Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34452.t1 | XP_003592309.1 | 98.5 | 262 | 4 | 0 | 1 | 262 | 72 | 333 | 1.10E-127 | 466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34452.t1 | Q0WUQ1 | 51.1 | 266 | 113 | 5 | 1 | 262 | 90 | 342 | 9.8e-61 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34452.t1 | G7IAQ7 | 98.5 | 262 | 4 | 0 | 1 | 262 | 72 | 333 | 7.9e-128 | 466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene34452 | 0.825401 | 4.78E-54 | -1.69E-46 |
| MS.gene04917 | MS.gene34452 | 0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene049887 | MS.gene34452 | 0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene34452 | 0.828909 | 6.92E-55 | -1.69E-46 |
| MS.gene056752 | MS.gene34452 | 0.800245 | 1.58E-48 | -1.69E-46 |
| MS.gene058758 | MS.gene34452 | 0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene060563 | MS.gene34452 | 0.816857 | 4.45E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene34452 | 0.820527 | 6.54E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAATTACAACCAAGTT+TGG | 0.308165 | 1.2:+75787783 | MS.gene34452:CDS |
| AAGTTGTAGTTACTACAAAA+TGG | 0.317039 | 1.2:+75787890 | MS.gene34452:CDS |
| CAACTAGAAGGCATGTCTAT+TGG | 0.328595 | 1.2:+75787757 | MS.gene34452:CDS |
| AAAATGTTAACCGGTCCAAC+TGG | 0.346168 | 1.2:+75786467 | MS.gene34452:CDS |
| CTGAAAATTAAGAATTCTAA+TGG | 0.350736 | 1.2:+75787676 | MS.gene34452:CDS |
| TTGGAAGTAGATAGGCTTGC+AGG | 0.354563 | 1.2:+75786686 | MS.gene34452:CDS |
| GCTGAAGTGACAGGAATTAA+TGG | 0.377943 | 1.2:-75787934 | None:intergenic |
| AACTAGAAGGCATGTCTATT+GGG | 0.380751 | 1.2:+75787758 | MS.gene34452:CDS |
| CCTTCTAGTTGCTCATCAAT+TGG | 0.382641 | 1.2:-75787745 | None:intergenic |
| CAGTTCATCCCAAGTTCAAA+TGG | 0.385056 | 1.2:+75787986 | MS.gene34452:CDS |
| AAGGCATTTCTTGACATAGT+AGG | 0.386721 | 1.2:+75786542 | MS.gene34452:CDS |
| AGTAGATAGGCTTGCAGGGC+AGG | 0.406809 | 1.2:+75786691 | MS.gene34452:CDS |
| TACCTCTTCTCTTGAGCAAT+AGG | 0.407029 | 1.2:-75786602 | None:intergenic |
| ACAAAAGTATGTTGAAACTT+TGG | 0.410750 | 1.2:+75787648 | MS.gene34452:CDS |
| AAATTAGCTTGGAAGTAGAT+AGG | 0.412929 | 1.2:+75786678 | MS.gene34452:CDS |
| GAAGTGTTCCCATTTGAACT+TGG | 0.421460 | 1.2:-75787995 | None:intergenic |
| CCAATTGATGAGCAACTAGA+AGG | 0.428546 | 1.2:+75787745 | MS.gene34452:CDS |
| TAAAGATAAATCAAAGTTAG+TGG | 0.440071 | 1.2:+75786568 | MS.gene34452:CDS |
| TGTGATTGTTGCTCCAAACT+TGG | 0.451240 | 1.2:-75787796 | None:intergenic |
| CAATCACAAAGGAACTCAAA+TGG | 0.451414 | 1.2:+75787811 | MS.gene34452:CDS |
