AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34420.t1 MTR_1g102350 96.552 435 13 1 159 593 350 782 0.0 858
MS.gene34420.t1 MTR_1g102350 96.512 172 6 0 1 172 41 212 5.61e-113 355
MS.gene34420.t1 MTR_2g042130 51.185 422 190 5 175 589 362 774 3.73e-138 421
MS.gene34420.t1 MTR_2g042130 42.021 188 96 4 1 179 31 214 8.56e-39 152
MS.gene34420.t1 MTR_4g095360 48.276 435 213 6 159 589 330 756 9.16e-135 411
MS.gene34420.t1 MTR_4g095360 46.471 170 77 3 1 170 35 190 1.51e-43 166
MS.gene34420.t1 MTR_4g073540 50.350 429 201 6 172 593 350 773 2.26e-134 410
MS.gene34420.t1 MTR_4g073540 40.828 169 83 2 1 169 37 188 4.91e-38 150
MS.gene34420.t1 MTR_4g125180 49.645 423 194 7 175 589 342 753 6.69e-133 406
MS.gene34420.t1 MTR_4g125180 45.455 143 73 3 41 183 58 195 1.24e-32 134
MS.gene34420.t1 MTR_8g022870 49.087 438 205 6 173 593 345 781 1.20e-127 393
MS.gene34420.t1 MTR_8g022870 42.442 172 89 3 1 172 34 195 2.89e-36 145
MS.gene34420.t1 MTR_7g075900 47.518 423 211 6 172 589 357 773 2.74e-125 387
MS.gene34420.t1 MTR_7g075900 46.970 132 63 2 40 169 79 205 1.79e-31 130
MS.gene34420.t1 MTR_8g021130 48.000 425 204 8 169 585 357 772 1.72e-120 375
MS.gene34420.t1 MTR_8g021130 39.181 171 87 5 6 170 47 206 2.85e-23 105
MS.gene34420.t1 MTR_5g016120 47.494 419 213 5 174 589 348 762 1.79e-118 369
MS.gene34420.t1 MTR_5g016120 43.678 174 76 4 3 172 42 197 4.12e-36 144
MS.gene34420.t1 MTR_3g102810 47.653 426 207 7 174 589 337 756 5.05e-118 368
MS.gene34420.t1 MTR_3g102810 45.614 171 79 2 1 171 29 185 5.96e-42 162
MS.gene34420.t1 MTR_1g018510 46.279 430 211 7 174 589 304 727 8.91e-116 361
MS.gene34420.t1 MTR_1g018510 44.242 165 78 2 7 171 2 152 6.90e-41 158
MS.gene34420.t1 MTR_0047s0120 46.301 419 218 5 174 589 344 758 6.03e-112 352
MS.gene34420.t1 MTR_0047s0120 41.379 174 80 3 3 172 38 193 2.01e-35 142
MS.gene34420.t1 MTR_7g098630 45.433 427 210 10 174 587 344 760 3.12e-102 329
MS.gene34420.t1 MTR_7g098630 40.123 162 89 2 9 170 40 193 1.23e-32 134
MS.gene34420.t1 MTR_4g134320 42.105 418 225 8 174 587 361 765 1.25e-99 320
MS.gene34420.t1 MTR_4g134320 38.150 173 89 5 12 179 54 213 1.51e-24 108
MS.gene34420.t1 MTR_7g098070 41.371 423 231 8 169 587 352 761 5.19e-99 318
MS.gene34420.t1 MTR_7g098070 40.299 134 74 3 38 168 67 197 2.61e-23 105
MS.gene34420.t1 MTR_3g082200 41.190 420 229 9 174 587 224 631 5.67e-99 314
MS.gene34420.t1 MTR_3g082200 50.000 58 28 1 119 176 18 74 2.68e-12 70.1
MS.gene34420.t1 MTR_3g082200 41.190 420 229 9 174 587 239 646 8.75e-99 314
MS.gene34420.t1 MTR_3g082200 45.333 75 40 1 102 176 16 89 1.96e-15 80.1
MS.gene34420.t1 MTR_8g072440 42.453 424 212 8 172 587 311 710 3.57e-98 315
MS.gene34420.t1 MTR_8g072440 40.625 192 96 6 12 193 9 192 2.23e-32 133
MS.gene34420.t1 MTR_3g082200 41.190 420 229 9 174 587 362 769 6.95e-98 315
MS.gene34420.t1 MTR_3g082200 39.437 142 82 2 38 176 72 212 2.04e-25 111
MS.gene34420.t1 MTR_8g072440 42.453 424 212 8 172 587 353 752 8.69e-98 315
MS.gene34420.t1 MTR_8g072440 43.210 162 81 4 42 193 74 234 1.66e-31 130
MS.gene34420.t1 MTR_4g103495 43.662 426 224 10 169 587 207 623 7.32e-97 309
MS.gene34420.t1 MTR_4g103495 45.070 71 34 2 119 184 3 73 1.30e-12 71.2
MS.gene34420.t1 MTR_4g103480 43.365 422 225 8 174 589 375 788 4.23e-95 308
MS.gene34420.t1 MTR_4g103480 45.185 135 72 2 38 170 86 220 4.43e-28 120
MS.gene34420.t1 MTR_5g055920 43.365 422 225 8 174 589 255 668 4.76e-95 305
MS.gene34420.t1 MTR_5g055920 40.217 92 46 3 80 170 17 100 1.18e-11 68.2
MS.gene34420.t1 MTR_5g025010 42.721 419 220 8 172 587 316 717 1.26e-94 306
MS.gene34420.t1 MTR_5g025010 47.015 134 59 2 42 169 37 164 1.87e-31 130
MS.gene34420.t1 MTR_5g025010 42.721 419 220 8 172 587 348 749 1.74e-94 306
MS.gene34420.t1 MTR_5g025010 47.015 134 59 2 42 169 69 196 1.95e-31 130
MS.gene34420.t1 MTR_4g103450 42.891 422 227 8 174 589 332 745 9.30e-93 301
MS.gene34420.t1 MTR_4g103450 45.185 135 72 2 38 170 43 177 2.53e-28 120
MS.gene34420.t1 MTR_4g102400 42.791 430 203 13 176 589 352 754 9.95e-93 301
MS.gene34420.t1 MTR_4g102400 37.037 162 89 5 6 164 46 197 3.85e-22 101
MS.gene34420.t1 MTR_4g103490 42.431 436 221 10 174 589 360 785 1.18e-92 302
MS.gene34420.t1 MTR_4g103490 43.791 153 80 3 38 184 73 225 1.53e-30 127
MS.gene34420.t1 MTR_4g103430 42.417 422 227 9 174 588 357 769 2.69e-90 295
MS.gene34420.t1 MTR_4g103430 46.667 135 70 2 38 170 69 203 1.06e-29 125
MS.gene34420.t1 MTR_5g011340 41.805 421 224 7 176 589 346 752 5.14e-89 291
MS.gene34420.t1 MTR_5g011340 35.976 164 83 4 38 188 75 229 3.58e-23 104
MS.gene34420.t1 MTR_5g011320 41.608 423 221 7 176 589 342 747 6.06e-88 288
MS.gene34420.t1 MTR_5g011320 36.585 164 82 4 38 188 71 225 1.39e-23 105
MS.gene34420.t1 MTR_5g011190 41.274 424 224 10 176 590 349 756 8.81e-87 285
MS.gene34420.t1 MTR_5g011190 35.366 164 84 5 38 188 78 232 3.36e-21 98.6
MS.gene34420.t1 MTR_5g011310 41.469 422 224 8 176 589 349 755 1.35e-86 285
MS.gene34420.t1 MTR_5g011310 35.366 164 84 4 38 188 78 232 6.66e-22 100
MS.gene34420.t1 MTR_5g011270 40.091 439 236 9 159 589 334 753 1.39e-86 285
MS.gene34420.t1 MTR_5g011270 35.233 193 101 6 6 188 55 233 7.71e-22 100
MS.gene34420.t1 MTR_5g011260 39.545 440 239 9 159 590 334 754 5.29e-85 281
MS.gene34420.t1 MTR_5g011260 36.598 194 97 7 6 188 55 233 6.90e-23 103
MS.gene34420.t1 MTR_5g085690 40.920 435 233 11 169 587 362 788 7.96e-85 281
MS.gene34420.t1 MTR_5g085690 41.844 141 73 4 38 170 70 209 3.38e-24 108
MS.gene34420.t1 MTR_5g011370 40.898 423 225 10 176 589 369 775 8.75e-85 281
MS.gene34420.t1 MTR_5g011370 35.366 164 84 5 38 188 98 252 8.90e-22 100
MS.gene34420.t1 MTR_4g053630 39.294 425 234 12 169 585 242 650 1.21e-83 275
MS.gene34420.t1 MTR_4g053630 52.222 90 41 1 80 169 3 90 5.04e-20 94.7
MS.gene34420.t1 MTR_4g103495 44.415 376 196 9 169 540 356 722 2.20e-83 276
MS.gene34420.t1 MTR_4g103495 42.308 156 84 3 35 184 67 222 2.75e-28 120
MS.gene34420.t1 MTR_4g103400 40.185 433 236 13 169 587 353 776 3.11e-83 276
MS.gene34420.t1 MTR_4g103400 39.007 141 74 3 38 171 69 204 4.97e-24 107
MS.gene34420.t1 MTR_4g053630 39.294 425 234 12 169 585 319 727 5.24e-83 275
MS.gene34420.t1 MTR_4g053630 43.662 142 77 2 28 169 29 167 1.97e-27 117
MS.gene34420.t1 MTR_8g042670 41.371 423 227 11 174 587 223 633 7.33e-83 272
MS.gene34420.t1 MTR_8g042670 47.368 57 30 0 108 164 16 72 1.01e-11 68.2
MS.gene34420.t1 MTR_3g061110 40.533 375 215 7 217 589 386 754 2.28e-82 274
MS.gene34420.t1 MTR_3g061110 38.562 153 84 3 38 184 69 217 1.58e-24 108
MS.gene34420.t1 MTR_8g042670 41.371 423 227 11 174 587 347 757 1.25e-81 272
MS.gene34420.t1 MTR_8g042670 44.615 130 70 1 37 164 67 196 2.14e-27 117
MS.gene34420.t1 MTR_5g011280 39.151 424 232 8 176 590 352 758 2.97e-81 271
MS.gene34420.t1 MTR_5g011280 33.617 235 119 9 6 221 55 271 3.51e-19 92.0
MS.gene34420.t1 MTR_8g042710 41.388 418 229 10 174 583 350 759 1.94e-80 269
