Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33970.t1 | XP_013469506.1 | 95.9 | 460 | 13 | 3 | 1 | 457 | 1 | 457 | 3.50E-206 | 727.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33970.t1 | Q9C8P0 | 79.1 | 465 | 89 | 2 | 1 | 457 | 1 | 465 | 1.6e-175 | 617.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33970.t1 | A0A072VNF5 | 95.9 | 460 | 13 | 3 | 1 | 457 | 1 | 457 | 2.5e-206 | 727.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33970 | MS.gene27364 | PPI |
| MS.gene33970 | MS.gene24338 | PPI |
| MS.gene33970 | MS.gene062739 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33970.t1 | MTR_1g096240 | 94.348 | 460 | 20 | 3 | 1 | 457 | 1 | 457 | 0.0 | 786 |
| MS.gene33970.t1 | MTR_1g111140 | 63.699 | 438 | 137 | 3 | 33 | 457 | 42 | 470 | 0.0 | 526 |
| MS.gene33970.t1 | MTR_8g018770 | 36.735 | 441 | 240 | 11 | 40 | 455 | 115 | 541 | 6.36e-69 | 229 |
| MS.gene33970.t1 | MTR_1g091037 | 31.222 | 442 | 255 | 9 | 44 | 457 | 213 | 633 | 1.31e-49 | 179 |
| MS.gene33970.t1 | MTR_1g091037 | 48.750 | 80 | 38 | 2 | 44 | 121 | 87 | 165 | 1.78e-13 | 73.2 |
| MS.gene33970.t1 | MTR_1g091037 | 31.222 | 442 | 255 | 9 | 44 | 457 | 205 | 625 | 1.50e-49 | 179 |
| MS.gene33970.t1 | MTR_1g091037 | 48.750 | 80 | 38 | 2 | 44 | 121 | 79 | 157 | 1.94e-13 | 72.8 |
| MS.gene33970.t1 | MTR_4g120220 | 26.591 | 440 | 279 | 8 | 51 | 457 | 89 | 517 | 4.40e-33 | 131 |
| MS.gene33970.t1 | MTR_2g006820 | 24.524 | 420 | 257 | 9 | 41 | 455 | 85 | 449 | 1.12e-31 | 126 |
| MS.gene33970.t1 | MTR_5g093300 | 24.582 | 419 | 257 | 9 | 41 | 455 | 88 | 451 | 2.53e-31 | 125 |
| MS.gene33970.t1 | MTR_1g096250 | 76.471 | 68 | 12 | 2 | 183 | 249 | 14 | 78 | 2.14e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33970.t1 | AT1G34430 | 75.054 | 465 | 108 | 3 | 1 | 457 | 1 | 465 | 0.0 | 642 |
| MS.gene33970.t1 | AT3G25860 | 61.783 | 471 | 142 | 4 | 7 | 457 | 28 | 480 | 0.0 | 518 |
| MS.gene33970.t1 | AT1G54220 | 36.195 | 431 | 255 | 10 | 40 | 455 | 112 | 537 | 2.80e-67 | 224 |
| MS.gene33970.t1 | AT1G54220 | 36.195 | 431 | 255 | 10 | 40 | 455 | 112 | 537 | 2.80e-67 | 224 |
| MS.gene33970.t1 | AT3G13930 | 37.037 | 432 | 250 | 10 | 40 | 455 | 112 | 537 | 1.23e-66 | 223 |
| MS.gene33970.t1 | AT3G52200 | 32.000 | 450 | 241 | 13 | 44 | 457 | 217 | 637 | 9.85e-49 | 177 |
| MS.gene33970.t1 | AT3G52200 | 46.250 | 80 | 40 | 2 | 44 | 121 | 90 | 168 | 3.01e-13 | 72.4 |
| MS.gene33970.t1 | AT3G52200 | 32.143 | 448 | 239 | 13 | 44 | 455 | 293 | 711 | 2.05e-48 | 177 |
| MS.gene33970.t1 | AT3G52200 | 46.250 | 80 | 40 | 2 | 44 | 121 | 166 | 244 | 2.86e-13 | 72.4 |
| MS.gene33970.t1 | AT3G06850 | 26.291 | 426 | 259 | 8 | 51 | 455 | 87 | 478 | 2.05e-34 | 134 |
| MS.gene33970.t1 | AT3G06850 | 26.291 | 426 | 259 | 8 | 51 | 455 | 87 | 478 | 2.05e-34 | 134 |
| MS.gene33970.t1 | AT4G26910 | 25.899 | 417 | 257 | 11 | 41 | 455 | 93 | 459 | 7.20e-27 | 112 |
| MS.gene33970.t1 | AT4G26910 | 25.899 | 417 | 257 | 11 | 41 | 455 | 94 | 460 | 7.63e-27 | 112 |
| MS.gene33970.t1 | AT4G26910 | 23.990 | 421 | 248 | 12 | 47 | 455 | 1 | 361 | 1.93e-21 | 95.9 |
| MS.gene33970.t1 | AT5G55070 | 31.892 | 185 | 119 | 4 | 273 | 455 | 281 | 460 | 1.93e-19 | 90.9 |
| MS.gene33970.t1 | AT5G55070 | 31.892 | 185 | 119 | 4 | 273 | 455 | 281 | 460 | 1.93e-19 | 90.9 |
Find 153 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGTGAAGACTGCGGTTTC+TGG | 0.157662 | 1.4:+74815352 | MS.gene33970:CDS |
| CAGGTGTTGGTGCGGGTGCG+GGG | 0.215967 | 1.4:-74815108 | None:intergenic |
| TAGGAATATGGTGGAGAGTT+TGG | 0.228931 | 1.4:+74815426 | MS.gene33970:CDS |
| GTGGAGTTGGGACAAATTAT+TGG | 0.234111 | 1.4:+74815250 | MS.gene33970:CDS |
| AGGAATATGGTGGAGAGTTT+GGG | 0.248856 | 1.4:+74815427 | MS.gene33970:CDS |
| AACATCCATGTCAGCTTTAT+CGG | 0.257343 | 1.4:-74814912 | None:intergenic |
| ACAGGTGTTGGTGCGGGTGC+GGG | 0.287075 | 1.4:-74815109 | None:intergenic |
| TCCCTCCGACGCCGGATGTT+TGG | 0.299241 | 1.4:-74815173 | None:intergenic |
| CTTTCCAACCTGGGAATGTT+TGG | 0.301930 | 1.4:+74818177 | MS.gene33970:CDS |
| GGGAGGTGGGGTTGCGGCGG+AGG | 0.305824 | 1.4:-74814724 | None:intergenic |
| GACTAGAAAGTAAGATCTTT+AGG | 0.307512 | 1.4:-74818606 | None:intergenic |
| AGGTGTTGGTGCGGGTGCGG+GGG | 0.313851 | 1.4:-74815107 | None:intergenic |
| GCGGTTTCTGGTGTTGAATT+GGG | 0.333108 | 1.4:+74815364 | MS.gene33970:CDS |
| CATGAAAATTTCGCGGATCT+TGG | 0.333734 | 1.4:-74814789 | None:intergenic |
| ACTTATTACACCGGTGCTTC+AGG | 0.337206 | 1.4:+74816314 | MS.gene33970:CDS |
| CTACAACTAGAGTTTATTAC+AGG | 0.340563 | 1.4:-74816225 | None:intergenic |
| TGCGGTTTCTGGTGTTGAAT+TGG | 0.350193 | 1.4:+74815363 | MS.gene33970:CDS |
| ATTATTGGGACTGGACCTTC+CGG | 0.352030 | 1.4:+74815265 | MS.gene33970:CDS |
| ATCACCCTATGCGAAGAAAT+TGG | 0.352194 | 1.4:+74815213 | MS.gene33970:CDS |
| TACAGGTGTTGGTGCGGGTG+CGG | 0.353694 | 1.4:-74815110 | None:intergenic |
| AGGAAGAGAGGAACGGTGTT+TGG | 0.355488 | 1.4:-74814694 | None:intergenic |
| TGTTGCGGCGGCGGCGGAGC+CGG | 0.382239 | 1.4:+74815333 | MS.gene33970:CDS |
| TGGAGTTGGGACAAATTATT+GGG | 0.398298 | 1.4:+74815251 | MS.gene33970:CDS |
| ACTAGAAAGTAAGATCTTTA+GGG | 0.398498 | 1.4:-74818605 | None:intergenic |
| AGGGAGTGTTGCGGCGGCGG+CGG | 0.408155 | 1.4:+74815327 | MS.gene33970:CDS |
| CTGTAATAAACTCTAGTTGT+AGG | 0.413101 | 1.4:+74816226 | MS.gene33970:CDS |
| GCAGATCATCGAGTAATCTA+TGG | 0.414637 | 1.4:+74818534 | MS.gene33970:CDS |
| GCCGCTGCAACAACCTTCTT+CGG | 0.416181 | 1.4:-74815142 | None:intergenic |
| AGATGAAGATGAAAGAGCTT+TGG | 0.417275 | 1.4:-74815053 | None:intergenic |
