AlfalfaGEDB | MS.gene060884

M. sativa cultivar XinJiangDaYe / MS.gene060884

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00514.26

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060884.t1	RHN76992.1	98.3	301	4	1	1	301	261	560	1.20E-133	486.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060884.t1	Q9C7G1	32.2	183	116	3	18	198	527	703	8.2e-19	95.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060884.t1	G7I8B4	98.3	301	4	1	1	301	216	515	8.4e-134	486.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene05157	MS.gene060884	0.801446	8.97E-49	-1.69E-46
MS.gene051719	MS.gene060884	0.819431	1.17E-52	-1.69E-46
MS.gene051720	MS.gene060884	0.816994	4.15E-52	-1.69E-46
MS.gene052732	MS.gene060884	0.823818	1.13E-53	-1.69E-46
MS.gene053144	MS.gene060884	0.884793	1.42E-71	-1.69E-46
MS.gene053581	MS.gene060884	0.836786	7.63E-57	-1.69E-46
MS.gene054584	MS.gene060884	0.864964	8.32E-65	-1.69E-46
MS.gene055465	MS.gene060884	0.802751	4.84E-49	-1.69E-46
MS.gene055466	MS.gene060884	0.804567	2.03E-49	-1.69E-46
MS.gene055537	MS.gene060884	0.810124	1.35E-50	-1.69E-46
MS.gene055580	MS.gene060884	-0.805248	1.46E-49	-1.69E-46
MS.gene059297	MS.gene060884	0.802349	5.85E-49	-1.69E-46
MS.gene060587	MS.gene060884	0.808744	2.66E-50	-1.69E-46
MS.gene060884	MS.gene060886	0.989303	1.52E-177	-1.69E-46
MS.gene060884	MS.gene060888	0.895522	8.85E-76	-1.69E-46
MS.gene060884	MS.gene061840	0.853407	2.44E-61	-1.69E-46
MS.gene060884	MS.gene062043	0.812602	3.90E-51	-1.69E-46
MS.gene060884	MS.gene06258	0.800202	1.61E-48	-1.69E-46
MS.gene060884	MS.gene062821	0.837441	5.19E-57	-1.69E-46
MS.gene060884	MS.gene063452	0.847942	8.40E-60	-1.69E-46
MS.gene060884	MS.gene065667	0.826027	3.40E-54	-1.69E-46
MS.gene060884	MS.gene067071	0.831255	1.85E-55	-1.69E-46
MS.gene060884	MS.gene068022	0.833158	6.26E-56	-1.69E-46
MS.gene060884	MS.gene068925	0.836449	9.30E-57	-1.69E-46
MS.gene060884	MS.gene070598	0.803194	3.92E-49	-1.69E-46
MS.gene060884	MS.gene071096	0.80216	6.40E-49	-1.69E-46
MS.gene060884	MS.gene071315	0.828193	1.03E-54	-1.69E-46
MS.gene060884	MS.gene071316	0.82597	3.51E-54	-1.69E-46
MS.gene060884	MS.gene072115	0.823877	1.09E-53	-1.69E-46
MS.gene060884	MS.gene07359	0.845858	3.12E-59	-1.69E-46
MS.gene060884	MS.gene074337	0.81691	4.33E-52	-1.69E-46
MS.gene060884	MS.gene074519	0.813249	2.82E-51	-1.69E-46
MS.gene060884	MS.gene08581	0.818126	2.31E-52	-1.69E-46
MS.gene060884	MS.gene09087	0.824218	9.09E-54	-1.69E-46
MS.gene060884	MS.gene09947	0.810054	1.39E-50	-1.69E-46
MS.gene060884	MS.gene20903	0.852984	3.22E-61	-1.69E-46