MS.gene34420.t1 MTR_8g042710 44.030 134 66 3 37 164 58 188 2.58e-28 120
MS.gene34420.t1 MTR_8g024390 39.070 430 224 14 173 588 353 758 6.78e-80 267
MS.gene34420.t1 MTR_8g024390 39.766 171 97 3 1 170 33 198 2.03e-32 133
MS.gene34420.t1 MTR_1g078110 37.355 431 228 14 174 590 354 756 1.57e-79 266
MS.gene34420.t1 MTR_1g078110 38.122 181 105 3 1 177 34 211 9.86e-34 137
MS.gene34420.t1 MTR_2g018135 39.211 431 230 9 174 589 371 784 1.64e-79 267
MS.gene34420.t1 MTR_2g018135 45.890 146 66 5 37 169 61 206 2.17e-28 120
MS.gene34420.t1 MTR_2g018125 39.110 427 235 8 174 589 373 785 1.85e-79 266
MS.gene34420.t1 MTR_2g018125 41.611 149 76 4 32 169 60 208 3.11e-28 120
MS.gene34420.t1 MTR_7g081750 38.117 446 236 14 171 587 363 797 7.87e-79 265
MS.gene34420.t1 MTR_7g081750 43.571 140 74 3 38 173 72 210 7.62e-28 119
MS.gene34420.t1 MTR_8g024420 37.931 435 230 14 169 588 313 722 1.05e-78 263
MS.gene34420.t1 MTR_8g024420 40.351 171 94 3 1 170 1 164 4.50e-33 135
MS.gene34420.t1 MTR_7g081420 41.117 394 210 11 207 587 400 784 4.63e-78 263
MS.gene34420.t1 MTR_7g081420 42.647 136 73 3 38 169 73 207 3.89e-23 104
MS.gene34420.t1 MTR_8g024380 37.037 432 232 14 174 590 355 761 1.79e-77 261
MS.gene34420.t1 MTR_8g024380 37.912 182 105 3 1 177 34 212 2.67e-34 139
MS.gene34420.t1 MTR_7g081580 41.885 382 204 10 217 587 409 783 2.80e-77 261
MS.gene34420.t1 MTR_7g081580 43.066 137 73 3 38 170 73 208 7.09e-23 103
MS.gene34420.t1 MTR_4g053635 38.028 426 235 13 169 585 265 670 3.53e-77 258
MS.gene34420.t1 MTR_4g053635 47.826 115 58 1 56 170 2 114 7.12e-24 106
MS.gene34420.t1 MTR_2g049200 35.915 426 237 11 174 588 356 756 1.97e-75 255
MS.gene34420.t1 MTR_2g049200 37.714 175 99 4 1 170 33 202 2.10e-29 124
MS.gene34420.t1 MTR_8g083220 38.389 422 236 9 172 587 371 774 7.62e-74 251
MS.gene34420.t1 MTR_8g083220 39.024 164 91 4 17 178 62 218 8.52e-26 112
MS.gene34420.t1 MTR_7g079300 36.580 421 243 12 176 587 360 765 3.09e-73 249
MS.gene34420.t1 MTR_7g079300 35.754 179 104 3 1 171 34 209 4.16e-31 129
MS.gene34420.t1 MTR_5g096750 37.442 430 236 11 169 587 357 764 3.18e-73 249
MS.gene34420.t1 MTR_5g096750 43.210 162 81 5 17 170 53 211 1.44e-29 124
MS.gene34420.t1 MTR_1g079120 37.264 424 241 10 174 587 352 760 1.32e-72 248
MS.gene34420.t1 MTR_1g079120 36.702 188 109 4 1 184 38 219 1.11e-32 134
MS.gene34420.t1 MTR_7g481600 39.765 425 230 13 178 587 370 783 2.81e-72 248
MS.gene34420.t1 MTR_7g481600 43.066 137 73 3 38 170 73 208 9.97e-23 103
MS.gene34420.t1 MTR_7g081380 37.665 454 235 17 169 587 366 806 3.07e-72 248
MS.gene34420.t1 MTR_7g081380 40.580 138 77 3 36 169 71 207 2.08e-22 102
MS.gene34420.t1 MTR_7g079310 35.461 423 246 11 176 587 357 763 5.58e-72 246
MS.gene34420.t1 MTR_7g079310 33.333 201 123 4 1 193 34 231 3.41e-30 126
MS.gene34420.t1 MTR_7g081500 39.295 397 212 11 207 587 399 782 1.68e-71 245
MS.gene34420.t1 MTR_7g081500 40.580 138 77 3 36 169 70 206 1.75e-22 102
MS.gene34420.t1 MTR_7g034380 37.947 419 228 13 176 587 298 691 3.84e-71 242
MS.gene34420.t1 MTR_7g034380 40.373 161 80 4 36 188 28 180 1.62e-28 121
MS.gene34420.t1 MTR_8g005710 37.500 424 229 13 176 590 305 701 2.19e-70 240
MS.gene34420.t1 MTR_8g005710 37.705 183 86 7 22 188 17 187 2.66e-24 108
MS.gene34420.t1 MTR_7g118080 35.455 440 239 13 165 590 350 758 1.67e-68 236
MS.gene34420.t1 MTR_7g118080 36.842 171 104 2 1 170 36 203 1.97e-29 124
MS.gene34420.t1 MTR_3g104930 37.674 430 245 13 172 588 343 762 1.80e-68 236
MS.gene34420.t1 MTR_3g104930 41.985 131 73 1 37 164 60 190 3.42e-28 120
MS.gene34420.t1 MTR_8g033150 37.442 430 229 14 174 591 326 727 5.27e-68 234
MS.gene34420.t1 MTR_8g033150 42.254 142 73 4 23 164 40 172 2.59e-23 105
MS.gene34420.t1 MTR_8g033150 37.442 430 229 14 174 591 353 754 6.69e-68 234
MS.gene34420.t1 MTR_8g033150 42.254 142 73 4 23 164 67 199 2.52e-23 105
MS.gene34420.t1 MTR_1g006990 39.019 428 220 17 176 590 338 737 4.70e-67 232
MS.gene34420.t1 MTR_1g006990 40.606 165 81 5 33 188 64 220 7.84e-28 119
MS.gene34420.t1 MTR_1g007030 38.588 425 224 16 176 590 338 735 5.31e-67 232
MS.gene34420.t1 MTR_1g007030 40.000 165 82 5 33 188 64 220 1.78e-28 121
MS.gene34420.t1 MTR_3g114420 37.813 439 242 14 169 590 343 767 3.57e-66 230
MS.gene34420.t1 MTR_3g114420 40.310 129 76 1 37 164 66 194 3.45e-27 117
MS.gene34420.t1 MTR_8g079900 36.683 398 226 10 197 587 265 643 8.93e-66 227
MS.gene34420.t1 MTR_8g079900 40.566 106 55 4 70 174 4 102 4.50e-13 72.4
MS.gene34420.t1 MTR_8g079900 36.683 398 226 10 197 587 363 741 1.67e-65 228
MS.gene34420.t1 MTR_8g079900 42.029 138 72 4 38 174 70 200 3.44e-22 101
MS.gene34420.t1 MTR_7g104200 37.063 429 238 14 169 587 335 741 3.90e-65 227
MS.gene34420.t1 MTR_7g104200 43.478 138 69 4 29 164 57 187 1.00e-24 109
MS.gene34420.t1 MTR_1g048110 36.574 432 231 16 172 590 332 733 5.06e-65 226
MS.gene34420.t1 MTR_1g048110 42.767 159 75 4 38 188 70 220 4.54e-30 126
MS.gene34420.t1 MTR_6g055570 37.882 425 218 17 176 587 338 729 3.38e-63 221
MS.gene34420.t1 MTR_6g055570 44.138 145 72 4 35 179 67 202 9.77e-30 125
MS.gene34420.t1 MTR_8g024370 35.035 431 240 12 174 588 351 757 3.41e-63 222
MS.gene34420.t1 MTR_8g024370 39.766 171 93 3 1 170 33 194 1.04e-34 140
MS.gene34420.t1 MTR_8g027260 41.026 312 156 8 289 590 361 654 1.51e-62 218
MS.gene34420.t1 MTR_8g027260 40.741 162 79 5 35 188 67 219 7.30e-27 115
MS.gene34420.t1 MTR_7g075890 34.813 428 243 13 174 591 499 900 1.44e-61 219
MS.gene34420.t1 MTR_7g075890 44.882 127 63 3 38 164 226 345 1.45e-23 106
MS.gene34420.t1 MTR_3g464790 36.952 433 232 14 172 588 325 732 3.64e-59 210
MS.gene34420.t1 MTR_3g464790 30.657 137 73 4 37 173 65 179 6.84e-13 72.0
MS.gene34420.t1 MTR_8g006680 34.651 430 228 17 176 591 336 726 5.15e-59 210
MS.gene34420.t1 MTR_8g006680 41.463 164 84 5 38 198 68 222 2.11e-27 117
MS.gene34420.t1 MTR_8g005300 34.651 430 228 17 176 591 336 726 5.15e-59 210
MS.gene34420.t1 MTR_8g005300 41.463 164 84 5 38 198 68 222 2.11e-27 117
MS.gene34420.t1 MTR_8g005640 34.651 430 228 17 176 591 336 726 5.15e-59 210
MS.gene34420.t1 MTR_8g005640 41.463 164 84 5 38 198 68 222 2.11e-27 117
MS.gene34420.t1 MTR_3g010080 35.011 437 231 19 172 590 333 734 7.79e-59 209
MS.gene34420.t1 MTR_3g010080 40.323 186 95 7 13 196 45 216 7.45e-29 122
MS.gene34420.t1 MTR_2g042650 35.294 425 218 17 174 587 264 642 1.15e-58 207
MS.gene34420.t1 MTR_6g055410 35.492 417 221 14 176 587 338 711 3.49e-58 207
MS.gene34420.t1 MTR_6g055410 42.958 142 72 4 38 179 70 202 1.09e-28 121
MS.gene34420.t1 MTR_6g075370 42.586 263 139 5 315 576 424 675 7.90e-57 203
MS.gene34420.t1 MTR_6g075370 39.161 143 74 4 29 169 58 189 4.23e-23 104
MS.gene34420.t1 MTR_2g042640 36.528 386 166 17 174 545 285 605 1.29e-49 182
MS.gene34420.t1 MTR_2g042640 40.789 152 74 4 45 188 46 189 1.97e-25 111