| CTCTTCCCTCCCTCCGACGC+CGG | 0.418170 | 1.4:-74815181 | None:intergenic |
| GGGGTTGCGGCGGAGGACGG+TGG | 0.420400 | 1.4:-74814717 | None:intergenic |
| AGGCTGCAGCTGCTTAGCTC+TGG | 0.423811 | 1.4:-74816484 | None:intergenic |
| GGCTGTTGTTTCCAAACATC+CGG | 0.425730 | 1.4:+74815162 | MS.gene33970:CDS |
| GTTGCGGCGGAGGACGGTGG+AGG | 0.425862 | 1.4:-74814714 | None:intergenic |
| TGGACCTTCCGGGAGGGTTG+TGG | 0.427760 | 1.4:+74815276 | MS.gene33970:CDS |
| ATAAGATTACTCACGGTTCC+AGG | 0.429298 | 1.4:-74818228 | None:intergenic |
| GTTGAGGCATTTGCAGCTAC+AGG | 0.429723 | 1.4:+74815307 | MS.gene33970:CDS |
| TGGTTGAAGTGTTGCGGTAA+AGG | 0.432205 | 1.4:-74814745 | None:intergenic |
| GAAGGAATTGAAGGTGGAGT+TGG | 0.435661 | 1.4:+74815237 | MS.gene33970:CDS |
| TACAGGGAGTGTTGCGGCGG+CGG | 0.436003 | 1.4:+74815324 | MS.gene33970:CDS |
| GGTGTTGGTGCGGGTGCGGG+GGG | 0.437355 | 1.4:-74815106 | None:intergenic |
| GGTTGAAGTGTTGCGGTAAA+GGG | 0.442544 | 1.4:-74814744 | None:intergenic |
| TTATTGGGACTGGACCTTCC+GGG | 0.444211 | 1.4:+74815266 | MS.gene33970:CDS |
| GGTAAAGGGAGGTGGGGTTG+CGG | 0.447342 | 1.4:-74814730 | None:intergenic |
| GAATGCTGTGAGTAGGAATA+TGG | 0.448089 | 1.4:+74815414 | MS.gene33970:CDS |
| AAAGGGAGGTGGGGTTGCGG+CGG | 0.450743 | 1.4:-74814727 | None:intergenic |
| AGTGTTGCGGTAAAGGGAGG+TGG | 0.453196 | 1.4:-74814738 | None:intergenic |
| AACAACGACACTATCGCCTT+TGG | 0.455584 | 1.4:-74814882 | None:intergenic |
| GTGGAAGGAGTTGGTTGATA+AGG | 0.457344 | 1.4:+74816461 | MS.gene33970:CDS |
| GGTGGGGTTGCGGCGGAGGA+CGG | 0.457710 | 1.4:-74814720 | None:intergenic |
| GCCGCTATTGTTGTTGAAGA+AGG | 0.464692 | 1.4:+74814959 | MS.gene33970:CDS |
| GTGTTGCGGTAAAGGGAGGT+GGG | 0.465688 | 1.4:-74814737 | None:intergenic |
| GCATTCTGCATTGTCGTAAA+CGG | 0.467916 | 1.4:-74815397 | None:intergenic |
| TTCGCCAATTTCTTCGCATA+GGG | 0.468048 | 1.4:-74815217 | None:intergenic |
| GCCAACTGTTGTGGCTACTA+AGG | 0.479728 | 1.4:+74818347 | MS.gene33970:CDS |
| AAGGAATTGAAGGTGGAGTT+GGG | 0.480219 | 1.4:+74815238 | MS.gene33970:CDS |
| GGTGCTTCAGGATGCTGATA+AGG | 0.482446 | 1.4:+74816326 | MS.gene33970:CDS |
| CGGTTTCTGGTGTTGAATTG+GGG | 0.486100 | 1.4:+74815365 | MS.gene33970:CDS |
| GTATACCCAACTCTAAAAGT+AGG | 0.486215 | 1.4:-74815454 | None:intergenic |
| GGTCCTCAATAATCTGAGAC+AGG | 0.489187 | 1.4:-74818584 | None:intergenic |
| TAGGGAGCGATTATGGCAGT+TGG | 0.490706 | 1.4:+74818315 | MS.gene33970:intron |
| GGTTGAGATTCTACAGGTGT+TGG | 0.492034 | 1.4:-74815121 | None:intergenic |
| TCTATTCATTGTCAAGAAAG+TGG | 0.493609 | 1.4:+74816442 | MS.gene33970:CDS |
| AAATTTGCAGGTCAATGTTA+CGG | 0.498023 | 1.4:+74818512 | MS.gene33970:intron |
| GCAGTCGCTGTGGCTATAGA+TGG | 0.499476 | 1.4:+74816288 | MS.gene33970:CDS |
| TTTGATGCTATTCTGCCTCC+TGG | 0.504002 | 1.4:+74818210 | MS.gene33970:CDS |
| TTGGGACAAATTATTGGGAC+TGG | 0.506592 | 1.4:+74815256 | MS.gene33970:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1.4:+74814834 | MS.gene33970:CDS |
| CTTCGCCAATTTCTTCGCAT+AGG | 0.507995 | 1.4:-74815218 | None:intergenic |
| TGTAATAAACTCTAGTTGTA+GGG | 0.508182 | 1.4:+74816227 | MS.gene33970:CDS |
| AAATATCAGATCAAGTCAAA+GGG | 0.514236 | 1.4:+74816147 | MS.gene33970:intron |
| AAAATATCAGATCAAGTCAA+AGG | 0.514317 | 1.4:+74816146 | MS.gene33970:intron |
| GGAATATGGTGGAGAGTTTG+GGG | 0.518956 | 1.4:+74815428 | MS.gene33970:CDS |
| TACTTTCACTCTTTCCAACC+TGG | 0.519342 | 1.4:+74818167 | MS.gene33970:CDS |
| ATCTTTCGCCACAACCCTCC+CGG | 0.522007 | 1.4:-74815284 | None:intergenic |
| TGTAGAATCTCAACCGAAGA+AGG | 0.522905 | 1.4:+74815129 | MS.gene33970:CDS |
| GTCATTGTGGAACTGAGTGC+TGG | 0.528269 | 1.4:-74814812 | None:intergenic |
| AAACATCCGGCGTCGGAGGG+AGG | 0.528369 | 1.4:+74815175 | MS.gene33970:CDS |
| TTCTTCGGTTGAGATTCTAC+AGG | 0.532090 | 1.4:-74815127 | None:intergenic |
| AACATCCGGCGTCGGAGGGA+GGG | 0.533225 | 1.4:+74815176 | MS.gene33970:CDS |
| TTCCAAACATCCGGCGTCGG+AGG | 0.533552 | 1.4:+74815171 | MS.gene33970:CDS |
| GAAGGTGATGTCGCCGCTGT+TGG | 0.535492 | 1.4:+74814977 | MS.gene33970:CDS |
| GCGGACGACGAAGTGGTTTG+TGG | 0.535513 | 1.4:-74814765 | None:intergenic |
| GAAATTGGCGAAGGAATTGA+AGG | 0.536019 | 1.4:+74815228 | MS.gene33970:CDS |
| GATTCTACAGGTGTTGGTGC+GGG | 0.539762 | 1.4:-74815115 | None:intergenic |
| TCCAAACATCCGGCGTCGGA+GGG | 0.544296 | 1.4:+74815172 | MS.gene33970:CDS |
| CCAGAAACCGCAGTCTTCAC+CGG | 0.546950 | 1.4:-74815352 | None:intergenic |
| TATGACAGCATTGCTTGCTA+AGG | 0.547412 | 1.4:+74816176 | MS.gene33970:CDS |
| GTCAAGAAAGTGGAAGGAGT+TGG | 0.548395 | 1.4:+74816452 | MS.gene33970:CDS |
| GATCAACGCCAAACATTCCC+AGG | 0.548864 | 1.4:-74818185 | None:intergenic |
| TCCTTAGTAGCCACAACAGT+TGG | 0.552942 | 1.4:-74818348 | None:intergenic |
| GGAGGACGGTGGAGGAAGAG+AGG | 0.554510 | 1.4:-74814706 | None:intergenic |
| TATACCCAACTCTAAAAGTA+GGG | 0.558796 | 1.4:-74815453 | None:intergenic |
| AACGCCAAACATTCCCAGGT+TGG | 0.559639 | 1.4:-74818181 | None:intergenic |
| TGGGACTGGACCTTCCGGGA+GGG | 0.560282 | 1.4:+74815270 | MS.gene33970:CDS |
| GTCTCTTGGATCAAATCAGA+AGG | 0.563675 | 1.4:+74814848 | MS.gene33970:CDS |
| ACTTTCACTCTTTCCAACCT+GGG | 0.563865 | 1.4:+74818168 | MS.gene33970:CDS |
| GCTACTAAGGATGGTCGCAT+TGG | 0.565084 | 1.4:+74818360 | MS.gene33970:CDS |
| AGTTTCAGCGAGAAATGCGA+TGG | 0.567042 | 1.4:-74815005 | None:intergenic |
| ATTTCTCGCTGAAACTGAAG+AGG | 0.570927 | 1.4:+74815012 | MS.gene33970:CDS |
| ATAAACTCTAGTTGTAGGGA+TGG | 0.571146 | 1.4:+74816231 | MS.gene33970:CDS |
| TTCATTGTCAAGAAAGTGGA+AGG | 0.575792 | 1.4:+74816446 | MS.gene33970:CDS |