| TAAATCAAAGTTAGTGGTGA+TGG | 0.454330 | 1.2:+75786574 | MS.gene34452:CDS |
| GCTTAAGTTGGATGGTATAG+TGG | 0.470152 | 1.2:+75786889 | MS.gene34452:CDS |
| ATCTATTTCAGAAATTAGCT+TGG | 0.470708 | 1.2:+75786667 | MS.gene34452:CDS |
| TGCTCAAGAGAAGAGGTACT+TGG | 0.472792 | 1.2:+75786607 | MS.gene34452:CDS |
| AATCACAAAGGAACTCAAAT+GGG | 0.487364 | 1.2:+75787812 | MS.gene34452:CDS |
| GATGAATCAGTTGCTTAAGT+TGG | 0.489833 | 1.2:+75786877 | MS.gene34452:CDS |
| AGTTGTAGTTACTACAAAAT+GGG | 0.490238 | 1.2:+75787891 | MS.gene34452:CDS |
| GGGATGAACTGAATTATTAG+TGG | 0.493980 | 1.2:-75787974 | None:intergenic |
| AAGTGTTCCCATTTGAACTT+GGG | 0.507977 | 1.2:-75787994 | None:intergenic |
| AGTTCATCCCAAGTTCAAAT+GGG | 0.515662 | 1.2:+75787987 | MS.gene34452:CDS |
| GTGGTGTATCCCAGTTGGAC+CGG | 0.518541 | 1.2:-75786477 | None:intergenic |
| AATCAGTTGCTTAAGTTGGA+TGG | 0.521756 | 1.2:+75786881 | MS.gene34452:CDS |
| TGGATGGTATAGTGGCTGAT+GGG | 0.523352 | 1.2:+75786897 | MS.gene34452:CDS |
| TCTAGTTGCTCATCAATTGG+AGG | 0.528067 | 1.2:-75787742 | None:intergenic |
| GAATTGAAGAAAATGTTAAC+CGG | 0.528236 | 1.2:+75786458 | MS.gene34452:CDS |
| CTCGAAACAATAATTAGTAA+AGG | 0.528826 | 1.2:+75786809 | MS.gene34452:CDS |
| AAACAAGGAGAGGGATTCAA+AGG | 0.544060 | 1.2:+75786523 | MS.gene34452:CDS |
| TCTTGGTGGTGTATCCCAGT+TGG | 0.549913 | 1.2:-75786482 | None:intergenic |
| GATGAGGATGCTGAAGTGAC+AGG | 0.550910 | 1.2:-75787943 | None:intergenic |
| GAAACAATAATTAGTAAAGG+TGG | 0.554611 | 1.2:+75786812 | MS.gene34452:CDS |
| TGGAAGTAGATAGGCTTGCA+GGG | 0.562410 | 1.2:+75786687 | MS.gene34452:CDS |
| AAACAATAATTAGTAAAGGT+GGG | 0.565385 | 1.2:+75786813 | MS.gene34452:CDS |
| TTGGATGGTATAGTGGCTGA+TGG | 0.567402 | 1.2:+75786896 | MS.gene34452:CDS |
| GGATGGTATAGTGGCTGATG+GGG | 0.575853 | 1.2:+75786898 | MS.gene34452:CDS |
| TAAATTGCAGAGGAAAATGC+AGG | 0.597959 | 1.2:+75786925 | MS.gene34452:CDS |
| ATCAAAGTTAGTGGTGATGG+AGG | 0.599290 | 1.2:+75786577 | MS.gene34452:CDS |
| TCTGAGGTAGAATTCGTAGA+GGG | 0.608688 | 1.2:-75787868 | None:intergenic |
| ATCCTATTGCTCAAGAGAAG+AGG | 0.610825 | 1.2:+75786600 | MS.gene34452:CDS |
| AAATGTTAACCGGTCCAACT+GGG | 0.615599 | 1.2:+75786468 | MS.gene34452:CDS |
| TGTAGTAACTACAACTTCTG+AGG | 0.617406 | 1.2:-75787884 | None:intergenic |
| AAAATTAAGAATTCTAATGG+AGG | 0.640605 | 1.2:+75787679 | MS.gene34452:CDS |
| ATGGGGATGTTAAATTGCAG+AGG | 0.645911 | 1.2:+75786915 | MS.gene34452:CDS |
| TTCTGAGGTAGAATTCGTAG+AGG | 0.661653 | 1.2:-75787869 | None:intergenic |
| ATTAGTGGATGAGCTTGATG+AGG | 0.662225 | 1.2:-75787959 | None:intergenic |
| GTTTGGAGCAACAATCACAA+AGG | 0.714476 | 1.2:+75787800 | MS.gene34452:CDS |
| GAAGTGACAGGAATTAATGG+TGG | 0.757122 | 1.2:-75787931 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAAATTAGATGTTA+GGG | - | chr1.2:75787128-75787147 | None:intergenic | 10.0% |
| !! | TAAAATTAAGTCATTTAAAA+TGG | - | chr1.2:75787227-75787246 | None:intergenic | 10.0% |
| !! | AAAAAATATAAAGATGGAAA+GGG | + | chr1.2:75786637-75786656 | MS.gene34452:CDS | 15.0% |
| !! | AATGAGAAAAAATATAAAGA+TGG | + | chr1.2:75786631-75786650 | MS.gene34452:CDS | 15.0% |
| !! | ATATTTAATGCTTGAATAAT+TGG | + | chr1.2:75786746-75786765 | MS.gene34452:intron | 15.0% |
| !! | CATTAATAAAATTAGATGTT+AGG | - | chr1.2:75787129-75787148 | None:intergenic | 15.0% |
| !!! | ACATTCATTAATGATTTTAT+TGG | + | chr1.2:75787568-75787587 | MS.gene34452:intron | 15.0% |
| !!! | TATAAAATATTTTTTGGTCT+TGG | - | chr1.2:75786502-75786521 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTATGATAAGGT+TGG | + | chr1.2:75786718-75786737 | MS.gene34452:intron | 15.0% |
| !! | AAAAATCATGACATCTAATT+TGG | + | chr1.2:75787055-75787074 | MS.gene34452:intron | 20.0% |
| !! | AAAATTAAGAATTCTAATGG+AGG | + | chr1.2:75787679-75787698 | MS.gene34452:CDS | 20.0% |
| !! | AAACAATAATTAGTAAAGGT+GGG | + | chr1.2:75786813-75786832 | MS.gene34452:CDS | 20.0% |
| !! | AATTATAGCATATAAGATGT+TGG | + | chr1.2:75787307-75787326 | MS.gene34452:intron | 20.0% |
| !! | CTGAAAATTAAGAATTCTAA+TGG | + | chr1.2:75787676-75787695 | MS.gene34452:CDS | 20.0% |
| !! | GAAAAAATATAAAGATGGAA+AGG | + | chr1.2:75786636-75786655 | MS.gene34452:CDS | 20.0% |
| !! | TAAAGATAAATCAAAGTTAG+TGG | + | chr1.2:75786568-75786587 | MS.gene34452:CDS | 20.0% |
| !!! | ATGGTAGTTAATAATTTTGA+AGG | + | chr1.2:75787615-75787634 | MS.gene34452:intron | 20.0% |
| !!! | ATTTTATAAAAACAAGGAGA+GGG | + | chr1.2:75786514-75786533 | MS.gene34452:CDS | 20.0% |
| !!! | TATTTTATAAAAACAAGGAG+AGG | + | chr1.2:75786513-75786532 | MS.gene34452:CDS | 20.0% |
| !!! | TTAAGTCATTTAAAATGGAA+CGG | - | chr1.2:75787222-75787241 | None:intergenic | 20.0% |
| ! | AAGTTGTAGTTACTACAAAA+TGG | + | chr1.2:75787890-75787909 | MS.gene34452:CDS | 25.0% |
| ! | AGTTGTAGTTACTACAAAAT+GGG | + | chr1.2:75787891-75787910 | MS.gene34452:CDS | 25.0% |
| ! | ATCTATTTCAGAAATTAGCT+TGG | + | chr1.2:75786667-75786686 | MS.gene34452:CDS | 25.0% |
| ! | ATGAAAATAACATTTAGTCC+CGG | + | chr1.2:75787083-75787102 | MS.gene34452:intron | 25.0% |
| ! | ATGATATGAATTGCTTGATT+AGG | + | chr1.2:75786778-75786797 | MS.gene34452:intron | 25.0% |
| ! | CTCGAAACAATAATTAGTAA+AGG | + | chr1.2:75786809-75786828 | MS.gene34452:CDS | 25.0% |
| ! | GAAACAATAATTAGTAAAGG+TGG | + | chr1.2:75786812-75786831 | MS.gene34452:CDS | 25.0% |
| ! | GAATTGAAGAAAATGTTAAC+CGG | + | chr1.2:75786458-75786477 | MS.gene34452:CDS | 25.0% |
| ! | GATACTTAAGATCAAAATTG+TGG | + | chr1.2:75787387-75787406 | MS.gene34452:intron | 25.0% |
| ! | TAGTACATTATTGCTTCTAA+TGG | + | chr1.2:75787596-75787615 | MS.gene34452:intron | 25.0% |
| ! | TCAACTGTGTCATATAATAT+AGG | + | chr1.2:75787429-75787448 | MS.gene34452:intron | 25.0% |
| ! | TCAATTTAAGAGGAAATCTA+AGG | - | chr1.2:75787002-75787021 | None:intergenic | 25.0% |
| ! | TCATAAATTACAACCAAGTT+TGG | + | chr1.2:75787783-75787802 | MS.gene34452:CDS | 25.0% |
| ! | TTTATTAATGTGTCCACTTT+AGG | + | chr1.2:75787139-75787158 | MS.gene34452:intron | 25.0% |
| !! | ACAAAAGTATGTTGAAACTT+TGG | + | chr1.2:75787648-75787667 | MS.gene34452:CDS | 25.0% |
| !!! | AAAATATTTTTTGGTCTTGG+TGG | - | chr1.2:75786499-75786518 | None:intergenic | 25.0% |
| !!! | CACTCTAAAATCAATTTAAG+AGG | - | chr1.2:75787012-75787031 | None:intergenic | 25.0% |
| AATCACAAAGGAACTCAAAT+GGG | + | chr1.2:75787812-75787831 | MS.gene34452:CDS | 30.0% | |
| TAAATCAAAGTTAGTGGTGA+TGG | + | chr1.2:75786574-75786593 | MS.gene34452:CDS | 30.0% | |
| TGTCATATAATATAGGACGA+CGG | + | chr1.2:75787436-75787455 | MS.gene34452:intron | 30.0% | |
| ! | AAATTAGCTTGGAAGTAGAT+AGG | + | chr1.2:75786678-75786697 | MS.gene34452:CDS | 30.0% |
| !! | TTTGTTGAGGCTTTTTCTTT+GGG | - | chr1.2:75787711-75787730 | None:intergenic | 30.0% |
| !! | TTTTGTTGAGGCTTTTTCTT+TGG | - | chr1.2:75787712-75787731 | None:intergenic | 30.0% |
| !!! | GGCAATTTTACTTTTTGTTG+AGG | - | chr1.2:75787724-75787743 | None:intergenic | 30.0% |
| AACATTTAGTCCCGGAAAAA+CGG | + | chr1.2:75787091-75787110 | MS.gene34452:intron | 35.0% | |
| AAGTGTTCCCATTTGAACTT+GGG | - | chr1.2:75787997-75788016 | None:intergenic | 35.0% | |
| AGTTCATCCCAAGTTCAAAT+GGG | + | chr1.2:75787987-75788006 | MS.gene34452:CDS | 35.0% | |
| ATATAATATAGGACGACGGA+GGG | + | chr1.2:75787440-75787459 | MS.gene34452:intron | 35.0% | |
| CAATCACAAAGGAACTCAAA+TGG | + | chr1.2:75787811-75787830 | MS.gene34452:CDS | 35.0% | |
| GATGAATCAGTTGCTTAAGT+TGG | + | chr1.2:75786877-75786896 | MS.gene34452:CDS | 35.0% | |
| GGGATGAACTGAATTATTAG+TGG | - | chr1.2:75787977-75787996 | None:intergenic | 35.0% | |
| TAAATTGCAGAGGAAAATGC+AGG | + | chr1.2:75786925-75786944 | MS.gene34452:CDS | 35.0% | |
| TGTAGTAACTACAACTTCTG+AGG | - | chr1.2:75787887-75787906 | None:intergenic | 35.0% | |
| ! | AACTAGAAGGCATGTCTATT+GGG | + | chr1.2:75787758-75787777 | MS.gene34452:CDS | 35.0% |
| ! | AAGGCATTTCTTGACATAGT+AGG | + | chr1.2:75786542-75786561 | MS.gene34452:CDS | 35.0% |
| !! | AATCAGTTGCTTAAGTTGGA+TGG | + | chr1.2:75786881-75786900 | MS.gene34452:CDS | 35.0% |
| !! | ACTAAGTTATCCCGTTTTTC+CGG | - | chr1.2:75787105-75787124 | None:intergenic | 35.0% |
| AAAATGTTAACCGGTCCAAC+TGG | + | chr1.2:75786467-75786486 | MS.gene34452:CDS | 40.0% | |
| AAACAAGGAGAGGGATTCAA+AGG | + | chr1.2:75786523-75786542 | MS.gene34452:CDS | 40.0% | |
| AAATGGGAACACTTCGAGTA+AGG | + | chr1.2:75788003-75788022 | MS.gene34452:CDS | 40.0% | |
| AAATGTTAACCGGTCCAACT+GGG | + | chr1.2:75786468-75786487 | MS.gene34452:CDS | 40.0% | |
| AATGGGAACACTTCGAGTAA+GGG | + | chr1.2:75788004-75788023 | MS.gene34452:CDS | 40.0% | |
| ACATTTAGTCCCGGAAAAAC+GGG | + | chr1.2:75787092-75787111 | MS.gene34452:intron | 40.0% | |
| ATCCTATTGCTCAAGAGAAG+AGG | + | chr1.2:75786600-75786619 | MS.gene34452:CDS | 40.0% | |
| ATGGGGATGTTAAATTGCAG+AGG | + | chr1.2:75786915-75786934 | MS.gene34452:CDS | 40.0% | |
| CAGTTCATCCCAAGTTCAAA+TGG | + | chr1.2:75787986-75788005 | MS.gene34452:CDS | 40.0% | |
| CATATAATATAGGACGACGG+AGG | + | chr1.2:75787439-75787458 | MS.gene34452:intron | 40.0% | |
| CCAATTGATGAGCAACTAGA+AGG | + | chr1.2:75787745-75787764 | MS.gene34452:CDS | 40.0% | |
| GAAGTGACAGGAATTAATGG+TGG | - | chr1.2:75787934-75787953 | None:intergenic | 40.0% | |
| GCTGAAGTGACAGGAATTAA+TGG | - | chr1.2:75787937-75787956 | None:intergenic | 40.0% | |
| TACCTCTTCTCTTGAGCAAT+AGG | - | chr1.2:75786605-75786624 | None:intergenic | 40.0% | |
| TCTAGTTGCTCATCAATTGG+AGG | - | chr1.2:75787745-75787764 | None:intergenic | 40.0% | |
| TGTGATTGTTGCTCCAAACT+TGG | - | chr1.2:75787799-75787818 | None:intergenic | 40.0% | |
| ! | ATTAGTGGATGAGCTTGATG+AGG | - | chr1.2:75787962-75787981 | None:intergenic | 40.0% |
| ! | CAACTAGAAGGCATGTCTAT+TGG | + | chr1.2:75787757-75787776 | MS.gene34452:CDS | 40.0% |
| ! | CCTTCTAGTTGCTCATCAAT+TGG | - | chr1.2:75787748-75787767 | None:intergenic | 40.0% |
| ! | GAAGTGTTCCCATTTGAACT+TGG | - | chr1.2:75787998-75788017 | None:intergenic | 40.0% |
| ! | GTTTGGAGCAACAATCACAA+AGG | + | chr1.2:75787800-75787819 | MS.gene34452:CDS | 40.0% |
| ! | TCTGAGGTAGAATTCGTAGA+GGG | - | chr1.2:75787871-75787890 | None:intergenic | 40.0% |
| !! | ATCAAAGTTAGTGGTGATGG+AGG | + | chr1.2:75786577-75786596 | MS.gene34452:CDS | 40.0% |
| !! | CTAAGTTATCCCGTTTTTCC+GGG | - | chr1.2:75787104-75787123 | None:intergenic | 40.0% |
| !! | GCTTAAGTTGGATGGTATAG+TGG | + | chr1.2:75786889-75786908 | MS.gene34452:CDS | 40.0% |
| !! | TTCTGAGGTAGAATTCGTAG+AGG | - | chr1.2:75787872-75787891 | None:intergenic | 40.0% |
| GTGTCCACTTTAGGTCACAA+GGG | + | chr1.2:75787148-75787167 | MS.gene34452:intron | 45.0% | |
| TGGAAGTAGATAGGCTTGCA+GGG | + | chr1.2:75786687-75786706 | MS.gene34452:CDS | 45.0% | |
| TGGATGGTATAGTGGCTGAT+GGG | + | chr1.2:75786897-75786916 | MS.gene34452:CDS | 45.0% | |
| TGTGTCCACTTTAGGTCACA+AGG | + | chr1.2:75787147-75787166 | MS.gene34452:intron | 45.0% | |
| TTGGAAGTAGATAGGCTTGC+AGG | + | chr1.2:75786686-75786705 | MS.gene34452:CDS | 45.0% | |
| TTGGATGGTATAGTGGCTGA+TGG | + | chr1.2:75786896-75786915 | MS.gene34452:CDS | 45.0% | |
| TTGTCCCTTGTGACCTAAAG+TGG | - | chr1.2:75787155-75787174 | None:intergenic | 45.0% | |
| !! | TGCTCAAGAGAAGAGGTACT+TGG | + | chr1.2:75786607-75786626 | MS.gene34452:CDS | 45.0% |
| !!! | AAAAATATTTTATAAAAACA+AGG | + | chr1.2:75786508-75786527 | MS.gene34452:CDS | 5.0% |
| !!! | TAAATTTTTTTTTTATGATA+AGG | + | chr1.2:75786714-75786733 | MS.gene34452:intron | 5.0% |
| !!! | TGTTTTTATAAAATATTTTT+TGG | - | chr1.2:75786508-75786527 | None:intergenic | 5.0% |
| GATGAGGATGCTGAAGTGAC+AGG | - | chr1.2:75787946-75787965 | None:intergenic | 50.0% | |
| GGATGGTATAGTGGCTGATG+GGG | + | chr1.2:75786898-75786917 | MS.gene34452:CDS | 50.0% | |
| ! | GTGGATTGACAGACGTGACA+GGG | + | chr1.2:75787406-75787425 | MS.gene34452:intron | 50.0% |
| ! | TGTGGATTGACAGACGTGAC+AGG | + | chr1.2:75787405-75787424 | MS.gene34452:intron | 50.0% |
| !! | TCTTGGTGGTGTATCCCAGT+TGG | - | chr1.2:75786485-75786504 | None:intergenic | 50.0% |
| AGTAGATAGGCTTGCAGGGC+AGG | + | chr1.2:75786691-75786710 | MS.gene34452:CDS | 55.0% | |
| GTGGTGTATCCCAGTTGGAC+CGG | - | chr1.2:75786480-75786499 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75786456 | 75788023 | 75786456 | ID=MS.gene34452 |
| chr1.2 | mRNA | 75786456 | 75788023 | 75786456 | ID=MS.gene34452.t1;Parent=MS.gene34452 |
| chr1.2 | exon | 75786456 | 75786712 | 75786456 | ID=MS.gene34452.t1.exon1;Parent=MS.gene34452.t1 |
| chr1.2 | CDS | 75786456 | 75786712 | 75786456 | ID=cds.MS.gene34452.t1;Parent=MS.gene34452.t1 |
| chr1.2 | exon | 75786800 | 75786946 | 75786800 | ID=MS.gene34452.t1.exon2;Parent=MS.gene34452.t1 |
| chr1.2 | CDS | 75786800 | 75786946 | 75786800 | ID=cds.MS.gene34452.t1;Parent=MS.gene34452.t1 |
| chr1.2 | exon | 75787637 | 75788023 | 75787637 | ID=MS.gene34452.t1.exon3;Parent=MS.gene34452.t1 |
| chr1.2 | CDS | 75787637 | 75788023 | 75787637 | ID=cds.MS.gene34452.t1;Parent=MS.gene34452.t1 |
| Gene Sequence |
| Protein sequence |
