AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049281


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049281.t1 MTR_3g096330 86.364 682 75 6 1 672 102 775 0.0 1143
MS.gene049281.t1 MTR_7g110710 53.699 365 168 1 1 365 69 432 3.33e-144 428
MS.gene049281.t1 MTR_7g110710 53.699 365 168 1 1 365 69 432 1.08e-143 427
MS.gene049281.t1 MTR_1g086030 52.459 366 172 2 1 366 108 471 3.97e-135 407
MS.gene049281.t1 MTR_3g449590 50.543 368 178 2 1 365 73 439 1.72e-134 403
MS.gene049281.t1 MTR_8g098840 50.000 372 182 2 1 369 70 440 4.83e-131 395
MS.gene049281.t1 MTR_7g088550 50.270 370 179 2 1 365 76 445 1.85e-127 385
MS.gene049281.t1 MTR_5g090160 52.055 365 170 2 5 365 75 438 3.20e-124 376
MS.gene049281.t1 MTR_1g100060 49.319 367 184 1 1 365 119 485 1.51e-121 372
MS.gene049281.t1 MTR_2g435340 48.641 368 188 1 1 367 63 430 1.86e-121 369
MS.gene049281.t1 MTR_4g124980 49.866 373 174 6 1 365 100 467 3.94e-121 370
MS.gene049281.t1 MTR_1g086030 51.632 337 161 2 30 366 33 367 4.02e-121 367
MS.gene049281.t1 MTR_1g100050 47.554 368 191 1 1 366 76 443 2.83e-120 367
MS.gene049281.t1 MTR_4g120730 47.541 366 191 1 1 365 66 431 3.84e-119 363
MS.gene049281.t1 MTR_2g042740 49.189 370 175 6 1 362 82 446 6.62e-118 361
MS.gene049281.t1 MTR_7g078680 47.312 372 192 2 1 369 81 451 2.54e-117 360
MS.gene049281.t1 MTR_8g028725 47.945 365 188 1 7 369 87 451 2.13e-116 357
MS.gene049281.t1 MTR_1g099850 47.027 370 188 2 1 365 81 447 1.08e-115 355
MS.gene049281.t1 MTR_1g100040 46.594 367 194 1 1 365 82 448 2.33e-115 355
MS.gene049281.t1 MTR_2g435340 46.462 325 173 1 44 367 41 365 3.81e-100 312
MS.gene049281.t1 MTR_8g007300 60.194 206 80 2 448 651 1 206 2.68e-77 246
MS.gene049281.t1 MTR_2g083670 49.162 179 76 1 1 179 66 229 4.43e-52 180
MS.gene049281.t1 MTR_1g060120 42.169 166 90 2 468 627 21 186 6.23e-35 132
MS.gene049281.t1 MTR_1g085500 36.493 211 128 4 459 667 9 215 2.30e-34 130
MS.gene049281.t1 MTR_7g111240 38.974 195 100 4 471 648 19 211 6.32e-34 129
MS.gene049281.t1 MTR_7g111240 38.974 195 97 4 471 648 19 208 8.12e-34 129
MS.gene049281.t1 MTR_1g085140 40.000 195 98 4 471 648 23 215 9.38e-33 126
MS.gene049281.t1 MTR_1g112200 45.185 135 74 0 493 627 38 172 1.58e-30 119
MS.gene049281.t1 MTR_5g036570 38.220 191 113 4 470 657 25 213 6.38e-30 118
MS.gene049281.t1 MTR_2g030855 38.500 200 103 5 471 662 21 208 1.93e-29 116
MS.gene049281.t1 MTR_1g079490 36.364 198 118 2 454 643 4 201 3.67e-29 116
MS.gene049281.t1 MTR_2g041580 35.829 187 107 3 446 631 1 175 7.03e-29 114
MS.gene049281.t1 MTR_1g023770 39.267 191 100 5 461 643 11 193 7.19e-29 114
MS.gene049281.t1 MTR_2g041570 37.363 182 98 4 457 631 3 175 1.92e-28 113
MS.gene049281.t1 MTR_6g005330 36.946 203 117 4 448 643 1 199 2.25e-28 114
MS.gene049281.t1 MTR_2g041550 35.294 187 108 3 446 631 1 175 2.92e-28 113
MS.gene049281.t1 MTR_4g017050 38.418 177 103 3 455 627 5 179 7.16e-28 112
MS.gene049281.t1 MTR_2g031270 38.462 195 100 5 476 662 27 209 9.21e-28 111
MS.gene049281.t1 MTR_5g046410 37.853 177 104 3 455 627 5 179 2.39e-27 110
MS.gene049281.t1 MTR_5g046430 37.853 177 104 3 455 627 5 179 2.39e-27 110
MS.gene049281.t1 MTR_4g017030 37.853 177 104 3 455 627 5 179 2.39e-27 110
MS.gene049281.t1 MTR_4g017040 38.202 178 101 4 457 627 4 179 2.58e-27 110
MS.gene049281.t1 MTR_6g005360 36.000 200 114 4 457 643 1 199 3.53e-27 110
MS.gene049281.t1 MTR_6g005310 35.500 200 115 4 457 643 1 199 3.78e-27 110
MS.gene049281.t1 MTR_2g042750 43.827 162 61 5 8 166 148 282 3.95e-27 112
MS.gene049281.t1 MTR_6g005340 36.816 201 111 5 457 643 1 199 4.54e-27 110
MS.gene049281.t1 MTR_2g019250 37.640 178 105 3 454 627 4 179 5.64e-27 109
MS.gene049281.t1 MTR_6g005380 38.587 184 104 5 448 627 1 179 6.82e-26 106
MS.gene049281.t1 MTR_8g020630 35.593 177 101 5 451 626 5 169 2.07e-25 105
MS.gene049281.t1 MTR_6g048610 37.572 173 71 3 168 340 24 159 5.54e-24 99.4
MS.gene049281.t1 MTR_2g036120 34.118 170 103 2 456 625 8 168 1.04e-23 100
MS.gene049281.t1 MTR_8g020590 32.386 176 115 3 457 631 1 173 1.34e-23 99.8
MS.gene049281.t1 MTR_2g030895 38.286 175 92 5 497 662 7 174 3.15e-23 97.8
MS.gene049281.t1 MTR_4g010340 35.227 176 99 5 451 625 3 164 4.97e-23 97.8
MS.gene049281.t1 MTR_8g020650 33.962 159 90 3 474 626 20 169 5.53e-23 97.8
MS.gene049281.t1 MTR_8g020770 36.313 179 103 3 448 624 1 170 5.94e-23 97.8
MS.gene049281.t1 MTR_8g020760 34.426 183 107 4 451 631 5 176 7.02e-23 97.8
MS.gene049281.t1 MTR_2g045100 32.571 175 107 3 451 625 5 168 7.44e-23 97.4
MS.gene049281.t1 MTR_2g044040 34.118 170 103 2 456 625 8 168 1.64e-22 96.7
MS.gene049281.t1 MTR_3g019650 34.637 179 109 4 454 632 4 174 1.88e-22 96.3
MS.gene049281.t1 MTR_2g030865 38.286 175 92 5 497 662 7 174 3.91e-22 94.7
MS.gene049281.t1 MTR_8g020763 35.673 171 91 6 463 631 2 155 4.24e-22 94.7
MS.gene049281.t1 MTR_5g043350 30.769 247 143 7 68 307 112 337 4.82e-22 99.4
MS.gene049281.t1 MTR_5g031460 30.939 181 114 2 451 631 5 174 1.26e-21 94.0
MS.gene049281.t1 MTR_3g073170 34.043 188 109 5 446 631 1 175 1.88e-21 93.6
MS.gene049281.t1 MTR_0284s0010 33.143 175 106 3 451 625 5 168 3.17e-21 92.8
MS.gene049281.t1 MTR_6g005350 37.430 179 106 4 448 624 1 175 4.82e-21 92.8
MS.gene049281.t1 MTR_8g020670 30.286 175 113 2 452 626 4 169 6.19e-21 92.0
MS.gene049281.t1 MTR_6g005630 32.227 211 117 6 78 281 133 324 9.97e-21 95.9
MS.gene049281.t1 MTR_3g019710 33.523 176 110 3 457 632 7 175 1.90e-20 90.5
MS.gene049281.t1 MTR_3g084380 30.290 241 140 6 73 307 110 328 2.17e-20 94.4
MS.gene049281.t1 MTR_8g020610 35.758 165 88 4 464 626 19 167 2.66e-20 90.1
MS.gene049281.t1 MTR_3g019680 33.333 165 107 2 468 632 13 174 3.09e-20 90.1
MS.gene049281.t1 MTR_7g011340 36.842 133 83 1 493 625 37 168 3.64e-20 89.7
MS.gene049281.t1 MTR_8g065030 26.797 306 196 8 78 372 153 441 3.83e-20 94.4
MS.gene049281.t1 MTR_2g019780 32.124 193 110 6 446 632 1 178 1.41e-19 88.2
MS.gene049281.t1 MTR_1g052315 28.261 230 139 5 88 307 160 373 1.60e-19 92.4
MS.gene049281.t1 MTR_3g084360 32.212 208 111 6 78 277 117 302 6.45e-19 89.7
MS.gene049281.t1 MTR_3g030540 26.284 331 201 11 46 362 134 435 1.80e-18 89.0
MS.gene049281.t1 MTR_2g031300 44.340 106 56 2 497 599 7 112 4.81e-18 82.0
MS.gene049281.t1 MTR_4g084050 30.268 261 135 8 80 334 117 336 7.13e-18 86.7
MS.gene049281.t1 MTR_6g028080 27.241 290 176 9 88 365 133 399 1.10e-17 86.3
MS.gene049281.t1 MTR_2g103410 27.273 275 172 8 73 336 143 400 1.47e-17 86.3
MS.gene049281.t1 MTR_7g091840 30.000 210 120 5 78 277 154 346 2.71e-17 84.7
MS.gene049281.t1 MTR_8g020750 33.333 183 111 4 446 627 1 173 2.79e-17 81.6
MS.gene049281.t1 MTR_3g054320 29.245 212 121 6 78 281 123 313 3.20e-17 84.7
MS.gene049281.t1 MTR_2g060350 26.557 305 186 10 76 362 157 441 4.56e-17 84.7
MS.gene049281.t1 MTR_2g049400 33.333 198 108 5 88 277 122 303 8.96e-17 83.2
MS.gene049281.t1 MTR_5g033680 28.972 214 130 5 78 281 147 348 1.17e-16 83.6
MS.gene049281.t1 MTR_4g052770 39.806 103 61 1 532 633 74 176 1.38e-16 79.3