| TTATCAGCATCCTGAAGCAC+CGG | 0.577664 | 1.4:-74816324 | None:intergenic |
| TGTTTCCAAACATCCGGCGT+CGG | 0.581572 | 1.4:+74815168 | MS.gene33970:CDS |
| GGTTTGTGGTTGAAGTGTTG+CGG | 0.586256 | 1.4:-74814751 | None:intergenic |
| AACCCTGTCTCAGATTATTG+AGG | 0.587408 | 1.4:+74818581 | MS.gene33970:CDS |
| GTGCTGGCATGAAAATTTCG+CGG | 0.589246 | 1.4:-74814796 | None:intergenic |
| ACTGTTGTGGCTACTAAGGA+TGG | 0.592061 | 1.4:+74818351 | MS.gene33970:CDS |
| TAAGGCTACAGCACTTGCGC+TGG | 0.592098 | 1.4:+74816194 | MS.gene33970:CDS |
| TGCAGCTACAGGGAGTGTTG+CGG | 0.595016 | 1.4:+74815318 | MS.gene33970:CDS |
| AGATTCTACAGGTGTTGGTG+CGG | 0.596519 | 1.4:-74815116 | None:intergenic |
| ACCGAAGAAGGTTGTTGCAG+CGG | 0.599613 | 1.4:+74815141 | MS.gene33970:CDS |
| GAGAGCATCAAGTGCATCAG+TGG | 0.600462 | 1.4:-74815482 | None:intergenic |
| TGTTGCGGTAAAGGGAGGTG+GGG | 0.601140 | 1.4:-74814736 | None:intergenic |
| TTGAGGCATTTGCAGCTACA+GGG | 0.601587 | 1.4:+74815308 | MS.gene33970:CDS |
| TGGCATGAAGAATCAAATGC+AGG | 0.601842 | 1.4:+74818380 | MS.gene33970:CDS |
| TGGTGTTGAATTGGGGACTG+TGG | 0.606170 | 1.4:+74815372 | MS.gene33970:CDS |
| AACATCGCAGCCAACTGTTG+TGG | 0.606548 | 1.4:+74818338 | MS.gene33970:CDS |
| TGCTGTGAGTAGGAATATGG+TGG | 0.607504 | 1.4:+74815417 | MS.gene33970:CDS |
| ATTGGCGAAGGAATTGAAGG+TGG | 0.607948 | 1.4:+74815231 | MS.gene33970:CDS |
| AGCTACAGGGAGTGTTGCGG+CGG | 0.608056 | 1.4:+74815321 | MS.gene33970:CDS |
| TTGGGACTGGACCTTCCGGG+AGG | 0.608271 | 1.4:+74815269 | MS.gene33970:CDS |
| CAATGCAGAATGCTGTGAGT+AGG | 0.608840 | 1.4:+74815407 | MS.gene33970:CDS |
| TGAAGTGTTGCGGTAAAGGG+AGG | 0.614058 | 1.4:-74814741 | None:intergenic |
| GGAGGGAGGGAAGAGAGTGG+TGG | 0.617615 | 1.4:+74815189 | MS.gene33970:CDS |
| TTCGCCACAACCCTCCCGGA+AGG | 0.621168 | 1.4:-74815280 | None:intergenic |
| TCTCTTGGATCAAATCAGAA+GGG | 0.623110 | 1.4:+74814849 | MS.gene33970:CDS |
| GTCGCTGTGGCTATAGATGG+TGG | 0.623776 | 1.4:+74816291 | MS.gene33970:CDS |
| TCTTGGCGCGGACGACGAAG+TGG | 0.624233 | 1.4:-74814772 | None:intergenic |
| CTCTTGGATCAAATCAGAAG+GGG | 0.626293 | 1.4:+74814850 | MS.gene33970:CDS |
| ACTTGATGCTCTCTACAAGA+AGG | 0.626411 | 1.4:+74815492 | MS.gene33970:CDS |
| TGAATCCGATAAAGCTGACA+TGG | 0.626546 | 1.4:+74814907 | MS.gene33970:CDS |
| GTCCTCAATAATCTGAGACA+GGG | 0.632705 | 1.4:-74818583 | None:intergenic |
| GATGTTGAAACTTTCTACGA+CGG | 0.632951 | 1.4:+74814929 | MS.gene33970:CDS |
| CATCAACATTGCAGTCGCTG+TGG | 0.633131 | 1.4:+74816278 | MS.gene33970:CDS |
| CAGCCTCATGAGTACACCAC+AGG | 0.636405 | 1.4:+74816501 | MS.gene33970:CDS |
| GAAGGGGACAAACTCTCCAA+AGG | 0.641779 | 1.4:+74814866 | MS.gene33970:CDS |
| GGTTGTGGCGAAAGATGTTG+AGG | 0.643297 | 1.4:+74815291 | MS.gene33970:CDS |
| AAATTTCGCGGATCTTGGCG+CGG | 0.648033 | 1.4:-74814784 | None:intergenic |
| GTTTCAGCGAGAAATGCGAT+GGG | 0.651735 | 1.4:-74815004 | None:intergenic |
| CTCAGTTCCACAATGACCGA+GGG | 0.651964 | 1.4:+74814818 | MS.gene33970:CDS |
| GGCGGAGCCGGTGAAGACTG+CGG | 0.652173 | 1.4:+74815345 | MS.gene33970:CDS |
| CTATGCGAAGAAATTGGCGA+AGG | 0.655491 | 1.4:+74815219 | MS.gene33970:CDS |
| ACCTTCTTCAACAACAATAG+CGG | 0.666193 | 1.4:-74814960 | None:intergenic |
| GTCGGAGGGAGGGAAGAGAG+TGG | 0.667080 | 1.4:+74815186 | MS.gene33970:CDS |
| ATACCTGTGGTGTACTCATG+AGG | 0.667204 | 1.4:-74816504 | None:intergenic |
| ACTCAGTTCCACAATGACCG+AGG | 0.671313 | 1.4:+74814817 | MS.gene33970:CDS |
| AGATGGTGGACTTATTACAC+CGG | 0.677164 | 1.4:+74816305 | MS.gene33970:CDS |
| GAATATGGTGGAGAGTTTGG+GGG | 0.700419 | 1.4:+74815429 | MS.gene33970:CDS |
| AGATTACTCACGGTTCCAGG+AGG | 0.719011 | 1.4:-74818225 | None:intergenic |
| CTTCAACAACAATAGCGGCG+AGG | 0.722816 | 1.4:-74814955 | None:intergenic |
| ACGGTGGAGGAAGAGAGGAA+CGG | 0.731025 | 1.4:-74814701 | None:intergenic |
| TGCGATGGGAGATCCAACAG+CGG | 0.746283 | 1.4:-74814990 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAAGTTAATTATCAA+TGG | - | chr1.4:74816619-74816638 | None:intergenic | 10.0% |
| !! | AATTTATAGTATAAAAAAAC+GGG | - | chr1.4:74817938-74817957 | None:intergenic | 10.0% |
| !! | CAATTTATAGTATAAAAAAA+CGG | - | chr1.4:74817939-74817958 | None:intergenic | 10.0% |
| !! | GTTTATTTGATGTATATTAT+AGG | + | chr1.4:74816413-74816432 | MS.gene33970:intron | 15.0% |
| !! | TTAGACGTTTATTAATAAAA+AGG | - | chr1.4:74817025-74817044 | None:intergenic | 15.0% |
| !!! | AAATGATTTTACTGAAATTT+TGG | - | chr1.4:74817630-74817649 | None:intergenic | 15.0% |
| !!! | AGTATGACTTATTTATTTTT+TGG | + | chr1.4:74818433-74818452 | MS.gene33970:intron | 15.0% |
| !!! | TTTGTCCAAATTTTAAAAAA+TGG | + | chr1.4:74816679-74816698 | MS.gene33970:intron | 15.0% |
| !! | ACTATAGAATTAGTTAATTC+TGG | + | chr1.4:74816770-74816789 | MS.gene33970:intron | 20.0% |
| !! | ATATATAATTACTATACCTG+TGG | - | chr1.4:74816520-74816539 | None:intergenic | 20.0% |
| !! | ATGATAAATTGTAAAATGCA+TGG | - | chr1.4:74816564-74816583 | None:intergenic | 20.0% |
| !! | CAAAAAATAAATGATAACAC+TGG | + | chr1.4:74816713-74816732 | MS.gene33970:intron | 20.0% |
| !! | TAGAAAAATCTGAAAAACTA+TGG | - | chr1.4:74816055-74816074 | None:intergenic | 20.0% |
| !!! | ATTTAAAACAGTTTGAACAT+GGG | - | chr1.4:74816099-74816118 | None:intergenic | 20.0% |
| !!! | CTAAGCCATTTTTTAAAATT+TGG | - | chr1.4:74816687-74816706 | None:intergenic | 20.0% |
| !!! | TTATTGGGATTTTTCATAAA+TGG | + | chr1.4:74815633-74815652 | MS.gene33970:intron | 20.0% |
| !!! | TTTGTATCTTTATGTTTTCA+GGG | + | chr1.4:74817891-74817910 | MS.gene33970:intron | 20.0% |
