 | MS.gene050379:CDS | 25.0% |
| !!! | ATAAGCTATTTTGTTCCTAA+TGG | - | chr5.2:3734293-3734312 | MS.gene050379:intron | 25.0% |
| !!! | CATTCATTTTTCTGAAACAT+TGG | - | chr5.2:3734856-3734875 | MS.gene050379:intron | 25.0% |
| !!! | CTGTTTTAGCATGTTTTTAT+TGG | - | chr5.2:3735753-3735772 | MS.gene050379:intron | 25.0% |
| !!! | CTTATTTTCATAAACTCTTC+TGG | + | chr5.2:3733776-3733795 | None:intergenic | 25.0% |
| !!! | TATACAACTTAGGCTTTTTT+TGG | + | chr5.2:3733603-3733622 | None:intergenic | 25.0% |
| AAATTCATCGTACACATGAA+AGG | + | chr5.2:3734965-3734984 | None:intergenic | 30.0% | |
| AAGTACTAGTGAAACTGTTT+GGG | + | chr5.2:3733845-3733864 | None:intergenic | 30.0% | |
| AATAAATGAAACATGCCATG+TGG | - | chr5.2:3734469-3734488 | MS.gene050379:CDS | 30.0% | |
| AATAAGCTGAAAACACCTTA+TGG | - | chr5.2:3733790-3733809 | MS.gene050379:intron | 30.0% | |
| AATCCAAAAGTAAGATACGA+TGG | - | chr5.2:3734533-3734552 | MS.gene050379:CDS | 30.0% | |
| AGAAGAAACAATCTCAGTAT+AGG | + | chr5.2:3733961-3733980 | None:intergenic | 30.0% | |
| ATAGTTGCTCAATAAGATCA+AGG | + | chr5.2:3734921-3734940 | None:intergenic | 30.0% | |
| ATATGCATAAGATGTTGCAA+GGG | - | chr5.2:3735067-3735086 | MS.gene050379:intron | 30.0% | |
| ATTGTCTATAGGATAAGTCA+GGG | + | chr5.2:3735318-3735337 | None:intergenic | 30.0% | |
| CGATACCATATTGAAGTTAT+AGG | + | chr5.2:3735223-3735242 | None:intergenic | 30.0% | |
| CTAACCCTATAACTTCAATA+TGG | - | chr5.2:3735215-3735234 | MS.gene050379:intron | 30.0% | |
| CTTGTATAAAGTATAACCCA+AGG | + | chr5.2:3734185-3734204 | None:intergenic | 30.0% | |
| GAAGAAACTACTTGTACTTT+AGG | - | chr5.2:3734150-3734169 | MS.gene050379:intron | 30.0% | |
| GACAATGCATAAAATATGCA+TGG | - | chr5.2:3733552-3733571 | MS.gene050379:intron | 30.0% | |
| GTATTCTGACCTTAATATCT+AGG | + | chr5.2:3733476-3733495 | None:intergenic | 30.0% | |
| GTGATATGATTGATATAGAG+AGG | - | chr5.2:3736065-3736084 | MS.gene050379:CDS | 30.0% | |
| GTGGTCAATAGTCAAAATTT+AGG | - | chr5.2:3735850-3735869 | MS.gene050379:intron | 30.0% | |
| TAAGTACTAGTGAAACTGTT+TGG | + | chr5.2:3733846-3733865 | None:intergenic | 30.0% | |
| TATATGCATAAGATGTTGCA+AGG | - | chr5.2:3735066-3735085 | MS.gene050379:intron | 30.0% | |
| TCTATATCAATCATATCACG+AGG | + | chr5.2:3736064-3736083 | None:intergenic | 30.0% | |
| TGAACAAAATTGAAAGACGA+AGG | + | chr5.2:3734606-3734625 | None:intergenic | 30.0% | |
| TGTATATGGGATAATAACAC+TGG | + | chr5.2:3735258-3735277 | None:intergenic | 30.0% | |