MS.gene049281.t1 MTR_8g077320 29.327 208 135 4 72 274 93 293 1.42e-16 82.4
MS.gene049281.t1 MTR_2g086640 31.016 187 107 6 452 633 5 174 1.72e-16 79.0
MS.gene049281.t1 MTR_8g009810 26.165 279 181 6 88 357 131 393 1.73e-16 82.4
MS.gene049281.t1 MTR_4g052780 39.806 103 61 1 532 633 74 176 2.15e-16 79.0
MS.gene049281.t1 MTR_7g110050 31.527 203 114 5 87 277 166 355 2.62e-16 82.4
MS.gene049281.t1 MTR_5g034090 26.695 236 120 6 78 277 209 427 9.70e-16 81.3
MS.gene049281.t1 MTR_1g086390 32.850 207 107 7 87 277 180 370 1.11e-15 80.5
MS.gene049281.t1 MTR_7g092470 25.266 376 209 14 17 365 88 418 2.38e-15 79.7
MS.gene049281.t1 MTR_4g083660 26.923 312 195 11 64 362 82 373 3.25e-15 78.2
MS.gene049281.t1 MTR_8g065010 29.148 223 115 5 87 277 203 414 3.33e-15 79.3
MS.gene049281.t1 MTR_4g094715 31.343 201 108 7 88 273 163 348 3.70e-15 79.0
MS.gene049281.t1 MTR_2g086620 38.235 102 62 1 533 633 74 175 4.91e-15 74.7
MS.gene049281.t1 MTR_6g005630 28.708 209 104 6 78 281 133 301 5.10e-15 78.2
MS.gene049281.t1 MTR_1g012390 25.436 287 190 6 88 366 126 396 8.52e-15 77.4
MS.gene049281.t1 MTR_7g091850 28.440 218 129 6 78 285 163 363 1.23e-14 77.0
MS.gene049281.t1 MTR_2g086630 37.255 102 63 1 533 633 74 175 1.28e-14 73.6
MS.gene049281.t1 MTR_2g103650 28.708 209 125 6 78 277 119 312 1.53e-14 76.6
MS.gene049281.t1 MTR_8g010110 29.545 220 126 6 78 289 117 315 1.56e-14 76.3
MS.gene049281.t1 MTR_8g008700 29.075 227 123 8 88 307 51 246 2.07e-14 74.7
MS.gene049281.t1 MTR_8g031180 32.692 156 82 3 129 277 71 210 2.46e-14 74.3
MS.gene049281.t1 MTR_8g008765 29.075 227 123 8 88 307 128 323 4.84e-14 74.3
MS.gene049281.t1 MTR_8g010080 29.787 235 129 9 51 277 96 302 5.29e-14 74.7
MS.gene049281.t1 MTR_8g010070 29.108 213 122 5 73 277 113 304 1.28e-13 73.6
MS.gene049281.t1 MTR_7g035415 30.348 201 110 7 85 277 136 314 1.65e-13 72.8
MS.gene049281.t1 MTR_2g032710 29.500 200 115 6 88 274 165 351 1.99e-13 73.6
MS.gene049281.t1 MTR_8g010090 29.545 220 126 6 78 289 117 315 4.53e-13 72.0
MS.gene049281.t1 MTR_4g027415 34.906 106 68 1 494 599 38 142 2.13e-12 65.5
MS.gene049281.t1 MTR_3g019810 29.592 196 125 4 474 669 126 308 2.23e-12 68.9
MS.gene049281.t1 MTR_8g010050 28.986 207 113 7 73 271 113 293 5.77e-12 68.2
MS.gene049281.t1 MTR_2g103410 28.421 190 109 6 73 252 143 315 8.37e-12 67.4
MS.gene049281.t1 MTR_2g029170 26.667 285 184 9 88 362 91 360 2.69e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049281.t1 AT4G33440 72.603 365 100 0 1 365 98 462 0.0 567
MS.gene049281.t1 AT4G23820 54.054 370 168 2 1 369 67 435 1.52e-138 413
MS.gene049281.t1 AT3G62110 54.076 368 166 2 1 365 69 436 5.16e-137 410
MS.gene049281.t1 AT3G62110 54.076 368 166 2 1 365 69 436 5.16e-137 410
MS.gene049281.t1 AT5G41870 52.941 357 167 1 9 365 80 435 4.13e-135 404
MS.gene049281.t1 AT4G23500 49.725 364 181 1 1 362 94 457 3.84e-122 373
MS.gene049281.t1 AT3G61490 46.594 367 194 1 1 365 86 452 3.43e-120 367
MS.gene049281.t1 AT3G61490 46.594 367 194 1 1 365 71 437 4.04e-120 367
MS.gene049281.t1 AT3G61490 46.594 367 194 1 1 365 71 437 4.04e-120 367
MS.gene049281.t1 AT3G61490 46.594 367 194 1 1 365 71 437 4.04e-120 367
MS.gene049281.t1 AT3G61490 46.594 367 194 1 1 365 184 550 6.32e-120 370
MS.gene049281.t1 AT3G48950 45.431 383 206 2 1 380 71 453 1.55e-118 362
MS.gene049281.t1 AT2G23900 45.205 365 197 2 8 369 89 453 2.68e-111 344
MS.gene049281.t1 AT3G42950 45.528 369 196 5 1 365 92 459 5.32e-111 343
MS.gene049281.t1 AT1G19170 47.778 360 175 6 11 362 124 478 1.10e-110 343
MS.gene049281.t1 AT3G16850 44.932 365 200 1 1 365 66 429 1.86e-106 331
MS.gene049281.t1 AT3G06770 44.353 363 201 1 4 365 3 365 3.30e-104 322
MS.gene049281.t1 AT3G06770 44.353 363 201 1 4 365 3 365 3.30e-104 322
MS.gene049281.t1 AT3G06770 43.514 370 208 1 1 369 69 438 5.99e-104 324
MS.gene049281.t1 AT3G06770 43.514 370 208 1 1 369 70 439 6.66e-104 324
MS.gene049281.t1 AT5G49215 43.478 368 205 1 1 365 69 436 2.11e-102 320
MS.gene049281.t1 AT5G49215 43.478 368 205 1 1 365 67 434 2.12e-102 320
MS.gene049281.t1 AT3G06770 41.590 327 190 1 40 365 21 347 7.89e-85 271
MS.gene049281.t1 AT5G61750 48.454 194 98 2 457 648 3 196 5.74e-58 195
MS.gene049281.t1 AT1G02335 41.711 187 104 3 448 633 2 184 2.26e-35 133
MS.gene049281.t1 AT1G09560 44.311 167 88 3 469 633 21 184 1.31e-33 128
MS.gene049281.t1 AT3G62020 39.560 182 103 4 454 633 8 184 3.99e-33 127
MS.gene049281.t1 AT5G26700 38.889 180 107 2 455 633 4 181 8.53e-32 123
MS.gene049281.t1 AT3G62020 43.750 144 79 2 492 633 12 155 4.43e-31 120
MS.gene049281.t1 AT3G05930 40.678 177 101 2 452 626 3 177 5.33e-31 121
MS.gene049281.t1 AT5G38960 39.645 169 97 3 464 627 17 185 1.33e-30 120
MS.gene049281.t1 AT1G10460 40.230 174 95 4 471 635 18 191 2.64e-30 119
MS.gene049281.t1 AT5G38930 40.964 166 95 2 471 633 25 190 2.34e-29 116
MS.gene049281.t1 AT5G38910 36.073 219 132 5 448 662 1 215 7.07e-29 115
MS.gene049281.t1 AT5G38940 38.919 185 109 3 446 627 1 184 7.68e-29 115
MS.gene049281.t1 AT5G38940 38.919 185 109 3 446 627 25 208 1.54e-28 115
MS.gene049281.t1 AT5G20630 36.047 172 107 2 457 627 3 172 1.62e-28 114
MS.gene049281.t1 AT3G05950 39.535 172 99 3 459 626 13 183 1.96e-27 111
MS.gene049281.t1 AT1G72610 37.107 159 97 2 474 631 17 173 2.03e-27 110
MS.gene049281.t1 AT3G10080 38.125 160 96 1 471 627 25 184 3.77e-27 110
MS.gene049281.t1 AT4G14630 32.883 222 140 5 446 662 1 218 4.53e-27 110
MS.gene049281.t1 AT5G39110 33.641 217 125 5 458 662 7 216 5.14e-27 110
MS.gene049281.t1 AT3G04200 37.791 172 102 3 459 626 14 184 7.25e-27 109
MS.gene049281.t1 AT5G39180 33.333 222 123 5 459 662 1 215 7.66e-27 109
MS.gene049281.t1 AT5G39150 33.333 222 123 5 459 662 1 215 7.66e-27 109
MS.gene049281.t1 AT3G10080 37.423 163 99 1 471 630 96 258 1.12e-26 111
MS.gene049281.t1 AT3G04190 40.000 155 88 3 476 626 30 183 1.87e-26 108
MS.gene049281.t1 AT5G39120 34.500 200 115 4 472 662 23 215 2.30e-26 108
MS.gene049281.t1 AT3G04170 34.529 223 128 5 454 661 8 227 1.19e-25 106
MS.gene049281.t1 AT3G04180 38.994 159 92 3 472 626 26 183 2.09e-25 105
MS.gene049281.t1 AT1G18970 39.130 184 100 5 453 633 13 187 5.37e-24 101
MS.gene049281.t1 AT5G39130 33.846 195 119 4 458 643 10 203 1.62e-23 100
MS.gene049281.t1 AT5G39160 33.333 195 120 4 458 643 10 203 2.44e-23 99.4
MS.gene049281.t1 AT3G04150 35.838 173 106 3 459 627 13 184 2.60e-23 99.4
MS.gene049281.t1 AT5G39190 33.333 195 120 4 458 643 10 203 3.41e-23 99.0
MS.gene049281.t1 AT1G18980 37.895 190 108 5 448 633 4 187 5.31e-23 98.2
MS.gene049281.t1 AT3G04150 34.595 185 105 4 459 627 13 197 6.57e-22 95.9
MS.gene049281.t1 AT5G39160 33.333 195 116 4 458 643 10 199 8.01e-22 94.7
MS.gene049281.t1 AT3G15720 28.099 363 204 16 78 426 48 367 1.07e-20 95.1
MS.gene049281.t1 AT3G15720 31.390 223 119 7 78 289 112 311 1.88e-20 95.5
MS.gene049281.t1 AT3G15720 31.390 223 119 7 78 289 111 310 1.96e-20 95.1
MS.gene049281.t1 AT1G70500 27.835 291 182 7 78 357 155 428 3.13e-20 94.7
