AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35016

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35016.t1 MTR_4g094208 99.640 278 1 0 35 312 1 278 0.0 577
MS.gene35016.t1 MTR_2g008850 78.648 281 56 1 35 311 1 281 4.67e-168 468
MS.gene35016.t1 MTR_3g074610 75.177 282 65 1 35 311 1 282 2.08e-161 451
MS.gene35016.t1 MTR_5g063940 75.532 282 64 1 35 311 1 282 1.39e-159 446
MS.gene35016.t1 MTR_2g008850 82.128 235 42 0 77 311 1 235 3.14e-147 413
MS.gene35016.t1 MTR_5g063940 80.000 235 47 0 77 311 1 235 6.82e-139 392
MS.gene35016.t1 MTR_4g094208 99.448 181 1 0 35 215 1 181 2.07e-134 380
MS.gene35016.t1 MTR_8g463130 63.534 266 96 1 46 310 16 281 3.45e-116 337
MS.gene35016.t1 MTR_2g078760 61.423 267 102 1 46 311 67 333 5.13e-114 333
MS.gene35016.t1 MTR_8g463130 64.659 249 88 0 62 310 5 253 1.90e-113 328
MS.gene35016.t1 MTR_2g078760 62.400 250 94 0 62 311 5 254 3.92e-112 325
MS.gene35016.t1 MTR_2g078760 62.332 223 83 1 46 267 67 289 9.01e-95 282
MS.gene35016.t1 MTR_4g094542 54.118 255 116 1 56 310 111 364 9.70e-92 277
MS.gene35016.t1 MTR_1g014640 43.813 299 159 6 17 310 29 323 1.95e-69 219
MS.gene35016.t1 MTR_1g013400 43.813 299 159 6 17 310 29 323 1.95e-69 219
MS.gene35016.t1 MTR_3g105730 45.486 288 140 8 32 310 1 280 1.69e-68 216
MS.gene35016.t1 MTR_2g078760 60.694 173 67 1 46 217 67 239 2.64e-67 211
MS.gene35016.t1 MTR_3g105730 46.923 260 125 6 57 310 6 258 5.13e-67 211
MS.gene35016.t1 MTR_1g115570 43.796 274 140 7 44 310 71 337 3.97e-64 206
MS.gene35016.t1 MTR_3g091060 43.284 268 145 5 46 310 77 340 2.30e-62 202
MS.gene35016.t1 MTR_5g071550 37.838 259 143 10 64 311 124 375 8.30e-42 149
MS.gene35016.t1 MTR_3g464650 36.015 261 145 10 65 311 63 315 8.25e-39 139
MS.gene35016.t1 MTR_3g464700 38.914 221 119 9 65 277 87 299 2.79e-37 135
MS.gene35016.t1 MTR_4g125810 37.548 261 112 8 95 312 253 505 4.53e-37 139
MS.gene35016.t1 MTR_5g024340 35.371 229 130 5 94 310 123 345 1.23e-36 135
MS.gene35016.t1 MTR_1g075730 33.585 265 150 7 53 310 32 277 2.94e-36 131
MS.gene35016.t1 MTR_1g075730 32.453 265 149 6 53 310 32 273 3.20e-36 131
MS.gene35016.t1 MTR_2g040500 34.118 340 146 13 45 312 204 537 7.04e-36 135
MS.gene35016.t1 MTR_4g123080 33.755 237 129 7 94 308 94 324 1.08e-35 132
MS.gene35016.t1 MTR_4g123080 33.755 237 129 7 94 308 112 342 1.68e-35 132
MS.gene35016.t1 MTR_1g086350 34.322 236 127 7 95 308 16 245 2.55e-35 129
MS.gene35016.t1 MTR_1g086350 33.200 250 138 8 81 308 89 331 7.53e-35 130
MS.gene35016.t1 MTR_1g086350 33.200 250 138 8 81 308 105 347 1.04e-34 130
MS.gene35016.t1 MTR_2g033000 33.898 236 128 7 95 308 100 329 4.31e-34 128