MS.gene34420.t1 MTR_2g044630 33.568 426 222 20 174 587 329 705 8.36e-46 172
MS.gene34420.t1 MTR_2g044630 38.994 159 79 6 38 196 70 210 5.78e-22 100
MS.gene34420.t1 MTR_3g452290 31.663 439 171 17 174 590 240 571 4.67e-44 166
MS.gene34420.t1 MTR_3g452290 39.535 129 60 5 69 188 3 122 1.55e-19 92.8
MS.gene34420.t1 MTR_3g451220 31.663 439 171 17 174 590 240 571 4.67e-44 166
MS.gene34420.t1 MTR_3g451220 39.535 129 60 5 69 188 3 122 1.55e-19 92.8
MS.gene34420.t1 MTR_8g042710 43.568 241 124 6 174 407 350 585 3.48e-43 164
MS.gene34420.t1 MTR_8g042710 44.030 134 66 3 37 164 58 188 2.46e-28 120
MS.gene34420.t1 MTR_2g037850 31.347 453 252 20 174 585 377 811 6.18e-43 165
MS.gene34420.t1 MTR_2g037850 29.940 167 105 3 42 197 90 255 1.74e-12 70.9
MS.gene34420.t1 MTR_4g127480 37.838 296 152 11 313 591 537 817 7.88e-43 164
MS.gene34420.t1 MTR_4g127480 34.921 126 77 3 42 164 90 213 1.97e-12 70.9
MS.gene34420.t1 MTR_4g126230 41.827 208 102 5 315 517 55 248 1.70e-40 148
MS.gene34420.t1 MTR_3g114140 34.030 335 188 10 230 548 105 422 2.29e-40 152
MS.gene34420.t1 MTR_4g071560 40.316 253 126 8 169 407 279 520 1.66e-38 149
MS.gene34420.t1 MTR_8g089230 30.296 406 224 16 223 587 458 845 1.39e-37 149
MS.gene34420.t1 MTR_4g132620 34.602 289 163 10 315 591 542 816 2.21e-36 145
MS.gene34420.t1 MTR_4g132620 29.375 160 107 2 12 171 67 220 3.15e-13 73.2
MS.gene34420.t1 MTR_3g114410 39.669 242 133 6 172 407 347 581 5.99e-36 142
MS.gene34420.t1 MTR_3g114410 36.957 184 110 3 37 215 66 248 4.68e-29 122
MS.gene34420.t1 MTR_2g046740 33.448 290 167 10 315 589 562 840 1.38e-33 137
MS.gene34420.t1 MTR_2g046740 33.775 151 92 3 17 164 89 234 1.46e-15 80.9
MS.gene34420.t1 MTR_4g053665 35.433 254 116 9 334 585 1 208 1.96e-32 124
MS.gene34420.t1 MTR_2g070260 37.931 203 112 7 375 574 1 192 5.06e-32 123
MS.gene34420.t1 MTR_5g044060 47.826 138 67 3 303 437 1 136 7.28e-32 122
MS.gene34420.t1 MTR_7g079295 33.503 197 121 3 1 190 34 227 3.06e-30 125
MS.gene34420.t1 MTR_7g079295 39.130 161 92 3 430 587 352 509 1.49e-26 114
MS.gene34420.t1 MTR_3g005755 82.192 73 12 1 365 436 236 308 3.48e-30 120
MS.gene34420.t1 MTR_5g081130 35.870 184 106 4 404 587 1 172 4.76e-22 94.7
MS.gene34420.t1 MTR_7g097250 31.797 217 107 5 176 392 1 176 4.78e-22 94.0
MS.gene34420.t1 MTR_8g027660 30.769 195 107 4 399 590 80 249 3.49e-21 93.6
MS.gene34420.t1 MTR_5g081100 41.353 133 48 3 35 167 32 134 1.97e-20 94.7
MS.gene34420.t1 MTR_4g118440 28.112 249 127 7 333 578 1 200 3.97e-20 89.7
MS.gene34420.t1 MTR_3g114160 42.056 107 59 1 36 142 2 105 5.54e-20 92.4
MS.gene34420.t1 MTR_5g011300 51.613 93 28 3 375 459 1 84 9.52e-20 84.7
MS.gene34420.t1 MTR_7g081660 37.297 185 108 5 405 587 374 552 4.39e-19 91.3
MS.gene34420.t1 MTR_8g092940 42.241 116 56 5 41 156 28 132 1.01e-17 83.2
MS.gene34420.t1 MTR_5g081280 38.060 134 60 5 35 168 52 162 9.46e-16 78.6
MS.gene34420.t1 MTR_3g114400 31.395 172 94 7 423 588 10 163 2.31e-13 68.6
MS.gene34420.t1 MTR_3g065240 31.868 182 84 5 224 404 81 223 7.81e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34420.t1 AT5G51750 68.349 436 135 2 159 593 347 780 0.0 625
MS.gene34420.t1 AT5G51750 63.584 173 58 3 1 172 41 209 9.82e-63 221
MS.gene34420.t1 AT2G05920 50.718 418 195 4 175 589 342 751 1.93e-138 421
MS.gene34420.t1 AT2G05920 39.683 189 82 4 1 181 34 198 1.36e-33 137
MS.gene34420.t1 AT5G67360 50.600 417 196 6 176 589 347 756 8.63e-132 403
MS.gene34420.t1 AT5G67360 41.765 170 86 2 1 170 36 192 5.68e-42 162
MS.gene34420.t1 AT3G14240 48.276 435 210 6 173 593 342 775 2.13e-130 400
MS.gene34420.t1 AT3G14240 41.765 170 88 2 1 170 32 190 2.07e-33 136
MS.gene34420.t1 AT4G34980 47.836 439 216 6 159 590 329 761 1.51e-127 392
MS.gene34420.t1 AT4G34980 43.275 171 80 2 1 171 32 185 4.75e-40 156
MS.gene34420.t1 AT3G14067 46.759 432 210 8 169 589 347 769 2.91e-117 366
MS.gene34420.t1 AT3G14067 43.452 168 84 2 1 168 37 193 4.61e-37 147
MS.gene34420.t1 AT2G04160 43.192 426 225 9 169 587 355 770 1.44e-104 333
MS.gene34420.t1 AT2G04160 45.185 135 71 2 39 171 73 206 1.08e-28 122
MS.gene34420.t1 AT1G04110 43.294 425 223 7 174 588 355 771 1.67e-102 328
MS.gene34420.t1 AT1G04110 43.939 132 73 1 40 171 70 200 5.24e-29 123
MS.gene34420.t1 AT1G01900 44.681 423 220 7 174 589 358 773 4.49e-102 327
MS.gene34420.t1 AT1G01900 38.012 171 99 3 4 170 38 205 4.81e-28 120
MS.gene34420.t1 AT5G59810 40.476 420 232 9 174 587 367 774 1.56e-88 291
MS.gene34420.t1 AT5G59810 36.471 170 99 3 7 174 53 215 6.30e-24 107
MS.gene34420.t1 AT5G45650 40.376 426 224 8 176 588 381 789 4.45e-84 279
MS.gene34420.t1 AT5G45650 39.665 179 83 4 10 169 40 212 1.43e-30 127
MS.gene34420.t1 AT5G45650 40.376 426 224 8 176 588 381 789 4.45e-84 279
MS.gene34420.t1 AT5G45650 39.665 179 83 4 10 169 40 212 1.43e-30 127
MS.gene34420.t1 AT4G00230 39.120 432 220 14 174 591 344 746 1.76e-76 258
MS.gene34420.t1 AT4G00230 48.062 129 60 3 38 166 71 192 1.52e-25 112
MS.gene34420.t1 AT5G59090 37.529 429 232 12 172 590 329 731 4.73e-73 248
MS.gene34420.t1 AT5G59090 44.094 127 65 2 38 164 66 186 3.40e-26 114
MS.gene34420.t1 AT5G59090 37.529 429 232 12 172 590 327 729 4.76e-73 248
MS.gene34420.t1 AT5G59090 46.457 127 60 4 38 164 66 184 6.44e-26 113
MS.gene34420.t1 AT5G59100 37.705 427 232 13 174 590 338 740 4.83e-72 246
MS.gene34420.t1 AT5G59100 39.103 156 89 2 38 193 68 217 2.45e-25 111
MS.gene34420.t1 AT5G59090 37.762 429 226 13 172 590 329 726 1.85e-71 244
MS.gene34420.t1 AT5G59090 44.094 127 65 2 38 164 66 186 3.06e-26 114
MS.gene34420.t1 AT5G59120 37.500 424 233 11 172 587 328 727 2.20e-71 244
MS.gene34420.t1 AT5G59120 40.741 135 74 2 30 164 57 185 6.82e-25 110
MS.gene34420.t1 AT1G20160 37.674 430 244 13 172 588 305 723 1.41e-70 241
MS.gene34420.t1 AT1G20160 44.444 126 68 1 41 164 28 153 7.77e-29 122
MS.gene34420.t1 AT1G20160 37.674 430 244 13 172 588 344 762 1.90e-70 242
MS.gene34420.t1 AT1G20160 44.444 126 68 1 41 164 67 192 9.04e-29 122
MS.gene34420.t1 AT3G46850 39.716 423 222 14 172 587 338 734 1.66e-67 233
MS.gene34420.t1 AT3G46850 33.761 234 142 6 38 266 67 292 1.07e-23 106
MS.gene34420.t1 AT4G26330 40.179 336 190 6 259 587 390 721 1.56e-66 231
MS.gene34420.t1 AT4G26330 42.754 138 75 4 35 169 15 151 7.62e-27 116
MS.gene34420.t1 AT4G26330 40.179 336 190 6 259 587 404 735 1.82e-66 231
MS.gene34420.t1 AT4G26330 38.816 152 75 5 35 169 15 165 9.52e-24 106
MS.gene34420.t1 AT5G58840 36.190 420 219 12 172 587 332 706 2.31e-66 230
MS.gene34420.t1 AT5G58840 42.963 135 71 2 30 164 61 189 3.56e-28 120
MS.gene34420.t1 AT5G59190 37.237 427 234 15 174 592 293 693 4.50e-66 229
MS.gene34420.t1 AT5G59190 42.857 133 68 2 41 173 32 156 1.99e-26 114
MS.gene34420.t1 AT1G20150 37.440 414 222 13 198 588 372 771 3.67e-65 228
MS.gene34420.t1 AT1G20150 38.554 166 85 6 42 193 66 228 3.40e-24 108
MS.gene34420.t1 AT5G58820 36.019 422 217 11 172 587 326 700 7.31e-64 223