MS.gene049281.t1 AT3G15720 30.942 223 117 7 78 289 111 307 8.93e-20 93.2
MS.gene049281.t1 AT3G26610 32.692 208 120 5 78 277 155 350 1.37e-19 92.8
MS.gene049281.t1 AT3G57790 27.083 336 184 10 14 336 76 363 5.98e-19 90.9
MS.gene049281.t1 AT3G57790 27.083 336 184 10 14 336 76 363 5.98e-19 90.9
MS.gene049281.t1 AT1G56710 31.401 207 116 4 88 281 148 341 1.60e-18 89.4
MS.gene049281.t1 AT3G57510 26.792 265 166 7 85 338 163 410 3.49e-18 88.2
MS.gene049281.t1 AT5G39160 37.984 129 72 2 523 643 53 181 8.13e-18 82.8
MS.gene049281.t1 AT5G39190 37.984 129 72 2 523 643 53 181 8.53e-18 82.8
MS.gene049281.t1 AT4G35670 31.401 207 115 6 78 277 8 194 8.63e-18 84.7
MS.gene049281.t1 AT5G17200 27.615 239 157 4 67 305 116 338 8.90e-18 86.7
MS.gene049281.t1 AT4G35670 31.401 207 115 6 78 277 115 301 9.89e-18 86.3
MS.gene049281.t1 AT5G27530 31.818 220 113 6 73 285 139 328 1.57e-17 86.3
MS.gene049281.t1 AT2G41850 27.857 280 165 10 73 341 150 403 1.68e-17 85.9
MS.gene049281.t1 AT1G80140 29.412 306 164 12 78 362 61 335 4.31e-17 83.6
MS.gene049281.t1 AT1G23460 25.342 292 190 7 78 358 155 429 4.46e-17 85.1
MS.gene049281.t1 AT1G23460 25.342 292 190 7 78 358 131 405 4.89e-17 84.7
MS.gene049281.t1 AT5G14650 29.952 207 131 4 73 277 134 328 7.01e-17 84.0
MS.gene049281.t1 AT1G02460 31.776 214 119 6 78 277 181 381 1.02e-16 84.0
MS.gene049281.t1 AT1G80170 26.885 305 190 9 73 362 137 423 1.31e-16 83.2
MS.gene049281.t1 AT2G43870 27.778 288 184 8 83 362 112 383 2.70e-16 81.6
MS.gene049281.t1 AT4G01890 31.527 203 114 5 88 277 167 357 5.52e-16 81.6
MS.gene049281.t1 AT4G32380 30.093 216 123 6 78 286 118 312 1.14e-15 80.5
MS.gene049281.t1 AT2G43860 29.139 302 172 11 78 362 121 397 1.65e-15 79.7
MS.gene049281.t1 AT1G60590 26.236 263 138 7 63 286 196 441 1.99e-15 80.1
MS.gene049281.t1 AT1G65570 27.090 299 186 10 76 362 118 396 4.12e-15 78.2
MS.gene049281.t1 AT3G07970 25.092 271 173 6 78 341 158 405 7.98e-15 77.8
MS.gene049281.t1 AT1G10640 31.111 180 101 4 114 286 271 434 9.03e-15 78.2
MS.gene049281.t1 AT4G32375 29.808 208 116 7 78 277 19 204 4.06e-14 75.5
MS.gene049281.t1 AT3G59850 27.437 277 178 7 88 356 163 424 4.48e-14 75.5
MS.gene049281.t1 AT3G59850 27.437 277 178 7 88 356 119 380 4.98e-14 75.1
MS.gene049281.t1 AT1G48100 29.064 203 110 5 88 273 178 363 1.63e-13 73.9
MS.gene049281.t1 AT2G43880 28.169 284 180 9 88 362 125 393 2.23e-13 72.8
MS.gene049281.t1 AT2G43890 27.397 292 172 11 88 362 123 391 5.10e-13 71.6
MS.gene049281.t1 AT2G26620 27.097 310 175 13 78 362 117 400 6.92e-13 71.6
MS.gene049281.t1 AT5G14650 28.019 207 130 5 48 252 114 303 9.91e-13 70.1
MS.gene049281.t1 AT1G74820 30.837 227 135 9 447 662 6 221 1.04e-12 68.6
MS.gene049281.t1 AT4G32380 31.319 182 97 6 78 252 118 278 2.25e-12 70.1
MS.gene049281.t1 AT5G44840 29.798 198 111 7 88 277 124 301 2.44e-12 69.7
MS.gene049281.t1 AT5G38910 29.032 217 113 5 448 662 1 178 2.63e-12 66.6
MS.gene049281.t1 AT1G05650 28.205 195 122 4 88 277 122 303 1.37e-11 67.4
MS.gene049281.t1 AT2G43880 30.769 195 117 4 88 277 125 306 1.40e-11 67.0
MS.gene049281.t1 AT2G15450 26.518 313 175 15 78 362 117 402 1.45e-11 67.4
MS.gene049281.t1 AT1G02790 27.935 247 146 9 78 314 135 359 1.47e-11 67.4
MS.gene049281.t1 AT1G80170 29.381 194 102 8 73 252 137 309 2.01e-11 66.2
MS.gene049281.t1 AT5G44830 28.283 198 104 7 88 277 75 242 2.17e-11 66.2
MS.gene049281.t1 AT4G32370 27.586 203 131 4 78 277 127 316 2.21e-11 66.2
MS.gene049281.t1 AT2G15470 26.518 313 175 15 78 362 117 402 3.70e-11 66.2
MS.gene049281.t1 AT2G15460 26.452 310 173 15 78 359 117 399 4.75e-11 65.9
MS.gene049281.t1 AT1G43100 25.641 351 210 12 78 409 117 435 5.30e-11 65.9
MS.gene049281.t1 AT1G05660 27.778 198 119 6 88 277 122 303 6.53e-11 65.1
MS.gene049281.t1 AT1G43090 25.360 347 216 11 78 409 117 435 9.98e-11 65.1

Find 167 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGAATATTACTCTTCT+TGG 0.191405 3.3:-79808165 MS.gene049281:CDS
CCCAATGGAACTTGGCTTAC+TGG 0.203693 3.3:-79810113 MS.gene049281:CDS
GAGATCCCAACCCTGGATTT+TGG 0.211780 3.3:+79806794 None:intergenic
GGGTCTATGCCATCAGTATT+TGG 0.237146 3.3:+79808819 None:intergenic
TTAAATCTAGGAACAGCTTT+TGG 0.253451 3.3:+79808279 None:intergenic
GATGGTAATGGTTCAATAAT+AGG 0.258711 3.3:+79809546 None:intergenic
GGTCTATGCCATCAGTATTT+GGG 0.263899 3.3:+79808820 None:intergenic
ATCATAGTAAGGAGAGTTTC+AGG 0.269968 3.3:-79808540 MS.gene049281:CDS
ATTGAACCATTACCATCTTA+TGG 0.274641 3.3:-79809540 MS.gene049281:CDS
GTCTTTGCTGATGAGTGTTT+TGG 0.278465 3.3:+79807427 None:intergenic
GAACCTCTACTAAACCTAAT+TGG 0.284649 3.3:+79808330 None:intergenic
CCCTTTACACCTTCCAAAAC+TGG 0.285222 3.3:+79808210 None:intergenic
CACTAGCTCTTGGATGATTA+TGG 0.296712 3.3:+79806989 None:intergenic
ATTAAAATATCTTTAAATCT+AGG 0.297195 3.3:+79808267 None:intergenic
GGACCCCATTTGCATGTATA+AGG 0.299795 3.3:+79809481 None:intergenic
GTCCGTAATGTTGTCATTAC+AGG 0.343278 3.3:-79809462 MS.gene049281:intron
TCATGAGCTAATGTGTTAGA+TGG 0.344327 3.3:+79807162 None:intergenic
TTCCTACTCCAGAGCAAGTT+GGG 0.355413 3.3:+79808511 None:intergenic
GCAGGTTCAATAGATGATTC+TGG 0.356320 3.3:-79807114 MS.gene049281:CDS
TTCAACAAAAGCTCCAGTTT+TGG 0.370756 3.3:-79808223 MS.gene049281:CDS
AGAGAGTGAAGATACCAATT+AGG 0.374326 3.3:-79808344 MS.gene049281:CDS
TAATGTTAATGATTTGAGTT+TGG 0.383346 3.3:-79806689 MS.gene049281:CDS
AAAAGTGGTTGGGATCAATA+TGG 0.397049 3.3:-79808591 MS.gene049281:CDS
ATTAGCCTTATACATGCAAA+TGG 0.403281 3.3:-79809486 MS.gene049281:CDS
CCCTCGCTCGCCCTGGTGGT+TGG 0.405144 3.3:-79807733 MS.gene049281:CDS
CTTTATCTTCTCAACTGATT+CGG 0.407952 3.3:+79806747 None:intergenic
CTTTGTTGAGGAAGGTGTAT+TGG 0.411985 3.3:-79806959 MS.gene049281:CDS
TGCAACTCAGGACACGGAAC+GGG 0.413957 3.3:+79808081 None:intergenic
TGACTATTGAATGATGTAAC+AGG 0.419501 3.3:+79807405 None:intergenic
AAGAAATGGAACAAGCCCTT+AGG 0.421816 3.3:+79806865 None:intergenic
ACCTGCTTTGCTTAATTCCA+TGG 0.423219 3.3:+79807131 None:intergenic
TTTGGATCCCACCCATCATC+AGG 0.428591 3.3:+79808297 None:intergenic
ACTTGCTCTGGAGTAGGAAT+AGG 0.431842 3.3:-79808507 MS.gene049281:CDS
TGGCATTGTGAATATGTTGC+TGG 0.435170 3.3:-79808123 MS.gene049281:CDS
TCAGTATTTGGGGCATTAAG+AGG 0.435613 3.3:+79808831 None:intergenic
ACAGGATGGATAGTCCAAAA+AGG 0.436766 3.3:+79809055 None:intergenic
AGGACAAACCTGCAGTAAAC+AGG 0.436828 3.3:+79809037 None:intergenic
TACCTGTAATGACAACATTA+CGG 0.437132 3.3:+79809460 None:intergenic
TTCCATTGGGAATATTAAGC+TGG 0.439113 3.3:+79810126 None:intergenic
ATAGTCAAGACCTAGCAAAA+TGG 0.442610 3.3:-79807389 MS.gene049281:CDS
AACACTCTTGGTATCTCAAT+TGG 0.444841 3.3:-79807048 MS.gene049281:CDS
CTATCCATCCTGTTTACTGC+AGG 0.445563 3.3:-79809045 MS.gene049281:intron
GGAGGATGTGGTGGGAACTT+TGG 0.446844 3.3:-79809171 MS.gene049281:CDS
GGAACTACCCCAACTTGCTC+TGG 0.455672 3.3:-79808519 MS.gene049281:CDS
GTTCGCATAAAATCTGATAA+TGG 0.457515 3.3:-79808414 MS.gene049281:CDS
TTAATATTCCCAATGGAACT+TGG 0.457528 3.3:-79810121 MS.gene049281:CDS
AGAACAGACATTGAAGTTGA+TGG 0.458478 3.3:-79807024 MS.gene049281:CDS