| TTAGAGCTTAGATTGTCTAT+AGG | + | chr5.2:3735329-3735348 | None:intergenic | 30.0% | |
| TTGTAATTACGTTATGGTCA+TGG | - | chr5.2:3733432-3733451 | MS.gene050379:intron | 30.0% | |
| ! | ACTAATTTGATGGATGACTT+TGG | - | chr5.2:3734009-3734028 | MS.gene050379:intron | 30.0% |
| ! | ATTAAGTTGCTTATCCATAC+AGG | + | chr5.2:3733631-3733650 | None:intergenic | 30.0% |
| ! | CATGTGTACGATGAATTTTT+GGG | - | chr5.2:3734967-3734986 | MS.gene050379:intron | 30.0% |
| ! | CGTTATTGATCTTCTTTTTG+AGG | - | chr5.2:3733188-3733207 | MS.gene050379:CDS | 30.0% |
| ! | GACATTTCAATCATGTTTTG+TGG | - | chr5.2:3735363-3735382 | MS.gene050379:intron | 30.0% |
| ! | GGGTAATTCTTTTATATGCA+TGG | + | chr5.2:3735428-3735447 | None:intergenic | 30.0% |
| ! | GTTAGTCTATCAGATACAAA+GGG | + | chr5.2:3735200-3735219 | None:intergenic | 30.0% |
| ! | TCATGTGTACGATGAATTTT+TGG | - | chr5.2:3734966-3734985 | MS.gene050379:intron | 30.0% |
| ! | TCCAAAACACACTCTTTTAT+TGG | + | chr5.2:3735678-3735697 | None:intergenic | 30.0% |
| ! | TTAAGTTGCTTATCCATACA+GGG | + | chr5.2:3733630-3733649 | None:intergenic | 30.0% |
| !! | ACCAATAAAAGAGTGTGTTT+TGG | - | chr5.2:3735674-3735693 | MS.gene050379:intron | 30.0% |
| !! | CATTGCTGTTATTGACTTAA+AGG | - | chr5.2:3734762-3734781 | MS.gene050379:CDS | 30.0% |
| !! | TTAGTGACTGGTTAGTATTT+TGG | + | chr5.2:3735006-3735025 | None:intergenic | 30.0% |
| !! | TTCAGTTTATAGGCTTTGAA+AGG | - | chr5.2:3735914-3735933 | MS.gene050379:intron | 30.0% |
| !!! | TGAGTGATATTTTTTAGAGG+TGG | - | chr5.2:3735831-3735850 | MS.gene050379:intron | 30.0% |
| !!! | TGGTGAGTGATATTTTTTAG+AGG | - | chr5.2:3735828-3735847 | MS.gene050379:intron | 30.0% |
| ACACATGAAAGGAATCAAGT+TGG | + | chr5.2:3734954-3734973 | None:intergenic | 35.0% | |
| ACACCTTATGGACATATCAT+TGG | - | chr5.2:3733802-3733821 | MS.gene050379:intron | 35.0% | |
| AGAAGAATGAAATCACCAAG+AGG | - | chr5.2:3736188-3736207 | MS.gene050379:CDS | 35.0% | |
| AGAGTGTAACTACAAAGAGA+GGG | + | chr5.2:3735553-3735572 | None:intergenic | 35.0% | |
| ATGTTGAAGTCTCTCTGTAT+CGG | + | chr5.2:3733124-3733143 | None:intergenic | 35.0% | |
| ATTATTCCTACCCAAAGTCT+CGG | - | chr5.2:3735489-3735508 | MS.gene050379:intron | 35.0% | |
| CAATAAGATCAAGGTGGTAT+GGG | + | chr5.2:3734912-3734931 | None:intergenic | 35.0% | |
| CATGGGACTATAAATTTGCA+CGG | + | chr5.2:3734110-3734129 | None:intergenic | 35.0% | |