| !!! | TTTTGTATCTTTATGTTTTC+AGG | + | chr1.4:74817890-74817909 | MS.gene33970:intron | 20.0% |
| ! | AAAATATCAGATCAAGTCAA+AGG | + | chr1.4:74816146-74816165 | MS.gene33970:intron | 25.0% |
| ! | AAAATCCTTGATGAAAAGTT+TGG | + | chr1.4:74816863-74816882 | MS.gene33970:intron | 25.0% |
| ! | AAATATCAGATCAAGTCAAA+GGG | + | chr1.4:74816147-74816166 | MS.gene33970:intron | 25.0% |
| ! | ACTAATAAAGCGAATATATG+AGG | - | chr1.4:74817979-74817998 | None:intergenic | 25.0% |
| ! | ATATTAACAACTCTAGTCTA+AGG | - | chr1.4:74817372-74817391 | None:intergenic | 25.0% |
| ! | ATATTTGAACAATCAAGTTC+TGG | - | chr1.4:74817803-74817822 | None:intergenic | 25.0% |
| ! | CATAGAATCCTTATATTTGT+GGG | + | chr1.4:74816581-74816600 | MS.gene33970:intron | 25.0% |
| ! | CGTTTATTAATAAAAAGGAG+AGG | - | chr1.4:74817020-74817039 | None:intergenic | 25.0% |
| ! | GAATTTCTGAGCTAAATAAA+AGG | + | chr1.4:74815753-74815772 | MS.gene33970:intron | 25.0% |
| ! | TAACAGTTCAACTTAAAACA+TGG | - | chr1.4:74816906-74816925 | None:intergenic | 25.0% |
| ! | TATCTTATCCTACTTTAGTT+AGG | + | chr1.4:74817576-74817595 | MS.gene33970:intron | 25.0% |
| ! | TCATAGAATCCTTATATTTG+TGG | + | chr1.4:74816580-74816599 | MS.gene33970:intron | 25.0% |
| ! | TGTAATAAACTCTAGTTGTA+GGG | + | chr1.4:74816227-74816246 | MS.gene33970:CDS | 25.0% |
| ! | TTATAGAACTCGAATGATTA+GGG | + | chr1.4:74815673-74815692 | MS.gene33970:intron | 25.0% |
| ! | TTTATAGAACTCGAATGATT+AGG | + | chr1.4:74815672-74815691 | MS.gene33970:intron | 25.0% |
| !! | AAGTCTTATACTATATGCAT+AGG | + | chr1.4:74816649-74816668 | MS.gene33970:intron | 25.0% |
| !! | CATTTAAAACAGTTTGAACA+TGG | - | chr1.4:74816100-74816119 | None:intergenic | 25.0% |
| !!! | AACTGTTAGTTTTAGCTTTT+AGG | + | chr1.4:74816918-74816937 | MS.gene33970:intron | 25.0% |
| !!! | AATGCAATTTTCAGTTTTGA+TGG | - | chr1.4:74817132-74817151 | None:intergenic | 25.0% |
| !!! | ATGCAATTTTCAGTTTTGAT+GGG | - | chr1.4:74817131-74817150 | None:intergenic | 25.0% |
| !!! | CATTATATAGCTTGTTCTTT+TGG | - | chr1.4:74818052-74818071 | None:intergenic | 25.0% |
| !!! | TTAGTTTTAGCTTTTAGGTA+TGG | + | chr1.4:74816923-74816942 | MS.gene33970:intron | 25.0% |
| !!! | TTCTGTTCTTTTTTAACTGA+AGG | + | chr1.4:74818484-74818503 | MS.gene33970:intron | 25.0% |
| AAACCTCAAAAATACAGCTA+AGG | - | chr1.4:74817265-74817284 | None:intergenic | 30.0% | |
| AAACTGAAAATGGTAAAGGA+GGG | - | chr1.4:74817676-74817695 | None:intergenic | 30.0% | |
| AAATTTGCAGGTCAATGTTA+CGG | + | chr1.4:74818512-74818531 | MS.gene33970:intron | 30.0% | |
| AACATGCAATCAATCATACA+TGG | - | chr1.4:74815978-74815997 | None:intergenic | 30.0% | |
| AAGTAGGATAAGATAAGACA+TGG | - | chr1.4:74817571-74817590 | None:intergenic | 30.0% | |
| AATCCTTATATTTGTGGGAA+GGG | + | chr1.4:74816586-74816605 | MS.gene33970:intron | 30.0% | |
| AATTAACAGGAGAGCTAATA+TGG | + | chr1.4:74817336-74817355 | MS.gene33970:intron | 30.0% | |
| ACATGAATTTGATTGTTCTG+TGG | + | chr1.4:74818281-74818300 | MS.gene33970:intron | 30.0% | |
| AGAATCATATATCCATATCC+AGG | + | chr1.4:74818460-74818479 | MS.gene33970:intron | 30.0% | |
| AGCACAAATAAGATTACTCA+CGG | - | chr1.4:74818238-74818257 | None:intergenic | 30.0% | |
| ATATGAGGTAGAATTGTACT+AGG | - | chr1.4:74817964-74817983 | None:intergenic | 30.0% | |
| CTACAACTAGAGTTTATTAC+AGG | - | chr1.4:74816228-74816247 | None:intergenic | 30.0% | |
| CTCTAATAGAAAACAGTGAT+GGG | + | chr1.4:74818256-74818275 | MS.gene33970:intron | 30.0% | |
| CTGTAATAAACTCTAGTTGT+AGG | + | chr1.4:74816226-74816245 | MS.gene33970:CDS | 30.0% | |
| GACATGGATCATTATTGTTA+TGG | - | chr1.4:74817555-74817574 | None:intergenic | 30.0% | |
| GAGGTTGGAAGAATAAATTT+GGG | + | chr1.4:74817305-74817324 | MS.gene33970:intron | 30.0% | |
| GTTCAGTCATTTATATATGC+TGG | + | chr1.4:74818410-74818429 | MS.gene33970:intron | 30.0% | |
| GTTGAACTTTGACATTCAAT+TGG | + | chr1.4:74818080-74818099 | MS.gene33970:intron | 30.0% | |
| GTTTACAGAGCATGAAATTA+AGG | + | chr1.4:74817404-74817423 | MS.gene33970:intron | 30.0% | |
| TAAAACATGGCATATGCAAA+AGG | - | chr1.4:74816893-74816912 | None:intergenic | 30.0% | |
| TAACATTCAACAGTAATGTG+TGG | + | chr1.4:74817479-74817498 | MS.gene33970:intron | 30.0% | |
| TATAGAACTCGAATGATTAG+GGG | + | chr1.4:74815674-74815693 | MS.gene33970:intron | 30.0% | |
| TCTATTCATTGTCAAGAAAG+TGG | + | chr1.4:74816442-74816461 | MS.gene33970:CDS | 30.0% | |
| TGAGGTTGGAAGAATAAATT+TGG | + | chr1.4:74817304-74817323 | MS.gene33970:intron | 30.0% | |
| TGCTAAGCTATATAACATGA+GGG | + | chr1.4:74817181-74817200 | MS.gene33970:intron | 30.0% | |
| TTCCAAACTGAAAATGGTAA+AGG | - | chr1.4:74817680-74817699 | None:intergenic | 30.0% | |
| TTGGGTTTGAAAGAATTAAC+AGG | + | chr1.4:74817323-74817342 | MS.gene33970:intron | 30.0% | |
| TTGTTAATATTGCGAGAACA+AGG | + | chr1.4:74817382-74817401 | MS.gene33970:intron | 30.0% | |
| ! | AGCATTTTCCAAACTGAAAA+TGG | - | chr1.4:74817686-74817705 | None:intergenic | 30.0% |
| ! | ATGGTGTTCATTTGCTAAAA+AGG | + | chr1.4:74816391-74816410 | MS.gene33970:intron | 30.0% |
| ! | CGAATGAAATGTAATTTGTG+GGG | + | chr1.4:74816960-74816979 | MS.gene33970:intron | 30.0% |
| ! | GCGAATGAAATGTAATTTGT+GGG | + | chr1.4:74816959-74816978 | MS.gene33970:intron | 30.0% |
| ! | TATACCCAACTCTAAAAGTA+GGG | - | chr1.4:74815456-74815475 | None:intergenic | 30.0% |
| ! | TCTGTGGATTTCTTTTTGTA+GGG | + | chr1.4:74818297-74818316 | MS.gene33970:intron | 30.0% |
| ! | TTCTGTGGATTTCTTTTTGT+AGG | + | chr1.4:74818296-74818315 | MS.gene33970:intron | 30.0% |