CACCACGATTTAGAAAGAAA+TGG 0.459409 3.3:+79806851 None:intergenic
ACAATGCCATGTTGCAGATA+AGG 0.459697 3.3:+79808137 None:intergenic
ACCAGTAAGCCAAGTTCCAT+TGG 0.460343 3.3:+79810112 None:intergenic
CCCCTTCCATAAGATGGTAA+TGG 0.461775 3.3:+79809534 None:intergenic
AAGATCATCTCACTAGCTCT+TGG 0.463818 3.3:+79806979 None:intergenic
ATGTTGCTGGTTTCACCAAT+GGG 0.465338 3.3:-79808110 MS.gene049281:CDS
TTCCATTTCTTTCTAAATCG+TGG 0.465993 3.3:-79806853 MS.gene049281:CDS
TTTCTGAGTTCATGAGTTCA+AGG 0.470137 3.3:+79809113 None:intergenic
CTTACTATGATATTTGTGCT+AGG 0.471079 3.3:+79808552 None:intergenic
AGGGGAAGAGAGAGGTTAGG+AGG 0.472332 3.3:-79809516 MS.gene049281:CDS
AATAGCCAAAATCCAGGGTT+GGG 0.473458 3.3:-79806799 MS.gene049281:CDS
TCATTCTCCCTCGCTCGCCC+TGG 0.475695 3.3:-79807740 MS.gene049281:CDS
AATCAGTTGAGAAGATAAAG+AGG 0.476922 3.3:-79806744 MS.gene049281:CDS
TTAGCCTTATACATGCAAAT+GGG 0.479452 3.3:-79809485 MS.gene049281:CDS
AGAAATGGAACAAGCCCTTA+GGG 0.481120 3.3:+79806866 None:intergenic
ATGGTCAAGGGAGGATGTGG+TGG 0.481966 3.3:-79809180 MS.gene049281:CDS
GAGGAAGGTGTATTGGAAGC+TGG 0.485772 3.3:-79806952 MS.gene049281:CDS
GGAAGGGGAAGAGAGAGGTT+AGG 0.486356 3.3:-79809519 MS.gene049281:CDS
TTCCCTGGCCTCAACACTCT+TGG 0.487043 3.3:-79807060 MS.gene049281:CDS
TCAAACGATCATCCTGATGA+TGG 0.487099 3.3:-79808309 MS.gene049281:CDS
GATCAAAGGGATGACAATCT+TGG 0.490016 3.3:-79808856 MS.gene049281:CDS
AGTTCACTGCTGGCTTTGCT+AGG 0.494956 3.3:+79807483 None:intergenic
GTGTATAATAGCCAAAATCC+AGG 0.499696 3.3:-79806805 MS.gene049281:CDS
TACCAAGAGTGTTGAGGCCA+GGG 0.502060 3.3:+79807058 None:intergenic
GCCAACCACCAGGGCGAGCG+AGG 0.503709 3.3:+79807732 None:intergenic
ACAGTCTTGGAGTTCACTGC+TGG 0.504235 3.3:+79807473 None:intergenic
TGGATGGTCAAGGGAGGATG+TGG 0.505301 3.3:-79809183 MS.gene049281:CDS
TCTCTTCCCCTTCCATAAGA+TGG 0.508650 3.3:+79809528 None:intergenic
TTCAGTAATGTCGTGATCAA+AGG 0.510450 3.3:-79808870 MS.gene049281:intron
GAAGATAACTACATAGAAAG+TGG 0.512355 3.3:-79808633 MS.gene049281:CDS
ATACCAAGAGTGTTGAGGCC+AGG 0.514315 3.3:+79807057 None:intergenic
TCAGTAATGTCGTGATCAAA+GGG 0.515240 3.3:-79808869 MS.gene049281:intron
CTAGCACAAATATCATAGTA+AGG 0.516295 3.3:-79808551 MS.gene049281:CDS
AGCGGACTGTGCTAATCTAC+AGG 0.517255 3.3:-79807250 MS.gene049281:CDS
GCTTATTCGTATGCTGCTAA+AGG 0.518117 3.3:+79807275 None:intergenic
TTCTCCCTCGCTCGCCCTGG+TGG 0.519386 3.3:-79807737 MS.gene049281:CDS
TGTAGCCATCAAAAGTGGTT+GGG 0.520716 3.3:-79808601 MS.gene049281:CDS
TAATAGCCAAAATCCAGGGT+TGG 0.523741 3.3:-79806800 MS.gene049281:CDS
GAACAGACATTGAAGTTGAT+GGG 0.524364 3.3:-79807023 MS.gene049281:CDS
CAATTGAGAATTTGCACGTG+TGG 0.524965 3.3:-79808452 MS.gene049281:CDS
CCAGTAAGCCAAGTTCCATT+GGG 0.525762 3.3:+79810113 None:intergenic
ACCATGGAATTAAGCAAAGC+AGG 0.525867 3.3:-79807132 MS.gene049281:CDS
AAGATAACTACATAGAAAGT+GGG 0.526266 3.3:-79808632 MS.gene049281:CDS
ATTCCTACTCCAGAGCAAGT+TGG 0.529795 3.3:+79808510 None:intergenic
AACCATTACCATCTTATGGA+AGG 0.530877 3.3:-79809536 MS.gene049281:CDS
AATACAAGTTATGACAGTCT+TGG 0.532790 3.3:+79807460 None:intergenic
TGGTGGTTGGCTAGATAAAG+TGG 0.532858 3.3:-79807720 MS.gene049281:CDS
TATGTTGCTGGTTTCACCAA+TGG 0.532862 3.3:-79808111 MS.gene049281:CDS
TCAACTGATTCGGAAGAAGA+AGG 0.533585 3.3:+79806757 None:intergenic
TTTCAGAAGTCTTTGAAGGA+AGG 0.534730 3.3:-79806904 MS.gene049281:CDS
GGAATAGGCAGTGAGATGTC+TGG 0.539588 3.3:-79808492 MS.gene049281:CDS
GGAGAAAATGGGACAGTGGA+TGG 0.540856 3.3:-79809199 MS.gene049281:CDS
GGATGTGGTGGGAACTTTGG+TGG 0.543291 3.3:-79809168 MS.gene049281:CDS
ACAACAATGGCACTACATCC+TGG 0.543434 3.3:-79808059 MS.gene049281:intron
AAGGAGAATTTCTAAAAGTG+AGG 0.545139 3.3:+79809074 None:intergenic
GTCACAGCTTCTAAGTTCCC+TGG 0.546660 3.3:-79807075 MS.gene049281:CDS
GAGTATAAGCAATATAAGAA+TGG 0.547167 3.3:-79808367 MS.gene049281:CDS
TGATTTGAGTTTGGCTGTGT+CGG 0.549396 3.3:-79806680 MS.gene049281:CDS
ACCATTACCATCTTATGGAA+GGG 0.550468 3.3:-79809535 MS.gene049281:CDS
AAGCAGACAACATACATCAA+TGG 0.554592 3.3:-79807201 MS.gene049281:CDS
CGATCATCCTGATGATGGGT+GGG 0.554648 3.3:-79808304 MS.gene049281:CDS
GTCTATGCCATCAGTATTTG+GGG 0.556587 3.3:+79808821 None:intergenic
CACGTGTGGAATTCTGCAGC+AGG 0.557062 3.3:-79808438 MS.gene049281:CDS
CCATTACCATCTTATGGAAG+GGG 0.557249 3.3:-79809534 MS.gene049281:CDS
AGCTCATGATTTCAAGACCA+TGG 0.559060 3.3:-79807148 MS.gene049281:CDS
TCCATTGGGAATATTAAGCT+GGG 0.563379 3.3:+79810127 None:intergenic
ATAAAATCTGATAATGGTAG+AGG 0.563384 3.3:-79808408 MS.gene049281:CDS
GCATTAAGAGATCCCAACCC+TGG 0.564662 3.3:+79806787 None:intergenic
CATGAGCTAATGTGTTAGAT+GGG 0.566650 3.3:+79807163 None:intergenic
CAGCATACGAATAAGCTTAG+CGG 0.568131 3.3:-79807268 MS.gene049281:CDS
ATTTCTTGATACACAAAACA+AGG 0.570126 3.3:-79806929 MS.gene049281:CDS
CCAACCACCAGGGCGAGCGA+GGG 0.571845 3.3:+79807733 None:intergenic
TGATGTGTTTGTGATCCCTA+AGG 0.571996 3.3:-79806881 MS.gene049281:CDS
ATGGGACAGTGGATGGTCAA+GGG 0.572603 3.3:-79809192 MS.gene049281:CDS
TTGTAGCCATCAAAAGTGGT+TGG 0.573048 3.3:-79808602 MS.gene049281:CDS
TAGTGAGATGATCTTTGTTG+AGG 0.576125 3.3:-79806971 MS.gene049281:CDS
GTGCCATTGTTGTGCAACTC+AGG 0.577905 3.3:+79808069 None:intergenic
GCTTTGCTGTTATACAAGCT+AGG 0.579292 3.3:+79807358 None:intergenic
TCCCAGCTTAATATTCCCAA+TGG 0.579499 3.3:-79810128 MS.gene049281:CDS
CTTAATGCCCCAAATACTGA+TGG 0.580516 3.3:-79808828 MS.gene049281:CDS
AATGGGACAGTGGATGGTCA+AGG 0.582086 3.3:-79809193 MS.gene049281:CDS
AAATCTGATAATGGTAGAGG+CGG 0.585487 3.3:-79808405 MS.gene049281:CDS
GATGTGTTTGTGATCCCTAA+GGG 0.586453 3.3:-79806880 MS.gene049281:CDS
ACTTTATCTAGCCAACCACC+AGG 0.587559 3.3:+79807722 None:intergenic
ACGATCATCCTGATGATGGG+TGG 0.594208 3.3:-79808305 MS.gene049281:CDS
CAAACGATCATCCTGATGAT+GGG 0.597556 3.3:-79808308 MS.gene049281:CDS
CGGAACGGGGAACACCCCAT+TGG 0.598203 3.3:+79808095 None:intergenic
TGTAGGAGAAAATGGGACAG+TGG 0.599461 3.3:-79809203 MS.gene049281:intron
ATACCAATTAGGTTTAGTAG+AGG 0.600312 3.3:-79808333 MS.gene049281:CDS
GAGATGATCTTTGTTGAGGA+AGG 0.605865 3.3:-79806967 MS.gene049281:CDS
TGGTCAAGGGAGGATGTGGT+GGG 0.615400 3.3:-79809179 MS.gene049281:CDS
GTAAAGGGTTCATCATTCGA+AGG 0.615474 3.3:-79808195 MS.gene049281:CDS
TGTCCTGAGTTGCACAACAA+TGG 0.616317 3.3:-79808072 MS.gene049281:CDS
GTGCAACTCAGGACACGGAA+CGG 0.616519 3.3:+79808080 None:intergenic
GATCTTGTAGCCATCAAAAG+TGG 0.619713 3.3:-79808606 MS.gene049281:CDS
ACTTTGGTGGAATAGAACAT+TGG 0.620201 3.3:-79809155 MS.gene049281:CDS
AGAACATTGGTGCACACAAG+AGG 0.623050 3.3:-79809142 MS.gene049281:CDS
CAAACCTGCAGTAAACAGGA+TGG 0.630227 3.3:+79809041 None:intergenic
ACCCCAACTTGCTCTGGAGT+AGG 0.630542 3.3:-79808513 MS.gene049281:CDS
AATCTGATAATGGTAGAGGC+GGG 0.630705 3.3:-79808404 MS.gene049281:CDS
TAGCTCTTGGATGATTATGG+AGG 0.631299 3.3:+79806992 None:intergenic
AATACTGATGGCATAGACCC+AGG 0.631728 3.3:-79808816 MS.gene049281:intron
TCCTACTCCAGAGCAAGTTG+GGG 0.634560 3.3:+79808512 None:intergenic
ATAGGCAGTGAGATGTCTGG+TGG 0.640393 3.3:-79808489 MS.gene049281:CDS