MS.gene060884	MS.gene21144	0.82485	6.45E-54	-1.69E-46
MS.gene060884	MS.gene25810	0.842656	2.26E-58	-1.69E-46
MS.gene060884	MS.gene26380	0.800634	1.31E-48	-1.69E-46
MS.gene060884	MS.gene26659	0.820309	7.34E-53	-1.69E-46
MS.gene060884	MS.gene26851	0.801233	9.92E-49	-1.69E-46
MS.gene060884	MS.gene27918	0.807902	4.03E-50	-1.69E-46
MS.gene060884	MS.gene28387	0.813335	2.70E-51	-1.69E-46
MS.gene060884	MS.gene29755	0.813926	2.00E-51	-1.69E-46
MS.gene060884	MS.gene29957	0.817227	3.68E-52	-1.69E-46
MS.gene060884	MS.gene30882	0.832788	7.74E-56	-1.69E-46
MS.gene060884	MS.gene31203	0.830268	3.23E-55	-1.69E-46
MS.gene060884	MS.gene31204	0.83202	1.20E-55	-1.69E-46
MS.gene060884	MS.gene31433	0.81115	8.08E-51	-1.69E-46
MS.gene060884	MS.gene33141	0.875987	2.00E-68	-1.69E-46
MS.gene060884	MS.gene34286	0.877546	5.76E-69	-1.69E-46
MS.gene060884	MS.gene34418	0.806739	7.11E-50	-1.69E-46
MS.gene060884	MS.gene34420	0.817049	4.03E-52	-1.69E-46
MS.gene060884	MS.gene35718	0.8244	8.24E-54	-1.69E-46
MS.gene060884	MS.gene36284	0.831447	1.66E-55	-1.69E-46
MS.gene060884	MS.gene37670	0.8223	2.55E-53	-1.69E-46
MS.gene060884	MS.gene38303	0.871013	9.44E-67	-1.69E-46
MS.gene060884	MS.gene38561	0.833309	5.74E-56	-1.69E-46
MS.gene060884	MS.gene38693	0.809974	1.45E-50	-1.69E-46
MS.gene060884	MS.gene41651	0.804917	1.72E-49	-1.69E-46
MS.gene060884	MS.gene41679	0.807546	4.79E-50	-1.69E-46
MS.gene060884	MS.gene43740	0.832664	8.31E-56	-1.69E-46
MS.gene060884	MS.gene44783	0.805707	1.17E-49	-1.69E-46
MS.gene060884	MS.gene44844	0.83633	9.97E-57	-1.69E-46
MS.gene060884	MS.gene47875	0.816858	4.45E-52	-1.69E-46
MS.gene060884	MS.gene48814	0.819326	1.23E-52	-1.69E-46
MS.gene060884	MS.gene49359	0.810676	1.02E-50	-1.69E-46
MS.gene060884	MS.gene50564	0.817695	2.89E-52	-1.69E-46
MS.gene060884	MS.gene52057	0.82008	8.29E-53	-1.69E-46
MS.gene060884	MS.gene53249	0.810324	1.22E-50	-1.69E-46
MS.gene060884	MS.gene53280	0.80424	2.38E-49	-1.69E-46
MS.gene060884	MS.gene58214	0.809803	1.58E-50	-1.69E-46
MS.gene060884	MS.gene59294	0.801294	9.64E-49	-1.69E-46
MS.gene060884	MS.gene61627	0.823506	1.34E-53	-1.69E-46
MS.gene060884	MS.gene62682	0.810589	1.07E-50	-1.69E-46
MS.gene060884	MS.gene62806	0.813531	2.44E-51	-1.69E-46
MS.gene060884	MS.gene62916	0.81841	1.99E-52	-1.69E-46
MS.gene060884	MS.gene65276	0.850699	1.43E-60	-1.69E-46
MS.gene060884	MS.gene65430	0.800746	1.25E-48	-1.69E-46
MS.gene060884	MS.gene70730	0.837934	3.88E-57	-1.69E-46
MS.gene060884	MS.gene71704	0.821999	3.00E-53	-1.69E-46