| !! | TACTGAAATTTTGGTCTTCA+TGG | - | chr1.4:74817621-74817640 | None:intergenic | 30.0% |
| !! | TAGCTTTTAGGTATGGAATA+TGG | + | chr1.4:74816930-74816949 | MS.gene33970:intron | 30.0% |
| AACATGGGTCTACAAGTTTA+GGG | - | chr1.4:74816084-74816103 | None:intergenic | 35.0% | |
| AACTGAAAATGGTAAAGGAG+GGG | - | chr1.4:74817675-74817694 | None:intergenic | 35.0% | |
| AAGAAAATCCGAGTCCAAAT+TGG | + | chr1.4:74817100-74817119 | MS.gene33970:intron | 35.0% | |
| AAGTTAATTATCAATGGCCC+TGG | - | chr1.4:74816613-74816632 | None:intergenic | 35.0% | |
| ACAACAGAAATCAGTGAGAT+AGG | - | chr1.4:74818138-74818157 | None:intergenic | 35.0% | |
| ACCTTCTTCAACAACAATAG+CGG | - | chr1.4:74814963-74814982 | None:intergenic | 35.0% | |
| AGAAAATCCGAGTCCAAATT+GGG | + | chr1.4:74817101-74817120 | MS.gene33970:intron | 35.0% | |
| AGATGAAGATGAAAGAGCTT+TGG | - | chr1.4:74815056-74815075 | None:intergenic | 35.0% | |
| AGTTACTCAAGAATCCTACA+TGG | + | chr1.4:74817720-74817739 | MS.gene33970:intron | 35.0% | |
| ATAAACTCTAGTTGTAGGGA+TGG | + | chr1.4:74816231-74816250 | MS.gene33970:CDS | 35.0% | |
| ATGTGTGGTCAGTTACAAAT+TGG | + | chr1.4:74817494-74817513 | MS.gene33970:intron | 35.0% | |
| CAAACTGAAAATGGTAAAGG+AGG | - | chr1.4:74817677-74817696 | None:intergenic | 35.0% | |
| CAACAGAAATCAGTGAGATA+GGG | - | chr1.4:74818137-74818156 | None:intergenic | 35.0% | |
| CAGAGCATGAAATTAAGGAT+TGG | + | chr1.4:74817409-74817428 | MS.gene33970:intron | 35.0% | |
| CGCGAATGAAATGTAATTTG+TGG | + | chr1.4:74816958-74816977 | MS.gene33970:intron | 35.0% | |
| CTGAAGAGATAACTTGAAGT+TGG | + | chr1.4:74817441-74817460 | MS.gene33970:intron | 35.0% | |
| GAATCAGAATAAGACCAAGT+AGG | - | chr1.4:74816805-74816824 | None:intergenic | 35.0% | |
| GAATCCTTATATTTGTGGGA+AGG | + | chr1.4:74816585-74816604 | MS.gene33970:intron | 35.0% | |
| GATGTTGAAACTTTCTACGA+CGG | + | chr1.4:74814929-74814948 | MS.gene33970:CDS | 35.0% | |
| GCTCTAATAGAAAACAGTGA+TGG | + | chr1.4:74818255-74818274 | MS.gene33970:intron | 35.0% | |
| GCTTCTAATCTAACGTAAGA+TGG | + | chr1.4:74816372-74816391 | MS.gene33970:intron | 35.0% | |
| GTGCTAAGCTATATAACATG+AGG | + | chr1.4:74817180-74817199 | MS.gene33970:intron | 35.0% | |
| GTTAAAAAAGAACAGAAGCC+TGG | - | chr1.4:74818481-74818500 | None:intergenic | 35.0% | |
| TACAGACTTCAGCACTTATT+GGG | + | chr1.4:74815618-74815637 | MS.gene33970:intron | 35.0% | |
| TAGCCTATGAAGTACAAACA+CGG | + | chr1.4:74815782-74815801 | MS.gene33970:intron | 35.0% | |
| TAGCTAGATGACTATCACAT+TGG | + | chr1.4:74815571-74815590 | MS.gene33970:intron | 35.0% | |
| TCTCTTGGATCAAATCAGAA+GGG | + | chr1.4:74814849-74814868 | MS.gene33970:CDS | 35.0% | |
| TGCAAACATGAACTTTCTAG+AGG | + | chr1.4:74817229-74817248 | MS.gene33970:intron | 35.0% | |
| TGGAGTTGGGACAAATTATT+GGG | + | chr1.4:74815251-74815270 | MS.gene33970:CDS | 35.0% | |
| TTACAGACTTCAGCACTTAT+TGG | + | chr1.4:74815617-74815636 | MS.gene33970:intron | 35.0% | |
| TTATTCTGATTCTCCTGCAA+CGG | + | chr1.4:74816813-74816832 | MS.gene33970:intron | 35.0% | |
| TTCATTGTCAAGAAAGTGGA+AGG | + | chr1.4:74816446-74816465 | MS.gene33970:CDS | 35.0% | |
| TTTAGTTAGGTCAGCTACAT+GGG | + | chr1.4:74817589-74817608 | MS.gene33970:intron | 35.0% | |
| ! | AACATACATAGAAGAGTGTG+TGG | - | chr1.4:74817777-74817796 | None:intergenic | 35.0% |
| ! | AACATCCATGTCAGCTTTAT+CGG | - | chr1.4:74814915-74814934 | None:intergenic | 35.0% |
| ! | AATGTAATTTGTGGGGCATT+TGG | + | chr1.4:74816967-74816986 | MS.gene33970:intron | 35.0% |
| ! | AGTACAGCTATTTGTTACGA+AGG | - | chr1.4:74817862-74817881 | None:intergenic | 35.0% |
| ! | ATGATTAGGGGAAAAAGTGT+TGG | + | chr1.4:74815686-74815705 | MS.gene33970:intron | 35.0% |
| ! | CTCCTTTACCATTTTCAGTT+TGG | + | chr1.4:74817675-74817694 | MS.gene33970:intron | 35.0% |
| ! | GTATACCCAACTCTAAAAGT+AGG | - | chr1.4:74815457-74815476 | None:intergenic | 35.0% |
| !! | CAATTTGAAAGAGTGCTTTG+AGG | + | chr1.4:74817286-74817305 | MS.gene33970:intron | 35.0% |
| !! | CTGATTTCTGTTGTTTCTCT+AGG | + | chr1.4:74818144-74818163 | MS.gene33970:intron | 35.0% |
| !! | GTTCCTTAGCTGTATTTTTG+AGG | + | chr1.4:74817259-74817278 | MS.gene33970:intron | 35.0% |
| !! | TAAGTGCTGAAGTCTGTAAT+CGG | - | chr1.4:74815616-74815635 | None:intergenic | 35.0% |
| !! | TGACTATCACATTGGTTCTT+TGG | + | chr1.4:74815579-74815598 | MS.gene33970:intron | 35.0% |
| AAAGAACAGAAGCCTGGATA+TGG | - | chr1.4:74818475-74818494 | None:intergenic | 40.0% | |
| AACCCTGTCTCAGATTATTG+AGG | + | chr1.4:74818581-74818600 | MS.gene33970:CDS | 40.0% | |
| AAGCTATATAACATGAGGGC+TGG | + | chr1.4:74817185-74817204 | MS.gene33970:intron | 40.0% | |
| AAGGAATTGAAGGTGGAGTT+GGG | + | chr1.4:74815238-74815257 | MS.gene33970:CDS | 40.0% | |
| ACATGGCATATGCAAAAGGT+TGG | - | chr1.4:74816889-74816908 | None:intergenic | 40.0% | |
| ACTTGATGCTCTCTACAAGA+AGG | + | chr1.4:74815492-74815511 | MS.gene33970:CDS | 40.0% | |
| ACTTTCACTCTTTCCAACCT+GGG | + | chr1.4:74818168-74818187 | MS.gene33970:CDS | 40.0% | |
| ATAAGATTACTCACGGTTCC+AGG | - | chr1.4:74818231-74818250 | None:intergenic | 40.0% | |
| ATCACCCTATGCGAAGAAAT+TGG | + | chr1.4:74815213-74815232 | MS.gene33970:CDS | 40.0% | |
| ATTTCTCGCTGAAACTGAAG+AGG | + | chr1.4:74815012-74815031 | MS.gene33970:CDS | 40.0% | |
| CATGAAAATTTCGCGGATCT+TGG | - | chr1.4:74814792-74814811 | None:intergenic | 40.0% | |
| CTCTTGGATCAAATCAGAAG+GGG | + | chr1.4:74814850-74814869 | MS.gene33970:CDS | 40.0% | |
| CTGAAGGAATGCAAATTTGC+AGG | + | chr1.4:74818500-74818519 | MS.gene33970:intron | 40.0% | |
| CTTTAGTTAGGTCAGCTACA+TGG | + | chr1.4:74817588-74817607 | MS.gene33970:intron | 40.0% | |