MS.gene35016.t1 MTR_1g041475 32.143 280 160 5 38 310 17 273 6.16e-34 125
MS.gene35016.t1 MTR_4g116420 32.692 260 144 9 77 311 98 351 7.59e-34 127
MS.gene35016.t1 MTR_3g107880 33.852 257 143 6 77 311 37 288 1.24e-32 123
MS.gene35016.t1 MTR_1g015110 34.944 269 123 9 88 311 283 544 2.64e-32 125
MS.gene35016.t1 MTR_3g107880 33.852 257 143 6 77 311 94 345 2.73e-32 123
MS.gene35016.t1 MTR_3g107880 33.852 257 143 6 77 311 95 346 3.17e-32 123
MS.gene35016.t1 MTR_3g104710 33.459 266 133 7 88 312 279 541 3.07e-31 123
MS.gene35016.t1 MTR_6g081850 34.694 245 126 9 96 311 80 319 3.29e-31 119
MS.gene35016.t1 MTR_1g050520 30.351 313 198 9 16 311 336 645 1.38e-30 121
MS.gene35016.t1 MTR_5g071550 38.164 207 116 9 64 265 124 323 3.21e-30 117
MS.gene35016.t1 MTR_1g014190 27.987 318 152 10 62 311 22 330 5.69e-30 117
MS.gene35016.t1 MTR_3g105730 42.424 165 84 5 52 210 23 182 8.24e-30 113
MS.gene35016.t1 MTR_1g014190 27.987 318 152 10 62 311 60 368 1.00e-29 117
MS.gene35016.t1 MTR_3g068200 32.414 290 150 10 63 311 92 376 2.47e-29 115
MS.gene35016.t1 MTR_1g028300 34.276 283 154 10 56 312 105 381 4.41e-29 115
MS.gene35016.t1 MTR_5g080680 33.906 233 133 5 63 278 101 329 1.40e-28 114
MS.gene35016.t1 MTR_8g102550 32.365 241 136 6 95 311 152 389 6.44e-27 109
MS.gene35016.t1 MTR_4g007440 27.445 317 154 11 62 311 22 329 1.32e-25 105
MS.gene35016.t1 MTR_3g105880 27.358 318 154 10 62 311 22 330 2.33e-25 104
MS.gene35016.t1 MTR_5g009370 32.328 232 135 7 64 278 53 279 2.21e-24 101
MS.gene35016.t1 MTR_3g105880 29.455 275 126 9 62 277 22 287 2.95e-24 100
MS.gene35016.t1 MTR_3g491830 28.094 299 153 10 61 307 58 346 4.25e-23 98.6
MS.gene35016.t1 MTR_7g100240 31.418 261 129 10 64 277 35 292 6.42e-23 97.8
MS.gene35016.t1 MTR_1g067210 29.329 283 151 10 64 300 40 319 1.00e-21 94.4
MS.gene35016.t1 MTR_1g116260 30.249 281 146 10 66 300 47 323 1.27e-21 94.4
MS.gene35016.t1 MTR_4g118340 27.099 262 146 10 93 312 84 342 1.41e-20 91.7
MS.gene35016.t1 MTR_3g032700 30.903 288 144 11 53 295 29 306 1.90e-20 91.3
MS.gene35016.t1 MTR_4g120410 34.434 212 109 11 124 310 146 352 1.96e-20 90.9
MS.gene35016.t1 MTR_2g435550 36.111 216 108 11 120 310 143 353 4.91e-20 89.7
MS.gene35016.t1 MTR_2g435550 36.111 216 108 11 120 310 129 339 7.17e-20 89.0
MS.gene35016.t1 MTR_2g435550 37.824 193 97 10 120 294 143 330 7.88e-20 89.4
MS.gene35016.t1 MTR_1g083690 33.019 212 112 9 124 310 144 350 1.03e-19 88.6
MS.gene35016.t1 MTR_7g090550 29.771 262 127 11 64 278 41 292 1.48e-19 89.0
MS.gene35016.t1 MTR_7g081020 28.470 281 151 11 66 300 43 319 1.55e-19 88.6
MS.gene35016.t1 MTR_1g112840 28.405 257 139 7 66 278 48 303 1.63e-19 88.6
MS.gene35016.t1 MTR_8g074930 27.309 249 140 6 95 303 79 326 2.48e-19 87.8