MS.gene34420.t1 AT5G58820 43.609 133 69 2 30 162 55 181 1.52e-27 118
MS.gene34420.t1 AT5G67090 35.714 406 226 10 179 577 339 716 3.26e-63 221
MS.gene34420.t1 AT5G67090 40.000 170 87 3 1 170 29 183 6.10e-32 132
MS.gene34420.t1 AT4G10520 36.580 421 236 10 172 587 350 744 2.27e-61 217
MS.gene34420.t1 AT4G10520 41.718 163 78 5 11 170 48 196 1.00e-28 122
MS.gene34420.t1 AT3G46840 37.736 424 228 15 172 587 339 734 4.14e-61 216
MS.gene34420.t1 AT3G46840 37.241 145 82 3 38 179 68 206 8.95e-23 103
MS.gene34420.t1 AT1G32970 36.643 423 242 11 172 587 319 722 4.93e-61 216
MS.gene34420.t1 AT5G58830 36.085 424 215 13 172 587 330 705 1.47e-60 214
MS.gene34420.t1 AT5G58830 39.259 135 76 2 30 164 59 187 1.33e-24 109
MS.gene34420.t1 AT5G59130 34.651 430 238 14 169 587 289 686 3.50e-60 213
MS.gene34420.t1 AT5G59130 37.805 164 91 3 30 193 22 174 3.39e-25 110
MS.gene34420.t1 AT5G59130 34.651 430 238 14 169 587 324 721 6.33e-60 213
MS.gene34420.t1 AT5G59130 37.195 164 88 4 30 193 61 209 5.41e-23 104
MS.gene34420.t1 AT4G10510 36.697 436 225 14 172 587 290 694 6.36e-60 212
MS.gene34420.t1 AT4G10510 42.308 130 74 1 41 170 1 129 4.83e-28 119
MS.gene34420.t1 AT5G59130 34.651 430 238 14 169 587 328 725 7.92e-60 212
MS.gene34420.t1 AT5G59130 37.805 164 91 3 30 193 61 213 4.81e-25 110
MS.gene34420.t1 AT4G10510 36.636 434 228 13 172 587 305 709 8.45e-60 212
MS.gene34420.t1 AT4G10510 42.308 130 74 1 41 170 16 144 5.78e-28 119
MS.gene34420.t1 AT4G10510 36.636 434 228 13 172 587 361 765 1.63e-59 212
MS.gene34420.t1 AT4G10510 42.308 130 74 1 41 170 72 200 6.67e-28 119
MS.gene34420.t1 AT4G10510 36.636 434 228 13 172 587 349 753 1.84e-59 212
MS.gene34420.t1 AT4G10510 42.308 130 74 1 41 170 60 188 7.48e-28 119
MS.gene34420.t1 AT1G32950 35.731 431 238 13 171 587 305 710 4.27e-59 210
MS.gene34420.t1 AT1G32950 43.382 136 76 1 35 170 10 144 9.81e-31 128
MS.gene34420.t1 AT5G03620 36.878 442 229 16 172 587 341 758 6.68e-59 210
MS.gene34420.t1 AT5G03620 46.667 135 66 2 39 173 70 198 1.13e-25 112
MS.gene34420.t1 AT1G32950 35.897 429 240 13 171 587 356 761 8.11e-59 210
MS.gene34420.t1 AT1G32950 43.382 136 76 1 35 170 61 195 1.22e-30 128
MS.gene34420.t1 AT4G10550 35.664 429 240 12 171 587 306 710 1.12e-58 209
MS.gene34420.t1 AT4G10550 45.185 135 73 1 36 170 11 144 6.30e-32 131
MS.gene34420.t1 AT4G10550 35.664 429 240 12 171 587 306 710 1.12e-58 209
MS.gene34420.t1 AT4G10550 45.185 135 73 1 36 170 11 144 6.30e-32 131
MS.gene34420.t1 AT1G32960 36.085 424 244 12 172 587 361 765 1.98e-58 209
MS.gene34420.t1 AT1G32960 42.963 135 76 1 36 170 65 198 1.92e-30 127
MS.gene34420.t1 AT5G59130 34.884 430 227 15 169 587 328 715 2.19e-58 208
MS.gene34420.t1 AT5G59130 37.805 164 91 3 30 193 61 213 4.25e-25 110
MS.gene34420.t1 AT4G10550 35.664 429 240 12 171 587 378 782 2.32e-58 209
MS.gene34420.t1 AT4G10550 44.203 138 76 1 36 173 83 219 9.32e-32 131
MS.gene34420.t1 AT1G32940 35.308 422 250 10 172 587 307 711 2.67e-58 208
MS.gene34420.t1 AT1G32940 42.667 150 79 2 21 170 2 144 1.42e-31 130
MS.gene34420.t1 AT1G32940 35.308 422 250 10 172 587 307 711 2.67e-58 208
MS.gene34420.t1 AT1G32940 42.667 150 79 2 21 170 2 144 1.42e-31 130
MS.gene34420.t1 AT4G10550 35.831 427 242 12 171 587 362 766 2.86e-58 209
MS.gene34420.t1 AT4G10550 44.203 138 76 1 36 173 67 203 8.63e-32 131
MS.gene34420.t1 AT1G32940 35.308 422 250 10 172 587 358 762 6.34e-58 207
MS.gene34420.t1 AT1G32940 40.881 159 91 2 15 173 43 198 9.12e-32 131
MS.gene34420.t1 AT5G45640 34.192 427 252 10 174 588 343 752 1.67e-56 203
MS.gene34420.t1 AT5G45640 35.032 157 72 5 37 169 26 176 2.49e-19 92.8
MS.gene34420.t1 AT5G11940 34.679 421 238 11 172 587 364 752 9.91e-56 201
MS.gene34420.t1 AT5G11940 43.511 131 70 3 36 164 70 198 5.64e-27 116
MS.gene34420.t1 AT4G10540 35.211 426 245 13 172 587 359 763 1.98e-55 201
MS.gene34420.t1 AT4G10540 45.385 130 70 1 41 170 68 196 1.65e-29 124
MS.gene34420.t1 AT1G66220 34.225 374 217 8 219 587 395 744 1.75e-53 195
MS.gene34420.t1 AT1G66220 42.336 137 77 2 38 173 72 207 3.89e-27 117
MS.gene34420.t1 AT4G21650 36.657 341 193 7 254 587 436 760 2.41e-53 194
MS.gene34420.t1 AT4G21650 38.710 155 85 4 27 171 63 217 5.93e-25 110
MS.gene34420.t1 AT4G10530 33.254 421 237 9 172 587 354 735 4.10e-53 194
MS.gene34420.t1 AT4G10530 30.904 343 168 11 11 336 48 338 1.44e-29 124
MS.gene34420.t1 AT1G66210 35.342 365 208 8 229 587 408 750 1.12e-50 187
MS.gene34420.t1 AT1G66210 38.462 143 87 1 39 181 76 217 2.60e-24 108
MS.gene34420.t1 AT4G21630 36.765 340 194 8 254 587 429 753 2.47e-50 186
MS.gene34420.t1 AT4G21630 35.897 195 100 6 7 192 52 230 3.63e-25 110
MS.gene34420.t1 AT4G21640 38.762 307 169 8 286 587 435 727 9.28e-50 184
MS.gene34420.t1 AT4G21640 36.364 176 94 5 29 192 65 234 8.84e-24 106
MS.gene34420.t1 AT4G21323 31.591 421 248 12 171 585 405 791 4.96e-48 180
MS.gene34420.t1 AT4G21323 36.301 146 92 1 38 182 115 260 5.09e-23 104
MS.gene34420.t1 AT4G21326 31.713 432 247 12 162 587 298 687 1.44e-46 174
MS.gene34420.t1 AT4G21326 40.602 133 77 2 38 169 13 144 1.66e-27 118
MS.gene34420.t1 AT4G15040 33.753 397 232 11 198 587 313 685 3.80e-46 173
MS.gene34420.t1 AT4G15040 37.968 187 98 5 22 202 17 191 3.20e-28 120
MS.gene34420.t1 AT4G15040 33.753 397 232 11 198 587 313 685 3.80e-46 173
MS.gene34420.t1 AT4G15040 37.968 187 98 5 22 202 17 191 3.20e-28 120
MS.gene34420.t1 AT4G30020 29.425 452 265 15 174 586 374 810 2.70e-45 172
MS.gene34420.t1 AT4G30020 34.646 127 77 3 42 164 86 210 2.21e-11 67.4
MS.gene34420.t1 AT4G30020 29.425 452 265 15 174 586 374 810 2.70e-45 172
MS.gene34420.t1 AT4G30020 34.646 127 77 3 42 164 86 210 2.21e-11 67.4
MS.gene34420.t1 AT4G30020 29.425 452 265 15 174 586 374 810 2.70e-45 172
MS.gene34420.t1 AT4G30020 34.646 127 77 3 42 164 86 210 2.21e-11 67.4
MS.gene34420.t1 AT4G30020 29.425 452 265 15 174 586 374 810 2.70e-45 172
MS.gene34420.t1 AT4G30020 34.646 127 77 3 42 164 86 210 2.21e-11 67.4
MS.gene34420.t1 AT2G19170 28.855 454 265 15 174 586 373 809 6.88e-43 165
MS.gene34420.t1 AT2G19170 33.121 157 93 4 18 164 55 209 1.37e-14 77.8
MS.gene34420.t1 AT2G19170 28.855 454 265 15 174 586 373 809 6.88e-43 165
MS.gene34420.t1 AT2G19170 33.121 157 93 4 18 164 55 209 1.37e-14 77.8
MS.gene34420.t1 AT4G00230 40.664 241 121 7 174 407 344 569 5.76e-42 160
MS.gene34420.t1 AT4G00230 48.062 129 60 3 38 166 71 192 1.22e-25 112
MS.gene34420.t1 AT1G62340 32.419 401 218 15 223 587 446 829 1.06e-39 155
MS.gene34420.t1 AT1G62340 34.783 138 81 4 42 171 98 234 5.45e-13 72.8
MS.gene34420.t1 AT2G39850 34.708 291 157 11 316 587 489 765 2.74e-38 151
MS.gene34420.t1 AT2G39850 34.848 132 73 3 34 165 58 176 2.22e-12 70.5
MS.gene34420.t1 AT1G30600 30.597 402 237 14 222 589 435 828 2.87e-38 151
MS.gene34420.t1 AT1G30600 36.508 126 76 3 42 164 98 222 1.58e-13 74.3