MS.gene060884	MS.gene72135	0.811912	5.52E-51	-1.69E-46
MS.gene060884	MS.gene72272	0.804858	1.77E-49	-1.69E-46
MS.gene060884	MS.gene72707	0.830802	2.39E-55	-1.69E-46
MS.gene060884	MS.gene72986	0.800121	1.67E-48	-1.69E-46
MS.gene060884	MS.gene75538	0.801961	7.03E-49	-1.69E-46
MS.gene060884	MS.gene75663	0.803455	3.46E-49	-1.69E-46
MS.gene060884	MS.gene76032	0.808718	2.70E-50	-1.69E-46
MS.gene060884	MS.gene76734	0.806317	8.72E-50	-1.69E-46
MS.gene060884	MS.gene78729	0.806755	7.05E-50	-1.69E-46
MS.gene060884	MS.gene79900	0.809654	1.70E-50	-1.69E-46
MS.gene060884	MS.gene81678	0.814618	1.41E-51	-1.69E-46
MS.gene060884	MS.gene84426	0.821072	4.90E-53	-1.69E-46
MS.gene060884	MS.gene88718	0.812019	5.23E-51	-1.69E-46
MS.gene060884	MS.gene89099	0.837149	6.16E-57	-1.69E-46
MS.gene060884	MS.gene89974	0.833115	6.42E-56	-1.69E-46
MS.gene060884	MS.gene90610	0.812436	4.24E-51	-1.69E-46
MS.gene060884	MS.gene95401	0.809208	2.12E-50	-1.69E-46
MS.gene060884	MS.gene97156	0.810977	8.81E-51	-1.69E-46
MS.gene060884	MS.gene97306	0.803607	3.22E-49	-1.69E-46
MS.gene060884	MS.gene97761	0.831762	1.39E-55	-1.69E-46
MS.gene060884	MS.gene97762	0.826164	3.15E-54	-1.69E-46
MS.gene060884	MS.gene98395	0.811497	6.80E-51	-1.69E-46
MS.gene060884	MS.gene99595	0.801815	7.53E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060884.t1	MTR_1g014420	98.007	301	5	1	1	301	216	515	0.0	597
MS.gene060884.t1	MTR_3g106140	74.503	302	73	2	1	301	197	495	3.76e-142	410
MS.gene060884.t1	MTR_2g015870	35.433	254	132	7	52	301	215	440	2.37e-30	119
MS.gene060884.t1	MTR_8g080280	31.868	182	114	3	21	198	534	709	2.77e-22	97.4
MS.gene060884.t1	MTR_5g079550	28.253	269	156	7	15	275	116	355	8.71e-20	89.0
MS.gene060884.t1	MTR_3g085610	28.230	209	140	4	1	206	514	715	4.33e-17	82.0
MS.gene060884.t1	MTR_3g067685	27.413	259	153	8	32	285	154	382	1.93e-16	79.3
MS.gene060884.t1	MTR_4g063800	32.990	194	113	7	17	204	452	634	2.41e-16	79.7
MS.gene060884.t1	MTR_4g485520	30.978	184	117	4	17	198	472	647	2.65e-14	73.6
MS.gene060884.t1	MTR_4g485520	30.978	184	117	4	17	198	304	479	3.89e-14	72.8
MS.gene060884.t1	MTR_7g059405	29.570	186	123	3	14	199	457	634	2.46e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060884.t1	AT4G31890	66.113	301	87	5	1	301	233	518	2.77e-124	365
MS.gene060884.t1	AT4G31890	66.113	301	87	5	1	301	233	518	2.77e-124	365
MS.gene060884.t1	AT4G31890	66.113	301	87	5	1	301	233	518	2.77e-124	365
MS.gene060884.t1	AT2G25130	62.925	294	80	7	1	291	200	467	5.25e-114	337
MS.gene060884.t1	AT2G27430	32.707	266	154	5	36	301	198	438	6.47e-33	126