MS.gene35016.t1 MTR_7g112490 34.434 212 106 12 124 308 172 377 4.06e-19 87.4
MS.gene35016.t1 MTR_7g112490 36.313 179 87 9 155 308 183 359 4.75e-19 87.0
MS.gene35016.t1 MTR_7g021530 38.333 180 91 9 132 294 117 293 4.94e-19 86.7
MS.gene35016.t1 MTR_1g110210 26.667 255 158 8 78 308 46 295 7.54e-19 85.9
MS.gene35016.t1 MTR_7g081020 29.231 260 133 10 66 278 43 298 9.55e-19 85.5
MS.gene35016.t1 MTR_7g021530 38.333 180 91 9 132 294 167 343 1.72e-18 85.5
MS.gene35016.t1 MTR_7g021530 38.333 180 91 9 132 294 208 384 1.92e-18 85.9
MS.gene35016.t1 MTR_4g123080 36.667 120 61 3 199 308 115 229 2.08e-18 83.6
MS.gene35016.t1 MTR_7g112430 28.326 233 143 7 95 308 68 295 6.74e-18 84.0
MS.gene35016.t1 MTR_4g013295 34.500 200 98 8 112 295 139 321 8.14e-18 83.2
MS.gene35016.t1 MTR_1g019760 28.632 234 141 9 95 308 65 292 2.00e-17 82.8
MS.gene35016.t1 MTR_1g083750 25.899 278 173 8 55 308 27 295 2.17e-17 82.4
MS.gene35016.t1 MTR_1g019760 28.632 234 141 9 95 308 65 292 2.40e-17 82.4
MS.gene35016.t1 MTR_7g029240 30.000 280 161 13 56 308 28 299 3.27e-17 82.0
MS.gene35016.t1 MTR_8g017240 36.872 179 87 8 155 310 164 339 3.62e-17 81.6
MS.gene35016.t1 MTR_2g033910 27.113 284 153 12 63 300 44 319 3.87e-17 81.3
MS.gene35016.t1 MTR_7g070510 37.179 156 82 6 155 295 188 342 8.31e-17 80.9
MS.gene35016.t1 MTR_7g080170 36.420 162 85 7 132 276 75 235 2.29e-16 79.3
MS.gene35016.t1 MTR_1g106855 27.972 286 140 10 66 300 36 306 2.53e-16 79.0
MS.gene35016.t1 MTR_7g080170 36.420 162 85 7 132 276 183 343 2.67e-16 79.7
MS.gene35016.t1 MTR_5g080680 32.620 187 105 5 63 232 101 283 4.26e-16 77.4
MS.gene35016.t1 MTR_8g074930 28.571 210 110 5 133 303 6 214 4.27e-16 77.4
MS.gene35016.t1 MTR_2g090190 32.961 179 99 8 116 277 149 323 4.93e-16 78.6
MS.gene35016.t1 MTR_7g090530 27.682 289 152 13 64 305 40 318 4.94e-16 78.6
MS.gene35016.t1 MTR_1g106855 27.652 264 128 8 66 279 36 286 6.97e-16 77.0
MS.gene35016.t1 MTR_3g101540 27.778 234 143 10 95 308 66 293 3.93e-15 75.9
MS.gene35016.t1 MTR_3g101540 27.778 234 143 10 95 308 66 293 4.70e-15 75.5
MS.gene35016.t1 MTR_1g016620 31.304 230 113 13 90 277 62 288 1.45e-14 73.6
MS.gene35016.t1 MTR_5g071550 38.889 126 69 6 77 199 136 256 2.01e-14 72.8
MS.gene35016.t1 MTR_4g113345 27.953 254 152 12 66 300 35 276 2.32e-14 73.2
MS.gene35016.t1 MTR_4g037470 30.645 186 108 8 126 294 175 356 4.23e-14 72.8
MS.gene35016.t1 MTR_0015s0140 25.632 277 155 10 66 300 54 321 5.14e-14 72.4
MS.gene35016.t1 MTR_4g037470 30.645 186 108 8 126 294 166 347 6.02e-14 72.4
MS.gene35016.t1 MTR_1g083750 28.994 169 107 4 152 308 36 203 7.30e-13 68.6
MS.gene35016.t1 MTR_7g021530 38.065 155 78 8 132 269 167 320 2.23e-12 67.0