| GAAAATCCGAGTCCAAATTG+GGG | + | chr1.4:74817102-74817121 | MS.gene33970:intron | 40.0% | |
| GAAATTGGCGAAGGAATTGA+AGG | + | chr1.4:74815228-74815247 | MS.gene33970:CDS | 40.0% | |
| GAACATGGGTCTACAAGTTT+AGG | - | chr1.4:74816085-74816104 | None:intergenic | 40.0% | |
| GAATGCTGTGAGTAGGAATA+TGG | + | chr1.4:74815414-74815433 | MS.gene33970:CDS | 40.0% | |
| GCAGATCATCGAGTAATCTA+TGG | + | chr1.4:74818534-74818553 | MS.gene33970:CDS | 40.0% | |
| GCATTCTGCATTGTCGTAAA+CGG | - | chr1.4:74815400-74815419 | None:intergenic | 40.0% | |
| GCTTCTTCAAGAGATTACCA+TGG | - | chr1.4:74818007-74818026 | None:intergenic | 40.0% | |
| GTAGCTGACCTAACTAAAGT+AGG | - | chr1.4:74817587-74817606 | None:intergenic | 40.0% | |
| GTCTCTTGGATCAAATCAGA+AGG | + | chr1.4:74814848-74814867 | MS.gene33970:CDS | 40.0% | |
| GTGGAGTTGGGACAAATTAT+TGG | + | chr1.4:74815250-74815269 | MS.gene33970:CDS | 40.0% | |
| TACATGGCAGGCAGTATATA+AGG | + | chr1.4:74817736-74817755 | MS.gene33970:intron | 40.0% | |
| TACTTTCACTCTTTCCAACC+TGG | + | chr1.4:74818167-74818186 | MS.gene33970:CDS | 40.0% | |
| TCTGGTCTACAAAACCTACT+TGG | + | chr1.4:74816788-74816807 | MS.gene33970:intron | 40.0% | |
| TGAATCCGATAAAGCTGACA+TGG | + | chr1.4:74814907-74814926 | MS.gene33970:CDS | 40.0% | |
| TGGCATGAAGAATCAAATGC+AGG | + | chr1.4:74818380-74818399 | MS.gene33970:CDS | 40.0% | |
| TGTAGAATCTCAACCGAAGA+AGG | + | chr1.4:74815129-74815148 | MS.gene33970:CDS | 40.0% | |
| TGTCCGTGTTTGTACTTCAT+AGG | - | chr1.4:74815788-74815807 | None:intergenic | 40.0% | |
| TTATATACTGCCTGCCATGT+AGG | - | chr1.4:74817737-74817756 | None:intergenic | 40.0% | |
| TTCGCCAATTTCTTCGCATA+GGG | - | chr1.4:74815220-74815239 | None:intergenic | 40.0% | |
| TTCTTCGGTTGAGATTCTAC+AGG | - | chr1.4:74815130-74815149 | None:intergenic | 40.0% | |
| TTGGGACAAATTATTGGGAC+TGG | + | chr1.4:74815256-74815275 | MS.gene33970:CDS | 40.0% | |
| TTTGATGGGAATCCCCAATT+TGG | - | chr1.4:74817117-74817136 | None:intergenic | 40.0% | |
| ! | AGGAATATGGTGGAGAGTTT+GGG | + | chr1.4:74815427-74815446 | MS.gene33970:CDS | 40.0% |
| ! | CGCTTTATTAGTTTCTGCCA+TGG | + | chr1.4:74817987-74818006 | MS.gene33970:intron | 40.0% |
| ! | CTTTTTGTAGGGAGCGATTA+TGG | + | chr1.4:74818308-74818327 | MS.gene33970:intron | 40.0% |
| ! | GTCCTCAATAATCTGAGACA+GGG | - | chr1.4:74818586-74818605 | None:intergenic | 40.0% |
| ! | GTTGGCCAAACTTTTCATCA+AGG | - | chr1.4:74816871-74816890 | None:intergenic | 40.0% |
| ! | TAGGAATATGGTGGAGAGTT+TGG | + | chr1.4:74815426-74815445 | MS.gene33970:CDS | 40.0% |
| ! | TATGACAGCATTGCTTGCTA+AGG | + | chr1.4:74816176-74816195 | MS.gene33970:CDS | 40.0% |
| !! | AGATGGTGGACTTATTACAC+CGG | + | chr1.4:74816305-74816324 | MS.gene33970:CDS | 40.0% |
| !! | TATGTTTTCAGGGCAGTTCA+TGG | + | chr1.4:74817901-74817920 | MS.gene33970:intron | 40.0% |
| !! | TTGAAAGAGTGCTTTGAGGT+TGG | + | chr1.4:74817290-74817309 | MS.gene33970:intron | 40.0% |
| AACAACGACACTATCGCCTT+TGG | - | chr1.4:74814885-74814904 | None:intergenic | 45.0% | |
| ACTCAAGAATCCTACATGGC+AGG | + | chr1.4:74817724-74817743 | MS.gene33970:intron | 45.0% | |
| ACTGTTGTGGCTACTAAGGA+TGG | + | chr1.4:74818351-74818370 | MS.gene33970:CDS | 45.0% | |
| ACTTATTACACCGGTGCTTC+AGG | + | chr1.4:74816314-74816333 | MS.gene33970:CDS | 45.0% | |
| AGTTTCAGCGAGAAATGCGA+TGG | - | chr1.4:74815008-74815027 | None:intergenic | 45.0% | |
| ATACCTGTGGTGTACTCATG+AGG | - | chr1.4:74816507-74816526 | None:intergenic | 45.0% | |
| ATATTTGTGGGAAGGGACCA+GGG | + | chr1.4:74816593-74816612 | MS.gene33970:intron | 45.0% | |
| ATTATTGGGACTGGACCTTC+CGG | + | chr1.4:74815265-74815284 | MS.gene33970:CDS | 45.0% | |
| ATTGGCGAAGGAATTGAAGG+TGG | + | chr1.4:74815231-74815250 | MS.gene33970:CDS | 45.0% | |
| CAACACGACAATGACACATG+TGG | - | chr1.4:74815875-74815894 | None:intergenic | 45.0% | |
| CAATGCAGAATGCTGTGAGT+AGG | + | chr1.4:74815407-74815426 | MS.gene33970:CDS | 45.0% | |
| CTATGCGAAGAAATTGGCGA+AGG | + | chr1.4:74815219-74815238 | MS.gene33970:CDS | 45.0% | |
| CTTCGCCAATTTCTTCGCAT+AGG | - | chr1.4:74815221-74815240 | None:intergenic | 45.0% | |
| CTTGAAGTTGGATGCTGTTG+TGG | + | chr1.4:74817453-74817472 | MS.gene33970:intron | 45.0% | |
| CTTTCCAACCTGGGAATGTT+TGG | + | chr1.4:74818177-74818196 | MS.gene33970:CDS | 45.0% | |
| GAAGGAATTGAAGGTGGAGT+TGG | + | chr1.4:74815237-74815256 | MS.gene33970:CDS | 45.0% | |
| GGTAAAGGAGGGGAAGAAAT+AGG | - | chr1.4:74817665-74817684 | None:intergenic | 45.0% | |
| GGTCCCTTCCCACAAATATA+AGG | - | chr1.4:74816592-74816611 | None:intergenic | 45.0% | |
| GGTTGAGATTCTACAGGTGT+TGG | - | chr1.4:74815124-74815143 | None:intergenic | 45.0% | |
| GTCAAGAAAGTGGAAGGAGT+TGG | + | chr1.4:74816452-74816471 | MS.gene33970:CDS | 45.0% | |
| GTCTCGTGTTTGACATGAGT+CGG | - | chr1.4:74815908-74815927 | None:intergenic | 45.0% | |
| GTTTCAGCGAGAAATGCGAT+GGG | - | chr1.4:74815007-74815026 | None:intergenic | 45.0% | |
| TATATTTGTGGGAAGGGACC+AGG | + | chr1.4:74816592-74816611 | MS.gene33970:intron | 45.0% | |
| TCCTTAGTAGCCACAACAGT+TGG | - | chr1.4:74818351-74818370 | None:intergenic | 45.0% | |
| TGCTGTGAGTAGGAATATGG+TGG | + | chr1.4:74815417-74815436 | MS.gene33970:CDS | 45.0% | |
| TTATCAGCATCCTGAAGCAC+CGG | - | chr1.4:74816327-74816346 | None:intergenic | 45.0% | |
| TTTGATGCTATTCTGCCTCC+TGG | + | chr1.4:74818210-74818229 | MS.gene33970:CDS | 45.0% | |
| ! | AATTTGTGGGGCATTTGGAG+TGG | + | chr1.4:74816972-74816991 | MS.gene33970:intron | 45.0% |