MS.gene060884.t1	AT1G67530	31.707	205	126	4	3	204	519	712	6.29e-21	93.6
MS.gene060884.t1	AT1G67530	31.707	205	126	4	3	204	519	712	6.29e-21	93.6
MS.gene060884.t1	AT1G67530	31.707	205	126	4	3	204	519	712	6.29e-21	93.6
MS.gene060884.t1	AT1G24330	31.707	205	131	4	20	221	531	729	1.68e-20	92.0
MS.gene060884.t1	AT1G24330	31.707	205	131	4	20	221	531	729	1.68e-20	92.0
MS.gene060884.t1	AT1G27910	33.333	183	114	4	18	198	527	703	1.76e-18	86.3
MS.gene060884.t1	AT2G28830	34.848	198	111	8	17	207	386	572	2.30e-16	79.7
MS.gene060884.t1	AT3G03440	26.894	264	156	7	21	276	169	403	1.43e-13	70.9
MS.gene060884.t1	AT3G46510	32.258	186	110	6	17	197	453	627	1.58e-13	71.2
MS.gene060884.t1	AT1G71020	31.892	185	115	4	17	198	295	471	2.15e-13	70.5
MS.gene060884.t1	AT1G71020	31.892	185	115	4	17	198	443	619	2.29e-13	70.9
MS.gene060884.t1	AT2G23140	31.016	187	120	4	13	198	449	627	8.96e-12	65.9
MS.gene060884.t1	AT2G23140	31.016	187	120	4	13	198	449	627	8.96e-12	65.9
MS.gene060884.t1	AT2G23140	31.016	187	120	4	13	198	638	816	1.39e-11	65.5
MS.gene060884.t1	AT2G23140	31.016	187	120	4	13	198	638	816	1.39e-11	65.5
MS.gene060884.t1	AT2G23140	31.016	187	120	4	13	198	641	819	1.41e-11	65.5

Find 65 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTCGAATAAACCGATAAT+TGG	0.146060	1.2:+8269735	MS.gene060884:CDS
AGCCAATGTTCAGTTTATTT+TGG	0.151005	1.2:+8269878	MS.gene060884:CDS
CTTCTTGAGTTGTCGCTTAT+TGG	0.172434	1.2:+8270170	MS.gene060884:CDS
CTGAAGAGTTCTAACTAAAA+AGG	0.175660	1.2:-8269775	None:intergenic
CCTTTCAATCCTTAGCAATT+TGG	0.178700	1.2:+8269962	MS.gene060884:CDS
GACGATGAAGTTCCGCAAAT+TGG	0.211163	1.2:-8270305	None:intergenic
CCCGGATGTGTTTCCTATCT+TGG	0.249308	1.2:+8270022	MS.gene060884:CDS
GGGAACTACAACGGAAATTT+AGG	0.256409	1.2:+8270266	MS.gene060884:CDS
GATAAAGGGAAACAGGTTTC+AGG	0.257229	1.2:+8270245	MS.gene060884:CDS
GAGAATAGATAAAGGGAAAC+AGG	0.320824	1.2:+8270238	MS.gene060884:CDS
GAAACGGGCGTCGAGGCTAT+TGG	0.335825	1.2:+8270208	MS.gene060884:CDS
GAAAGTTTGAGAATAGATAA+AGG	0.351248	1.2:+8270230	MS.gene060884:CDS
ACGATGAAGTTCCGCAAATT+GGG	0.353654	1.2:-8270304	None:intergenic
GCAGCTGAAGACCCAATTAT+CGG	0.368315	1.2:-8269747	None:intergenic
TCTTGGTCGATGTATTGAAT+TGG	0.380089	1.2:+8270039	MS.gene060884:CDS
GTTATGTCGCATAAATCTTA+TGG	0.386596	1.2:+8270107	MS.gene060884:CDS
AAAATAAACTGAACATTGGC+TGG	0.400264	1.2:-8269876	None:intergenic
TTCAATACATCGACCAAGAT+AGG	0.418350	1.2:-8270035	None:intergenic
ATCTTCAGATGGTATTGATT+CGG	0.420177	1.2:+8269665	MS.gene060884:CDS
AAAGTTTGAGAATAGATAAA+GGG	0.425462	1.2:+8270231	MS.gene060884:CDS