MS.gene35016.t1 MTR_7g021530 38.065 155 78 8 132 269 208 361 3.41e-12 66.6
MS.gene35016.t1 MTR_3g032590 32.418 182 86 7 147 295 135 312 3.71e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35016.t1 AT1G34750 72.340 282 73 1 35 311 1 282 6.34e-152 427
MS.gene35016.t1 AT1G34750 72.340 282 73 1 35 311 1 282 6.34e-152 427
MS.gene35016.t1 AT1G34750 72.340 282 73 1 35 311 1 282 6.34e-152 427
MS.gene35016.t1 AT1G22280 71.886 281 75 1 35 311 1 281 1.58e-146 413
MS.gene35016.t1 AT1G22280 70.383 287 75 2 35 311 1 287 4.60e-144 407
MS.gene35016.t1 AT1G78200 62.544 283 100 3 35 311 1 283 9.48e-126 361
MS.gene35016.t1 AT1G78200 62.544 283 100 3 35 311 1 283 9.48e-126 361
MS.gene35016.t1 AT1G78200 62.544 283 100 3 35 311 1 283 9.48e-126 361
MS.gene35016.t1 AT1G34750 69.636 247 68 2 35 276 1 245 2.07e-123 353
MS.gene35016.t1 AT4G28400 62.162 259 97 1 53 310 2 260 1.80e-114 331
MS.gene35016.t1 AT3G15260 63.774 265 95 1 48 311 25 289 2.37e-114 332
MS.gene35016.t1 AT3G15260 63.774 265 95 1 48 311 25 289 2.37e-114 332
MS.gene35016.t1 AT4G28400 62.162 259 97 1 53 310 24 282 4.10e-114 331
MS.gene35016.t1 AT2G20630 59.925 267 106 1 46 311 13 279 4.85e-114 331
MS.gene35016.t1 AT2G20630 59.398 266 107 1 46 310 13 278 3.45e-111 324
MS.gene35016.t1 AT1G78200 65.966 238 78 2 77 311 1 238 9.82e-111 321
MS.gene35016.t1 AT1G78200 65.966 238 78 2 77 311 1 238 9.82e-111 321
MS.gene35016.t1 AT4G28400 61.574 216 82 1 53 267 24 239 1.41e-91 273
MS.gene35016.t1 AT1G22280 71.892 185 48 1 35 215 1 185 8.72e-90 266
MS.gene35016.t1 AT2G34740 55.600 250 105 3 64 310 88 334 1.87e-88 268
MS.gene35016.t1 AT2G34740 55.556 207 86 3 64 267 84 287 2.59e-73 228
MS.gene35016.t1 AT2G34740 55.556 207 86 3 64 267 102 305 2.71e-73 229
MS.gene35016.t1 AT5G10740 45.230 283 147 6 32 310 1 279 1.13e-71 226
MS.gene35016.t1 AT5G10740 45.230 283 147 6 32 310 1 279 1.13e-71 226
MS.gene35016.t1 AT4G31750 45.230 283 147 6 32 310 1 279 3.25e-71 223
MS.gene35016.t1 AT4G31750 45.230 283 147 6 32 310 1 279 4.99e-71 223
MS.gene35016.t1 AT4G31750 45.230 283 147 6 32 310 1 279 4.99e-71 223
MS.gene35016.t1 AT5G24940 45.645 287 140 8 32 310 1 279 2.38e-70 225
MS.gene35016.t1 AT1G43900 43.682 277 143 7 43 311 98 369 2.41e-63 204
MS.gene35016.t1 AT5G53140 40.458 262 149 5 53 311 91 348 5.37e-61 200
MS.gene35016.t1 AT5G53140 40.458 262 149 5 53 311 91 348 5.37e-61 200
MS.gene35016.t1 AT1G07160 39.615 260 138 9 64 310 123 376 1.62e-42 150
MS.gene35016.t1 AT2G30020 40.081 247 131 10 77 311 152 393 2.86e-40 145
MS.gene35016.t1 AT2G33700 34.182 275 155 7 56 310 76 344 6.15e-40 144