| ! | CACATGTGTCATTGTCGTGT+TGG | + | chr1.4:74815873-74815892 | MS.gene33970:intron | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1.4:74814837-74814856 | None:intergenic | 45.0% |
| ! | GAATATGGTGGAGAGTTTGG+GGG | + | chr1.4:74815429-74815448 | MS.gene33970:CDS | 45.0% |
| ! | GATTTTACCCTCGGTCATTG+TGG | - | chr1.4:74814828-74814847 | None:intergenic | 45.0% |
| ! | GCCGCTATTGTTGTTGAAGA+AGG | + | chr1.4:74814959-74814978 | MS.gene33970:CDS | 45.0% |
| ! | GGAATATGGTGGAGAGTTTG+GGG | + | chr1.4:74815428-74815447 | MS.gene33970:CDS | 45.0% |
| ! | GGTCCTCAATAATCTGAGAC+AGG | - | chr1.4:74818587-74818606 | None:intergenic | 45.0% |
| ! | GTGCTGGCATGAAAATTTCG+CGG | - | chr1.4:74814799-74814818 | None:intergenic | 45.0% |
| ! | GTGGAAGGAGTTGGTTGATA+AGG | + | chr1.4:74816461-74816480 | MS.gene33970:CDS | 45.0% |
| ! | TGTCATTGTCGTGTTGGTGT+CGG | + | chr1.4:74815879-74815898 | MS.gene33970:intron | 45.0% |
| ! | TTGAGGCATTTGCAGCTACA+GGG | + | chr1.4:74815308-74815327 | MS.gene33970:CDS | 45.0% |
| !! | AGATTCTACAGGTGTTGGTG+CGG | - | chr1.4:74815119-74815138 | None:intergenic | 45.0% |
| !! | CGGTTTCTGGTGTTGAATTG+GGG | + | chr1.4:74815365-74815384 | MS.gene33970:CDS | 45.0% |
| !! | GCGGTTTCTGGTGTTGAATT+GGG | + | chr1.4:74815364-74815383 | MS.gene33970:CDS | 45.0% |
| !! | GGCTGTTGTTTCCAAACATC+CGG | + | chr1.4:74815162-74815181 | MS.gene33970:CDS | 45.0% |
| !! | GGTTGAAGTGTTGCGGTAAA+GGG | - | chr1.4:74814747-74814766 | None:intergenic | 45.0% |
| !! | GGTTTGTGGTTGAAGTGTTG+CGG | - | chr1.4:74814754-74814773 | None:intergenic | 45.0% |
| !! | GTCATTGATTTCACCGTTGC+AGG | - | chr1.4:74816829-74816848 | None:intergenic | 45.0% |
| !! | TGCGGTTTCTGGTGTTGAAT+TGG | + | chr1.4:74815363-74815382 | MS.gene33970:CDS | 45.0% |
| !! | TGGTTGAAGTGTTGCGGTAA+AGG | - | chr1.4:74814748-74814767 | None:intergenic | 45.0% |
| !!! | GGGTCCCTACTTTTAGAGTT+GGG | + | chr1.4:74815449-74815468 | MS.gene33970:CDS | 45.0% |
| !! | ATAGTAATTATATATTTATT+GGG | + | chr1.4:74816525-74816544 | MS.gene33970:intron | 5.0% |
| !! | TATAGTAATTATATATTTAT+TGG | + | chr1.4:74816524-74816543 | MS.gene33970:intron | 5.0% |
| AAATTTCGCGGATCTTGGCG+CGG | - | chr1.4:74814787-74814806 | None:intergenic | 50.0% | |
| AACATCGCAGCCAACTGTTG+TGG | + | chr1.4:74818338-74818357 | MS.gene33970:CDS | 50.0% | |
| AACGCCAAACATTCCCAGGT+TGG | - | chr1.4:74818184-74818203 | None:intergenic | 50.0% | |
| ACCGAAGAAGGTTGTTGCAG+CGG | + | chr1.4:74815141-74815160 | MS.gene33970:CDS | 50.0% | |
| ACTCAGTTCCACAATGACCG+AGG | + | chr1.4:74814817-74814836 | MS.gene33970:CDS | 50.0% | |
| AGATTACTCACGGTTCCAGG+AGG | - | chr1.4:74818228-74818247 | None:intergenic | 50.0% | |
| AGGAAGAGAGGAACGGTGTT+TGG | - | chr1.4:74814697-74814716 | None:intergenic | 50.0% | |
| AGTTAGGTCAGCTACATGGG+TGG | + | chr1.4:74817592-74817611 | MS.gene33970:intron | 50.0% | |
| CATCAACATTGCAGTCGCTG+TGG | + | chr1.4:74816278-74816297 | MS.gene33970:CDS | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1.4:74814834-74814853 | MS.gene33970:CDS | 50.0% | |
| CTCAGTTCCACAATGACCGA+GGG | + | chr1.4:74814818-74814837 | MS.gene33970:CDS | 50.0% | |
| CTTCAACAACAATAGCGGCG+AGG | - | chr1.4:74814958-74814977 | None:intergenic | 50.0% | |
| GAAGGGGACAAACTCTCCAA+AGG | + | chr1.4:74814866-74814885 | MS.gene33970:CDS | 50.0% | |
| GATCAACGCCAAACATTCCC+AGG | - | chr1.4:74818188-74818207 | None:intergenic | 50.0% | |
| GCCAACTGTTGTGGCTACTA+AGG | + | chr1.4:74818347-74818366 | MS.gene33970:CDS | 50.0% | |
| GCTACTAAGGATGGTCGCAT+TGG | + | chr1.4:74818360-74818379 | MS.gene33970:CDS | 50.0% | |
| GGGAATCCCCAATTTGGACT+CGG | - | chr1.4:74817111-74817130 | None:intergenic | 50.0% | |
| GGTGCTTCAGGATGCTGATA+AGG | + | chr1.4:74816326-74816345 | MS.gene33970:CDS | 50.0% | |
| GGTTGTGGCGAAAGATGTTG+AGG | + | chr1.4:74815291-74815310 | MS.gene33970:CDS | 50.0% | |
| GTCATTGTGGAACTGAGTGC+TGG | - | chr1.4:74814815-74814834 | None:intergenic | 50.0% | |
| TAGGGAGCGATTATGGCAGT+TGG | + | chr1.4:74818315-74818334 | MS.gene33970:intron | 50.0% | |
| TGTTTCCAAACATCCGGCGT+CGG | + | chr1.4:74815168-74815187 | MS.gene33970:CDS | 50.0% | |
| TTATTGGGACTGGACCTTCC+GGG | + | chr1.4:74815266-74815285 | MS.gene33970:CDS | 50.0% | |
| ! | GTCATTGTCGTGTTGGTGTC+GGG | + | chr1.4:74815880-74815899 | MS.gene33970:intron | 50.0% |
| ! | GTTGAGGCATTTGCAGCTAC+AGG | + | chr1.4:74815307-74815326 | MS.gene33970:CDS | 50.0% |
| ! | TGGTGTTGAATTGGGGACTG+TGG | + | chr1.4:74815372-74815391 | MS.gene33970:CDS | 50.0% |
| !! | GAGAGCATCAAGTGCATCAG+TGG | - | chr1.4:74815485-74815504 | None:intergenic | 50.0% |
| !! | GATTCTACAGGTGTTGGTGC+GGG | - | chr1.4:74815118-74815137 | None:intergenic | 50.0% |
| !! | TGAAGTGTTGCGGTAAAGGG+AGG | - | chr1.4:74814744-74814763 | None:intergenic | 50.0% |
| !!! | GGGGTCCCTACTTTTAGAGT+TGG | + | chr1.4:74815448-74815467 | MS.gene33970:CDS | 50.0% |
| ACGGTGGAGGAAGAGAGGAA+CGG | - | chr1.4:74814704-74814723 | None:intergenic | 55.0% | |
| AGTGTTGCGGTAAAGGGAGG+TGG | - | chr1.4:74814741-74814760 | None:intergenic | 55.0% | |
| ATCTTTCGCCACAACCCTCC+CGG | - | chr1.4:74815287-74815306 | None:intergenic | 55.0% | |
| CAGCCTCATGAGTACACCAC+AGG | + | chr1.4:74816501-74816520 | MS.gene33970:CDS | 55.0% | |
| CCAGAAACCGCAGTCTTCAC+CGG | - | chr1.4:74815355-74815374 | None:intergenic | 55.0% | |
| GCAGTCGCTGTGGCTATAGA+TGG | + | chr1.4:74816288-74816307 | MS.gene33970:CDS | 55.0% | |
| GCCGCTGCAACAACCTTCTT+CGG | - | chr1.4:74815145-74815164 | None:intergenic | 55.0% | |
| GTCGCTGTGGCTATAGATGG+TGG | + | chr1.4:74816291-74816310 | MS.gene33970:CDS | 55.0% | |