AGGAGGAGGAAAAGAGTGTT+CGG	0.438802	1.2:+8270352	MS.gene060884:CDS
TACTACTTTGACTCAGAAAC+GGG	0.441375	1.2:+8270193	MS.gene060884:CDS
ATTCGAATAAACCGATAATT+GGG	0.445804	1.2:+8269736	MS.gene060884:CDS
CCAAATTGCTAAGGATTGAA+AGG	0.463067	1.2:-8269962	None:intergenic
AAGCAGGCCATGATCGAGGC+AGG	0.466247	1.2:+8270134	MS.gene060884:CDS
CCAGATGGAGGAGGAGGAGG+AGG	0.469128	1.2:+8270338	MS.gene060884:CDS
TTCACCTGAATGCCAGGAAA+AGG	0.471606	1.2:+8270067	MS.gene060884:CDS
CACAATCCCTGCCTCGATCA+TGG	0.473174	1.2:-8270141	None:intergenic
AAACCAGATGGAGGAGGAGG+AGG	0.478442	1.2:+8270335	MS.gene060884:CDS
GTACTACTTTGACTCAGAAA+CGG	0.478774	1.2:+8270192	MS.gene060884:CDS
CCAATTGAGTTTATCAGAAA+CGG	0.486775	1.2:-8269915	None:intergenic
ACCAAGATAGGAAACACATC+CGG	0.487266	1.2:-8270023	None:intergenic
ACTGTCTCTGCCCCAATTTG+CGG	0.487673	1.2:+8270293	MS.gene060884:CDS
GAATGATTCACCTGAATGCC+AGG	0.488606	1.2:+8270061	MS.gene060884:CDS
CCGTTTCTGATAAACTCAAT+TGG	0.492077	1.2:+8269915	MS.gene060884:CDS
ATAAAGGGAAACAGGTTTCA+GGG	0.497964	1.2:+8270246	MS.gene060884:CDS
AAAGGCAATAAGTGCTGTCC+CGG	0.518431	1.2:+8270004	MS.gene060884:CDS
GACTATATCTTGAGGCAAGT+TGG	0.519499	1.2:-8270471	None:intergenic
AAGCTTATTGAATCTTCAGA+TGG	0.525195	1.2:+8269654	MS.gene060884:CDS
ATCAACTAGAGCAGGTAGAA+AGG	0.527044	1.2:+8269986	MS.gene060884:CDS
ACATCGAAAATTCTTCAGAA+TGG	0.527971	1.2:-8270545	None:intergenic
TTCCAAAATAAACTGAACAT+TGG	0.543173	1.2:-8269880	None:intergenic
GATAAACTCAATTGGCGACA+TGG	0.543215	1.2:+8269923	MS.gene060884:CDS
CCAAGATAGGAAACACATCC+GGG	0.543957	1.2:-8270022	None:intergenic
TAAATCTTATGGTGACAAGC+AGG	0.546845	1.2:+8270118	MS.gene060884:CDS
AATTTGGTATCAACTAGAGC+AGG	0.548849	1.2:+8269978	MS.gene060884:CDS
AGTGACTTAAAATGATCTGA+TGG	0.562549	1.2:-8270494	None:intergenic
GCAAAACCAGATGGAGGAGG+AGG	0.565741	1.2:+8270332	MS.gene060884:CDS
TCGTCGTGTGCAAAACCAGA+TGG	0.569844	1.2:+8270323	MS.gene060884:CDS
CATGAGGAAAATTGTGAAGA+GGG	0.571586	1.2:+8270448	MS.gene060884:CDS
AAATAAACTGAACATTGGCT+GGG	0.578121	1.2:-8269875	None:intergenic
ATAAACTCAATTGGCGACAT+GGG	0.579986	1.2:+8269924	MS.gene060884:CDS
TGAGTTTGCAAAACAACATG+AGG	0.582736	1.2:+8270432	MS.gene060884:CDS
TAGTTGATACCAAATTGCTA+AGG	0.585434	1.2:-8269971	None:intergenic
TTCAGATGGTATTGATTCGG+CGG	0.602952	1.2:+8269668	MS.gene060884:CDS
CGATGAAGTTCCGCAAATTG+GGG	0.609312	1.2:-8270303	None:intergenic
ACATGAGGAAAATTGTGAAG+AGG	0.616000	1.2:+8270447	MS.gene060884:CDS
GTGACTTAAAATGATCTGAT+GGG	0.620285	1.2:-8270493	None:intergenic
TGTGCAAAACCAGATGGAGG+AGG	0.627739	1.2:+8270329	MS.gene060884:CDS