| GATTGTCTATAGGATAAGTC+AGG | + | chr5.2:3735319-3735338 | None:intergenic | 35.0% | |
| GGTCATATTATTTCCTCACA+GGG | - | chr5.2:3734030-3734049 | MS.gene050379:intron | 35.0% | |
| TATAGTCGAAACATGCTCTT+CGG | - | chr5.2:3734695-3734714 | MS.gene050379:CDS | 35.0% | |
| TATTATAACCGGGTTAATGG+TGG | + | chr5.2:3734058-3734077 | None:intergenic | 35.0% | |
| TATTGTTGTGGATGATGAGT+TGG | + | chr5.2:3735140-3735159 | None:intergenic | 35.0% | |
| TCAATAAGATCAAGGTGGTA+TGG | + | chr5.2:3734913-3734932 | None:intergenic | 35.0% | |
| TGCATAAAATATGCATGGTC+CGG | - | chr5.2:3733557-3733576 | MS.gene050379:intron | 35.0% | |
| TGGAGAAAGATTCTCTTACA+AGG | - | chr5.2:3734553-3734572 | MS.gene050379:intron | 35.0% | |
| TGGTCATATTATTTCCTCAC+AGG | - | chr5.2:3734029-3734048 | MS.gene050379:intron | 35.0% | |
| TGGTCCCACTAAATTCATAT+GGG | + | chr5.2:3735642-3735661 | None:intergenic | 35.0% | |
| TTCCTAATGGTTATTCTGAG+TGG | - | chr5.2:3734306-3734325 | MS.gene050379:intron | 35.0% | |
| TTGGTCCCACTAAATTCATA+TGG | + | chr5.2:3735643-3735662 | None:intergenic | 35.0% | |
| ! | ACTTCAATATGGTATCGAAG+TGG | - | chr5.2:3735226-3735245 | MS.gene050379:intron | 35.0% |
| ! | ATTCTTTTATATGCATGGGG+AGG | + | chr5.2:3735423-3735442 | None:intergenic | 35.0% |
| ! | ATTTTCTTAATAGACTCGGC+AGG | - | chr5.2:3734430-3734449 | MS.gene050379:intron | 35.0% |
| ! | CTTAGTGTTGCTGAAAATTG+TGG | - | chr5.2:3733382-3733401 | MS.gene050379:intron | 35.0% |
| ! | CTTTTTCTTAGGTTTAGGCT+TGG | + | chr5.2:3736170-3736189 | None:intergenic | 35.0% |
| ! | TCTCCATCGTATCTTACTTT+TGG | + | chr5.2:3734539-3734558 | None:intergenic | 35.0% |
| !! | AGTTTATAGGCTTTGAAAGG+TGG | - | chr5.2:3735917-3735936 | MS.gene050379:intron | 35.0% |
| !! | GGTTAGTCTATCAGATACAA+AGG | + | chr5.2:3735201-3735220 | None:intergenic | 35.0% |
| !! | TCAAAATCACGTTGCTGTTT+AGG | - | chr5.2:3734212-3734231 | MS.gene050379:intron | 35.0% |
| !! | TTCAAGTTCTGAAAAAGCTC+CGG | + | chr5.2:3736238-3736257 | None:intergenic | 35.0% |
| !!! | ACCTAAAACAGCTTTTTCGT+GGG | - | chr5.2:3736029-3736048 | MS.gene050379:intron | 35.0% |
| !!! | ACTTAGGCTTTTTTTGGTAG+TGG | + | chr5.2:3733597-3733616 | None:intergenic | 35.0% |
| !!! | CAGGCTTCATTCCATTTTTT+TGG | + | chr5.2:3736096-3736115 | None:intergenic | 35.0% |
| ACAGGGCCTATATACAACTT+AGG | + | chr5.2:3733613-3733632 | None:intergenic | 40.0% | |
| AGCTGGGACAAGATTGTATA+TGG | + | chr5.2:3735272-3735291 | None:intergenic | 40.0% | |