TAGCCTTATACATGCAAATG+GGG 0.642878 3.3:-79809484 MS.gene049281:CDS
GTTATCTTCAATACACACAT+TGG 0.643074 3.3:+79808647 None:intergenic
GGACAGTGGATGGTCAAGGG+AGG 0.650223 3.3:-79809189 MS.gene049281:CDS
TTGTTGTGCAACTCAGGACA+CGG 0.650767 3.3:+79808075 None:intergenic
TGTATAATAGCCAAAATCCA+GGG 0.650796 3.3:-79806804 MS.gene049281:CDS
TTGAGATACCAAGAGTGTTG+AGG 0.653794 3.3:+79807052 None:intergenic
GTGTAGCCTTATCTGCAACA+TGG 0.654245 3.3:-79808143 MS.gene049281:CDS
GCAACTCAGGACACGGAACG+GGG 0.659497 3.3:+79808082 None:intergenic
ATTTGTGCTAGGCTTAGCCA+CGG 0.669035 3.3:+79808563 None:intergenic
ACTGATTCGGAAGAAGAAGG+TGG 0.681202 3.3:+79806760 None:intergenic
CTTATGGAAGGGGAAGAGAG+AGG 0.704274 3.3:-79809524 MS.gene049281:CDS
CTTTATCTAGCCAACCACCA+GGG 0.707223 3.3:+79807723 None:intergenic
AGATAACTACATAGAAAGTG+GGG 0.715826 3.3:-79808631 MS.gene049281:CDS
TGTTGCTGGTTTCACCAATG+GGG 0.717763 3.3:-79808109 MS.gene049281:CDS
GGATCAATATGGAATCGCCG+TGG 0.731483 3.3:-79808580 MS.gene049281:CDS
TGCTGCTAAAGGCTACAGTG+AGG 0.746542 3.3:+79807286 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAATAAAA+TGG + chr3.3:79806804-79806823 None:intergenic 0.0%
!! AATAAAATAAAATAAAATGG+TGG + chr3.3:79806801-79806820 None:intergenic 10.0%
!! ATTAAAATATCTTTAAATCT+AGG + chr3.3:79808554-79808573 None:intergenic 10.0%
!! AACAAAAAAAACTAAATAAG+TGG + chr3.3:79807499-79807518 None:intergenic 15.0%
!!! ACAACAAATTTAATTTAATG+AGG + chr3.3:79807036-79807055 None:intergenic 15.0%
!! AAAAAAACTAAATAAGTGGT+TGG + chr3.3:79807495-79807514 None:intergenic 20.0%
!! AAAGTTAAACAAACATGATT+TGG + chr3.3:79807155-79807174 None:intergenic 20.0%
!! TGAAATCAATCAATTTCAAA+TGG + chr3.3:79809056-79809075 None:intergenic 20.0%
!! TGTATCTTTATTAAGAAAAG+TGG - chr3.3:79807062-79807081 MS.gene049281:CDS 20.0%
!! TTATTAAACCTCAAAGTTTA+TGG + chr3.3:79807913-79807932 None:intergenic 20.0%
!!! ATTTGAAATTGATTGATTTC+AGG - chr3.3:79809055-79809074 MS.gene049281:CDS 20.0%
!!! TAATGTTAATGATTTGAGTT+TGG - chr3.3:79810129-79810148 MS.gene049281:CDS 20.0%
!!! TGTTTGTTTAACTTTGTTTT+TGG - chr3.3:79807160-79807179 MS.gene049281:CDS 20.0%
!!! TTATTAATTCCACATTTTAC+AGG - chr3.3:79807235-79807254 MS.gene049281:CDS 20.0%
!!! TTTATTTTGTAGGAGAAAAT+GGG - chr3.3:79807608-79807627 MS.gene049281:intron 20.0%
!!! TTTTATTTTGTAGGAGAAAA+TGG - chr3.3:79807607-79807626 MS.gene049281:intron 20.0%
! AAAACCCAAAATTTGAATAC+AGG - chr3.3:79809226-79809245 MS.gene049281:intron 25.0%
! AAATGCATATGAGCAATATT+TGG + chr3.3:79807582-79807601 None:intergenic 25.0%
! AACAAACGCAATAAATAAAG+AGG + chr3.3:79808049-79808068 None:intergenic 25.0%
! AAGATAACTACATAGAAAGT+GGG - chr3.3:79808186-79808205 MS.gene049281:CDS 25.0%
! ACATGAAGAAAAATGAAGAA+TGG + chr3.3:79809511-79809530 None:intergenic 25.0%
! ACATTGACAAATAATCTGTT+CGG - chr3.3:79808998-79809017 MS.gene049281:intron 25.0%
! ATGGAAAACACAAAAATCAT+TGG + chr3.3:79809151-79809170 None:intergenic 25.0%
! ATTTCTTGATACACAAAACA+AGG - chr3.3:79809889-79809908 MS.gene049281:intron 25.0%
! CATGAAGAAAAATGAAGAAT+GGG + chr3.3:79809510-79809529 None:intergenic 25.0%
! GAGTATAAGCAATATAAGAA+TGG - chr3.3:79808451-79808470 MS.gene049281:CDS 25.0%
! TCAAGAAAATGATCTAGTTA+TGG + chr3.3:79809170-79809189 None:intergenic 25.0%
! TTAAAAATGAGCTGCAATAA+TGG - chr3.3:79808917-79808936 MS.gene049281:intron 25.0%
! TTCAAGAATATTACTCTTCT+TGG - chr3.3:79808653-79808672 MS.gene049281:CDS 25.0%
! TTGACTTCTTTAATTATGCA+TGG - chr3.3:79807098-79807117 MS.gene049281:CDS 25.0%
! TTGTAATTCCATAAACTTTG+AGG - chr3.3:79807902-79807921 MS.gene049281:intron 25.0%
!! GTTGCTAATTACTATACTTT+TGG - chr3.3:79807182-79807201 MS.gene049281:CDS 25.0%
!! TTTTACAGGACATTAAAGAA+TGG - chr3.3:79807249-79807268 MS.gene049281:CDS 25.0%
!!! AGATATTTTAATCAGCAATG+TGG - chr3.3:79808562-79808581 MS.gene049281:CDS 25.0%
!!! ATAAAATCTGATAATGGTAG+AGG - chr3.3:79808410-79808429 MS.gene049281:CDS 25.0%
!!! CTTTTAGAAATTCTCCTTTT+TGG - chr3.3:79807749-79807768 MS.gene049281:intron 25.0%
!!! TTAAACAAACATGATTTGGT+TGG + chr3.3:79807151-79807170 None:intergenic 25.0%
AATACAAGTTATGACAGTCT+TGG + chr3.3:79809361-79809380 None:intergenic 30.0%
AATCAGTTGAGAAGATAAAG+AGG - chr3.3:79810074-79810093 MS.gene049281:CDS 30.0%
AGATAACTACATAGAAAGTG+GGG - chr3.3:79808187-79808206 MS.gene049281:CDS 30.0%
ATACCAATTAGGTTTAGTAG+AGG - chr3.3:79808485-79808504 MS.gene049281:CDS 30.0%
ATTGAACCATTACCATCTTA+TGG - chr3.3:79807278-79807297 MS.gene049281:CDS 30.0%
CTAATGGAATTGCAATTAAG+TGG + chr3.3:79807406-79807425 None:intergenic 30.0%
CTAGCACAAATATCATAGTA+AGG - chr3.3:79808267-79808286 MS.gene049281:CDS 30.0%
CTTACTATGATATTTGTGCT+AGG + chr3.3:79808269-79808288 None:intergenic 30.0%
CTTTAATGTCCTGTAAAATG+TGG + chr3.3:79807247-79807266 None:intergenic 30.0%
CTTTATCTTCTCAACTGATT+CGG + chr3.3:79810074-79810093 None:intergenic 30.0%
GAAGATAACTACATAGAAAG+TGG - chr3.3:79808185-79808204 MS.gene049281:CDS 30.0%
GTTATCTTCAATACACACAT+TGG + chr3.3:79808174-79808193 None:intergenic 30.0%
GTTCGCATAAAATCTGATAA+TGG - chr3.3:79808404-79808423 MS.gene049281:CDS 30.0%
TACCTGTAATGACAACATTA+CGG + chr3.3:79807361-79807380 None:intergenic 30.0%
TATCAAGAATGTGCAGTAAA+AGG + chr3.3:79807804-79807823 None:intergenic 30.0%
TGACTATTGAATGATGTAAC+AGG + chr3.3:79809416-79809435 None:intergenic 30.0%
TGTATAATAGCCAAAATCCA+GGG - chr3.3:79810014-79810033 MS.gene049281:intron 30.0%
TTAATATTCCCAATGGAACT+TGG - chr3.3:79806697-79806716 MS.gene049281:CDS 30.0%
TTCCATTTCTTTCTAAATCG+TGG - chr3.3:79809965-79809984 MS.gene049281:intron 30.0%
TTGATCATTACTGTCTTTAG+TGG - chr3.3:79806951-79806970 MS.gene049281:CDS 30.0%
TTGTCTAATTGCAGTACTAA+TGG + chr3.3:79807422-79807441 None:intergenic 30.0%
! AAGGAGAATTTCTAAAAGTG+AGG + chr3.3:79807747-79807766 None:intergenic 30.0%
! CTCTCCTGTATTCAAATTTT+GGG + chr3.3:79809233-79809252 None:intergenic 30.0%
! GGTAAATATACCATTTTGCT+AGG + chr3.3:79809442-79809461 None:intergenic 30.0%
! TCTCTCCTGTATTCAAATTT+TGG + chr3.3:79809234-79809253 None:intergenic 30.0%
! TTAAATCTAGGAACAGCTTT+TGG + chr3.3:79808542-79808561 None:intergenic 30.0%
!! AGTGAATGACTACTTTTCAA+GGG - chr3.3:79807464-79807483 MS.gene049281:CDS 30.0%
!! ATTAGCCTTATACATGCAAA+TGG - chr3.3:79807332-79807351 MS.gene049281:CDS 30.0%
!! GATGGTAATGGTTCAATAAT+AGG + chr3.3:79807275-79807294 None:intergenic 30.0%
!! TAGTGAATGACTACTTTTCA+AGG - chr3.3:79807463-79807482 MS.gene049281:CDS 30.0%
!! TTAGCCTTATACATGCAAAT+GGG - chr3.3:79807333-79807352 MS.gene049281:CDS 30.0%
!!! AGTTGTACCTTAGTTTTAGA+GGG - chr3.3:79809121-79809140 MS.gene049281:CDS 30.0%
!!! TATGTTGTCTGCTTTTTTGA+TGG + chr3.3:79809611-79809630 None:intergenic 30.0%
!!! TGTATAGACAGTTTTTTCAC+CGG - chr3.3:79809200-79809219 MS.gene049281:CDS 30.0%
AAAAGTGGTTGGGATCAATA+TGG - chr3.3:79808227-79808246 MS.gene049281:CDS 35.0%
AACACTCTTGGTATCTCAAT+TGG - chr3.3:79809770-79809789 MS.gene049281:intron 35.0%
AACCATTACCATCTTATGGA+AGG - chr3.3:79807282-79807301 MS.gene049281:CDS 35.0%