TGACTCAGAAACGGGCGTCG+AGG	0.654081	1.2:+8270201	MS.gene060884:CDS
AGCAGGCCATGATCGAGGCA+GGG	0.660279	1.2:+8270135	MS.gene060884:CDS
TGACAAGCAGGCCATGATCG+AGG	0.670822	1.2:+8270130	MS.gene060884:CDS
TCTGATGGGACTATATCTTG+AGG	0.670824	1.2:-8270479	None:intergenic
TCGTGTGCAAAACCAGATGG+AGG	0.672294	1.2:+8270326	MS.gene060884:CDS
CAGGTTTCAGGGAACTACAA+CGG	0.687032	1.2:+8270257	MS.gene060884:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGTTTGAGAATAGATAAA+GGG	+	chr1.2:8270231-8270250	MS.gene060884:CDS	20.0%
!	ATTCGAATAAACCGATAATT+GGG	+	chr1.2:8269736-8269755	MS.gene060884:CDS	25.0%
!	GAAAGTTTGAGAATAGATAA+AGG	+	chr1.2:8270230-8270249	MS.gene060884:CDS	25.0%
!	TTCCAAAATAAACTGAACAT+TGG	-	chr1.2:8269883-8269902	None:intergenic	25.0%
!!	TGAAGAGTTCTAACTAAAAA+GGG	-	chr1.2:8269777-8269796	None:intergenic	25.0%
!!!	GTTTATTTTGGAAACTGATT+TGG	+	chr1.2:8269890-8269909	MS.gene060884:CDS	25.0%
	AAAATAAACTGAACATTGGC+TGG	-	chr1.2:8269879-8269898	None:intergenic	30.0%
	AAGCTTATTGAATCTTCAGA+TGG	+	chr1.2:8269654-8269673	MS.gene060884:CDS	30.0%
	AGTGACTTAAAATGATCTGA+TGG	-	chr1.2:8270497-8270516	None:intergenic	30.0%
	CCAATTGAGTTTATCAGAAA+CGG	-	chr1.2:8269918-8269937	None:intergenic	30.0%
	GATTCGAATAAACCGATAAT+TGG	+	chr1.2:8269735-8269754	MS.gene060884:CDS	30.0%
	GTGACTTAAAATGATCTGAT+GGG	-	chr1.2:8270496-8270515	None:intergenic	30.0%
	GTTATGTCGCATAAATCTTA+TGG	+	chr1.2:8270107-8270126	MS.gene060884:CDS	30.0%
!	AAATAAACTGAACATTGGCT+GGG	-	chr1.2:8269878-8269897	None:intergenic	30.0%
!	AGCCAATGTTCAGTTTATTT+TGG	+	chr1.2:8269878-8269897	MS.gene060884:CDS	30.0%
!	CTGAAGAGTTCTAACTAAAA+AGG	-	chr1.2:8269778-8269797	None:intergenic	30.0%
!	TAGTTGATACCAAATTGCTA+AGG	-	chr1.2:8269974-8269993	None:intergenic	30.0%
!	TTTTCTTGGATTAAGTGCTT+TGG	+	chr1.2:8269713-8269732	MS.gene060884:CDS	30.0%
!!	AAAGGTTTCGTATGTTTTGA+TGG	+	chr1.2:8270085-8270104	MS.gene060884:CDS	30.0%
!!	ATCTTCAGATGGTATTGATT+CGG	+	chr1.2:8269665-8269684	MS.gene060884:CDS	30.0%
!!!	TGTTGTTTTGCAAACTCAAT+TGG	-	chr1.2:8270430-8270449	None:intergenic	30.0%
	AATTTGGTATCAACTAGAGC+AGG	+	chr1.2:8269978-8269997	MS.gene060884:CDS	35.0%
	ACATGAGGAAAATTGTGAAG+AGG	+	chr1.2:8270447-8270466	MS.gene060884:CDS	35.0%
	ATAAACTCAATTGGCGACAT+GGG	+	chr1.2:8269924-8269943	MS.gene060884:CDS	35.0%
	ATAAAGGGAAACAGGTTTCA+GGG	+	chr1.2:8270246-8270265	MS.gene060884:CDS	35.0%
	CATGAGGAAAATTGTGAAGA+GGG	+	chr1.2:8270448-8270467	MS.gene060884:CDS	35.0%
	CCAAATTGCTAAGGATTGAA+AGG	-	chr1.2:8269965-8269984	None:intergenic	35.0%
	CCGTTTCTGATAAACTCAAT+TGG	+	chr1.2:8269915-8269934	MS.gene060884:CDS	35.0%