| AGGTCATCATCCACCTTAAT+GGG | + | chr5.2:3736013-3736032 | None:intergenic | 40.0% | |
| AGTATTCGTAAAGCTCCTGT+TGG | - | chr5.2:3733150-3733169 | MS.gene050379:CDS | 40.0% | |
| AGTCAGGGACAGACTATATT+TGG | + | chr5.2:3735303-3735322 | None:intergenic | 40.0% | |
| AGTCTATCAGATACAAAGGG+AGG | + | chr5.2:3735197-3735216 | None:intergenic | 40.0% | |
| AGTTGTATATAGGCCCTGTA+TGG | - | chr5.2:3733614-3733633 | MS.gene050379:intron | 40.0% | |
| ATAGTCGAAACATGCTCTTC+GGG | - | chr5.2:3734696-3734715 | MS.gene050379:CDS | 40.0% | |
| CACCACTCAGAATAACCATT+AGG | + | chr5.2:3734311-3734330 | None:intergenic | 40.0% | |
| CAGCCAATGATATGTCCATA+AGG | + | chr5.2:3733808-3733827 | None:intergenic | 40.0% | |
| CATAAAATATGCATGGTCCG+GGG | - | chr5.2:3733559-3733578 | MS.gene050379:intron | 40.0% | |
| CTGATACGCAAATTTCCAGA+AGG | - | chr5.2:3734739-3734758 | MS.gene050379:CDS | 40.0% | |
| GAGAGGGATCTCCAAAAAAA+TGG | - | chr5.2:3736082-3736101 | MS.gene050379:CDS | 40.0% | |
| GCATAAAATATGCATGGTCC+GGG | - | chr5.2:3733558-3733577 | MS.gene050379:intron | 40.0% | |
| GCTGGGACAAGATTGTATAT+GGG | + | chr5.2:3735271-3735290 | None:intergenic | 40.0% | |
| GGACTATAAATTTGCACGGA+AGG | + | chr5.2:3734106-3734125 | None:intergenic | 40.0% | |
| GGATTCATACCCAACTGTAA+TGG | - | chr5.2:3734783-3734802 | MS.gene050379:CDS | 40.0% | |
| GGGTCCCATATGAATTTAGT+GGG | - | chr5.2:3735635-3735654 | MS.gene050379:intron | 40.0% | |
| GTAAGTCCTCCATTACAGTT+GGG | + | chr5.2:3734795-3734814 | None:intergenic | 40.0% | |
| GTATAGGTACCTCTTGTCAT+AGG | + | chr5.2:3733945-3733964 | None:intergenic | 40.0% | |
| GTCAGGGACAGACTATATTT+GGG | + | chr5.2:3735302-3735321 | None:intergenic | 40.0% | |
| GTCTTCCTGTGAATCAAAGT+TGG | + | chr5.2:3735963-3735982 | None:intergenic | 40.0% | |
| GTTGCTCAATAAGATCAAGG+TGG | + | chr5.2:3734918-3734937 | None:intergenic | 40.0% | |
| TACATACCCATCAACCACAA+GGG | + | chr5.2:3734372-3734391 | None:intergenic | 40.0% | |
| TAGGTCATCATCCACCTTAA+TGG | + | chr5.2:3736014-3736033 | None:intergenic | 40.0% | |
| TCAATAACAGCAATGCCTTC+TGG | + | chr5.2:3734757-3734776 | None:intergenic | 40.0% | |
| TCTTTCATAGGCTTAGTGAC+TGG | + | chr5.2:3735018-3735037 | None:intergenic | 40.0% | |
| TGGGTCCCATATGAATTTAG+TGG | - | chr5.2:3735634-3735653 | MS.gene050379:intron | 40.0% | |
| TGTAAGTCCTCCATTACAGT+TGG | + | chr5.2:3734796-3734815 | None:intergenic | 40.0% | |
| TTACATACCCATCAACCACA+AGG | + | chr5.2:3734373-3734392 | None:intergenic | 40.0% | |