AAGCAGACAACATACATCAA+TGG - chr3.3:79809617-79809636 MS.gene049281:intron 35.0%
ACCATTACCATCTTATGGAA+GGG - chr3.3:79807283-79807302 MS.gene049281:CDS 35.0%
ACTTTGGTGGAATAGAACAT+TGG - chr3.3:79807663-79807682 MS.gene049281:intron 35.0%
AGAACAGACATTGAAGTTGA+TGG - chr3.3:79809794-79809813 MS.gene049281:intron 35.0%
AGAGAGTGAAGATACCAATT+AGG - chr3.3:79808474-79808493 MS.gene049281:CDS 35.0%
ATAAGTGCAAAGTACAAACC+TGG + chr3.3:79808023-79808042 None:intergenic 35.0%
ATAGTCAAGACCTAGCAAAA+TGG - chr3.3:79809429-79809448 MS.gene049281:intron 35.0%
ATCATAGTAAGGAGAGTTTC+AGG - chr3.3:79808278-79808297 MS.gene049281:CDS 35.0%
CACCACGATTTAGAAAGAAA+TGG + chr3.3:79809970-79809989 None:intergenic 35.0%
CATGAGCTAATGTGTTAGAT+GGG + chr3.3:79809658-79809677 None:intergenic 35.0%
CCTCGATAAATTCAACTTGA+AGG + chr3.3:79807834-79807853 None:intergenic 35.0%
GAACCTCTACTAAACCTAAT+TGG + chr3.3:79808491-79808510 None:intergenic 35.0%
GATTTACTATGTGTGGATCA+TGG - chr3.3:79808795-79808814 MS.gene049281:intron 35.0%
GTGTATAATAGCCAAAATCC+AGG - chr3.3:79810013-79810032 MS.gene049281:intron 35.0%
TAAGTGCAAAGTACAAACCT+GGG + chr3.3:79808022-79808041 None:intergenic 35.0%
TAGTGAGATGATCTTTGTTG+AGG - chr3.3:79809847-79809866 MS.gene049281:intron 35.0%
TCAGTAATGTCGTGATCAAA+GGG - chr3.3:79807949-79807968 MS.gene049281:intron 35.0%
TCATGAGCTAATGTGTTAGA+TGG + chr3.3:79809659-79809678 None:intergenic 35.0%
TCCATTGGGAATATTAAGCT+GGG + chr3.3:79806694-79806713 None:intergenic 35.0%
TTATTTGTCAATGTCACCGT+AGG + chr3.3:79808992-79809011 None:intergenic 35.0%
TTCAGTAATGTCGTGATCAA+AGG - chr3.3:79807948-79807967 MS.gene049281:intron 35.0%
TTCCATTGGGAATATTAAGC+TGG + chr3.3:79806695-79806714 None:intergenic 35.0%
TTTCTGAGTTCATGAGTTCA+AGG + chr3.3:79807708-79807727 None:intergenic 35.0%
! AAGAAAAAGCGTGAAATCAC+TGG + chr3.3:79806745-79806764 None:intergenic 35.0%
! GAACAGACATTGAAGTTGAT+GGG - chr3.3:79809795-79809814 MS.gene049281:intron 35.0%
! TCTTTGCTGATGAGTGTTTT+GGG + chr3.3:79809393-79809412 None:intergenic 35.0%
! TTCAACAAAAGCTCCAGTTT+TGG - chr3.3:79808595-79808614 MS.gene049281:CDS 35.0%
! TTCGGTTTGAGATTTGTGAT+TGG - chr3.3:79809016-79809035 MS.gene049281:intron 35.0%
! TTTCAGAAGTCTTTGAAGGA+AGG - chr3.3:79809914-79809933 MS.gene049281:intron 35.0%
!! AAATCTGATAATGGTAGAGG+CGG - chr3.3:79808413-79808432 MS.gene049281:CDS 35.0%
!! AATGAGCTGCAATAATGGAT+TGG - chr3.3:79808922-79808941 MS.gene049281:intron 35.0%
!! ATGAGCTGCAATAATGGATT+GGG - chr3.3:79808923-79808942 MS.gene049281:intron 35.0%
!! CAAACATGATTTGGTTGGTT+TGG + chr3.3:79807146-79807165 None:intergenic 35.0%
!! CCTTCAAGTTGAATTTATCG+AGG - chr3.3:79807831-79807850 MS.gene049281:intron 35.0%
!! GGTTTTTCAGAAGTCTTTGA+AGG - chr3.3:79809910-79809929 MS.gene049281:intron 35.0%
!! TAGCCTTATACATGCAAATG+GGG - chr3.3:79807334-79807353 MS.gene049281:CDS 35.0%
!!! GAGTTGTACCTTAGTTTTAG+AGG - chr3.3:79809120-79809139 MS.gene049281:CDS 35.0%
!!! GTATAGACAGTTTTTTCACC+GGG - chr3.3:79809201-79809220 MS.gene049281:CDS 35.0%
!!! GTTGTACCTTAGTTTTAGAG+GGG - chr3.3:79809122-79809141 MS.gene049281:CDS 35.0%
!!! TCAAATTTTGGGTTTTCTCC+CGG + chr3.3:79809222-79809241 None:intergenic 35.0%
!!! TGCTTTTTTGATGGAGATGT+GGG + chr3.3:79809602-79809621 None:intergenic 35.0%
!!! TTCACGCTTTTTCTTCATCA+TGG - chr3.3:79806750-79806769 MS.gene049281:CDS 35.0%
AAGAAATGGAACAAGCCCTT+AGG + chr3.3:79809956-79809975 None:intergenic 40.0%
AATAGCCAAAATCCAGGGTT+GGG - chr3.3:79810019-79810038 MS.gene049281:intron 40.0%
ACAATGCCATGTTGCAGATA+AGG + chr3.3:79808684-79808703 None:intergenic 40.0%
ACAGGATGGATAGTCCAAAA+AGG + chr3.3:79807766-79807785 None:intergenic 40.0%
ACCATGGAATTAAGCAAAGC+AGG - chr3.3:79809686-79809705 MS.gene049281:intron 40.0%
ACCTGCTTTGCTTAATTCCA+TGG + chr3.3:79809690-79809709 None:intergenic 40.0%
AGAAATGGAACAAGCCCTTA+GGG + chr3.3:79809955-79809974 None:intergenic 40.0%
AGCTCATGATTTCAAGACCA+TGG - chr3.3:79809670-79809689 MS.gene049281:intron 40.0%
ATCTCGCGTCAGATAAATTC+AGG + chr3.3:79808958-79808977 None:intergenic 40.0%
ATGCTGAAAACCAGATCAGT+TGG - chr3.3:79808837-79808856 MS.gene049281:CDS 40.0%
CAAACGATCATCCTGATGAT+GGG - chr3.3:79808510-79808529 MS.gene049281:CDS 40.0%
CAATTGAGAATTTGCACGTG+TGG - chr3.3:79808366-79808385 MS.gene049281:CDS 40.0%
CAGCATACGAATAAGCTTAG+CGG - chr3.3:79809550-79809569 MS.gene049281:CDS 40.0%
CCACACATAGTAAATCAGCA+AGG + chr3.3:79808791-79808810 None:intergenic 40.0%
CCATTACCATCTTATGGAAG+GGG - chr3.3:79807284-79807303 MS.gene049281:CDS 40.0%
CTTAATGCCCCAAATACTGA+TGG - chr3.3:79807990-79808009 MS.gene049281:intron 40.0%
GAAAACTGCTCGCTCAATAT+GGG + chr3.3:79808863-79808882 None:intergenic 40.0%
GAGATGATCTTTGTTGAGGA+AGG - chr3.3:79809851-79809870 MS.gene049281:intron 40.0%
GATCAAAGGGATGACAATCT+TGG - chr3.3:79807962-79807981 MS.gene049281:intron 40.0%
GATCTTGTAGCCATCAAAAG+TGG - chr3.3:79808212-79808231 MS.gene049281:CDS 40.0%
GATGTGTTTGTGATCCCTAA+GGG - chr3.3:79809938-79809957 MS.gene049281:intron 40.0%
GATTTGTGATTGGAACGTGT+AGG - chr3.3:79809026-79809045 MS.gene049281:intron 40.0%
GCAAAATAATTCGCTTGAGC+AGG + chr3.3:79808891-79808910 None:intergenic 40.0%
GCAGGTTCAATAGATGATTC+TGG - chr3.3:79809704-79809723 MS.gene049281:intron 40.0%
GCTTATTCGTATGCTGCTAA+AGG + chr3.3:79809546-79809565 None:intergenic 40.0%
GGTCTATGCCATCAGTATTT+GGG + chr3.3:79808001-79808020 None:intergenic 40.0%
GTAAAGGGTTCATCATTCGA+AGG - chr3.3:79808623-79808642 MS.gene049281:CDS 40.0%
GTCCGTAATGTTGTCATTAC+AGG - chr3.3:79807356-79807375 MS.gene049281:CDS 40.0%
GTCTATGCCATCAGTATTTG+GGG + chr3.3:79808000-79808019 None:intergenic 40.0%
TAATAGCCAAAATCCAGGGT+TGG - chr3.3:79810018-79810037 MS.gene049281:intron 40.0%
TACTATGTGTGGATCATGGA+TGG - chr3.3:79808799-79808818 MS.gene049281:intron 40.0%
TAGCTCTTGGATGATTATGG+AGG + chr3.3:79809829-79809848 None:intergenic 40.0%
TCAAACGATCATCCTGATGA+TGG - chr3.3:79808509-79808528 MS.gene049281:CDS 40.0%
TCCCAGCTTAATATTCCCAA+TGG - chr3.3:79806690-79806709 MS.gene049281:CDS 40.0%
TCGAGTCTGAATCATGAGAA+AGG + chr3.3:79808148-79808167 None:intergenic 40.0%
TGATGTGTTTGTGATCCCTA+AGG - chr3.3:79809937-79809956 MS.gene049281:intron 40.0%
TGGCATTGTGAATATGTTGC+TGG - chr3.3:79808695-79808714 MS.gene049281:intron 40.0%
TGTAGCCATCAAAAGTGGTT+GGG - chr3.3:79808217-79808236 MS.gene049281:CDS 40.0%
TTGTAGCCATCAAAAGTGGT+TGG - chr3.3:79808216-79808235 MS.gene049281:CDS 40.0%
! AAGATCATCTCACTAGCTCT+TGG + chr3.3:79809842-79809861 None:intergenic 40.0%
! CACTAGCTCTTGGATGATTA+TGG + chr3.3:79809832-79809851 None:intergenic 40.0%
! CTTTGCTGATGAGTGTTTTG+GGG + chr3.3:79809392-79809411 None:intergenic 40.0%
! CTTTGTTGAGGAAGGTGTAT+TGG - chr3.3:79809859-79809878 MS.gene049281:intron 40.0%
! GTCTTTGCTGATGAGTGTTT+TGG + chr3.3:79809394-79809413 None:intergenic 40.0%
! TCAGTATTTGGGGCATTAAG+AGG + chr3.3:79807990-79808009 None:intergenic 40.0%
! TGATTTGAGTTTGGCTGTGT+CGG - chr3.3:79810138-79810157 MS.gene049281:CDS 40.0%
!! AACGTTTTCAAGGCAAAGGT+GGG - chr3.3:79806667-79806686 MS.gene049281:CDS 40.0%