| GTGTTGCGGTAAAGGGAGGT+GGG | - | chr1.4:74814740-74814759 | None:intergenic | 55.0% | |
| TAAGGCTACAGCACTTGCGC+TGG | + | chr1.4:74816194-74816213 | MS.gene33970:CDS | 55.0% | |
| TGCGATGGGAGATCCAACAG+CGG | - | chr1.4:74814993-74815012 | None:intergenic | 55.0% | |
| TGTTGCGGTAAAGGGAGGTG+GGG | - | chr1.4:74814739-74814758 | None:intergenic | 55.0% | |
| !! | TGCAGCTACAGGGAGTGTTG+CGG | + | chr1.4:74815318-74815337 | MS.gene33970:CDS | 55.0% |
| AGGCTGCAGCTGCTTAGCTC+TGG | - | chr1.4:74816487-74816506 | None:intergenic | 60.0% | |
| CCGGTGAAGACTGCGGTTTC+TGG | + | chr1.4:74815352-74815371 | MS.gene33970:CDS | 60.0% | |
| GAAGGTGATGTCGCCGCTGT+TGG | + | chr1.4:74814977-74814996 | MS.gene33970:CDS | 60.0% | |
| GCGGACGACGAAGTGGTTTG+TGG | - | chr1.4:74814768-74814787 | None:intergenic | 60.0% | |
| GGTAAAGGGAGGTGGGGTTG+CGG | - | chr1.4:74814733-74814752 | None:intergenic | 60.0% | |
| ! | TCCAAACATCCGGCGTCGGA+GGG | + | chr1.4:74815172-74815191 | MS.gene33970:CDS | 60.0% |
| ! | TTCCAAACATCCGGCGTCGG+AGG | + | chr1.4:74815171-74815190 | MS.gene33970:CDS | 60.0% |
| !! | AGCTACAGGGAGTGTTGCGG+CGG | + | chr1.4:74815321-74815340 | MS.gene33970:CDS | 60.0% |
| !! | TACAGGTGTTGGTGCGGGTG+CGG | - | chr1.4:74815113-74815132 | None:intergenic | 60.0% |
| AAAGGGAGGTGGGGTTGCGG+CGG | - | chr1.4:74814730-74814749 | None:intergenic | 65.0% | |
| GGAGGACGGTGGAGGAAGAG+AGG | - | chr1.4:74814709-74814728 | None:intergenic | 65.0% | |
| GGAGGGAGGGAAGAGAGTGG+TGG | + | chr1.4:74815189-74815208 | MS.gene33970:CDS | 65.0% | |
| GTCGGAGGGAGGGAAGAGAG+TGG | + | chr1.4:74815186-74815205 | MS.gene33970:CDS | 65.0% | |
| TCCCTCCGACGCCGGATGTT+TGG | - | chr1.4:74815176-74815195 | None:intergenic | 65.0% | |
| TCTTGGCGCGGACGACGAAG+TGG | - | chr1.4:74814775-74814794 | None:intergenic | 65.0% | |
| TGGACCTTCCGGGAGGGTTG+TGG | + | chr1.4:74815276-74815295 | MS.gene33970:CDS | 65.0% | |
| TGGGACTGGACCTTCCGGGA+GGG | + | chr1.4:74815270-74815289 | MS.gene33970:CDS | 65.0% | |
| TTCGCCACAACCCTCCCGGA+AGG | - | chr1.4:74815283-74815302 | None:intergenic | 65.0% | |
| TTGGGACTGGACCTTCCGGG+AGG | + | chr1.4:74815269-74815288 | MS.gene33970:CDS | 65.0% | |
| ! | AAACATCCGGCGTCGGAGGG+AGG | + | chr1.4:74815175-74815194 | MS.gene33970:CDS | 65.0% |
| ! | AACATCCGGCGTCGGAGGGA+GGG | + | chr1.4:74815176-74815195 | MS.gene33970:CDS | 65.0% |
| !! | ACAGGTGTTGGTGCGGGTGC+GGG | - | chr1.4:74815112-74815131 | None:intergenic | 65.0% |
| !! | TACAGGGAGTGTTGCGGCGG+CGG | + | chr1.4:74815324-74815343 | MS.gene33970:CDS | 65.0% |
| CTCTTCCCTCCCTCCGACGC+CGG | - | chr1.4:74815184-74815203 | None:intergenic | 70.0% | |
| GGCGGAGCCGGTGAAGACTG+CGG | + | chr1.4:74815345-74815364 | MS.gene33970:CDS | 70.0% | |
| !! | AGGTGTTGGTGCGGGTGCGG+GGG | - | chr1.4:74815110-74815129 | None:intergenic | 70.0% |
| !! | CAGGTGTTGGTGCGGGTGCG+GGG | - | chr1.4:74815111-74815130 | None:intergenic | 70.0% |
| GGTGGGGTTGCGGCGGAGGA+CGG | - | chr1.4:74814723-74814742 | None:intergenic | 75.0% | |
| GTTGCGGCGGAGGACGGTGG+AGG | - | chr1.4:74814717-74814736 | None:intergenic | 75.0% | |
| !! | AGGGAGTGTTGCGGCGGCGG+CGG | + | chr1.4:74815327-74815346 | MS.gene33970:CDS | 75.0% |
| !! | GGTGTTGGTGCGGGTGCGGG+GGG | - | chr1.4:74815109-74815128 | None:intergenic | 75.0% |
| ! | GGGAGGTGGGGTTGCGGCGG+AGG | - | chr1.4:74814727-74814746 | None:intergenic | 80.0% |
| ! | GGGGTTGCGGCGGAGGACGG+TGG | - | chr1.4:74814720-74814739 | None:intergenic | 80.0% |
| ! | TGGTGCGGGTGCGGGGGGTG+CGG | - | chr1.4:74815104-74815123 | None:intergenic | 80.0% |
| ! | TGTTGCGGCGGCGGCGGAGC+CGG | + | chr1.4:74815333-74815352 | MS.gene33970:CDS | 80.0% |
| !! | GGGGGGTGCGGGTGCGGGTG+AGG | - | chr1.4:74815092-74815111 | None:intergenic | 85.0% |
| !! | GGGTGCGGGGGGTGCGGGTG+CGG | - | chr1.4:74815098-74815117 | None:intergenic | 85.0% |
| !! | GGTGCGGGGGGTGCGGGTGC+GGG | - | chr1.4:74815097-74815116 | None:intergenic | 85.0% |
| !! | GGTGCGGGTGCGGGGGGTGC+GGG | - | chr1.4:74815103-74815122 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 74814680 | 74818626 | 74814680 | ID=MS.gene33970 |
| chr1.4 | mRNA | 74814680 | 74818626 | 74814680 | ID=MS.gene33970.t1;Parent=MS.gene33970 |
| chr1.4 | exon | 74814680 | 74815513 | 74814680 | ID=MS.gene33970.t1.exon1;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74814680 | 74815513 | 74814680 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| chr1.4 | exon | 74816156 | 74816347 | 74816156 | ID=MS.gene33970.t1.exon2;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74816156 | 74816347 | 74816156 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| chr1.4 | exon | 74816435 | 74816522 | 74816435 | ID=MS.gene33970.t1.exon3;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74816435 | 74816522 | 74816435 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| chr1.4 | exon | 74818166 | 74818236 | 74818166 | ID=MS.gene33970.t1.exon4;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74818166 | 74818236 | 74818166 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| chr1.4 | exon | 74818318 | 74818401 | 74818318 | ID=MS.gene33970.t1.exon5;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74818318 | 74818401 | 74818318 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| chr1.4 | exon | 74818522 | 74818626 | 74818522 | ID=MS.gene33970.t1.exon6;Parent=MS.gene33970.t1 |
| chr1.4 | CDS | 74818522 | 74818626 | 74818522 | ID=cds.MS.gene33970.t1;Parent=MS.gene33970.t1 |
| Gene Sequence |
| Protein sequence |