MS.gene34420.t1 AT5G44530 30.750 400 230 16 223 587 446 833 5.08e-38 150
MS.gene34420.t1 AT5G44530 36.508 126 76 2 42 164 106 230 1.19e-15 81.3
MS.gene34420.t1 AT1G32980 42.781 187 101 3 371 556 3 184 1.33e-37 138
MS.gene34420.t1 AT4G20430 31.281 406 226 20 221 588 459 849 2.66e-35 142
MS.gene34420.t1 AT4G20430 33.858 127 79 3 42 164 119 244 2.12e-13 73.9
MS.gene34420.t1 AT4G20430 31.281 406 226 20 221 588 459 849 2.66e-35 142
MS.gene34420.t1 AT4G20430 33.858 127 79 3 42 164 119 244 2.12e-13 73.9
MS.gene34420.t1 AT4G20430 35.052 291 158 13 315 588 549 825 9.45e-35 140
MS.gene34420.t1 AT4G20430 33.858 127 79 3 42 164 119 244 1.97e-13 73.9
MS.gene34420.t1 AT5G58840 38.819 237 108 8 172 407 332 532 1.24e-34 138
MS.gene34420.t1 AT5G58840 42.963 135 71 2 30 164 61 189 1.97e-28 120
MS.gene34420.t1 AT5G44530 29.412 425 228 18 223 587 446 858 7.97e-34 138
MS.gene34420.t1 AT5G44530 36.508 126 76 2 42 164 106 230 1.30e-15 80.9
MS.gene34420.t1 AT5G03620 39.592 245 130 7 172 407 341 576 6.89e-33 133
MS.gene34420.t1 AT5G03620 46.667 135 66 2 39 173 70 198 5.62e-26 112
MS.gene34420.t1 AT1G32940 40.881 159 91 2 15 173 43 198 5.81e-32 131
MS.gene34420.t1 AT1G32940 35.317 252 146 7 172 418 358 597 1.58e-25 111
MS.gene34420.t1 AT1G20160 44.444 126 68 1 41 164 67 192 7.92e-29 121
MS.gene34420.t1 AT1G20160 33.333 171 101 6 172 335 344 508 6.08e-11 65.9
MS.gene34420.t1 AT5G58840 42.963 135 71 2 30 164 61 189 1.41e-28 119
MS.gene34420.t1 AT5G59110 35.185 162 98 3 431 587 7 166 4.95e-23 96.7
MS.gene34420.t1 AT5G44530 36.508 126 76 2 42 164 106 230 1.50e-15 80.5

Find 107 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGTTACACCATTTAA+AGG 0.178184 1.2:-76180869 MS.gene34420:CDS
GCTGCTTGGAGTGGACTTAC+TGG 0.235422 1.2:-76181406 MS.gene34420:CDS
CACACCAAACCTCCAAATTC+TGG 0.235592 1.2:+76180746 None:intergenic
GTGAAACTGGTAGGGGATTC+AGG 0.259246 1.2:-76182955 MS.gene34420:CDS
TGTAACAATGACATGATATT+TGG 0.274740 1.2:+76180880 None:intergenic
TTAACAACAGCGCCTTTAAA+TGG 0.275106 1.2:+76180857 None:intergenic
GAGTCTTGGACACTGGTATT+TGG 0.277631 1.2:-76183042 MS.gene34420:CDS
TGTAGTTGGTACTTTGTATC+AGG 0.278232 1.2:+76183160 None:intergenic
CTTGTAAAATTCAATGTATC+TGG 0.289773 1.2:+76180827 None:intergenic
AGGCAAAGTGAACCAGAATT+TGG 0.295595 1.2:-76180758 MS.gene34420:CDS
TTAACCCTTCTATGATCTAT+TGG 0.295681 1.2:+76181370 None:intergenic
GTACTTTGTATCAGGGAATA+TGG 0.299507 1.2:+76183168 None:intergenic
GTTAAGTTTAACATACTTTC+CGG 0.306723 1.2:-76181352 MS.gene34420:CDS
GTGAATCGTTGAAGCAAAAT+TGG 0.317551 1.2:+76180934 None:intergenic
ATAGCAGCTGGACTCCATTC+AGG 0.318680 1.2:+76181271 None:intergenic
GGTTCAAGACCAAGGAAATA+TGG 0.331175 1.2:+76183124 None:intergenic
GTTTACCAATAGATCATAGA+AGG 0.337442 1.2:-76181375 MS.gene34420:CDS
ACACCAGGTGCTACTATATC+AGG 0.364343 1.2:+76181439 None:intergenic
ACAATACCCTTTGGTTTACA+TGG 0.367797 1.2:-76181851 MS.gene34420:CDS
GATGAAAATGCTGCTACTAT+AGG 0.369103 1.2:+76181499 None:intergenic
TAAATCAGTAGAAGCTGAAA+TGG 0.371819 1.2:-76183305 MS.gene34420:CDS
TGAACCAGAATTTGGAGGTT+TGG 0.376243 1.2:-76180750 MS.gene34420:CDS
TGATCTATTGGTAAACTTGA+TGG 0.377526 1.2:+76181382 None:intergenic
TCAGGAGCATCAATCTATAA+AGG 0.389240 1.2:-76181898 MS.gene34420:CDS
GAGGTTTGGTGTGGAAAGAT+AGG 0.390179 1.2:-76180736 MS.gene34420:CDS
CTTCTGTTGGTGTATTGAAT+TGG 0.390952 1.2:+76183103 None:intergenic
AGTGAGAGTTTCATTGATAC+AGG 0.401477 1.2:-76183013 MS.gene34420:CDS
AGGACATGACATTGAAGTTC+CGG 0.408580 1.2:+76181333 None:intergenic
ATTTCAAGTGTGAGTAAACT+TGG 0.411469 1.2:+76181469 None:intergenic
TGATCCAAGATCTTTGTGTT+TGG 0.414895 1.2:-76181809 MS.gene34420:CDS
CCTTCCAAACACAAAGATCT+TGG 0.423780 1.2:+76181805 None:intergenic
TTCAATACACCAACAGAAGC+TGG 0.424868 1.2:-76183099 MS.gene34420:CDS
GACTTCTTGTTGTGTGTAGT+TGG 0.425321 1.2:+76183146 None:intergenic
AATTAGTCCAAGAGTGCAAA+AGG 0.429857 1.2:-76181731 MS.gene34420:CDS
TTTGTGTTTGGAAGGTACTT+TGG 0.430850 1.2:-76181797 MS.gene34420:CDS
GCAGAAGAAGCATCTCTAAG+AGG 0.432819 1.2:+76181199 None:intergenic
AAGATTGTGATTTGTGATAG+AGG 0.446697 1.2:-76181754 MS.gene34420:CDS
CCTAGAAAAGCTCTTGATCC+AGG 0.449023 1.2:-76181133 MS.gene34420:CDS
TGGAAAGGTGCATGTGAAAC+TGG 0.450416 1.2:-76182968 MS.gene34420:CDS
ATAGTTGGAGTCTTGGACAC+TGG 0.453634 1.2:-76183049 MS.gene34420:CDS
AGTTAGAAAACAATACCCTT+TGG 0.454153 1.2:-76181860 MS.gene34420:CDS
GGCATATAAGTTATCACAAT+CGG 0.458305 1.2:+76180695 None:intergenic
CACTGCAATAAGAAGATTGT+AGG 0.458318 1.2:-76182926 MS.gene34420:CDS
TGATGTTATAGTTGGAGTCT+TGG 0.459644 1.2:-76183056 MS.gene34420:CDS
GCAGATGTTAGCCTTGGAAA+TGG 0.460229 1.2:-76181931 MS.gene34420:intron
CCTTTCCAGTGAGAAGGTAC+TGG 0.468930 1.2:+76182983 None:intergenic
TCAGTTTCAAAGTGACATCT+AGG 0.470839 1.2:-76180778 MS.gene34420:CDS
GTGTGAACATTCTTGCTGCT+TGG 0.471231 1.2:-76181420 MS.gene34420:CDS
TGGTGACTGGAAAAGATGTC+TGG 0.471958 1.2:+76183364 None:intergenic
CTTACAAACACTGCAGCAAA+TGG 0.472737 1.2:-76181670 MS.gene34420:CDS
TTTCCTGCAGATGTTAGCCT+TGG 0.473741 1.2:-76181937 MS.gene34420:intron
GCTAACCATGATGTTATAGT+TGG 0.475358 1.2:-76183064 MS.gene34420:CDS
AACATTCTTGCTGCTTGGAG+TGG 0.477323 1.2:-76181415 MS.gene34420:CDS
ATGTCATGTCCTCATGTAAG+TGG 0.481265 1.2:-76181322 MS.gene34420:CDS
CTGTTGCTGCTTCATATCCA+TGG 0.481970 1.2:+76182888 None:intergenic
CATGGATATGAAGCAGCAAC+AGG 0.490558 1.2:-76182887 MS.gene34420:intron
CCAAGATCTTTGTGTTTGGA+AGG 0.493533 1.2:-76181805 MS.gene34420:CDS
AGTATATGATATCGAACCTC+AGG 0.493737 1.2:-76181107 MS.gene34420:CDS
TGGCCAGCACCATGATCATA+AGG 0.495707 1.2:+76181163 None:intergenic
ATCGTTGAAGCAAAATTGGT+TGG 0.497574 1.2:+76180938 None:intergenic
GGAAATGGAAGAAAATTCTC+AGG 0.500504 1.2:-76181916 MS.gene34420:CDS
TTGGATCGTCGAACTGTCAC+GGG 0.501662 1.2:-76181778 MS.gene34420:CDS
TCCAAGAGTGCAAAAGGGAC+AGG 0.505100 1.2:-76181725 MS.gene34420:CDS
ACAAGAAGTCCATATTTCCT+TGG 0.505491 1.2:-76183133 MS.gene34420:CDS
CACCGCACTGTTACCAATGT+TGG 0.506302 1.2:-76180914 MS.gene34420:CDS
AAACACAAAGATCTTGGATC+AGG 0.511063 1.2:+76181811 None:intergenic
CAGAATTTGGAGGTTTGGTG+TGG 0.515812 1.2:-76180745 MS.gene34420:CDS
CAAAGTGAACCAGAATTTGG+AGG 0.522433 1.2:-76180755 MS.gene34420:CDS
TTTGGATCGTCGAACTGTCA+CGG 0.527993 1.2:-76181779 MS.gene34420:CDS
TCAATGAAACTCTCACTCTC+AGG 0.530295 1.2:+76183019 None:intergenic
TCAAAGCTAAACATCCTGAA+TGG 0.530445 1.2:-76181285 MS.gene34420:CDS
ACACCTTATGATCATGGTGC+TGG 0.538752 1.2:-76181166 MS.gene34420:CDS
AGGTTTGGTGTGGAAAGATA+GGG 0.539280 1.2:-76180735 MS.gene34420:CDS
TGAATACCACTCTTGGTGAC+TGG 0.541249 1.2:+76183351 None:intergenic
AAGGTGCATGTGAAACTGGT+AGG 0.542313 1.2:-76182964 MS.gene34420:CDS
GGGGAAGAACCTCACATTGG+TGG 0.548428 1.2:+76180674 None:intergenic
GGAAACACAACTGATATAGC+AGG 0.548430 1.2:+76180968 None:intergenic
TGCTTCCCATGTAAACCAAA+GGG 0.549353 1.2:+76181845 None:intergenic
AGGTGCATGTGAAACTGGTA+GGG 0.554316 1.2:-76182963 MS.gene34420:CDS