!! AATCTGATAATGGTAGAGGC+GGG - chr3.3:79808414-79808433 MS.gene049281:CDS 40.0%
!! ACATGATTTGGTTGGTTTGG+TGG + chr3.3:79807143-79807162 None:intergenic 40.0%
!! ATGCAACGTTTTCAAGGCAA+AGG - chr3.3:79806663-79806682 MS.gene049281:CDS 40.0%
!! ATGTTGCTGGTTTCACCAAT+GGG - chr3.3:79808708-79808727 MS.gene049281:intron 40.0%
!! CATGATTTGGTTGGTTTGGT+GGG + chr3.3:79807142-79807161 None:intergenic 40.0%
!! CCTTGCTGATTTACTATGTG+TGG - chr3.3:79808788-79808807 MS.gene049281:intron 40.0%
!! GCTTTGCTGTTATACAAGCT+AGG + chr3.3:79809463-79809482 None:intergenic 40.0%
!! TATGTTGCTGGTTTCACCAA+TGG - chr3.3:79808707-79808726 MS.gene049281:intron 40.0%
!! TCAACTGATTCGGAAGAAGA+AGG + chr3.3:79810064-79810083 None:intergenic 40.0%
!! TGGTTACCCCTCTAAAACTA+AGG + chr3.3:79809131-79809150 None:intergenic 40.0%
!! TTGAGATACCAAGAGTGTTG+AGG + chr3.3:79809769-79809788 None:intergenic 40.0%
!! TTGATCCCAACCACTTTTGA+TGG + chr3.3:79808225-79808244 None:intergenic 40.0%
!!! ACAAAAGCTCCAGTTTTGGA+AGG - chr3.3:79808599-79808618 MS.gene049281:CDS 40.0%
!!! CATCATGGTGCTGTTCTTTT+AGG - chr3.3:79806765-79806784 MS.gene049281:CDS 40.0%
!!! CCAGTTTTGGAAGGTGTAAA+GGG - chr3.3:79808608-79808627 MS.gene049281:CDS 40.0%
!!! CTGCTTTTTTGATGGAGATG+TGG + chr3.3:79809603-79809622 None:intergenic 40.0%
!!! GCTTTTTTGATGGAGATGTG+GGG + chr3.3:79809601-79809620 None:intergenic 40.0%
!!! TCCAGTTTTGGAAGGTGTAA+AGG - chr3.3:79808607-79808626 MS.gene049281:CDS 40.0%
!!! TGCTGTTCTTTTAGGTTCTC+AGG - chr3.3:79806773-79806792 MS.gene049281:CDS 40.0%
AAATCAGCAAGGTCAACACC+AGG + chr3.3:79808780-79808799 None:intergenic 45.0%
AATACTGATGGCATAGACCC+AGG - chr3.3:79808002-79808021 MS.gene049281:intron 45.0%
ACAACAATGGCACTACATCC+TGG - chr3.3:79808759-79808778 MS.gene049281:intron 45.0%
ACATGCAAAACCCAGATTGC+AGG + chr3.3:79806927-79806946 None:intergenic 45.0%
ACCAGTAAGCCAAGTTCCAT+TGG + chr3.3:79806709-79806728 None:intergenic 45.0%
ACTTTATCTAGCCAACCACC+AGG + chr3.3:79809099-79809118 None:intergenic 45.0%
AGAACATTGGTGCACACAAG+AGG - chr3.3:79807676-79807695 MS.gene049281:intron 45.0%
AGGACAAACCTGCAGTAAAC+AGG + chr3.3:79807784-79807803 None:intergenic 45.0%
ATTCCTACTCCAGAGCAAGT+TGG + chr3.3:79808311-79808330 None:intergenic 45.0%
ATTTGTGCTAGGCTTAGCCA+CGG + chr3.3:79808258-79808277 None:intergenic 45.0%
CAAACCTGCAGTAAACAGGA+TGG + chr3.3:79807780-79807799 None:intergenic 45.0%
CCAGTAAGCCAAGTTCCATT+GGG + chr3.3:79806708-79806727 None:intergenic 45.0%
CCCCTTCCATAAGATGGTAA+TGG + chr3.3:79807287-79807306 None:intergenic 45.0%
CCCTTTACACCTTCCAAAAC+TGG + chr3.3:79808611-79808630 None:intergenic 45.0%
CTATCCATCCTGTTTACTGC+AGG - chr3.3:79807773-79807792 MS.gene049281:intron 45.0%
CTTTATCTAGCCAACCACCA+GGG + chr3.3:79809098-79809117 None:intergenic 45.0%
GAGATCTTCCTTTCTGCCTA+CGG - chr3.3:79808973-79808992 MS.gene049281:intron 45.0%
GGAAAACTGCTCGCTCAATA+TGG + chr3.3:79808864-79808883 None:intergenic 45.0%
GGACCCCATTTGCATGTATA+AGG + chr3.3:79807340-79807359 None:intergenic 45.0%
GGGTCTATGCCATCAGTATT+TGG + chr3.3:79808002-79808021 None:intergenic 45.0%
TAATTCGCTTGAGCAGGACT+CGG + chr3.3:79808885-79808904 None:intergenic 45.0%
TCAATATGGGCCAACTGATC+TGG + chr3.3:79808850-79808869 None:intergenic 45.0%
TCTCTTCCCCTTCCATAAGA+TGG + chr3.3:79807293-79807312 None:intergenic 45.0%
TGCATGGTTGTGCAATCACA+TGG - chr3.3:79807114-79807133 MS.gene049281:CDS 45.0%
TGTAGGAGAAAATGGGACAG+TGG - chr3.3:79807615-79807634 MS.gene049281:intron 45.0%
TGTCCTGAGTTGCACAACAA+TGG - chr3.3:79808746-79808765 MS.gene049281:intron 45.0%
TTCCTACTCCAGAGCAAGTT+GGG + chr3.3:79808310-79808329 None:intergenic 45.0%
TTGTTGTGCAACTCAGGACA+CGG + chr3.3:79808746-79808765 None:intergenic 45.0%
! TGGTGGTTGGCTAGATAAAG+TGG - chr3.3:79809098-79809117 MS.gene049281:CDS 45.0%
!! ACTGATTCGGAAGAAGAAGG+TGG + chr3.3:79810061-79810080 None:intergenic 45.0%
!! ACTTGCTCTGGAGTAGGAAT+AGG - chr3.3:79808311-79808330 MS.gene049281:CDS 45.0%
!! CAACGTTTTCAAGGCAAAGG+TGG - chr3.3:79806666-79806685 MS.gene049281:CDS 45.0%
!! GTGTAGCCTTATCTGCAACA+TGG - chr3.3:79808675-79808694 MS.gene049281:intron 45.0%
!! TGTTGCTGGTTTCACCAATG+GGG - chr3.3:79808709-79808728 MS.gene049281:intron 45.0%
!!! GATCTGGTTTTCAGCATAGC+TGG + chr3.3:79808834-79808853 None:intergenic 45.0%
!! ATATAATTAATTAACTTATT+TGG - chr3.3:79807523-79807542 MS.gene049281:intron 5.0%
!! TAATATAATTAAAATTCAAA+AGG + chr3.3:79806839-79806858 None:intergenic 5.0%
!!! ATTTTATTATTTTATTTTGT+AGG - chr3.3:79807598-79807617 MS.gene049281:intron 5.0%
AATGGGACAGTGGATGGTCA+AGG - chr3.3:79807625-79807644 MS.gene049281:intron 50.0%
ACAGTCTTGGAGTTCACTGC+TGG + chr3.3:79809348-79809367 None:intergenic 50.0%
AGACTTTCCGCCTGCAATCT+GGG - chr3.3:79806914-79806933 MS.gene049281:CDS 50.0%
ATAGGCAGTGAGATGTCTGG+TGG - chr3.3:79808329-79808348 MS.gene049281:CDS 50.0%
ATGGGACAGTGGATGGTCAA+GGG - chr3.3:79807626-79807645 MS.gene049281:intron 50.0%
CAATGTCACCGTAGGCAGAA+AGG + chr3.3:79808984-79809003 None:intergenic 50.0%
CCCAATGGAACTTGGCTTAC+TGG - chr3.3:79806705-79806724 MS.gene049281:CDS 50.0%
CTTATGGAAGGGGAAGAGAG+AGG - chr3.3:79807294-79807313 MS.gene049281:CDS 50.0%
GCATTAAGAGATCCCAACCC+TGG + chr3.3:79810034-79810053 None:intergenic 50.0%
GGAATAGGCAGTGAGATGTC+TGG - chr3.3:79808326-79808345 MS.gene049281:CDS 50.0%
GGAGAAAATGGGACAGTGGA+TGG - chr3.3:79807619-79807638 MS.gene049281:intron 50.0%
GGATCAATATGGAATCGCCG+TGG - chr3.3:79808238-79808257 MS.gene049281:CDS 50.0%
GTCACAGCTTCTAAGTTCCC+TGG - chr3.3:79809743-79809762 MS.gene049281:intron 50.0%
TAGACTTTCCGCCTGCAATC+TGG - chr3.3:79806913-79806932 MS.gene049281:CDS 50.0%
TCCTACTCCAGAGCAAGTTG+GGG + chr3.3:79808309-79808328 None:intergenic 50.0%
TGCAAAACCCAGATTGCAGG+CGG + chr3.3:79806924-79806943 None:intergenic 50.0%
TGCTGCTAAAGGCTACAGTG+AGG + chr3.3:79809535-79809554 None:intergenic 50.0%
TTTGGATCCCACCCATCATC+AGG + chr3.3:79808524-79808543 None:intergenic 50.0%
! GAGATCCCAACCCTGGATTT+TGG + chr3.3:79810027-79810046 None:intergenic 50.0%
! GAGGAAGGTGTATTGGAAGC+TGG - chr3.3:79809866-79809885 MS.gene049281:intron 50.0%
! GTGCCATTGTTGTGCAACTC+AGG + chr3.3:79808752-79808771 None:intergenic 50.0%
!! ACGATCATCCTGATGATGGG+TGG - chr3.3:79808513-79808532 MS.gene049281:CDS 50.0%
!! AGCGGACTGTGCTAATCTAC+AGG - chr3.3:79809568-79809587 MS.gene049281:intron 50.0%
!! AGTTCACTGCTGGCTTTGCT+AGG + chr3.3:79809338-79809357 None:intergenic 50.0%
!! ATACCAAGAGTGTTGAGGCC+AGG + chr3.3:79809764-79809783 None:intergenic 50.0%
!! CGATCATCCTGATGATGGGT+GGG - chr3.3:79808514-79808533 MS.gene049281:CDS 50.0%
!! TACCAAGAGTGTTGAGGCCA+GGG + chr3.3:79809763-79809782 None:intergenic 50.0%
AGGGGAAGAGAGAGGTTAGG+AGG - chr3.3:79807302-79807321 MS.gene049281:CDS 55.0%
ATGGTCAAGGGAGGATGTGG+TGG - chr3.3:79807638-79807657 MS.gene049281:intron 55.0%
CACGTGTGGAATTCTGCAGC+AGG - chr3.3:79808380-79808399 MS.gene049281:CDS 55.0%
GGAAGGGGAAGAGAGAGGTT+AGG - chr3.3:79807299-79807318 MS.gene049281:CDS 55.0%
GTGCAACTCAGGACACGGAA+CGG + chr3.3:79808741-79808760 None:intergenic 55.0%