	CCTTTCAATCCTTAGCAATT+TGG	+	chr1.2:8269962-8269981	MS.gene060884:CDS	35.0%
	GAGAATAGATAAAGGGAAAC+AGG	+	chr1.2:8270238-8270257	MS.gene060884:CDS	35.0%
	GTACTACTTTGACTCAGAAA+CGG	+	chr1.2:8270192-8270211	MS.gene060884:CDS	35.0%
	TAAATCTTATGGTGACAAGC+AGG	+	chr1.2:8270118-8270137	MS.gene060884:CDS	35.0%
	TACTACTTTGACTCAGAAAC+GGG	+	chr1.2:8270193-8270212	MS.gene060884:CDS	35.0%
	TCTTGGTCGATGTATTGAAT+TGG	+	chr1.2:8270039-8270058	MS.gene060884:CDS	35.0%
	TGAGTTTGCAAAACAACATG+AGG	+	chr1.2:8270432-8270451	MS.gene060884:CDS	35.0%
	TTCAATACATCGACCAAGAT+AGG	-	chr1.2:8270038-8270057	None:intergenic	35.0%
!	AAACATACGAAACCTTTTCC+TGG	-	chr1.2:8270082-8270101	None:intergenic	35.0%
	ACCAAGATAGGAAACACATC+CGG	-	chr1.2:8270026-8270045	None:intergenic	40.0%
	ACGATGAAGTTCCGCAAATT+GGG	-	chr1.2:8270307-8270326	None:intergenic	40.0%
	ATCAACTAGAGCAGGTAGAA+AGG	+	chr1.2:8269986-8270005	MS.gene060884:CDS	40.0%
	GACTATATCTTGAGGCAAGT+TGG	-	chr1.2:8270474-8270493	None:intergenic	40.0%
	GATAAACTCAATTGGCGACA+TGG	+	chr1.2:8269923-8269942	MS.gene060884:CDS	40.0%
	GATAAAGGGAAACAGGTTTC+AGG	+	chr1.2:8270245-8270264	MS.gene060884:CDS	40.0%
	GGGAACTACAACGGAAATTT+AGG	+	chr1.2:8270266-8270285	MS.gene060884:CDS	40.0%
	TCTGATGGGACTATATCTTG+AGG	-	chr1.2:8270482-8270501	None:intergenic	40.0%
!	CTTCTTGAGTTGTCGCTTAT+TGG	+	chr1.2:8270170-8270189	MS.gene060884:CDS	40.0%
!	GCGATTGTTGCGAATTTTCT+TGG	+	chr1.2:8269699-8269718	MS.gene060884:CDS	40.0%
!!	TTCAGATGGTATTGATTCGG+CGG	+	chr1.2:8269668-8269687	MS.gene060884:CDS	40.0%
	CAGGTTTCAGGGAACTACAA+CGG	+	chr1.2:8270257-8270276	MS.gene060884:CDS	45.0%
	CCAAGATAGGAAACACATCC+GGG	-	chr1.2:8270025-8270044	None:intergenic	45.0%
	CGATGAAGTTCCGCAAATTG+GGG	-	chr1.2:8270306-8270325	None:intergenic	45.0%
	GAATGATTCACCTGAATGCC+AGG	+	chr1.2:8270061-8270080	MS.gene060884:CDS	45.0%
	GACGATGAAGTTCCGCAAAT+TGG	-	chr1.2:8270308-8270327	None:intergenic	45.0%
	GCAGCTGAAGACCCAATTAT+CGG	-	chr1.2:8269750-8269769	None:intergenic	45.0%
	TTCACCTGAATGCCAGGAAA+AGG	+	chr1.2:8270067-8270086	MS.gene060884:CDS	45.0%
!	AAAGGCAATAAGTGCTGTCC+CGG	+	chr1.2:8270004-8270023	MS.gene060884:CDS	45.0%
!	GAAACCTTTTCCTGGCATTC+AGG	-	chr1.2:8270074-8270093	None:intergenic	45.0%
!!	AGGAGGAGGAAAAGAGTGTT+CGG	+	chr1.2:8270352-8270371	MS.gene060884:CDS	45.0%
	ACTGTCTCTGCCCCAATTTG+CGG	+	chr1.2:8270293-8270312	MS.gene060884:CDS	50.0%
	CCCGGATGTGTTTCCTATCT+TGG	+	chr1.2:8270022-8270041	MS.gene060884:CDS	50.0%
	TCGTCGTGTGCAAAACCAGA+TGG	+	chr1.2:8270323-8270342	MS.gene060884:CDS	50.0%