| TTCATACCCAACTGTAATGG+AGG | - | chr5.2:3734786-3734805 | MS.gene050379:CDS | 40.0% | |
| ! | AACTGTAATGGAGGACTTAC+AGG | - | chr5.2:3734795-3734814 | MS.gene050379:intron | 40.0% |
| ! | ATAAAGCTTTTCAGCCAACC+CGG | - | chr5.2:3734342-3734361 | MS.gene050379:intron | 40.0% |
| ! | CTTCTGGAAATTTGCGTATC+AGG | + | chr5.2:3734741-3734760 | None:intergenic | 40.0% |
| ! | GAGAGTGTAACTACAAAGAG+AGG | + | chr5.2:3735554-3735573 | None:intergenic | 40.0% |
| ! | GTATCGGTCGAAAATTTGAC+CGG | + | chr5.2:3733108-3733127 | None:intergenic | 40.0% |
| ! | TGATCCTAAAGTGCCCATTA+AGG | - | chr5.2:3735997-3736016 | MS.gene050379:intron | 40.0% |
| !! | ACTTTAGGTTCTAAAGCCCT+TGG | - | chr5.2:3734165-3734184 | MS.gene050379:intron | 40.0% |
| !! | ATGGGCACTTTAGGATCATT+AGG | + | chr5.2:3735995-3736014 | None:intergenic | 40.0% |
| !! | CACTTTAGGATCATTAGGGT+AGG | + | chr5.2:3735990-3736009 | None:intergenic | 40.0% |
| !! | CTTTAGGTTCTAAAGCCCTT+GGG | - | chr5.2:3734166-3734185 | MS.gene050379:intron | 40.0% |
| !! | TCCCACGAAAAAGCTGTTTT+AGG | + | chr5.2:3736033-3736052 | None:intergenic | 40.0% |
| !! | TGGGCACTTTAGGATCATTA+GGG | + | chr5.2:3735994-3736013 | None:intergenic | 40.0% |
| !! | TGTTAGCTTTCATGTCCACA+TGG | + | chr5.2:3734487-3734506 | None:intergenic | 40.0% |
| !!! | GACCTAAAACAGCTTTTTCG+TGG | - | chr5.2:3736028-3736047 | MS.gene050379:intron | 40.0% |
| AAGATGGGCATTAGTCAGCT+TGG | + | chr5.2:3736215-3736234 | None:intergenic | 45.0% | |
| ACGACGAGGACATACAACTT+AGG | + | chr5.2:3733511-3733530 | None:intergenic | 45.0% | |
| ACGAGTCCTACCAATTCTTG+TGG | - | chr5.2:3735614-3735633 | MS.gene050379:intron | 45.0% | |
| ATCGAGCATAGCAGCAAACA+AGG | - | chr5.2:3733050-3733069 | MS.gene050379:CDS | 45.0% | |
| ATTAGTCAGCTTGGTCCTCT+TGG | + | chr5.2:3736206-3736225 | None:intergenic | 45.0% | |
| CATATGGGACCCACAAGAAT+TGG | + | chr5.2:3735627-3735646 | None:intergenic | 45.0% | |
| CGAGTCCTACCAATTCTTGT+GGG | - | chr5.2:3735615-3735634 | MS.gene050379:intron | 45.0% | |
| CTACTAACACTGCAAAGAGG+AGG | - | chr5.2:3736116-3736135 | MS.gene050379:CDS | 45.0% | |
| CTCTTTGCAGTGTTAGTAGC+AGG | + | chr5.2:3736115-3736134 | None:intergenic | 45.0% | |
| CTGAAAAAGCTCCGGAAGAT+GGG | + | chr5.2:3736230-3736249 | None:intergenic | 45.0% | |
| CTGCTACTAACACTGCAAAG+AGG | - | chr5.2:3736113-3736132 | MS.gene050379:CDS | 45.0% | |
| GCAATTCCTCCTATGACAAG+AGG | - | chr5.2:3733933-3733952 | MS.gene050379:intron | 45.0% | |
| GCTGTCCAACTTTGATTCAC+AGG | - | chr5.2:3735955-3735974 | MS.gene050379:intron | 45.0% | |
| TAGGTACCTCTTGTCATAGG+AGG | + | chr5.2:3733942-3733961 | None:intergenic | 45.0% | |
| TATACTCAGATGACTCGCTG+TGG | - | chr5.2:3735808-3735827 | MS.gene050379:intron | 45.0% | |
| TCAGCTTGACTCAGTTGGTT+GGG | - | chr5.2:3733530-3733549 | MS.gene050379:intron | 45.0% | |
| TCTGAAAAAGCTCCGGAAGA+TGG | + | chr5.2:3736231-3736250 | None:intergenic | 45.0% | |
| ! | AGAGAGGGTGCATATACACT+TGG | + | chr5.2:3735538-3735557 | None:intergenic | 45.0% |
| ! | TCCACCTTAATGGGCACTTT+AGG | + | chr5.2:3736004-3736023 | None:intergenic | 45.0% |
| ! | TCCTAAAGTGCCCATTAAGG+TGG | - | chr5.2:3736000-3736019 | MS.gene050379:intron | 45.0% |
| !! | ATAGGCTTTGAAAGGTGGCA+GGG | - | chr5.2:3735922-3735941 | MS.gene050379:intron | 45.0% |
| !! | TATAGGCTTTGAAAGGTGGC+AGG | - | chr5.2:3735921-3735940 | MS.gene050379:intron | 45.0% |
| !!! | AGGCTTTTTTTGGTAGTGGC+CGG | + | chr5.2:3733593-3733612 | None:intergenic | 45.0% |
| ACAGGGATCCACCATTAACC+CGG | - | chr5.2:3734047-3734066 | MS.gene050379:intron | 50.0% | |
| AGGGAGGAACGTGAATACTC+AGG | + | chr5.2:3735181-3735200 | None:intergenic | 50.0% | |
| ATACCCATCAACCACAAGGG+AGG | + | chr5.2:3734369-3734388 | None:intergenic | 50.0% | |
| CGCTTCATTTGAGCTCCAAC+AGG | + | chr5.2:3733168-3733187 | None:intergenic | 50.0% | |
| CTCAGAGAAGCCGAGACTTT+GGG | + | chr5.2:3735502-3735521 | None:intergenic | 50.0% | |
| GCTGACTAATGCCCATCTTC+CGG | - | chr5.2:3736216-3736235 | MS.gene050379:CDS | 50.0% | |
| GTCAGCTTGACTCAGTTGGT+TGG | - | chr5.2:3733529-3733548 | MS.gene050379:intron | 50.0% | |
| TCTCAGAGAAGCCGAGACTT+TGG | + | chr5.2:3735503-3735522 | None:intergenic | 50.0% | |
| TGAAAGGTGGCAGGGAGATT+TGG | - | chr5.2:3735930-3735949 | MS.gene050379:intron | 50.0% | |
| TGGGACCCACAAGAATTGGT+AGG | + | chr5.2:3735623-3735642 | None:intergenic | 50.0% | |
| TGTGCCAAATGCTCTTGCTC+CGG | - | chr5.2:3733086-3733105 | MS.gene050379:CDS | 50.0% | |
| ! | AGGAGTGCAGCACAAATGGA+AGG | - | chr5.2:3736136-3736155 | MS.gene050379:CDS | 50.0% |
| ! | GACTCGGCAGGCTTTAACAT+TGG | - | chr5.2:3734442-3734461 | MS.gene050379:CDS | 50.0% |
| !! | CTTCTCTGAGACAAGGCACA+AGG | - | chr5.2:3735512-3735531 | MS.gene050379:intron | 50.0% |
| !! | GTTAATGGTGGATCCCTGTG+AGG | + | chr5.2:3734046-3734065 | None:intergenic | 50.0% |
| !! | TTGACCGGAGCAAGAGCATT+TGG | + | chr5.2:3733093-3733112 | None:intergenic | 50.0% |
| !!! | GCTTTTTTTGGTAGTGGCCG+GGG | + | chr5.2:3733591-3733610 | None:intergenic | 50.0% |
| !!! | GGCTTTTTTTGGTAGTGGCC+GGG | + | chr5.2:3733592-3733611 | None:intergenic | 50.0% |
| ACTGAGTCAAGCTGACGACG+AGG | + | chr5.2:3733525-3733544 | None:intergenic | 55.0% | |
| ATCAACCACAAGGGAGGTCC+GGG | + | chr5.2:3734363-3734382 | None:intergenic | 55.0% | |
| CATCAACCACAAGGGAGGTC+CGG | + | chr5.2:3734364-3734383 | None:intergenic | 55.0% | |
| CGTCGTCAGCTTGACTCAGT+TGG | - | chr5.2:3733525-3733544 | MS.gene050379:intron | 55.0% | |
| GAGAAGCCGAGACTTTGGGT+AGG | + | chr5.2:3735498-3735517 | None:intergenic | 55.0% | |
| GGACCTCCCTTGTGGTTGAT+GGG | - | chr5.2:3734363-3734382 | MS.gene050379:intron | 55.0% | |
| ! | GAGGAGGAGTGCAGCACAAA+TGG | - | chr5.2:3736132-3736151 | MS.gene050379:CDS | 55.0% |
| !! | GTCTCGGCTTCTCTGAGACA+AGG | - | chr5.2:3735505-3735524 | MS.gene050379:intron | 55.0% |
| ATGGTCCGGGGTTCAAACCC+CGG | - | chr5.2:3733571-3733590 | MS.gene050379:intron | 60.0% | |
| CGGACCTCCCTTGTGGTTGA+TGG | - | chr5.2:3734362-3734381 | MS.gene050379:intron | 60.0% | |
| ACCACAAGGGAGGTCCGGGT+TGG | + | chr5.2:3734359-3734378 | None:intergenic | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | + | chr5.2:3733579-3733598 | None:intergenic | 65.0% | |
| GCCAACCCGGACCTCCCTTG+TGG | - | chr5.2:3734355-3734374 | MS.gene050379:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 3732988 | 3736267 | 3732988 | ID=MS.gene050379 |
| chr5.2 | mRNA | 3732988 | 3736267 | 3732988 | ID=MS.gene050379.t1;Parent=MS.gene050379 |
| chr5.2 | exon | 3736046 | 3736267 | 3736046 | ID=MS.gene050379.t1.exon1;Parent=MS.gene050379.t1 |
| chr5.2 | CDS | 3736046 | 3736267 | 3736046 | ID=cds.MS.gene050379.t1;Parent=MS.gene050379.t1 |
| chr5.2 | exon | 3734681 | 3734812 | 3734681 | ID=MS.gene050379.t1.exon2;Parent=MS.gene050379.t1 |
| chr5.2 | CDS | 3734681 | 3734812 | 3734681 | ID=cds.MS.gene050379.t1;Parent=MS.gene050379.t1 |
| chr5.2 | exon | 3734439 | 3734555 | 3734439 | ID=MS.gene050379.t1.exon3;Parent=MS.gene050379.t1 |
| chr5.2 | CDS | 3734439 | 3734555 | 3734439 | ID=cds.MS.gene050379.t1;Parent=MS.gene050379.t1 |
| chr5.2 | exon | 3732988 | 3733329 | 3732988 | ID=MS.gene050379.t1.exon4;Parent=MS.gene050379.t1 |
| chr5.2 | CDS | 3732988 | 3733329 | 3732988 | ID=cds.MS.gene050379.t1;Parent=MS.gene050379.t1 |
| Gene Sequence |
| Protein sequence |