TGCAACTCAGGACACGGAAC+GGG + chr3.3:79808740-79808759 None:intergenic 55.0%
TGGATGGTCAAGGGAGGATG+TGG - chr3.3:79807635-79807654 MS.gene049281:intron 55.0%
TGGTCAAGGGAGGATGTGGT+GGG - chr3.3:79807639-79807658 MS.gene049281:intron 55.0%
TTCCCTGGCCTCAACACTCT+TGG - chr3.3:79809758-79809777 MS.gene049281:intron 55.0%
! GGAACTACCCCAACTTGCTC+TGG - chr3.3:79808299-79808318 MS.gene049281:CDS 55.0%
! GGAGGATGTGGTGGGAACTT+TGG - chr3.3:79807647-79807666 MS.gene049281:intron 55.0%
! GGATGTGGTGGGAACTTTGG+TGG - chr3.3:79807650-79807669 MS.gene049281:intron 55.0%
!! ACCCCAACTTGCTCTGGAGT+AGG - chr3.3:79808305-79808324 MS.gene049281:CDS 55.0%
GCAACTCAGGACACGGAACG+GGG + chr3.3:79808739-79808758 None:intergenic 60.0%
GGACAGTGGATGGTCAAGGG+AGG - chr3.3:79807629-79807648 MS.gene049281:intron 60.0%
CGGAACGGGGAACACCCCAT+TGG + chr3.3:79808726-79808745 None:intergenic 65.0%
TCATTCTCCCTCGCTCGCCC+TGG - chr3.3:79809078-79809097 MS.gene049281:CDS 65.0%
CCAACCACCAGGGCGAGCGA+GGG + chr3.3:79809088-79809107 None:intergenic 70.0%
TTCTCCCTCGCTCGCCCTGG+TGG - chr3.3:79809081-79809100 MS.gene049281:CDS 70.0%
CCCTCGCTCGCCCTGGTGGT+TGG - chr3.3:79809085-79809104 MS.gene049281:CDS 75.0%
GCCAACCACCAGGGCGAGCG+AGG + chr3.3:79809089-79809108 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 79806663 79810177 79806663 ID=MS.gene049281
chr3.3 mRNA 79806663 79810177 79806663 ID=MS.gene049281.t1;Parent=MS.gene049281
chr3.3 exon 79810046 79810177 79810046 ID=MS.gene049281.t1.exon1;Parent=MS.gene049281.t1
chr3.3 CDS 79810046 79810177 79810046 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79809463 79809583 79809463 ID=MS.gene049281.t1.exon2;Parent=MS.gene049281.t1
chr3.3 CDS 79809463 79809583 79809463 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79809046 79809220 79809046 ID=MS.gene049281.t1.exon3;Parent=MS.gene049281.t1
chr3.3 CDS 79809046 79809220 79809046 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79808817 79808887 79808817 ID=MS.gene049281.t1.exon4;Parent=MS.gene049281.t1
chr3.3 CDS 79808817 79808887 79808817 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79808060 79808678 79808060 ID=MS.gene049281.t1.exon5;Parent=MS.gene049281.t1
chr3.3 CDS 79808060 79808678 79808060 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79807716 79807763 79807716 ID=MS.gene049281.t1.exon6;Parent=MS.gene049281.t1
chr3.3 CDS 79807716 79807763 79807716 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
chr3.3 exon 79806663 79807515 79806663 ID=MS.gene049281.t1.exon7;Parent=MS.gene049281.t1
chr3.3 CDS 79806663 79807515 79806663 ID=cds.MS.gene049281.t1;Parent=MS.gene049281.t1
Gene Sequence

>MS.gene049281

ATGCAACGTTTTCAAGGCAAAGGTGGGTCCCAGCTTAATATTCCCAATGGAACTTGGCTTACTGGTAGTTTTAATCTCACCAGTGATTTCACGCTTTTTCTTCATCATGGTGCTGTTCTTTTAGGTTCTCAGGTACCACCATTTTATTTTATTTTATTTTATTTCTATTTTCACCTTTTGAATTTTAATTATATTATTATACGTTGCTAACAATATATTATTATTGTTACGTTTTCATGTGAAAATTAATTAGACTTTCCGCCTGCAATCTGGGTTTTGCATGTGATTTTGATCATTACTGTCTTTAGTGGCAAACAAGTTGAAATAAATTAAGTTATTTTTAAAGTTTTTTCTTCTTCTTCTTCTTATTCCTCATTAAATTAAATTTGTTGTTTTCTGTGTATCTTTATTAAGAAAAGTGGTGAGATGTTGCTTTTGACTTCTTTAATTATGCATGGTTGTGCAATCACATGGAACCCACCAAACCAACCAAATCATGTTTGTTTAACTTTGTTTTTGGTTGCTAATTACTATACTTTTGGAAATTTGATGAAAATGTGATTATTATATTTTTATTAATTCCACATTTTACAGGACATTAAAGAATGGCCTATTATTGAACCATTACCATCTTATGGAAGGGGAAGAGAGAGGTTAGGAGGAAGACATATTAGCCTTATACATGCAAATGGGGTCCGTAATGTTGTCATTACAGGTAAACAAAAAATAAGTACTTTTTTCCACTTAATTGCAATTCCATTAGTACTGCAATTAGACAAAAAAGTAACTAATGTAGTGACTAGTGAATGACTACTTTTCAAGGGAAAATCCAACCACTTATTTAGTTTTTTTTGTTGTTGATATAATTAATTAACTTATTTGGTTAAAGTTTGTAAAAATCTGTACAGTATATAGTCCAAATATTGCTCATATGCATTTTATTATTTTATTTTGTAGGAGAAAATGGGACAGTGGATGGTCAAGGGAGGATGTGGTGGGAACTTTGGTGGAATAGAACATTGGTGCACACAAGAGGACATCTCCTTGAACTCATGAACTCAGAAAATGTTCTTGTTTCAAACCTCACTTTTAGAAATTCTCCTTTTTGGACTATCCATCCTGTTTACTGCAGGTTTGTCCTTTTACTGCACATTCTTGATAGTTTTGTCCTTCAAGTTGAATTTATCGAGGAAACTTTTTAGTGTTATATCATGCATATGTATTGTACGTTGCTAGCATTTGTAATTCCATAAACTTTGAGGTTTAATAAAATGCTGTGTTTTGATTCAGTAATGTCGTGATCAAAGGGATGACAATCTTGGCTCCTCTTAATGCCCCAAATACTGATGGCATAGACCCAGGTTTGTACTTTGCACTTATTTACCTCTTTATTTATTGCGTTTGTTTGTTTCTTTGTTATGCTCAAATTCAAGTGAACAAATGTTAATGCAAATTGTTTTATAGTCTCTTACAAGTGAATTTCCTTTCTCATGATTCAGACTCGAGTACCAATGTGTGTATTGAAGATAACTACATAGAAAGTGGGGACGATCTTGTAGCCATCAAAAGTGGTTGGGATCAATATGGAATCGCCGTGGCTAAGCCTAGCACAAATATCATAGTAAGGAGAGTTTCAGGAACTACCCCAACTTGCTCTGGAGTAGGAATAGGCAGTGAGATGTCTGGTGGAATTTCAAATATTACAATTGAGAATTTGCACGTGTGGAATTCTGCAGCAGGTGTTCGCATAAAATCTGATAATGGTAGAGGCGGGTATGTAGCAAATGTGAGTATAAGCAATATAAGAATGGAGAGAGTGAAGATACCAATTAGGTTTAGTAGAGGTTCAAACGATCATCCTGATGATGGGTGGGATCCAAAAGCTGTTCCTAGATTTAAAGATATTTTAATCAGCAATGTGGTCAGTGTAAATTCAACAAAAGCTCCAGTTTTGGAAGGTGTAAAGGGTTCATCATTCGAAGGCTTATGCTTCAAGAATATTACTCTTCTTGGTGTAGCCTTATCTGCAACATGGCATTGTGAATATGTTGCTGGTTTCACCAATGGGGTGTTCCCCGTTCCGTGTCCTGAGTTGCACAACAATGGCACTACATCCTGGTGTTGACCTTGCTGATTTACTATGTGTGGATCATGGATGGTTCTAAATTCCAGCTATGCTGAAAACCAGATCAGTTGGCCCATATTGAGCGAGCAGTTTTCCGAGTCCTGCTCAAGCGAATTATTTTGCTACGCGTTAAAAATGAGCTGCAATAATGGATTGGGCTTGTGAAGCCTGAATTTATCTGACGCGAGATCTTCCTTTCTGCCTACGGTGACATTGACAAATAATCTGTTCGGTTTGAGATTTGTGATTGGAACGTGTAGGAGTACCATTTGAAATTGATTGATTTCAGGTCATTCTCCCTCGCTCGCCCTGGTGGTTGGCTAGATAAAGTGGAGTTGTACCTTAGTTTTAGAGGGGTAACCAATGATTTTTGTGTTTTCCATAACTAGATCATTTTCTTGAACATTAATGTTGTATAGACAGTTTTTTCACCGGGAGAAAACCCAAAATTTGAATACAGGAGAGACAATTTTGATTCAGCTTCAAATACTGAAAATTTCATTTAAAAATTAATTTATTTAATGTTTTTCTTTAAAGCAATGTACTTCCTAGCAAAGCCAGCAGTGAACTCCAAGACTGTCATAACTTGTATTTCTTGCAACCCCAAAACACTCATCAGCAAAGACCTGTTACATCATTCAATAGTCAAGACCTAGCAAAATGGTATATTTACCTAGCTTGTATAACAGCAAAGCTGAGAATCAAGATGAAGATGAAATCCCATTCTTCATTTTTCTTCATGTTCCTCACTGTAGCCTTTAGCAGCATACGAATAAGCTTAGCGGACTGTGCTAATCTACAGGACACATGCCCCACATCTCCATCAAAAAAGCAGACAACATACATCAATGGCTTCTCTTGCAATAACCCATCTAACACATTAGCTCATGATTTCAAGACCATGGAATTAAGCAAAGCAGGTTCAATAGATGATTCTGGTTCATCAATCAACATCGTCACAGCTTCTAAGTTCCCTGGCCTCAACACTCTTGGTATCTCAATTGGCAGAACAGACATTGAAGTTGATGGGATTGTGAACCTCCATAATCATCCAAGAGCTAGTGAGATGATCTTTGTTGAGGAAGGTGTATTGGAAGCTGGATTTCTTGATACACAAAACAAGGTTTTTCAGAAGTCTTTGAAGGAAGGTGATGTGTTTGTGATCCCTAAGGGCTTGTTCCATTTCTTTCTAAATCGTGGTGTAGAAGTTGCAACTGTGTTGTCTGTGTATAATAGCCAAAATCCAGGGTTGGGATCTCTTAATGCTACACCACCTTCTTCTTCCGAATCAGTTGAGAAGATAAAGAGGAAGCTTATATCACTTTATGAGTTAGAACTTGATAATGTTAATGATTTGAGTTTGGCTGTGTCGGAGATTATTTACAGTTAG

Protein sequence

>MS.gene049281.t1

MQRFQGKGGSQLNIPNGTWLTGSFNLTSDFTLFLHHGAVLLGSQDIKEWPIIEPLPSYGRGRERLGGRHISLIHANGVRNVVITGENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVRRVSGTTPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYVANVSISNIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVKGSSFEGLCFKNITLLGVALSATWHCEYVAGFTNGVFPVPCPELHNNGTTSWSFSLARPGGWLDKVEFNVLPSKASSELQDCHNLYFLQPQNTHQQRPVTSFNSQDLAKWYIYLACITAKLRIKMKMKSHSSFFFMFLTVAFSSIRISLADCANLQDTCPTSPSKKQTTYINGFSCNNPSNTLAHDFKTMELSKAGSIDDSGSSINIVTASKFPGLNTLGISIGRTDIEVDGIVNLHNHPRASEMIFVEEGVLEAGFLDTQNKVFQKSLKEGDVFVIPKGLFHFFLNRGVEVATVLSVYNSQNPGLGSLNATPPSSSESVEKIKRKLISLYELELDNVNDLSLAVSEIIYS