	TCGTGTGCAAAACCAGATGG+AGG	+	chr1.2:8270326-8270345	MS.gene060884:CDS	50.0%
	TGTGCAAAACCAGATGGAGG+AGG	+	chr1.2:8270329-8270348	MS.gene060884:CDS	50.0%
	AAACCAGATGGAGGAGGAGG+AGG	+	chr1.2:8270335-8270354	MS.gene060884:CDS	55.0%
	CACAATCCCTGCCTCGATCA+TGG	-	chr1.2:8270144-8270163	None:intergenic	55.0%
	GCAAAACCAGATGGAGGAGG+AGG	+	chr1.2:8270332-8270351	MS.gene060884:CDS	55.0%
	TGACAAGCAGGCCATGATCG+AGG	+	chr1.2:8270130-8270149	MS.gene060884:CDS	55.0%
	AAGCAGGCCATGATCGAGGC+AGG	+	chr1.2:8270134-8270153	MS.gene060884:CDS	60.0%
	AGCAGGCCATGATCGAGGCA+GGG	+	chr1.2:8270135-8270154	MS.gene060884:CDS	60.0%
!	TGACTCAGAAACGGGCGTCG+AGG	+	chr1.2:8270201-8270220	MS.gene060884:CDS	60.0%
!!	GAAACGGGCGTCGAGGCTAT+TGG	+	chr1.2:8270208-8270227	MS.gene060884:CDS	60.0%
	CCAGATGGAGGAGGAGGAGG+AGG	+	chr1.2:8270338-8270357	MS.gene060884:CDS	65.0%
	CCTCCTCCTCCTCCTCCATC+TGG	-	chr1.2:8270341-8270360	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	8269648	8270553	8269648	ID=MS.gene060884
chr1.2	mRNA	8269648	8270553	8269648	ID=MS.gene060884.t1;Parent=MS.gene060884
chr1.2	exon	8269648	8270553	8269648	ID=MS.gene060884.t1.exon1;Parent=MS.gene060884.t1
chr1.2	CDS	8269648	8270553	8269648	ID=cds.MS.gene060884.t1;Parent=MS.gene060884.t1

Gene Sequence

>MS.gene060884

ATGCTTAAGCTTATTGAATCTTCAGATGGTATTGATTCGGCGGTTTCTGAAGCGATTGTTGCGAATTTTCTTGGATTAAGTGCTTTGGATTCGAATAAACCGATAATTGGGTCTTCAGCTGCAATACCCTTTTTAGTTAGAACTCTTCAGAATAAGAATATAGATAAGAAAAGTAGCAATCAAGTTAAGCAAGATGCTCTTAGAGCACTTTACAATCTTTCAATCTTCCCAGCCAATGTTCAGTTTATTTTGGAAACTGATTTGGTACCGTTTCTGATAAACTCAATTGGCGACATGGGAGTAACTGAAAGAAACCTTTCAATCCTTAGCAATTTGGTATCAACTAGAGCAGGTAGAAAGGCAATAAGTGCTGTCCCGGATGTGTTTCCTATCTTGGTCGATGTATTGAATTGGAATGATTCACCTGAATGCCAGGAAAAGGTTTCGTATGTTTTGATGGTTATGTCGCATAAATCTTATGGTGACAAGCAGGCCATGATCGAGGCAGGGATTGTGTCGTCGCTTCTTGAGTTGTCGCTTATTGGTACTACTTTGACTCAGAAACGGGCGTCGAGGCTATTGGAAAGTTTGAGAATAGATAAAGGGAAACAGGTTTCAGGGAACTACAACGGAAATTTAGGTGCAACTGTCTCTGCCCCAATTTGCGGAACTTCATCGTCGTGTGCAAAACCAGATGGAGGAGGAGGAGGAGGAAAAGAGTGTTCGGAAGAAGATGAAGATATGATGAGCGAAGAGAAGAAAGCAGTGAAGCAATTAGTCCAATTGAGTTTGCAAAACAACATGAGGAAAATTGTGAAGAGGGCCAACTTGCCTCAAGATATAGTCCCATCAGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCAAAGAGTTTACCATTCTGA

Protein sequence

>MS.gene060884.t1

MLKLIESSDGIDSAVSEAIVANFLGLSALDSNKPIIGSSAAIPFLVRTLQNKNIDKKSSNQVKQDALRALYNLSIFPANVQFILETDLVPFLINSIGDMGVTERNLSILSNLVSTRAGRKAISAVPDVFPILVDVLNWNDSPECQEKVSYVLMVMSHKSYGDKQAMIEAGIVSSLLELSLIGTTLTQKRASRLLESLRIDKGKQVSGNYNGNLGATVSAPICGTSSSCAKPDGGGGGGKECSEEDEDMMSEEKKAVKQLVQLSLQNNMRKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF