AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050941


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050941.t1 MTR_7g112410 90.653 674 26 3 68 706 233 904 0.0 1244
MS.gene050941.t1 MTR_7g112410 87.963 108 10 1 1 108 1 105 1.81e-47 181
MS.gene050941.t1 MTR_7g112410 89.789 617 26 3 68 649 233 847 0.0 1121
MS.gene050941.t1 MTR_7g112410 87.963 108 10 1 1 108 1 105 1.11e-47 181
MS.gene050941.t1 MTR_4g110090 40.650 123 68 3 263 381 68 189 6.85e-22 100
MS.gene050941.t1 MTR_4g110090 42.424 99 55 1 596 694 513 609 1.80e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050941.t1 AT3G05670 44.464 569 244 18 178 706 346 882 2.03e-124 392
MS.gene050941.t1 AT3G05670 44.464 569 244 18 178 706 346 882 2.03e-124 392
MS.gene050941.t1 AT3G05670 44.464 569 244 18 178 706 346 882 2.03e-124 392

Find 188 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTATATGGCCTGGAATTT+TGG 0.124200 7.1:+3688678 MS.gene050941:CDS
CCTTGAATTGCTCATTCTTA+TGG 0.185613 7.1:-3688605 None:intergenic
AGATGTGGTTAAAAGTATTT+TGG 0.206841 7.1:+3689287 MS.gene050941:CDS
TGAATAGCCCTGAAATTAAT+AGG 0.209679 7.1:+3688467 MS.gene050941:CDS
CTTGGTTCCCTATTAATTTC+AGG 0.214253 7.1:-3688475 None:intergenic
CTTTCGTCTTCTCTTTCTCT+TGG 0.260528 7.1:-3687162 None:intergenic
CTGCTATTTGTTCTGATGGC+TGG 0.262892 7.1:-3687245 None:intergenic
CACACTTATTGTGTTGGTTT+GGG 0.278946 7.1:+3688037 MS.gene050941:CDS
GGGTCTCCATTCTGCATAAA+TGG 0.287184 7.1:-3688577 None:intergenic
TTCAAGGGGCCCAGTGGTTC+AGG 0.296545 7.1:+3688621 MS.gene050941:CDS
ATTGTCTCAAGAAGCTGATT+TGG 0.302977 7.1:+3688858 MS.gene050941:CDS
ACATCAACCTTATCAGATTA+TGG 0.305141 7.1:+3688703 MS.gene050941:CDS
CGATGAGGATTATGTGGTTT+CGG 0.319604 7.1:+3686395 MS.gene050941:CDS
CAACTCAAAGCCTGCCTTCC+CGG 0.326688 7.1:+3688158 MS.gene050941:CDS
ATCCTTGAAGATGCCAATTC+CGG 0.338850 7.1:+3687299 MS.gene050941:CDS
CTTCTAGCAGAGGTCGAAAA+AGG 0.347985 7.1:+3687114 MS.gene050941:CDS
GTGCAGGCTTACTGATTGTT+TGG 0.350078 7.1:-3687736 None:intergenic
ACACACTTATTGTGTTGGTT+TGG 0.353037 7.1:+3688036 MS.gene050941:CDS
TTCAAATACCTGATCACGTT+CGG 0.363155 7.1:-3687795 None:intergenic
GAGAAGTACCTGAAGGTAAT+TGG 0.364011 7.1:+3688062 MS.gene050941:CDS
CTTTCTGCTATTTGTTCTGA+TGG 0.368521 7.1:-3687249 None:intergenic
CTCGCAATCTGAGCCGGAAT+TGG 0.377934 7.1:-3687312 None:intergenic
GGCCTGTGAATGCAGCTATA+TGG 0.385787 7.1:+3688665 MS.gene050941:CDS
CAGGTGATGGCCGGGAAGGC+AGG 0.388209 7.1:-3688168 None:intergenic
TTTCGTCTTCTCTTTCTCTT+GGG 0.388977 7.1:-3687161 None:intergenic
CTGCTGCTGCATGGGTGGAT+TGG 0.389809 7.1:-3688727 None:intergenic
TCTTCACAGTGGTTACGATT+AGG 0.391290 7.1:+3689321 MS.gene050941:CDS
TTGTCTCAAGAAGCTGATTT+GGG 0.400095 7.1:+3688859 MS.gene050941:CDS
GAGTCCACAAGCAGCGAGTA+TGG 0.405089 7.1:-3689136 None:intergenic
TAAATCAGATTCTTGAGCTT+GGG 0.405889 7.1:-3688128 None:intergenic
CTCCTGAGTTCTTCTTCAGT+TGG 0.407979 7.1:-3687917 None:intergenic
GTTGATGTCCCCAAAATTCC+AGG 0.409316 7.1:-3688688 None:intergenic
CCCCACATTGAATTAATTGC+TGG 0.411682 7.1:+3689207 MS.gene050941:CDS
TGCTATTTGTTCTGATGGCT+GGG 0.413685 7.1:-3687244 None:intergenic
ACAAGTGCCCGAACGTGATC+AGG 0.415339 7.1:+3687787 MS.gene050941:CDS
GAAGAGTGAGGTGGGAAAAC+AGG 0.429247 7.1:+3687574 MS.gene050941:CDS
GAAGGAGCTTCTCCGATGTC+TGG 0.435810 7.1:+3688298 MS.gene050941:CDS
TCTGCTGTTGTTGATCGTGC+AGG 0.435897 7.1:-3687752 None:intergenic
GATAGAATGGCTTCTACAAC+TGG 0.435937 7.1:+3688403 MS.gene050941:CDS
GTGATTTGAGAAAGAGGGTT+AGG 0.441305 7.1:+3686346 MS.gene050941:CDS
TTGGTTCCCTATTAATTTCA+GGG 0.441433 7.1:-3688474 None:intergenic
GCTACGTTCAATTGATAGAA+TGG 0.442187 7.1:+3688390 MS.gene050941:CDS
AGAGGAATCTCAAGGAAGAA+AGG 0.442305 7.1:+3687529 MS.gene050941:CDS
GGACAAATGAGTATGATTAA+AGG 0.442629 7.1:+3689231 MS.gene050941:CDS
TTTAAAGATGCCAAAGCAAC+TGG 0.442699 7.1:-3688103 None:intergenic
GAACACATAACGGACTCATA+TGG 0.444472 7.1:-3687950 None:intergenic
ATACTTTCTCGTATATGAAC+AGG 0.444823 7.1:-3688187 None:intergenic
AGAAAGAGAAGACGAAAGAA+TGG 0.448531 7.1:+3687167 MS.gene050941:CDS
GTTTATAGAAGACGAGGATT+CGG 0.452935 7.1:+3686500 MS.gene050941:CDS
AGAAAGAGGGTTAGGTCAAA+GGG 0.453596 7.1:+3686354 MS.gene050941:CDS
GAATAGCCCTGAAATTAATA+GGG 0.454184 7.1:+3688468 MS.gene050941:CDS
GGCCATATAGCTGCATTCAC+AGG 0.458181 7.1:-3688667 None:intergenic
GTTCTTATATGTTGAGAACT+TGG 0.458529 7.1:-3688493 None:intergenic
ATCTCTCCATTTATGCAGAA+TGG 0.461478 7.1:+3688571 MS.gene050941:CDS
GCTTCTCCGATGTCTGGAGG+TGG 0.461950 7.1:+3688304 MS.gene050941:CDS
TTAAATCAGATTCTTGAGCT+TGG 0.463615 7.1:-3688129 None:intergenic
CCTGCACACACTTATTGTGT+TGG 0.464630 7.1:+3688031 MS.gene050941:CDS
TCTTCTTCTTTGACAGTAGC+GGG 0.465078 7.1:-3688778 None:intergenic
AATAGATCGAGGGCTAAAAC+TGG 0.465701 7.1:+3686555 MS.gene050941:CDS
TTCAGGTTATAGTACTTTCA+AGG 0.466528 7.1:+3689089 MS.gene050941:intron
TCAAATACCTGATCACGTTC+GGG 0.467441 7.1:-3687794 None:intergenic
GAGGACTTGAAGAGTGAGGT+GGG 0.468611 7.1:+3687566 MS.gene050941:CDS
TGGACAATCAGACACATTCC+CGG 0.469120 7.1:-3686424 None:intergenic
CACAGGCCCGTTCGAAAACA+TGG 0.469763 7.1:-3688650 None:intergenic
TGTTTGATCTGCTGCTGCAT+GGG 0.470031 7.1:-3688735 None:intergenic
ATGGTTGAATCCTGAACCAC+TGG 0.473286 7.1:-3688631 None:intergenic
ATGTTTGATCTGCTGCTGCA+TGG 0.473519 7.1:-3688736 None:intergenic
GCAAACGTGATTTGAGAAAG+AGG 0.473708 7.1:+3686340 MS.gene050941:CDS
CTTCTCCGATGTCTGGAGGT+GGG 0.475968 7.1:+3688305 MS.gene050941:CDS
GAGGTGAAGACATCAGGTTC+AGG 0.479499 7.1:-3688213 None:intergenic
GGAATCTCTGCTTACACAAA+GGG 0.482495 7.1:-3687715 None:intergenic
ATGTATGAGGTGAAGACATC+AGG 0.483949 7.1:-3688219 None:intergenic
ACAGATGGTAAAGGTAAGAA+AGG 0.486053 7.1:+3686311 None:intergenic
AGACATCGGAGAAGCTCCTT+CGG 0.486565 7.1:-3688296 None:intergenic
ATGTGGTTTCGGATGATGCC+GGG 0.487381 7.1:+3686406 MS.gene050941:CDS
GAGAAAGAGGGTTAGGTCAA+AGG 0.488109 7.1:+3686353 MS.gene050941:CDS
TGGTTGTAGACCAGTTGCTT+TGG 0.490683 7.1:+3688093 MS.gene050941:CDS
TTTGTAGCTGCTGAACTTGA+CGG 0.493087 7.1:-3688360 None:intergenic
TTCTCCGATGTCTGGAGGTG+GGG 0.496212 7.1:+3688306 MS.gene050941:CDS
GAAAGAGATCAGTCCTGAAA+AGG 0.496295 7.1:+3687267 MS.gene050941:CDS
CCATAAGAATGAGCAATTCA+AGG 0.500298 7.1:+3688605 MS.gene050941:CDS
GATTGGTCCATAATCTGATA+AGG 0.500628 7.1:-3688710 None:intergenic
TCACAGTACCAATTACCTTC+AGG 0.502598 7.1:-3688070 None:intergenic
AAAGGAGCGATTGCAGTCAA+TGG 0.505261 7.1:+3688816 MS.gene050941:CDS
AGAAGACGAGGATTCGGAAA+AGG 0.505843 7.1:+3686506 MS.gene050941:CDS
AGCCGGAATTGGCATCTTCA+AGG 0.506290 7.1:-3687301 None:intergenic
TTGATCTGCTGCTGCATGGG+TGG 0.507527 7.1:-3688732 None:intergenic
GTATATGAACAGGTGATGGC+CGG 0.507755 7.1:-3688177 None:intergenic
TTGCTCATTCTTATGGAGAA+GGG 0.514261 7.1:-3688598 None:intergenic
TATGTGGTTTCGGATGATGC+CGG 0.515722 7.1:+3686405 MS.gene050941:CDS
GTGAATGCAGCTATATGGCC+TGG 0.517468 7.1:+3688670 MS.gene050941:CDS
AGATAACTTGCACATTGTAA+AGG 0.517805 7.1:+3688798 MS.gene050941:CDS
GTGGTTACGATTAGGACTTT+AGG 0.519386 7.1:+3689329 MS.gene050941:CDS
GAGGAATCTCAAGGAAGAAA+GGG 0.523223 7.1:+3687530 MS.gene050941:CDS
GGAAAAGGAGGTGATTCAAC+GGG 0.526113 7.1:+3686521 MS.gene050941:CDS
ATCTCAAGGAAGAAAGGGTA+AGG 0.528597 7.1:+3687535 MS.gene050941:CDS
ATTGCTCATTCTTATGGAGA+AGG 0.529056 7.1:-3688599 None:intergenic
CACCGTCTCTCTGATAAAGT+TGG 0.530129 7.1:-3688331 None:intergenic
TCTTCGAATGGAAAATGAAG+TGG 0.531620 7.1:+3687442 MS.gene050941:CDS
TCAAACATTGTCACTGAGGT+TGG 0.532392 7.1:+3688751 MS.gene050941:CDS
AGAGGACTTGAAGAGTGAGG+TGG 0.533578 7.1:+3687565 MS.gene050941:CDS
GAGGAGAGCTTCTCTTCGAA+TGG 0.534382 7.1:+3687430 MS.gene050941:CDS
CACATTGAATTAATTGCTGG+TGG 0.534434 7.1:+3689210 MS.gene050941:CDS
TTTGGATGGATGTGCGGCTG+AGG 0.536263 7.1:+3686464 MS.gene050941:CDS
TAATTCAATGTGGGGACAGA+CGG 0.539650 7.1:-3689199 None:intergenic
ATGGAAGCCTCCAGCACGGA+AGG 0.541330 7.1:+3687493 MS.gene050941:CDS
GCCTCCAGCACGGAAGGGTA+AGG 0.541396 7.1:+3687499 MS.gene050941:CDS
ATCTTCTTCTTTGACAGTAG+CGG 0.541489 7.1:-3688779 None:intergenic
TCCTTACCCTTCCGTGCTGG+AGG 0.542762 7.1:-3687500 None:intergenic
CATAAGAATGAGCAATTCAA+GGG 0.546538 7.1:+3688606 MS.gene050941:CDS
GAAATATAAGAAGGAACTTG+AGG 0.547708 7.1:+3687411 MS.gene050941:CDS
CGAGGGCTAAAACTGGTGTA+AGG 0.548094 7.1:+3686562 MS.gene050941:CDS
TCTAGACTCGCAATCTGAGC+CGG 0.548400 7.1:-3687318 None:intergenic
CCAACACAATAAGTGTGTGC+AGG 0.549150 7.1:-3688031 None:intergenic
TCTACAACTGGCAGAACTAT+CGG 0.549352 7.1:+3688415 MS.gene050941:CDS
GATCAGTCCTGAAAAGGAGA+AGG 0.552181 7.1:+3687273 MS.gene050941:CDS
TGGGGACAGACGGATGGTGG+AGG 0.552215 7.1:-3689189 None:intergenic
ATGACACTCTGAACACATAA+CGG 0.553670 7.1:-3687960 None:intergenic
ATGTGTTCAGAGTGTCATCT+AGG 0.555373 7.1:+3687965 MS.gene050941:CDS
TGCTCATTCTTATGGAGAAG+GGG 0.556205 7.1:-3688597 None:intergenic
GAAGGGTAAGGAAAAGATAG+AGG 0.556670 7.1:+3687511 MS.gene050941:CDS
CAACACAATAAGTGTGTGCA+GGG 0.558064 7.1:-3688030 None:intergenic
TGATTCCGATGAGGATTATG+TGG 0.558363 7.1:+3686389 MS.gene050941:CDS
CATACCATACTCGCTGCTTG+TGG 0.558512 7.1:+3689132 MS.gene050941:CDS
AGTAGAGGACTTGAAGAGTG+AGG 0.559366 7.1:+3687562 MS.gene050941:CDS
ACACTTATTGTGTTGGTTTG+GGG 0.561817 7.1:+3688038 MS.gene050941:CDS
ATTCAAGTTACTTACTGTAC+CGG 0.563595 7.1:-3688449 None:intergenic
TACAAAAGAATCAAAACAAG+AGG 0.565655 7.1:-3689262 None:intergenic
ACCAGCAATTAATTCAATGT+GGG 0.568218 7.1:-3689208 None:intergenic
ATGTGGGGACAGACGGATGG+TGG 0.575769 7.1:-3689192 None:intergenic
CCTTGACTAAAAGATGTATG+AGG 0.577067 7.1:-3688232 None:intergenic
ATCAGTCCTGAAAAGGAGAA+GGG 0.579310 7.1:+3687274 MS.gene050941:CDS
CAAACGTGATTTGAGAAAGA+GGG 0.579793 7.1:+3686341 MS.gene050941:CDS
ATGAAGATCTACATCAGCAA+TGG 0.581305 7.1:+3687474 MS.gene050941:CDS
AGAACAGGTGAGAGAAGCCG+TGG 0.582933 7.1:+3687379 MS.gene050941:CDS
CGGAAAAGGAGGTGATTCAA+CGG 0.587891 7.1:+3686520 MS.gene050941:CDS
ACTATCGGTGTTTCAGCTAC+CGG 0.588312 7.1:+3688430 MS.gene050941:CDS
CACCAGCAATTAATTCAATG+TGG 0.590559 7.1:-3689209 None:intergenic
ACGATCAACAACAGCAGAAG+AGG 0.590744 7.1:+3687757 MS.gene050941:CDS
TATATGAACAGGTGATGGCC+GGG 0.592446 7.1:-3688176 None:intergenic
TGACTAAATTTAATAGATCG+AGG 0.593160 7.1:+3686544 MS.gene050941:CDS
TATATTTCCACACAACTCCA+CGG 0.596331 7.1:-3687396 None:intergenic
AGTTGTGTGGAAATATAAGA+AGG 0.598804 7.1:+3687402 MS.gene050941:CDS
ATAGTAAACTCATAATCAGA+TGG 0.599794 7.1:-3687341 None:intergenic
GGAGCTTCTCCGATGTCTGG+AGG 0.601337 7.1:+3688301 MS.gene050941:CDS
GTACTTTCAAGGACATTGCA+AGG 0.602317 7.1:+3689100 MS.gene050941:CDS
TGAACAGGTGATGGCCGGGA+AGG 0.603021 7.1:-3688172 None:intergenic
AGGGTTAGGTCAAAGGGCAG+TGG 0.607527 7.1:+3686360 MS.gene050941:CDS
TGGAATCTCTGCTTACACAA+AGG 0.608667 7.1:-3687716 None:intergenic
TCTCGTATATGAACAGGTGA+TGG 0.613237 7.1:-3688181 None:intergenic
CGAATGGAAAATGAAGTGGT+TGG 0.613778 7.1:+3687446 MS.gene050941:CDS
GAAAAGATAGAGGAATCTCA+AGG 0.614767 7.1:+3687521 MS.gene050941:CDS
GGTGCCCCACCTCCAGACAT+CGG 0.618253 7.1:-3688310 None:intergenic
CGAAACCACATAATCCTCAT+CGG 0.618800 7.1:-3686394 None:intergenic
TGATGGGTTTATAGAAGACG+AGG 0.620222 7.1:+3686494 MS.gene050941:CDS
GACTAAATTTAATAGATCGA+GGG 0.620528 7.1:+3686545 MS.gene050941:CDS
AGCCAACTGAAGAAGAACTC+AGG 0.620739 7.1:+3687915 MS.gene050941:CDS
GTTTCTGCAACTTCTAGCAG+AGG 0.621858 7.1:+3687104 MS.gene050941:CDS
TCAATGTGGGGACAGACGGA+TGG 0.622245 7.1:-3689195 None:intergenic
CACCAACTTTATCAGAGAGA+CGG 0.623622 7.1:+3688329 MS.gene050941:CDS
AAACTGGTGTAAGGCGTCAG+CGG 0.637909 7.1:+3686571 MS.gene050941:CDS
GAGCAATTCAAGGGGCCCAG+TGG 0.643280 7.1:+3688615 MS.gene050941:CDS
AGACGAGGATTCGGAAAAGG+AGG 0.643886 7.1:+3686509 MS.gene050941:CDS
TTCTCAACATATAAGAACAC+AGG 0.644148 7.1:+3688498 MS.gene050941:CDS
AGAGAAGCCGTGGAGTTGTG+TGG 0.645101 7.1:+3687389 MS.gene050941:CDS
ATCAACAACAGCAGAAGAGG+CGG 0.646830 7.1:+3687760 MS.gene050941:CDS
AGCAATGGAAGCCTCCAGCA+CGG 0.653022 7.1:+3687489 MS.gene050941:CDS
CATATAAGAACACAGGACGT+AGG 0.654634 7.1:+3688505 MS.gene050941:CDS
AAGAGAAGACGAAAGAATGG+AGG 0.656131 7.1:+3687170 MS.gene050941:CDS
TGGAAGCCTCCAGCACGGAA+GGG 0.661115 7.1:+3687494 MS.gene050941:CDS
TGTCATCTAGGTGGAGACGA+TGG 0.665066 7.1:+3687977 MS.gene050941:CDS
TGTTCAGAGTGTCATCTAGG+TGG 0.667853 7.1:+3687968 MS.gene050941:CDS
CCAGCAATTAATTCAATGTG+GGG 0.670551 7.1:-3689207 None:intergenic
CAACTTTATCAGAGAGACGG+TGG 0.672641 7.1:+3688332 MS.gene050941:CDS
GAAGGTAATTGGTACTGTGA+TGG 0.672974 7.1:+3688073 MS.gene050941:CDS
TTGGGGAGAGAAGTACCTGA+AGG 0.674115 7.1:+3688055 MS.gene050941:CDS
TGTGTGAGAACAGATGGTAA+AGG 0.674564 7.1:+3686302 None:intergenic
TGGTTCTGATGATTCCGATG+AGG 0.681336 7.1:+3686380 MS.gene050941:CDS
TGGTTGAATCCTGAACCACT+GGG 0.690869 7.1:-3688630 None:intergenic
TCAAGAATCTGATTTAAGAG+CGG 0.691879 7.1:+3688135 MS.gene050941:CDS
CAGATCAAACATTGTCACTG+AGG 0.704891 7.1:+3688747 MS.gene050941:CDS
ATAAGAATGAGCAATTCAAG+GGG 0.716344 7.1:+3688607 MS.gene050941:CDS
ATATATCACAGAGTAGCATG+AGG 0.719343 7.1:-3688000 None:intergenic
GAATGTGTCTGATTGTCCAG+AGG 0.723141 7.1:+3686428 MS.gene050941:CDS
AACACAATAAGTGTGTGCAG+GGG 0.725731 7.1:-3688029 None:intergenic
ACTCGAGCACAATACGAGTG+AGG 0.731655 7.1:+3689155 MS.gene050941:CDS
GAAAGAATGGAGGATCAACG+AGG 0.744731 7.1:+3687180 MS.gene050941:CDS
ACACAAGAATGTCTTCACAG+TGG 0.768688 7.1:+3689310 MS.gene050941:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTCTATCATTTATATATCA+TGG + chr7.1:3688888-3688907 MS.gene050941:intron 20.0%
!!! AATATTTTGATTTTACATGC+AGG + chr7.1:3687886-3687905 MS.gene050941:intron 20.0%
! AAATTCTTCGTCTTCATAAA+TGG - chr7.1:3686976-3686995 None:intergenic 25.0%
! AGGAAAATAAAAGAAGAGTA+AGG + chr7.1:3687618-3687637 MS.gene050941:intron 25.0%
! ATAGTAAACTCATAATCAGA+TGG - chr7.1:3687344-3687363 None:intergenic 25.0%
! ATGATACTAGAAATCTGTAA+TGG + chr7.1:3688975-3688994 MS.gene050941:intron 25.0%
! CGCATTAAGAAGAAAAATAA+TGG + chr7.1:3687044-3687063 MS.gene050941:intron 25.0%
! GAAAATAAAAGAAGAGTAAG+GGG + chr7.1:3687620-3687639 MS.gene050941:intron 25.0%
! GACTAAATTTAATAGATCGA+GGG + chr7.1:3686545-3686564 MS.gene050941:CDS 25.0%
! GGAAAATAAAAGAAGAGTAA+GGG + chr7.1:3687619-3687638 MS.gene050941:intron 25.0%
! TACAAAAGAATCAAAACAAG+AGG - chr7.1:3689265-3689284 None:intergenic 25.0%
! TCATCATTCATTACATCATA+AGG + chr7.1:3688915-3688934 MS.gene050941:intron 25.0%
! TGACTAAATTTAATAGATCG+AGG + chr7.1:3686544-3686563 MS.gene050941:CDS 25.0%
!!! AAATTTTGACCATTTGCTTA+TGG + chr7.1:3687832-3687851 MS.gene050941:intron 25.0%
!!! AGATGTGGTTAAAAGTATTT+TGG + chr7.1:3689287-3689306 MS.gene050941:CDS 25.0%
!!! TCTTGTTTTGATTCTTTTGT+AGG + chr7.1:3689264-3689283 MS.gene050941:CDS 25.0%
!!! TGTCTTTTATGTATTGATTC+AGG + chr7.1:3689072-3689091 MS.gene050941:intron 25.0%
!!! TTACAGATTTCTAGTATCAT+AGG - chr7.1:3688975-3688994 None:intergenic 25.0%
AAAAATAATGGCACGAAGAT+GGG + chr7.1:3687056-3687075 MS.gene050941:intron 30.0%
AAAGAAAAACAATCATCCTC+TGG - chr7.1:3686447-3686466 None:intergenic 30.0%
ACATCAACCTTATCAGATTA+TGG + chr7.1:3688703-3688722 MS.gene050941:CDS 30.0%
ACCAGCAATTAATTCAATGT+GGG - chr7.1:3689211-3689230 None:intergenic 30.0%
AGTTGTGTGGAAATATAAGA+AGG + chr7.1:3687402-3687421 MS.gene050941:CDS 30.0%
ATAAGAATGAGCAATTCAAG+GGG + chr7.1:3688607-3688626 MS.gene050941:CDS 30.0%
ATACTTTCTCGTATATGAAC+AGG - chr7.1:3688190-3688209 None:intergenic 30.0%
ATTGCAAAACCATAAGCAAA+TGG - chr7.1:3687844-3687863 None:intergenic 30.0%
CATAAGAATGAGCAATTCAA+GGG + chr7.1:3688606-3688625 MS.gene050941:CDS 30.0%
CCATTACTAGAAATCTGTAA+TGG + chr7.1:3688944-3688963 MS.gene050941:intron 30.0%
GAAATATAAGAAGGAACTTG+AGG + chr7.1:3687411-3687430 MS.gene050941:CDS 30.0%
GAAGAACAAGATGAAGAAAA+AGG + chr7.1:3686669-3686688 MS.gene050941:intron 30.0%
GAATAGCCCTGAAATTAATA+GGG + chr7.1:3688468-3688487 MS.gene050941:CDS 30.0%
GGACAAATGAGTATGATTAA+AGG + chr7.1:3689231-3689250 MS.gene050941:CDS 30.0%
GTTCTTATATGTTGAGAACT+TGG - chr7.1:3688496-3688515 None:intergenic 30.0%
TAAATCAGATTCTTGAGCTT+GGG - chr7.1:3688131-3688150 None:intergenic 30.0%
TCAAGAATCTGATTTAAGAG+CGG + chr7.1:3688135-3688154 MS.gene050941:CDS 30.0%
TGAAGACGAAGAATTTAAAC+CGG + chr7.1:3686980-3686999 MS.gene050941:intron 30.0%
TGAATAGCCCTGAAATTAAT+AGG + chr7.1:3688467-3688486 MS.gene050941:CDS 30.0%
TTAAATCAGATTCTTGAGCT+TGG - chr7.1:3688132-3688151 None:intergenic 30.0%
TTCTCAACATATAAGAACAC+AGG + chr7.1:3688498-3688517 MS.gene050941:CDS 30.0%
TTGGTTCCCTATTAATTTCA+GGG - chr7.1:3688477-3688496 None:intergenic 30.0%
! AGATAACTTGCACATTGTAA+AGG + chr7.1:3688798-3688817 MS.gene050941:CDS 30.0%
! ATTCAAGTTACTTACTGTAC+CGG - chr7.1:3688452-3688471 None:intergenic 30.0%
! CTCATACATCTTTTAGTCAA+GGG + chr7.1:3688233-3688252 MS.gene050941:CDS 30.0%
! CTTTCATCTTCTAGATTTTC+TGG + chr7.1:3688265-3688284 MS.gene050941:CDS 30.0%
! TCAACGAAGATTCTTTTCAT+AGG - chr7.1:3689006-3689025 None:intergenic 30.0%
! TTACAATGATGTTGATGAAG+AGG + chr7.1:3686746-3686765 MS.gene050941:intron 30.0%
! TTCAGGTTATAGTACTTTCA+AGG + chr7.1:3689089-3689108 MS.gene050941:intron 30.0%
! TTTTTGCTTTGCTTGCATTA+TGG + chr7.1:3687667-3687686 MS.gene050941:intron 30.0%
!! AGAGGATGATTGTTTTTCTT+TGG + chr7.1:3686446-3686465 MS.gene050941:CDS 30.0%
!! CCATTACAGATTTCTAGTAA+TGG - chr7.1:3688947-3688966 None:intergenic 30.0%
!! GATGATTGTTTTTCTTTGGA+TGG + chr7.1:3686450-3686469 MS.gene050941:CDS 30.0%
!!! ACATTTTTTGAGGAGAGATT+AGG + chr7.1:3688541-3688560 MS.gene050941:CDS 30.0%
!!! ATCCTATCACACATTTTTTG+AGG + chr7.1:3688531-3688550 MS.gene050941:CDS 30.0%
!!! TGATGATGCAGATGATTTTT+TGG + chr7.1:3687214-3687233 MS.gene050941:CDS 30.0%
AAAGGGTAAGGAAAAAGTAG+AGG + chr7.1:3687547-3687566 MS.gene050941:CDS 35.0%
AGAAAAAGAAGAAGTGGAAG+TGG + chr7.1:3686836-3686855 MS.gene050941:intron 35.0%
AGAAAGAGAAGACGAAAGAA+TGG + chr7.1:3687167-3687186 MS.gene050941:CDS 35.0%
AGAGGAAGAAAAAGAAGAAG+TGG + chr7.1:3686830-3686849 MS.gene050941:intron 35.0%
ATATATCACAGAGTAGCATG+AGG - chr7.1:3688003-3688022 None:intergenic 35.0%
ATCTCTCCATTTATGCAGAA+TGG + chr7.1:3688571-3688590 MS.gene050941:CDS 35.0%
ATCTTCTTCTTTGACAGTAG+CGG - chr7.1:3688782-3688801 None:intergenic 35.0%
ATGAAGATCTACATCAGCAA+TGG + chr7.1:3687474-3687493 MS.gene050941:CDS 35.0%
ATGACACTCTGAACACATAA+CGG - chr7.1:3687963-3687982 None:intergenic 35.0%
ATTGCTCATTCTTATGGAGA+AGG - chr7.1:3688602-3688621 None:intergenic 35.0%
ATTGTCTCAAGAAGCTGATT+TGG + chr7.1:3688858-3688877 MS.gene050941:CDS 35.0%
CAAACGTGATTTGAGAAAGA+GGG + chr7.1:3686341-3686360 MS.gene050941:CDS 35.0%
CACATTGAATTAATTGCTGG+TGG + chr7.1:3689210-3689229 MS.gene050941:CDS 35.0%
CACCAGCAATTAATTCAATG+TGG - chr7.1:3689212-3689231 None:intergenic 35.0%
CCAGCAATTAATTCAATGTG+GGG - chr7.1:3689210-3689229 None:intergenic 35.0%
CCATAAGAATGAGCAATTCA+AGG + chr7.1:3688605-3688624 MS.gene050941:CDS 35.0%
CCTTGAATTGCTCATTCTTA+TGG - chr7.1:3688608-3688627 None:intergenic 35.0%
CCTTGACTAAAAGATGTATG+AGG - chr7.1:3688235-3688254 None:intergenic 35.0%
CTCCTCAAAAAATGTGTGAT+AGG - chr7.1:3688536-3688555 None:intergenic 35.0%
CTTGGTTCCCTATTAATTTC+AGG - chr7.1:3688478-3688497 None:intergenic 35.0%
GAAAAATAATGGCACGAAGA+TGG + chr7.1:3687055-3687074 MS.gene050941:intron 35.0%
GAAAAGATAGAGGAATCTCA+AGG + chr7.1:3687521-3687540 MS.gene050941:CDS 35.0%
GCTACGTTCAATTGATAGAA+TGG + chr7.1:3688390-3688409 MS.gene050941:CDS 35.0%
GGATGATGAATTTAAACCAG+AGG + chr7.1:3686887-3686906 MS.gene050941:intron 35.0%
GTTTATAGAAGACGAGGATT+CGG + chr7.1:3686500-3686519 MS.gene050941:CDS 35.0%
TATATTTCCACACAACTCCA+CGG - chr7.1:3687399-3687418 None:intergenic 35.0%
TCTTCGAATGGAAAATGAAG+TGG + chr7.1:3687442-3687461 MS.gene050941:CDS 35.0%
TCTTCTTCTTCTTCTTCTTC+TGG - chr7.1:3686651-3686670 None:intergenic 35.0%
TTCAAATACCTGATCACGTT+CGG - chr7.1:3687798-3687817 None:intergenic 35.0%
TTGCTCATTCTTATGGAGAA+GGG - chr7.1:3688601-3688620 None:intergenic 35.0%
TTTAAAGATGCCAAAGCAAC+TGG - chr7.1:3688106-3688125 None:intergenic 35.0%
TTTCGTCTTCTCTTTCTCTT+GGG - chr7.1:3687164-3687183 None:intergenic 35.0%
! ACATCTTTTAGTCAAGGGTT+CGG + chr7.1:3688238-3688257 MS.gene050941:CDS 35.0%
! ATTCAACCATGTTTTCGAAC+GGG + chr7.1:3688644-3688663 MS.gene050941:CDS 35.0%
! CCTCATACATCTTTTAGTCA+AGG + chr7.1:3688232-3688251 MS.gene050941:CDS 35.0%
! CTCTGAAGAAGAAAAAGAAC+AGG + chr7.1:3687364-3687383 MS.gene050941:CDS 35.0%
! CTTTCTGCTATTTGTTCTGA+TGG - chr7.1:3687252-3687271 None:intergenic 35.0%
! GATTCAACCATGTTTTCGAA+CGG + chr7.1:3688643-3688662 MS.gene050941:CDS 35.0%
! GATTGGTCCATAATCTGATA+AGG - chr7.1:3688713-3688732 None:intergenic 35.0%
! TGATTCTTTTGTAGGAGATG+TGG + chr7.1:3689272-3689291 MS.gene050941:CDS 35.0%
! TTGTCTCAAGAAGCTGATTT+GGG + chr7.1:3688859-3688878 MS.gene050941:CDS 35.0%
! TTTTTCTTTGGATGGATGTG+CGG + chr7.1:3686458-3686477 MS.gene050941:CDS 35.0%
!! ACACACTTATTGTGTTGGTT+TGG + chr7.1:3688036-3688055 MS.gene050941:CDS 35.0%
!! ACACTTATTGTGTTGGTTTG+GGG + chr7.1:3688038-3688057 MS.gene050941:CDS 35.0%
!! AGAAGAAGGCTTTGAAGAAA+AGG + chr7.1:3687081-3687100 MS.gene050941:intron 35.0%
!! CACACTTATTGTGTTGGTTT+GGG + chr7.1:3688037-3688056 MS.gene050941:CDS 35.0%
!! GAAGAAGGCTTTGAAGAAAA+GGG + chr7.1:3687082-3687101 MS.gene050941:intron 35.0%
AACACAATAAGTGTGTGCAG+GGG - chr7.1:3688032-3688051 None:intergenic 40.0%
AAGAGAAGACGAAAGAATGG+AGG + chr7.1:3687170-3687189 MS.gene050941:CDS 40.0%
AAGGGGCAGAAAGAAGAAAA+AGG + chr7.1:3686944-3686963 MS.gene050941:intron 40.0%
AATAGATCGAGGGCTAAAAC+TGG + chr7.1:3686555-3686574 MS.gene050941:CDS 40.0%
ACACAAGAATGTCTTCACAG+TGG + chr7.1:3689310-3689329 MS.gene050941:CDS 40.0%
AGAAAGAGGGTTAGGTCAAA+GGG + chr7.1:3686354-3686373 MS.gene050941:CDS 40.0%
AGAAGAAGTGGAAGTGGAAA+TGG + chr7.1:3686794-3686813 MS.gene050941:intron 40.0%
AGAAGATTTCACAGATGAGG+AGG + chr7.1:3686911-3686930 MS.gene050941:intron 40.0%
AGACGAAGAATTTAAACCGG+AGG + chr7.1:3686983-3687002 MS.gene050941:intron 40.0%
AGAGGAAGAAGTAGAAGAAG+AGG + chr7.1:3686698-3686717 MS.gene050941:intron 40.0%
AGAGGAATCTCAAGGAAGAA+AGG + chr7.1:3687529-3687548 MS.gene050941:CDS 40.0%
AGAGGTAGGTGAAAATGATG+AGG + chr7.1:3686866-3686885 MS.gene050941:intron 40.0%
ATCAGTCCTGAAAAGGAGAA+GGG + chr7.1:3687274-3687293 MS.gene050941:CDS 40.0%
ATCCTTGAAGATGCCAATTC+CGG + chr7.1:3687299-3687318 MS.gene050941:CDS 40.0%
ATCTCAAGGAAGAAAGGGTA+AGG + chr7.1:3687535-3687554 MS.gene050941:CDS 40.0%
ATGAGGAGGAAGAAGAAACA+AGG + chr7.1:3686925-3686944 MS.gene050941:intron 40.0%
ATGTATGAGGTGAAGACATC+AGG - chr7.1:3688222-3688241 None:intergenic 40.0%
CAACACAATAAGTGTGTGCA+GGG - chr7.1:3688033-3688052 None:intergenic 40.0%
CACCAACTTTATCAGAGAGA+CGG + chr7.1:3688329-3688348 MS.gene050941:CDS 40.0%
CAGATCAAACATTGTCACTG+AGG + chr7.1:3688747-3688766 MS.gene050941:CDS 40.0%
CATATAAGAACACAGGACGT+AGG + chr7.1:3688505-3688524 MS.gene050941:CDS 40.0%
CCCCACATTGAATTAATTGC+TGG + chr7.1:3689207-3689226 MS.gene050941:CDS 40.0%
CGAAACCACATAATCCTCAT+CGG - chr7.1:3686397-3686416 None:intergenic 40.0%
CGAATGGAAAATGAAGTGGT+TGG + chr7.1:3687446-3687465 MS.gene050941:CDS 40.0%
CGATGAGGATTATGTGGTTT+CGG + chr7.1:3686395-3686414 MS.gene050941:CDS 40.0%
CTAATGTAAGTAAAGCCTCG+AGG + chr7.1:3686595-3686614 MS.gene050941:intron 40.0%
CTTTCGTCTTCTCTTTCTCT+TGG - chr7.1:3687165-3687184 None:intergenic 40.0%
GAAAGAGATCAGTCCTGAAA+AGG + chr7.1:3687267-3687286 MS.gene050941:CDS 40.0%
GAAGGGTAAGGAAAAGATAG+AGG + chr7.1:3687511-3687530 MS.gene050941:CDS 40.0%
GAAGGTAATTGGTACTGTGA+TGG + chr7.1:3688073-3688092 MS.gene050941:CDS 40.0%
GAGGAATCTCAAGGAAGAAA+GGG + chr7.1:3687530-3687549 MS.gene050941:CDS 40.0%
GATAGAATGGCTTCTACAAC+TGG + chr7.1:3688403-3688422 MS.gene050941:CDS 40.0%
GCAAACGTGATTTGAGAAAG+AGG + chr7.1:3686340-3686359 MS.gene050941:CDS 40.0%
GGAAGAAGATTTCACAGATG+AGG + chr7.1:3686908-3686927 MS.gene050941:intron 40.0%
GGAATCTCTGCTTACACAAA+GGG - chr7.1:3687718-3687737 None:intergenic 40.0%
GTACTTTCAAGGACATTGCA+AGG + chr7.1:3689100-3689119 MS.gene050941:CDS 40.0%
GTGATTTGAGAAAGAGGGTT+AGG + chr7.1:3686346-3686365 MS.gene050941:CDS 40.0%
TAATTCAATGTGGGGACAGA+CGG - chr7.1:3689202-3689221 None:intergenic 40.0%
TCAAACATTGTCACTGAGGT+TGG + chr7.1:3688751-3688770 MS.gene050941:CDS 40.0%
TCAAATACCTGATCACGTTC+GGG - chr7.1:3687797-3687816 None:intergenic 40.0%
TCACAGTACCAATTACCTTC+AGG - chr7.1:3688073-3688092 None:intergenic 40.0%
TCTACAACTGGCAGAACTAT+CGG + chr7.1:3688415-3688434 MS.gene050941:CDS 40.0%
TCTCGTATATGAACAGGTGA+TGG - chr7.1:3688184-3688203 None:intergenic 40.0%
TCTGTGAAATCTTCTTCCTC+TGG - chr7.1:3686906-3686925 None:intergenic 40.0%
TCTTCACAGTGGTTACGATT+AGG + chr7.1:3689321-3689340 MS.gene050941:CDS 40.0%
TCTTCTTCTTTGACAGTAGC+GGG - chr7.1:3688781-3688800 None:intergenic 40.0%
TGAAGAAAAAGGAGACGAAG+AGG + chr7.1:3686680-3686699 MS.gene050941:intron 40.0%
TGAGGAGGAAGAAGAAACAA+GGG + chr7.1:3686926-3686945 MS.gene050941:intron 40.0%
TGATTCCGATGAGGATTATG+TGG + chr7.1:3686389-3686408 MS.gene050941:CDS 40.0%
TGCTCATTCTTATGGAGAAG+GGG - chr7.1:3688600-3688619 None:intergenic 40.0%
TGGAATCTCTGCTTACACAA+AGG - chr7.1:3687719-3687738 None:intergenic 40.0%
TTGCATTATGGAGTGGTCAA+AGG + chr7.1:3687679-3687698 MS.gene050941:intron 40.0%
TTTGTAGCTGCTGAACTTGA+CGG - chr7.1:3688363-3688382 None:intergenic 40.0%
! AGCTATATGGCCTGGAATTT+TGG + chr7.1:3688678-3688697 MS.gene050941:CDS 40.0%
! ATGTGTTCAGAGTGTCATCT+AGG + chr7.1:3687965-3687984 MS.gene050941:CDS 40.0%
! CAATGATGTTGATGAAGAGG+AGG + chr7.1:3686749-3686768 MS.gene050941:intron 40.0%
! CATCTTTTAGTCAAGGGTTC+GGG + chr7.1:3688239-3688258 MS.gene050941:CDS 40.0%
! CTATATGGCCTGGAATTTTG+GGG + chr7.1:3688680-3688699 MS.gene050941:CDS 40.0%
! GCTATATGGCCTGGAATTTT+GGG + chr7.1:3688679-3688698 MS.gene050941:CDS 40.0%
! TGCTATTTGTTCTGATGGCT+GGG - chr7.1:3687247-3687266 None:intergenic 40.0%
!! GAACACATAACGGACTCATA+TGG - chr7.1:3687953-3687972 None:intergenic 40.0%
!! GAGAAGTACCTGAAGGTAAT+TGG + chr7.1:3688062-3688081 MS.gene050941:CDS 40.0%
!! TGATGGGTTTATAGAAGACG+AGG + chr7.1:3686494-3686513 MS.gene050941:CDS 40.0%
AAAGGAGCGATTGCAGTCAA+TGG + chr7.1:3688816-3688835 MS.gene050941:CDS 45.0%
AATGGAAGAGGAAGAGGAAG+AGG + chr7.1:3686812-3686831 MS.gene050941:intron 45.0%
ACGATCAACAACAGCAGAAG+AGG + chr7.1:3687757-3687776 MS.gene050941:CDS 45.0%
AGAAGAAGTGGAAGTGGAAG+TGG + chr7.1:3686842-3686861 MS.gene050941:intron 45.0%
AGAAGACGAGGATTCGGAAA+AGG + chr7.1:3686506-3686525 MS.gene050941:CDS 45.0%
AGAAGTAGAAGAAGAGGAGG+AGG + chr7.1:3686704-3686723 MS.gene050941:intron 45.0%
AGAGGAAGAAGAAGTGGAAG+TGG + chr7.1:3686788-3686807 MS.gene050941:intron 45.0%
AGAGGAAGAGGAAGAAGAAG+TGG + chr7.1:3686782-3686801 MS.gene050941:intron 45.0%
AGCCAACTGAAGAAGAACTC+AGG + chr7.1:3687915-3687934 MS.gene050941:CDS 45.0%
AGTAGAGGACTTGAAGAGTG+AGG + chr7.1:3687562-3687581 MS.gene050941:CDS 45.0%
AGTGGAAATGGAAGAGGAAG+AGG + chr7.1:3686806-3686825 MS.gene050941:intron 45.0%
AGTGGAAGTGGAAATGGAAG+AGG + chr7.1:3686800-3686819 MS.gene050941:intron 45.0%
ATCAACAACAGCAGAAGAGG+CGG + chr7.1:3687760-3687779 MS.gene050941:CDS 45.0%
ATGGTTGAATCCTGAACCAC+TGG - chr7.1:3688634-3688653 None:intergenic 45.0%
ATGTTTGATCTGCTGCTGCA+TGG - chr7.1:3688739-3688758 None:intergenic 45.0%
CAACTTTATCAGAGAGACGG+TGG + chr7.1:3688332-3688351 MS.gene050941:CDS 45.0%
CACCGTCTCTCTGATAAAGT+TGG - chr7.1:3688334-3688353 None:intergenic 45.0%
CCAACACAATAAGTGTGTGC+AGG - chr7.1:3688034-3688053 None:intergenic 45.0%
CCTGCACACACTTATTGTGT+TGG + chr7.1:3688031-3688050 MS.gene050941:CDS 45.0%
CGAAGATTACACAGATGAGG+AGG + chr7.1:3687007-3687026 MS.gene050941:intron 45.0%
CGGAAAAGGAGGTGATTCAA+CGG + chr7.1:3686520-3686539 MS.gene050941:CDS 45.0%
CTCCTGAGTTCTTCTTCAGT+TGG - chr7.1:3687920-3687939 None:intergenic 45.0%
CTTCTAGCAGAGGTCGAAAA+AGG + chr7.1:3687114-3687133 MS.gene050941:CDS 45.0%
GAAAGAATGGAGGATCAACG+AGG + chr7.1:3687180-3687199 MS.gene050941:CDS 45.0%
GAATGTGTCTGATTGTCCAG+AGG + chr7.1:3686428-3686447 MS.gene050941:CDS 45.0%
GAGAAAGAGGGTTAGGTCAA+AGG + chr7.1:3686353-3686372 MS.gene050941:CDS 45.0%
GAGGAGGAAGAAGAAACAAG+GGG + chr7.1:3686927-3686946 MS.gene050941:intron 45.0%
GATCAGTCCTGAAAAGGAGA+AGG + chr7.1:3687273-3687292 MS.gene050941:CDS 45.0%
GCTTTGCTTGCATTATGGAG+TGG + chr7.1:3687672-3687691 MS.gene050941:intron 45.0%
GGAAAAGGAGGTGATTCAAC+GGG + chr7.1:3686521-3686540 MS.gene050941:CDS 45.0%
GGAAGAAGTAGAAGAAGAGG+AGG + chr7.1:3686701-3686720 MS.gene050941:intron 45.0%
GGACGAAGATTACACAGATG+AGG + chr7.1:3687004-3687023 MS.gene050941:intron 45.0%
GGGTCTCCATTCTGCATAAA+TGG - chr7.1:3688580-3688599 None:intergenic 45.0%
GTGTGGAATTTGTCTGTCTG+AGG + chr7.1:3687598-3687617 MS.gene050941:intron 45.0%
GTTGATGTCCCCAAAATTCC+AGG - chr7.1:3688691-3688710 None:intergenic 45.0%
GTTTCTGCAACTTCTAGCAG+AGG + chr7.1:3687104-3687123 MS.gene050941:CDS 45.0%
TATGTGGTTTCGGATGATGC+CGG + chr7.1:3686405-3686424 MS.gene050941:CDS 45.0%
TCTGTGTAATCTTCGTCCTC+CGG - chr7.1:3687002-3687021 None:intergenic 45.0%
TGGACAATCAGACACATTCC+CGG - chr7.1:3686427-3686446 None:intergenic 45.0%
TGGTTGAATCCTGAACCACT+GGG - chr7.1:3688633-3688652 None:intergenic 45.0%
TGGTTGTAGACCAGTTGCTT+TGG + chr7.1:3688093-3688112 MS.gene050941:CDS 45.0%
TGTTTGATCTGCTGCTGCAT+GGG - chr7.1:3688738-3688757 None:intergenic 45.0%
! ACTATCGGTGTTTCAGCTAC+CGG + chr7.1:3688430-3688449 MS.gene050941:CDS 45.0%
! CTGCTATTTGTTCTGATGGC+TGG - chr7.1:3687248-3687267 None:intergenic 45.0%
! GGATAACCCTTCTCCTTTTC+AGG - chr7.1:3687283-3687302 None:intergenic 45.0%
! GTATATGAACAGGTGATGGC+CGG - chr7.1:3688180-3688199 None:intergenic 45.0%
! GTGCAGGCTTACTGATTGTT+TGG - chr7.1:3687739-3687758 None:intergenic 45.0%
! TATATGAACAGGTGATGGCC+GGG - chr7.1:3688179-3688198 None:intergenic 45.0%
! TGTTCAGAGTGTCATCTAGG+TGG + chr7.1:3687968-3687987 MS.gene050941:CDS 45.0%
! TGTTGATGAAGAGGAGGATG+AGG + chr7.1:3686755-3686774 MS.gene050941:intron 45.0%
!! TGGTTCTGATGATTCCGATG+AGG + chr7.1:3686380-3686399 MS.gene050941:CDS 45.0%
!!! CGGCTGAGGATAGTTTTGAT+GGG + chr7.1:3686478-3686497 MS.gene050941:CDS 45.0%
!!! TTTTCTGGCAGAAGTACCGA+AGG + chr7.1:3688280-3688299 MS.gene050941:CDS 45.0%
ACTCGAGCACAATACGAGTG+AGG + chr7.1:3689155-3689174 MS.gene050941:CDS 50.0%
AGACATCGGAGAAGCTCCTT+CGG - chr7.1:3688299-3688318 None:intergenic 50.0%
AGACGAGGATTCGGAAAAGG+AGG + chr7.1:3686509-3686528 MS.gene050941:CDS 50.0%
AGAGGACTTGAAGAGTGAGG+TGG + chr7.1:3687565-3687584 MS.gene050941:CDS 50.0%
AGCAGAGGTCGAAAAAGGAG+TGG + chr7.1:3687119-3687138 MS.gene050941:CDS 50.0%
AGCCGGAATTGGCATCTTCA+AGG - chr7.1:3687304-3687323 None:intergenic 50.0%
AGTGGAAGTGGAAGTGGAAG+AGG + chr7.1:3686848-3686867 MS.gene050941:intron 50.0%
ATGTGGTTTCGGATGATGCC+GGG + chr7.1:3686406-3686425 MS.gene050941:CDS 50.0%
CACGAAGATGGGCAAGAAGA+AGG + chr7.1:3687067-3687086 MS.gene050941:intron 50.0%
CATACCATACTCGCTGCTTG+TGG + chr7.1:3689132-3689151 MS.gene050941:CDS 50.0%
CGAGGGCTAAAACTGGTGTA+AGG + chr7.1:3686562-3686581 MS.gene050941:CDS 50.0%
GAAGAGTGAGGTGGGAAAAC+AGG + chr7.1:3687574-3687593 MS.gene050941:CDS 50.0%
GAAGTGGAAGTGGAAGAGGT+AGG + chr7.1:3686852-3686871 MS.gene050941:intron 50.0%
GAGGACTTGAAGAGTGAGGT+GGG + chr7.1:3687566-3687585 MS.gene050941:CDS 50.0%
GAGGAGAGCTTCTCTTCGAA+TGG + chr7.1:3687430-3687449 MS.gene050941:CDS 50.0%
GAGGTGAAGACATCAGGTTC+AGG - chr7.1:3688216-3688235 None:intergenic 50.0%
GGCCATATAGCTGCATTCAC+AGG - chr7.1:3688670-3688689 None:intergenic 50.0%
GGCCTGTGAATGCAGCTATA+TGG + chr7.1:3688665-3688684 MS.gene050941:CDS 50.0%
GTGAATGCAGCTATATGGCC+TGG + chr7.1:3688670-3688689 MS.gene050941:CDS 50.0%
TCTAGACTCGCAATCTGAGC+CGG - chr7.1:3687321-3687340 None:intergenic 50.0%
TCTGCTGTTGTTGATCGTGC+AGG - chr7.1:3687755-3687774 None:intergenic 50.0%
TGATGAAGAGGAGGATGAGG+AGG + chr7.1:3686758-3686777 MS.gene050941:intron 50.0%
TGTCATCTAGGTGGAGACGA+TGG + chr7.1:3687977-3687996 MS.gene050941:CDS 50.0%
! AAACTGGTGTAAGGCGTCAG+CGG + chr7.1:3686571-3686590 MS.gene050941:CDS 50.0%
! TTTTCCTTACCCTTCCGTGC+TGG - chr7.1:3687506-3687525 None:intergenic 50.0%
!! TTGGGGAGAGAAGTACCTGA+AGG + chr7.1:3688055-3688074 MS.gene050941:CDS 50.0%
!!! GCGGCTGAGGATAGTTTTGA+TGG + chr7.1:3686477-3686496 MS.gene050941:CDS 50.0%
AACCCTCTGTCTCTTCCTCG+AGG - chr7.1:3686613-3686632 None:intergenic 55.0%
AAGCCTCGAGGAAGAGACAG+AGG + chr7.1:3686607-3686626 MS.gene050941:intron 55.0%
ACAAGTGCCCGAACGTGATC+AGG + chr7.1:3687787-3687806 MS.gene050941:CDS 55.0%
AGAACAGGTGAGAGAAGCCG+TGG + chr7.1:3687379-3687398 MS.gene050941:CDS 55.0%
AGAGAAGCCGTGGAGTTGTG+TGG + chr7.1:3687389-3687408 MS.gene050941:CDS 55.0%
AGAGGAGGATGAGGAGGAAG+AGG + chr7.1:3686764-3686783 MS.gene050941:intron 55.0%
AGCAATGGAAGCCTCCAGCA+CGG + chr7.1:3687489-3687508 MS.gene050941:CDS 55.0%
AGCCTCGAGGAAGAGACAGA+GGG + chr7.1:3686608-3686627 MS.gene050941:intron 55.0%
AGGGTTAGGTCAAAGGGCAG+TGG + chr7.1:3686360-3686379 MS.gene050941:CDS 55.0%
CAACTCAAAGCCTGCCTTCC+CGG + chr7.1:3688158-3688177 MS.gene050941:CDS 55.0%
CACAGGCCCGTTCGAAAACA+TGG - chr7.1:3688653-3688672 None:intergenic 55.0%
CTCGCAATCTGAGCCGGAAT+TGG - chr7.1:3687315-3687334 None:intergenic 55.0%
CTTCTCCGATGTCTGGAGGT+GGG + chr7.1:3688305-3688324 MS.gene050941:CDS 55.0%
GAAGGAGCTTCTCCGATGTC+TGG + chr7.1:3688298-3688317 MS.gene050941:CDS 55.0%
GAGGTGGGAAAACAGGTGTG+TGG + chr7.1:3687581-3687600 MS.gene050941:intron 55.0%
GAGTCCACAAGCAGCGAGTA+TGG - chr7.1:3689139-3689158 None:intergenic 55.0%
GGATGAGGAGGAAGAGGAAG+AGG + chr7.1:3686770-3686789 MS.gene050941:intron 55.0%
TCAATGTGGGGACAGACGGA+TGG - chr7.1:3689198-3689217 None:intergenic 55.0%
TTCTCCGATGTCTGGAGGTG+GGG + chr7.1:3688306-3688325 MS.gene050941:CDS 55.0%
TTGATCTGCTGCTGCATGGG+TGG - chr7.1:3688735-3688754 None:intergenic 55.0%
TTTGGATGGATGTGCGGCTG+AGG + chr7.1:3686464-3686483 MS.gene050941:CDS 55.0%
ATGGAAGCCTCCAGCACGGA+AGG + chr7.1:3687493-3687512 MS.gene050941:CDS 60.0%
ATGTGGGGACAGACGGATGG+TGG - chr7.1:3689195-3689214 None:intergenic 60.0%
CTGCTGCTGCATGGGTGGAT+TGG - chr7.1:3688730-3688749 None:intergenic 60.0%
GAGCAATTCAAGGGGCCCAG+TGG + chr7.1:3688615-3688634 MS.gene050941:CDS 60.0%
GCTTCTCCGATGTCTGGAGG+TGG + chr7.1:3688304-3688323 MS.gene050941:CDS 60.0%
GGAGCTTCTCCGATGTCTGG+AGG + chr7.1:3688301-3688320 MS.gene050941:CDS 60.0%
TCCTTACCCTTCCGTGCTGG+AGG - chr7.1:3687503-3687522 None:intergenic 60.0%
TGGAAGCCTCCAGCACGGAA+GGG + chr7.1:3687494-3687513 MS.gene050941:CDS 60.0%
TTCAAGGGGCCCAGTGGTTC+AGG + chr7.1:3688621-3688640 MS.gene050941:CDS 60.0%
! TGAACAGGTGATGGCCGGGA+AGG - chr7.1:3688175-3688194 None:intergenic 60.0%
GCCTCCAGCACGGAAGGGTA+AGG + chr7.1:3687499-3687518 MS.gene050941:CDS 65.0%
GGTGCCCCACCTCCAGACAT+CGG - chr7.1:3688313-3688332 None:intergenic 65.0%
! TGGGGACAGACGGATGGTGG+AGG - chr7.1:3689192-3689211 None:intergenic 65.0%
! CAGGTGATGGCCGGGAAGGC+AGG - chr7.1:3688171-3688190 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 3686315 3689350 3686315 ID=MS.gene050941
chr7.1 mRNA 3686315 3689350 3686315 ID=MS.gene050941.t1;Parent=MS.gene050941
chr7.1 exon 3686315 3686599 3686315 ID=MS.gene050941.t1.exon1;Parent=MS.gene050941.t1
chr7.1 CDS 3686315 3686599 3686315 ID=cds.MS.gene050941.t1;Parent=MS.gene050941.t1
chr7.1 exon 3687098 3687595 3687098 ID=MS.gene050941.t1.exon2;Parent=MS.gene050941.t1
chr7.1 CDS 3687098 3687595 3687098 ID=cds.MS.gene050941.t1;Parent=MS.gene050941.t1
chr7.1 exon 3687701 3687808 3687701 ID=MS.gene050941.t1.exon3;Parent=MS.gene050941.t1
chr7.1 CDS 3687701 3687808 3687701 ID=cds.MS.gene050941.t1;Parent=MS.gene050941.t1
chr7.1 exon 3687908 3688880 3687908 ID=MS.gene050941.t1.exon4;Parent=MS.gene050941.t1
chr7.1 CDS 3687908 3688880 3687908 ID=cds.MS.gene050941.t1;Parent=MS.gene050941.t1
chr7.1 exon 3689094 3689350 3689094 ID=MS.gene050941.t1.exon5;Parent=MS.gene050941.t1
chr7.1 CDS 3689094 3689350 3689094 ID=cds.MS.gene050941.t1;Parent=MS.gene050941.t1
Gene Sequence

>MS.gene050941

ATGGTAAAGGTAAGAAAGGTTAGTAGCAAACGTGATTTGAGAAAGAGGGTTAGGTCAAAGGGCAGTGGTTCTGATGATTCCGATGAGGATTATGTGGTTTCGGATGATGCCGGGAATGTGTCTGATTGTCCAGAGGATGATTGTTTTTCTTTGGATGGATGTGCGGCTGAGGATAGTTTTGATGGGTTTATAGAAGACGAGGATTCGGAAAAGGAGGTGATTCAACGGGTGACTAAATTTAATAGATCGAGGGCTAAAACTGGTGTAAGGCGTCAGCGGACTAATGTAAGTAAAGCCTCGAGGAAGAGACAGAGGGTTACTTATGCAGAACAACCAGAAGAAGAAGAAGAAGAAGAAGAACAAGATGAAGAAAAAGGAGACGAAGAGGAAGAAGTAGAAGAAGAGGAGGAGGAAGAAGAAGATGATGATGATTACAATGATGTTGATGAAGAGGAGGATGAGGAGGAAGAGGAAGAGGAAGAAGAAGTGGAAGTGGAAATGGAAGAGGAAGAGGAAGAGGAAGAAAAAGAAGAAGTGGAAGTGGAAGTGGAAGAGGTAGGTGAAAATGATGAGGATGATGAATTTAAACCAGAGGAAGAAGATTTCACAGATGAGGAGGAAGAAGAAACAAGGGGCAGAAAGAAGAAAAAGGATAATTCCATTTATGAAGACGAAGAATTTAAACCGGAGGACGAAGATTACACAGATGAGGAGGAAGAAGAAACAAGGCGCATTAAGAAGAAAAATAATGGCACGAAGATGGGCAAGAAGAAGGCTTTGAAGAAAAGGGTTTCTGCAACTTCTAGCAGAGGTCGAAAAAGGAGTGGTTCTAGAGTTTCAAAGAAGCCCAAGAGAAAGAGAAGACGAAAGAATGGAGGATCAACGAGGAAAGTACAGTGTGATGATGCAGATGATTTTTTGGATAATGTCCCAGCCATCAGAACAAATAGCAGAAAGAGATCAGTCCTGAAAAGGAGAAGGGTTATCCTTGAAGATGCCAATTCCGGCTCAGATTGCGAGTCTAGACCATCTGATTATGAGTTTACTATCTCTGAAGAAGAAAAAGAACAGGTGAGAGAAGCCGTGGAGTTGTGTGGAAATATAAGAAGGAACTTGAGGAGAGCTTCTCTTCGAATGGAAAATGAAGTGGTTGGACTATATGAAGATCTACATCAGCAATGGAAGCCTCCAGCACGGAAGGGTAAGGAAAAGATAGAGGAATCTCAAGGAAGAAAGGGTAAGGAAAAAGTAGAGGACTTGAAGAGTGAGGTGGGAAAACAGGTGTGTGGAATTTGTCTGTCTGAGGAAAATAAAAGAAGAGTAAGGGGAGTACTAAACAGCTGCACTCACTATTTTTGCTTTGCTTGCATTATGGAGTGGTCAAAGGTTGAATCTCGCTGCCCTTTGTGTAAGCAGAGATTCCAAACAATCAGTAAGCCTGCACGATCAACAACAGCAGAAGAGGCGGTGATACAAGTGCCCGAACGTGATCAGGTATTTGAATTTTACTTCTCGTAAAATTTTGACCATTTGCTTATGGTTTTGCAATTCAATTTGCTGATTCTTATGAAAATATTTTGATTTTACATGCAGGTTTATCAGCCAACTGAAGAAGAACTCAGGAGCTACATTGATCCATATGAGTCCGTTATGTGTTCAGAGTGTCATCTAGGTGGAGACGATGGCCTCATGCTACTCTGTGATATATGTGATTCCCCTGCACACACTTATTGTGTTGGTTTGGGGAGAGAAGTACCTGAAGGTAATTGGTACTGTGATGGTTGTAGACCAGTTGCTTTGGCATCTTTAAACTCCCAAGCTCAAGAATCTGATTTAAGAGCGGCAACTCAAAGCCTGCCTTCCCGGCCATCACCTGTTCATATACGAGAAAGTATAGACCTGAACCTGATGTCTTCACCTCATACATCTTTTAGTCAAGGGTTCGGGCATCTTTCATCTTCTAGATTTTCTGGCAGAAGTACCGAAGGAGCTTCTCCGATGTCTGGAGGTGGGGCACCAACTTTATCAGAGAGACGGTGGATACACCGTCAAGTTCAGCAGCTACAAATTCAGCAGCTACGTTCAATTGATAGAATGGCTTCTACAACTGGCAGAACTATCGGTGTTTCAGCTACCGGTACAGTAAGTAACTTGAATAGCCCTGAAATTAATAGGGAACCAAGTTCTCAACATATAAGAACACAGGACGTAGGAACATCCTATCACACATTTTTTGAGGAGAGATTAGGCAACAACATCTCTCCATTTATGCAGAATGGAGACCCCTTCTCCATAAGAATGAGCAATTCAAGGGGCCCAGTGGTTCAGGATTCAACCATGTTTTCGAACGGGCCTGTGAATGCAGCTATATGGCCTGGAATTTTGGGGACATCAACCTTATCAGATTATGGACCAATCCACCCATGCAGCAGCAGATCAAACATTGTCACTGAGGTTGGTATGCCCGCTACTGTCAAAGAAGAAGATAACTTGCACATTGTAAAGGAGCGATTGCAGTCAATGGTTAAAAGTCATCTGAAGAGATTGTCTCAAGAAGCTGATTTGGGTAATTTCTTCTATCATTTATATATCATGGTTTGTCATCATTCATTACATCATAAGGCTTCGACCATTACTAGAAATCTGTAATGGCTTTTCCTATGATACTAGAAATCTGTAATGGCTTTTCCTATGAAAAGAATCTTCGTTGAGTGTTTTGCTTTGCGTTCATACTATTTGAATTCAAATTCTTTAACATGTCTTTTATGTATTGATTCAGGTTATAGTACTTTCAAGGACATTGCAAGGAGTTCTACGCATACCATACTCGCTGCTTGTGGACTCGAGCACAATACGAGTGAGGTTTGTACTGTGCCTCCACCATCCGTCTGTCCCCACATTGAATTAATTGCTGGTGGACAAATGAGTATGATTAAAGGTTGCTGCTCCTCTTGTTTTGATTCTTTTGTAGGAGATGTGGTTAAAAGTATTTTGGACACAAGAATGTCTTCACAGTGGTTACGATTAGGACTTTAG

Protein sequence

>MS.gene050941.t1

MVKVRKVSSKRDLRKRVRSKGSGSDDSDEDYVVSDDAGNVSDCPEDDCFSLDGCAAEDSFDGFIEDEDSEKEVIQRVTKFNRSRAKTGVRRQRTNKRVSATSSRGRKRSGSRVSKKPKRKRRRKNGGSTRKVQCDDADDFLDNVPAIRTNSRKRSVLKRRRVILEDANSGSDCESRPSDYEFTISEEEKEQVREAVELCGNIRRNLRRASLRMENEVVGLYEDLHQQWKPPARKGKEKIEESQGRKGKEKVEDLKSEVGKQVESRCPLCKQRFQTISKPARSTTAEEAVIQVPERDQVYQPTEEELRSYIDPYESVMCSECHLGGDDGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQAQESDLRAATQSLPSRPSPVHIRESIDLNLMSSPHTSFSQGFGHLSSSRFSGRSTEGASPMSGGGAPTLSERRWIHRQVQQLQIQQLRSIDRMASTTGRTIGVSATGTVSNLNSPEINREPSSQHIRTQDVGTSYHTFFEERLGNNISPFMQNGDPFSIRMSNSRGPVVQDSTMFSNGPVNAAIWPGILGTSTLSDYGPIHPCSSRSNIVTEVGMPATVKEEDNLHIVKERLQSMVKSHLKRLSQEADLGYSTFKDIARSSTHTILAACGLEHNTSEVCTVPPPSVCPHIELIAGGQMSMIKGCCSSCFDSFVGDVVKSILDTRMSSQWLRLGL