TCGATATCATATACTAAACC+TGG 0.561273 1.2:+76181115 None:intergenic
ACATGATATTTGGAAACAGC+AGG 0.567192 1.2:+76180890 None:intergenic
TGAAACCAGTACCTTCTCAC+TGG 0.571834 1.2:-76182988 MS.gene34420:CDS
CAATACCCTTTGGTTTACAT+GGG 0.583889 1.2:-76181850 MS.gene34420:CDS
GGAAACAGCAGGACCAACAT+TGG 0.584506 1.2:+76180901 None:intergenic
CTACTGCTACTGCTGGAAGT+AGG 0.588254 1.2:+76181623 None:intergenic
GTAGTTGGTACTTTGTATCA+GGG 0.591469 1.2:+76183161 None:intergenic
TCAATACACCAACAGAAGCT+GGG 0.594006 1.2:-76183098 MS.gene34420:CDS
TTGCTTCCCATGTAAACCAA+AGG 0.598040 1.2:+76181844 None:intergenic
CTACTTCCAGCAGTAGCAGT+AGG 0.599375 1.2:-76181622 MS.gene34420:CDS
CATGCACCTTTCCAGTGAGA+AGG 0.602893 1.2:+76182977 None:intergenic
ATTAGTCCAAGAGTGCAAAA+GGG 0.604652 1.2:-76181730 MS.gene34420:CDS
TTTCAAGTGTGAGTAAACTT+GGG 0.606574 1.2:+76181470 None:intergenic
AATGCTGCTACTATAGGAGA+TGG 0.611627 1.2:+76181505 None:intergenic
TTTACCAATAGATCATAGAA+GGG 0.613414 1.2:-76181374 MS.gene34420:CDS
AGACTCCAACTATAACATCA+TGG 0.615813 1.2:+76183059 None:intergenic
ATTGAATTGGTTCAAGACCA+AGG 0.619459 1.2:+76183116 None:intergenic
CCAGTACCTTCTCACTGGAA+AGG 0.621307 1.2:-76182983 MS.gene34420:CDS
TCCTCATGTAAGTGGAATCG+CGG 0.624644 1.2:-76181314 MS.gene34420:CDS
GGTGCATGTGAAACTGGTAG+GGG 0.639627 1.2:-76182962 MS.gene34420:CDS
GCAGCAAGAATGTTCACACC+AGG 0.640405 1.2:+76181424 None:intergenic
ACTTATATGCCACCAATGTG+AGG 0.640673 1.2:-76180683 None:intergenic
AAACCTGATATAGTAGCACC+TGG 0.653822 1.2:-76181442 MS.gene34420:CDS
GGTGCAAGAATATTCTACCA+TGG 0.660702 1.2:-76182905 MS.gene34420:CDS
AGAAACTCAAAGTAATCCTG+AGG 0.669990 1.2:+76181091 None:intergenic
CTAGGGGAAGAACCTCACAT+TGG 0.682538 1.2:+76180671 None:intergenic
GCCGCGATTCCACTTACATG+AGG 0.688521 1.2:+76181313 None:intergenic
GACCAACATTGGTAACAGTG+CGG 0.756399 1.2:+76180912 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAACCATCTTTTATTTTTA+TGG - chr1.2:76181609-76181628 MS.gene34420:CDS 15.0%
!! AAAAAACTACTAATTCTGAA+GGG + chr1.2:76183020-76183039 None:intergenic 20.0%
!!! AAACATTTTTCATTCTTTCT+AGG + chr1.2:76181725-76181744 None:intergenic 20.0%
!!! CAAAATATTTTAGTAATACC+TGG + chr1.2:76181348-76181367 None:intergenic 20.0%
!!! CTTTTTTAAATTTTCCAATC+TGG + chr1.2:76181540-76181559 None:intergenic 20.0%
! AACATGAAGATAGTATTAGA+TGG + chr1.2:76181750-76181769 None:intergenic 25.0%
! AGTTCATATGAAAATGAAGA+AGG - chr1.2:76181409-76181428 MS.gene34420:CDS 25.0%
! CTTGTAAAATTCAATGTATC+TGG + chr1.2:76183243-76183262 None:intergenic 25.0%
! GAAAAAACTACTAATTCTGA+AGG + chr1.2:76183021-76183040 None:intergenic 25.0%
! GTTAAGTTTAACATACTTTC+CGG - chr1.2:76182715-76182734 MS.gene34420:intron 25.0%
! TGTAACAATGACATGATATT+TGG + chr1.2:76183190-76183209 None:intergenic 25.0%
! TTAACCATGCATTATCTTTA+TGG - chr1.2:76181676-76181695 MS.gene34420:CDS 25.0%
! TTTACCAATAGATCATAGAA+GGG - chr1.2:76182693-76182712 MS.gene34420:intron 25.0%
!! AATGTTTTATCCATCTCTTT+AGG - chr1.2:76181935-76181954 MS.gene34420:intron 25.0%
!!! CCATCTTTTATTTTTATGGA+CGG - chr1.2:76181613-76181632 MS.gene34420:CDS 25.0%
AAGCTACAGATAAACTATCA+TGG + chr1.2:76181982-76182001 None:intergenic 30.0%
AGCTACAGATAAACTATCAT+GGG + chr1.2:76181981-76182000 None:intergenic 30.0%
AGTTAGAAAACAATACCCTT+TGG - chr1.2:76182207-76182226 MS.gene34420:intron 30.0%
AGTTTATCTGTAGCTTCATT+TGG - chr1.2:76181986-76182005 MS.gene34420:intron 30.0%
CATCCATTATCTTTATGTAC+AGG - chr1.2:76181818-76181837 MS.gene34420:CDS 30.0%
CCGTCCATAAAAATAAAAGA+TGG + chr1.2:76181616-76181635 None:intergenic 30.0%
GGCATATAAGTTATCACAAT+CGG + chr1.2:76183375-76183394 None:intergenic 30.0%
GTCATTGTTACACCATTTAA+AGG - chr1.2:76183198-76183217 MS.gene34420:CDS 30.0%
GTTTACCAATAGATCATAGA+AGG - chr1.2:76182692-76182711 MS.gene34420:intron 30.0%
TAAATCAGTAGAAGCTGAAA+TGG - chr1.2:76180762-76180781 MS.gene34420:CDS 30.0%
TCGATATCATATACTAAACC+TGG + chr1.2:76182955-76182974 None:intergenic 30.0%
TGATCTATTGGTAAACTTGA+TGG + chr1.2:76182688-76182707 None:intergenic 30.0%
TGTTTAGTACAATTCCAGAT+TGG - chr1.2:76181523-76181542 MS.gene34420:CDS 30.0%
TTAACCCTTCTATGATCTAT+TGG + chr1.2:76182700-76182719 None:intergenic 30.0%
! AAGATTGTGATTTGTGATAG+AGG - chr1.2:76182313-76182332 MS.gene34420:intron 30.0%
! AGAATTTTCTTCCATTTCCA+AGG + chr1.2:76182150-76182169 None:intergenic 30.0%
! ATTTCAAGTGTGAGTAAACT+TGG + chr1.2:76182601-76182620 None:intergenic 30.0%
! GCTTTTCATAACACAAGATT+AGG - chr1.2:76182532-76182551 MS.gene34420:intron 30.0%
! TTTCAAGTGTGAGTAAACTT+GGG + chr1.2:76182600-76182619 None:intergenic 30.0%
! TTTTCAACACCTTATGATCA+TGG - chr1.2:76182895-76182914 MS.gene34420:CDS 30.0%
!! CTGTACATAAAGATAATGGA+TGG + chr1.2:76181820-76181839 None:intergenic 30.0%
!!! GAGCTTTTCTAGGATTAATA+TGG + chr1.2:76182927-76182946 None:intergenic 30.0%
AAACACAAAGATCTTGGATC+AGG + chr1.2:76182259-76182278 None:intergenic 35.0%
AAACATTTGTGAGACTGACA+GGG + chr1.2:76182066-76182085 None:intergenic 35.0%
AAATCACCAAGAGATCAAGA+TGG - chr1.2:76181228-76181247 MS.gene34420:CDS 35.0%
AATCTTCTTGGTTATGCCTA+TGG - chr1.2:76181303-76181322 MS.gene34420:CDS 35.0%
ACAAGAAGTCCATATTTCCT+TGG - chr1.2:76180934-76180953 MS.gene34420:CDS 35.0%
ACATGATATTTGGAAACAGC+AGG + chr1.2:76183180-76183199 None:intergenic 35.0%
AGAAACTCAAAGTAATCCTG+AGG + chr1.2:76182979-76182998 None:intergenic 35.0%
AGACTCCAACTATAACATCA+TGG + chr1.2:76181011-76181030 None:intergenic 35.0%
AGTATATGATATCGAACCTC+AGG - chr1.2:76182960-76182979 MS.gene34420:CDS 35.0%
AGTGAGAGTTTCATTGATAC+AGG - chr1.2:76181054-76181073 MS.gene34420:CDS 35.0%
ATCGTTGAAGCAAAATTGGT+TGG + chr1.2:76183132-76183151 None:intergenic 35.0%
CACTGCAATAAGAAGATTGT+AGG - chr1.2:76181141-76181160 MS.gene34420:CDS 35.0%
CTGTCCATAAAGATAATGCA+TGG + chr1.2:76181683-76181702 None:intergenic 35.0%
CTTCTGTTGGTGTATTGAAT+TGG + chr1.2:76180967-76180986 None:intergenic 35.0%
GATGAAAATGCTGCTACTAT+AGG + chr1.2:76182571-76182590 None:intergenic 35.0%
GCACCTGTACATAAAGATAA+TGG + chr1.2:76181824-76181843 None:intergenic 35.0%
GCTAACCATGATGTTATAGT+TGG - chr1.2:76181003-76181022 MS.gene34420:CDS 35.0%
GGAAATGGAAGAAAATTCTC+AGG - chr1.2:76182151-76182170 MS.gene34420:intron 35.0%
GTACTTTGTATCAGGGAATA+TGG + chr1.2:76180902-76180921 None:intergenic 35.0%
GTGAATCGTTGAAGCAAAAT+TGG + chr1.2:76183136-76183155 None:intergenic 35.0%
TCAAAGCTAAACATCCTGAA+TGG - chr1.2:76182782-76182801 MS.gene34420:intron 35.0%
TCAGTTTCAAAGTGACATCT+AGG - chr1.2:76183289-76183308 MS.gene34420:CDS 35.0%
TGATCCAAGATCTTTGTGTT+TGG - chr1.2:76182258-76182277 MS.gene34420:intron 35.0%
TGATGTTATAGTTGGAGTCT+TGG - chr1.2:76181011-76181030 MS.gene34420:CDS 35.0%
TTAACAACAGCGCCTTTAAA+TGG + chr1.2:76183213-76183232 None:intergenic 35.0%
! AAAAAGCTAGAATCTGAAGC+TGG - chr1.2:76180868-76180887 MS.gene34420:CDS 35.0%
! AATTAGTCCAAGAGTGCAAA+AGG - chr1.2:76182336-76182355 MS.gene34420:intron 35.0%
! ACAATACCCTTTGGTTTACA+TGG - chr1.2:76182216-76182235 MS.gene34420:intron 35.0%
! ATTAGTCCAAGAGTGCAAAA+GGG - chr1.2:76182337-76182356 MS.gene34420:intron 35.0%
! ATTGAATTGGTTCAAGACCA+AGG + chr1.2:76180954-76180973 None:intergenic 35.0%
! ATTGCAGATTTTATAGCAGC+TGG + chr1.2:76182811-76182830 None:intergenic 35.0%
! CAATACCCTTTGGTTTACAT+GGG - chr1.2:76182217-76182236 MS.gene34420:intron 35.0%
! CTTTTGATGAATACCACTCT+TGG + chr1.2:76180726-76180745 None:intergenic 35.0%
! GTAGTTGGTACTTTGTATCA+GGG + chr1.2:76180909-76180928 None:intergenic 35.0%
! GTTTTATCCATCTCTTTAGG+TGG - chr1.2:76181938-76181957 MS.gene34420:intron 35.0%
! TCATTTGGAGCAATGGAAAA+GGG - chr1.2:76182001-76182020 MS.gene34420:intron 35.0%
! TGTAGTTGGTACTTTGTATC+AGG + chr1.2:76180910-76180929 None:intergenic 35.0%
! TTCATTTGGAGCAATGGAAA+AGG - chr1.2:76182000-76182019 MS.gene34420:intron 35.0%
! TTGTTTTCTAACTGAGAGCA+CGG + chr1.2:76182200-76182219 None:intergenic 35.0%
!! CATAGTTTTACCACCATACA+AGG - chr1.2:76181568-76181587 MS.gene34420:CDS 35.0%
!! GTTTTTGTTTCATGTTCAGC+TGG - chr1.2:76182025-76182044 MS.gene34420:intron 35.0%
!! TCAGGAGCATCAATCTATAA+AGG - chr1.2:76182169-76182188 MS.gene34420:intron 35.0%
!! TTTGTGTTTGGAAGGTACTT+TGG - chr1.2:76182270-76182289 MS.gene34420:intron 35.0%
!!! TTTTTAGCTTCTGCCTTGTA+TGG + chr1.2:76181584-76181603 None:intergenic 35.0%
AAACCTGATATAGTAGCACC+TGG - chr1.2:76182625-76182644 MS.gene34420:intron 40.0%
AACATATCTTCCAGCTTGCA+TGG + chr1.2:76181507-76181526 None:intergenic 40.0%
AATGCTGCTACTATAGGAGA+TGG + chr1.2:76182565-76182584 None:intergenic 40.0%
ACATATCTTCCAGCTTGCAT+GGG + chr1.2:76181506-76181525 None:intergenic 40.0%
AGAAGATTAGCACCATGAAC+CGG + chr1.2:76181291-76181310 None:intergenic 40.0%
AGGACATGACATTGAAGTTC+CGG + chr1.2:76182737-76182756 None:intergenic 40.0%
AGGCAAAGTGAACCAGAATT+TGG - chr1.2:76183309-76183328 MS.gene34420:CDS 40.0%
ATGTCATGTCCTCATGTAAG+TGG - chr1.2:76182745-76182764 MS.gene34420:intron 40.0%
CAAAGTGAACCAGAATTTGG+AGG - chr1.2:76183312-76183331 MS.gene34420:CDS 40.0%
CCAAGATCTTTGTGTTTGGA+AGG - chr1.2:76182262-76182281 MS.gene34420:intron 40.0%
CCTTCCAAACACAAAGATCT+TGG + chr1.2:76182265-76182284 None:intergenic 40.0%
CTTACAAACACTGCAGCAAA+TGG - chr1.2:76182397-76182416 MS.gene34420:intron 40.0%
GAAACATTTGTGAGACTGAC+AGG + chr1.2:76182067-76182086 None:intergenic 40.0%
GGAAACACAACTGATATAGC+AGG + chr1.2:76183102-76183121 None:intergenic 40.0%
GGTGCAAGAATATTCTACCA+TGG - chr1.2:76181162-76181181 MS.gene34420:CDS 40.0%
GGTTCAAGACCAAGGAAATA+TGG + chr1.2:76180946-76180965 None:intergenic 40.0%
GTAGCAGTAGGAGAAAAAGA+AGG - chr1.2:76182457-76182476 MS.gene34420:intron 40.0%
GTCTCACAAATGTTTCACCA+TGG - chr1.2:76182071-76182090 MS.gene34420:intron 40.0%
TCAATACACCAACAGAAGCT+GGG - chr1.2:76180969-76180988 MS.gene34420:CDS 40.0%
TCAATGAAACTCTCACTCTC+AGG + chr1.2:76181051-76181070 None:intergenic 40.0%
TCATGTTCAGCTGGAAATTC+AGG - chr1.2:76182034-76182053 MS.gene34420:intron 40.0%
TGAACCAGAATTTGGAGGTT+TGG - chr1.2:76183317-76183336 MS.gene34420:CDS 40.0%
TGCTTCCCATGTAAACCAAA+GGG + chr1.2:76182225-76182244 None:intergenic 40.0%
TTATCCATCTCTTTAGGTGG+TGG - chr1.2:76181941-76181960 MS.gene34420:intron 40.0%
TTCAATACACCAACAGAAGC+TGG - chr1.2:76180968-76180987 MS.gene34420:CDS 40.0%
TTGCAGCTTACAAAGTGTGT+TGG - chr1.2:76181849-76181868 MS.gene34420:CDS 40.0%
TTGCTTCCCATGTAAACCAA+AGG + chr1.2:76182226-76182245 None:intergenic 40.0%
! GACTTCTTGTTGTGTGTAGT+TGG + chr1.2:76180924-76180943 None:intergenic 40.0%
! GTAGCAGCATTTTCATCAAG+AGG - chr1.2:76182574-76182593 MS.gene34420:intron 40.0%
! GTTCATGGTGCTAATCTTCT+TGG - chr1.2:76181291-76181310 MS.gene34420:CDS 40.0%
! TGTAGCTTCATTTGGAGCAA+TGG - chr1.2:76181994-76182013 MS.gene34420:intron 40.0%
!! AGGTTTGGTGTGGAAAGATA+GGG - chr1.2:76183332-76183351 MS.gene34420:CDS 40.0%
!! AGTTACAGCACTGCTTTTCA+TGG - chr1.2:76180814-76180833 MS.gene34420:CDS 40.0%
!!! GCAAAATTGGTTGGTTTTGC+TGG + chr1.2:76183123-76183142 None:intergenic 40.0%
AAGGTGCATGTGAAACTGGT+AGG - chr1.2:76181103-76181122 MS.gene34420:CDS 45.0%
ACACCTTATGATCATGGTGC+TGG - chr1.2:76182901-76182920 MS.gene34420:CDS 45.0%
AGGTGCATGTGAAACTGGTA+GGG - chr1.2:76181104-76181123 MS.gene34420:CDS 45.0%
ATAGTTGGAGTCTTGGACAC+TGG - chr1.2:76181018-76181037 MS.gene34420:CDS 45.0%
CACACCAAACCTCCAAATTC+TGG + chr1.2:76183324-76183343 None:intergenic 45.0%
CAGGTAGTGAAAAATGCAGG+AGG - chr1.2:76182361-76182380 MS.gene34420:intron 45.0%
CATGGATATGAAGCAGCAAC+AGG - chr1.2:76181180-76181199 MS.gene34420:CDS 45.0%
CCAAGAGATCAAGATGGTCA+TGG - chr1.2:76181234-76181253 MS.gene34420:CDS 45.0%
CCATGACCATCTTGATCTCT+TGG + chr1.2:76181237-76181256 None:intergenic 45.0%
CCTAGAAAAGCTCTTGATCC+AGG - chr1.2:76182934-76182953 MS.gene34420:CDS 45.0%
CTATGGAACAGCAAGAGGAA+TGG - chr1.2:76181320-76181339 MS.gene34420:CDS 45.0%
CTCTAATTTCCCATGCAAGC+TGG - chr1.2:76181494-76181513 MS.gene34420:CDS 45.0%
GAGTCTTGGACACTGGTATT+TGG - chr1.2:76181025-76181044 MS.gene34420:CDS 45.0%
GCTTACAAAGTGTGTTGGAC+TGG - chr1.2:76181854-76181873 MS.gene34420:CDS 45.0%
GGACAGGTAGTGAAAAATGC+AGG - chr1.2:76182358-76182377 MS.gene34420:intron 45.0%
GTGTGAACATTCTTGCTGCT+TGG - chr1.2:76182647-76182666 MS.gene34420:intron 45.0%
GTTGATACAGCTGTAGCTGA+TGG - chr1.2:76181908-76181927 MS.gene34420:CDS 45.0%
TATGCCTATGGAACAGCAAG+AGG - chr1.2:76181315-76181334 MS.gene34420:CDS 45.0%
TCCTCATGTAAGTGGAATCG+CGG - chr1.2:76182753-76182772 MS.gene34420:intron 45.0%
TGAAACCAGTACCTTCTCAC+TGG - chr1.2:76181079-76181098 MS.gene34420:CDS 45.0%
TGGTGACTGGAAAAGATGTC+TGG + chr1.2:76180706-76180725 None:intergenic 45.0%
TGTTTCACCATGGATCACCA+CGG - chr1.2:76182081-76182100 MS.gene34420:intron 45.0%
TTAGCTTCTGCCTTGTATGG+TGG + chr1.2:76181581-76181600 None:intergenic 45.0%
TTTCCAAGGCTAACATCTGC+AGG + chr1.2:76182136-76182155 None:intergenic 45.0%
TTTGGATCGTCGAACTGTCA+CGG - chr1.2:76182288-76182307 MS.gene34420:intron 45.0%
! AACATTCTTGCTGCTTGGAG+TGG - chr1.2:76182652-76182671 MS.gene34420:intron 45.0%
! CCTGGATCAAGAGCTTTTCT+AGG + chr1.2:76182937-76182956 None:intergenic 45.0%
! CTGTTGCTGCTTCATATCCA+TGG + chr1.2:76181182-76181201 None:intergenic 45.0%
! GACCAACATTGGTAACAGTG+CGG + chr1.2:76183158-76183177 None:intergenic 45.0%
! GTGAAAAATGCAGGAGGTGT+AGG - chr1.2:76182367-76182386 MS.gene34420:intron 45.0%
! TACAAAGTGTGTTGGACTGG+TGG - chr1.2:76181857-76181876 MS.gene34420:CDS 45.0%
! TCTTTTCCAGTCACCAAGAG+TGG - chr1.2:76180710-76180729 MS.gene34420:CDS 45.0%
! TGAATACCACTCTTGGTGAC+TGG + chr1.2:76180719-76180738 None:intergenic 45.0%
! TGGAAAGGTGCATGTGAAAC+TGG - chr1.2:76181099-76181118 MS.gene34420:CDS 45.0%
! TTTCCTGCAGATGTTAGCCT+TGG - chr1.2:76182130-76182149 MS.gene34420:intron 45.0%
! TTTTCTCCTACTGCTACTGC+TGG + chr1.2:76182454-76182473 None:intergenic 45.0%
! TTTTTCTGCCCAGCTTCTGT+TGG + chr1.2:76180980-76180999 None:intergenic 45.0%
!! ACACCAGGTGCTACTATATC+AGG + chr1.2:76182631-76182650 None:intergenic 45.0%
!! CAGAATTTGGAGGTTTGGTG+TGG - chr1.2:76183322-76183341 MS.gene34420:CDS 45.0%
!! CAGCACTGCTTTTCATGGAA+TGG - chr1.2:76180819-76180838 MS.gene34420:CDS 45.0%
!! CATTCCTCTTGCTGTTCCAT+AGG + chr1.2:76181322-76181341 None:intergenic 45.0%
!! GAGGTTTGGTGTGGAAAGAT+AGG - chr1.2:76183331-76183350 MS.gene34420:CDS 45.0%
!! GCAGAAGAAGCATCTCTAAG+AGG + chr1.2:76182871-76182890 None:intergenic 45.0%
!! GCAGATGTTAGCCTTGGAAA+TGG - chr1.2:76182136-76182155 MS.gene34420:intron 45.0%
ATAGCAGCTGGACTCCATTC+AGG + chr1.2:76182799-76182818 None:intergenic 50.0%
CACCGCACTGTTACCAATGT+TGG - chr1.2:76183153-76183172 MS.gene34420:CDS 50.0%
CATGCACCTTTCCAGTGAGA+AGG + chr1.2:76181093-76181112 None:intergenic 50.0%
CCAGTACCTTCTCACTGGAA+AGG - chr1.2:76181084-76181103 MS.gene34420:CDS 50.0%
CTACTGCTACTGCTGGAAGT+AGG + chr1.2:76182447-76182466 None:intergenic 50.0%
CTACTTCCAGCAGTAGCAGT+AGG - chr1.2:76182445-76182464 MS.gene34420:intron 50.0%
GACTCCACCACCTAAAGAGA+TGG + chr1.2:76181948-76181967 None:intergenic 50.0%
GCAGCAAGAATGTTCACACC+AGG + chr1.2:76182646-76182665 None:intergenic 50.0%
GGAAACAGCAGGACCAACAT+TGG + chr1.2:76183169-76183188 None:intergenic 50.0%
GGTGCATGTGAAACTGGTAG+GGG - chr1.2:76181105-76181124 MS.gene34420:CDS 50.0%
GTGAAACTGGTAGGGGATTC+AGG - chr1.2:76181112-76181131 MS.gene34420:CDS 50.0%
TGGCCAGCACCATGATCATA+AGG + chr1.2:76182907-76182926 None:intergenic 50.0%
TTGGATCGTCGAACTGTCAC+GGG - chr1.2:76182289-76182308 MS.gene34420:intron 50.0%
TTTGTGAGACTGACAGGGTC+AGG + chr1.2:76182061-76182080 None:intergenic 50.0%
! ACCTGTCCCTTTTGCACTCT+TGG + chr1.2:76182346-76182365 None:intergenic 50.0%
! CCTTTCCAGTGAGAAGGTAC+TGG + chr1.2:76181087-76181106 None:intergenic 50.0%
! TCCAAGAGTGCAAAAGGGAC+AGG - chr1.2:76182342-76182361 MS.gene34420:intron 50.0%
ACAGCAAGAGGAATGGCACC+AGG - chr1.2:76181327-76181346 MS.gene34420:CDS 55.0%
AGCACCATGAACCGGAGATC+CGG + chr1.2:76181283-76181302 None:intergenic 55.0%
AGCTACTGTTGCCGGATCTC+CGG - chr1.2:76181269-76181288 MS.gene34420:CDS 55.0%
CACACTGCAGCTACTGTTGC+CGG - chr1.2:76181261-76181280 MS.gene34420:CDS 55.0%
CACGGTTGGAGCTAGCACAA+TGG - chr1.2:76182099-76182118 MS.gene34420:intron 55.0%
CATTGTGCTAGCTCCAACCG+TGG + chr1.2:76182101-76182120 None:intergenic 55.0%
GCCGCGATTCCACTTACATG+AGG + chr1.2:76182757-76182776 None:intergenic 55.0%
TCACCATGGATCACCACGGT+TGG - chr1.2:76182085-76182104 MS.gene34420:intron 55.0%
! GCTGCTTGGAGTGGACTTAC+TGG - chr1.2:76182661-76182680 MS.gene34420:intron 55.0%
GCTCCAACCGTGGTGATCCA+TGG + chr1.2:76182091-76182110 None:intergenic 60.0%
GTTGCCGGATCTCCGGTTCA+TGG - chr1.2:76181276-76181295 MS.gene34420:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 76180685 76183404 76180685 ID=MS.gene34420
chr1.2 mRNA 76180685 76183404 76180685 ID=MS.gene34420.t1;Parent=MS.gene34420
chr1.2 exon 76182888 76183404 76182888 ID=MS.gene34420.t1.exon1;Parent=MS.gene34420.t1
chr1.2 CDS 76182888 76183404 76182888 ID=cds.MS.gene34420.t1;Parent=MS.gene34420.t1
chr1.2 exon 76180685 76181949 76180685 ID=MS.gene34420.t1.exon2;Parent=MS.gene34420.t1
chr1.2 CDS 76180685 76181949 76180685 ID=cds.MS.gene34420.t1;Parent=MS.gene34420.t1
Gene Sequence

>MS.gene34420

ATGGATCAATCAGCAAAACCAGACATCTTTTCCAGTCACCAAGAGTGGTATTCATCAAAAGTGAAATCAGTACTTTCTAAATCAGTAGAAGCTGAAATGGACAACAATGAAGAAGAGAGAATCATTTACAGTTACAGCACTGCTTTTCATGGAATGGCTGCTAAATTAAGCACAGAAGAAGCAAAAAAGCTAGAATCTGAAGCTGGTGTTGTAGCCATATTCCCTGATACAAAGTACCAACTACACACAACAAGAAGTCCATATTTCCTTGGTCTTGAACCAATTCAATACACCAACAGAAGCTGGGCAGAAAAACTAGCTAACCATGATGTTATAGTTGGAGTCTTGGACACTGGTATTTGGCCTGAGAGTGAGAGTTTCATTGATACAGGACTGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAGGGGATTCAGGAAACATCACTGCAATAAGAAGATTGTAGGTGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGTAAGATTGATGAGCAAGAAGATTACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCGGTTCATGGTGCTAATCTTCTTGGTTATGCCTATGGAACAGCAAGAGGAATGGCACCAGGTATTACTAAAATATTTTGTTTATTGATGACTAATACAAGAGATTCTCTTTATACATATCAGTTCATATGAAAATGAAGAAGGTGACAAGATTAATAACTAACTAACAAACTCTTAAGTCTTAACTAACTATTAGCTAAATTTATCTCTAATTTCCCATGCAAGCTGGAAGATATGTTTAGTACAATTCCAGATTGGAAAATTTAAAAAAGAATATGAACATAGTTTTACCACCATACAAGGCAGAAGCTAAAAAAATGCTTAACCATCTTTTATTTTTATGGACGGAAGATAAAATATCAGTGAGACTAGAAAGAATGAAAAAAGCTTAACCATGCATTATCTTTATGGACAGAAATTAAAATGTCAATGAGCCTAGAAAGAATGAAAAATGTTTAACCATCTAATACTATCTTCATGTTCAAAATCTAAAATGTCAATGAAGCTTGAGATAATGAAAATTGTTTAACCATCCATTATCTTTATGTACAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTCAATGTTTTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACTCCCATGATAGTTTATCTGTAGCTTCATTTGGAGCAATGGAAAAGGGTGTTTTTGTTTCATGTTCAGCTGGAAATTCAGGACCTGACCCTGTCAGTCTCACAAATGTTTCACCATGGATCACCACGGTTGGAGCTAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAATTCTCAGGAGCATCAATCTATAAAGGAAAATCCGTGCTCTCAGTTAGAAAACAATACCCTTTGGTTTACATGGGAAGCAACTCAAGCAGTCCTGATCCAAGATCTTTGTGTTTGGAAGGTACTTTGGATCGTCGAACTGTCACGGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCAAGAGTGCAAAAGGGACAGGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTTACAAACACTGCAGCAAATGGAGAAGAATTAGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAGTAGGAGAAAAAGAAGGCAAAGATATCAAACAATATGTGTTAACAACTAAAAAAGCTACAGCTACATTAGCTTTTCATAACACAAGATTAGGAATTAGACCATCTCCTATAGTAGCAGCATTTTCATCAAGAGGCCCAAGTTTACTCACACTTGAAATTCTAAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTTACTGGTCCATCAAGTTTACCAATAGATCATAGAAGGGTTAAGTTTAACATACTTTCCGGAACTTCAATGTCATGTCCTCATGTAAGTGGAATCGCGGCTATGATCAAAGCTAAACATCCTGAATGGAGTCCAGCTGCTATAAAATCTGCAATCATGACAACAGCTTATGTTCATGATAATACTATCAAACCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACACCTTATGATCATGGTGCTGGCCATATTAATCCTAGAAAAGCTCTTGATCCAGGTTTAGTATATGATATCGAACCTCAGGATTACTTTGAGTTTCTTTGCTCAAAGAAACTGAGCCCTTCAGAATTAGTAGTTTTTTCTAAAAATTCAAACAGAAATTGCAAACACACTCTTGCTAGTGCTAGTGACTTGAACTATCCTGCTATATCAGTTGTGTTTCCAGCAAAACCAACCAATTTTGCTTCAACGATTCACCGCACTGTTACCAATGTTGGTCCTGCTGTTTCCAAATATCATGTCATTGTTACACCATTTAAAGGCGCTGTTGTTAAAGTTGAGCCAGATACATTGAATTTTACAAGAAAATATCAGAAACTATCTTACAAGATCAGTTTCAAAGTGACATCTAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATAGGGTGCATAAAGTAAGAAGTCCGATTGTGATAACTTATATGCCACCAATGTGA
Protein sequence

>MS.gene34420.t1

MDQSAKPDIFSSHQEWYSSKVKSVLSKSVEAEMDNNEEERIIYSYSTAFHGMAAKLSTEEAKKLESEAGVVAIFPDTKYQLHTTRSPYFLGLEPIQYTNRSWAEKLANHDVIVGVLDTGIWPESESFIDTGLKPVPSHWKGACETGRGFRKHHCNKKIVGARIFYHGYEAATDVSLGNGRKFSGASIYKGKSVLSVRKQYPLVYMGSNSSSPDPRSLCLEGTLDRRTVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAVGEKEGKDIKQYVLTTKKATATLAFHNTRLGIRPSPIVAAFSSRGPSLLTLEILKPDIVAPGVNILAAWSGLTGPSSLPIDHRRVKFNILSGTSMSCPHVSGIAAMIKAKHPEWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLVYDIEPQDYFEFLCSKKLSPSELVVFSKNSNRNCKHTLASASDLNYPAISVVFPAKPTNFASTIHRTVTNVGPAVSKYHVIVTPFKGAVVKVEPDTLNFTRKYQKLSYKISFKVTSRQSEPEFGGLVWKDRVHKVRSPIVITYMPPM