MS.gene35016.t1 AT3G51470 31.488 289 176 8 38 310 1 283 4.64e-38 137
MS.gene35016.t1 AT2G40180 36.614 254 136 9 76 311 140 386 1.60e-37 137
MS.gene35016.t1 AT3G51470 33.333 249 145 7 77 310 85 327 2.04e-37 137
MS.gene35016.t1 AT3G62260 34.717 265 136 8 77 310 1 259 4.76e-37 134
MS.gene35016.t1 AT3G62260 34.717 265 136 8 77 310 90 348 2.63e-36 134
MS.gene35016.t1 AT3G62260 34.717 265 136 8 77 310 91 349 2.65e-36 134
MS.gene35016.t1 AT2G25620 35.622 233 125 6 95 308 128 354 2.99e-34 129
MS.gene35016.t1 AT2G25620 35.622 233 125 6 95 308 128 354 2.99e-34 129
MS.gene35016.t1 AT5G57050 36.680 259 118 10 95 312 120 373 9.81e-34 127
MS.gene35016.t1 AT1G48040 30.982 326 184 10 18 310 32 349 1.53e-33 127
MS.gene35016.t1 AT5G57050 36.680 259 118 10 95 312 160 413 1.54e-33 127
MS.gene35016.t1 AT3G17250 33.213 277 142 9 70 310 124 393 3.77e-33 126
MS.gene35016.t1 AT1G67820 35.294 238 141 7 65 295 84 315 1.46e-32 125
MS.gene35016.t1 AT1G67820 35.294 238 141 7 65 295 120 351 3.16e-32 124
MS.gene35016.t1 AT4G26080 33.775 302 139 12 64 311 129 423 1.11e-31 122
MS.gene35016.t1 AT1G07430 35.223 247 118 7 63 278 120 355 2.81e-31 122
MS.gene35016.t1 AT1G72770 33.692 279 128 9 85 312 231 503 8.73e-31 121
MS.gene35016.t1 AT1G72770 33.692 279 128 9 85 312 231 503 8.73e-31 121
MS.gene35016.t1 AT1G72770 33.692 279 128 9 85 312 231 503 8.73e-31 121
MS.gene35016.t1 AT5G51760 32.075 318 152 11 54 311 69 382 1.47e-30 119
MS.gene35016.t1 AT5G51760 32.075 318 152 11 54 311 99 412 1.95e-30 119
MS.gene35016.t1 AT2G40860 34.375 256 136 9 77 311 307 551 3.41e-30 120
MS.gene35016.t1 AT2G29380 33.447 293 143 13 63 311 77 361 3.63e-30 117
MS.gene35016.t1 AT2G40860 34.375 256 136 9 77 311 405 649 4.93e-30 120
MS.gene35016.t1 AT1G17550 32.353 272 125 8 95 312 237 503 2.35e-28 114
MS.gene35016.t1 AT1G17550 32.353 272 125 8 95 312 237 503 2.35e-28 114
MS.gene35016.t1 AT3G23360 30.137 219 123 3 92 310 71 259 5.10e-28 109
MS.gene35016.t1 AT5G59220 33.054 239 131 6 63 278 111 343 1.83e-27 111
MS.gene35016.t1 AT1G18030 31.618 272 148 11 73 311 83 349 3.49e-27 109
MS.gene35016.t1 AT2G40860 34.156 243 128 9 77 298 405 636 4.40e-27 111
MS.gene35016.t1 AT3G11410 33.803 213 106 6 95 278 137 343 3.04e-26 107
MS.gene35016.t1 AT4G27800 29.688 320 160 13 44 307 35 345 2.20e-25 105
MS.gene35016.t1 AT2G25070 27.673 318 153 12 62 311 22 330 3.50e-25 103
MS.gene35016.t1 AT2G25070 27.673 318 153 12 62 311 22 330 3.50e-25 103
MS.gene35016.t1 AT4G31860 27.044 318 155 11 62 311 22 330 8.44e-25 102
MS.gene35016.t1 AT3G16800 40.659 182 81 9 155 311 75 254 2.05e-24 99.8
MS.gene35016.t1 AT3G16800 40.659 182 81 9 155 311 75 254 2.05e-24 99.8
MS.gene35016.t1 AT3G16800 40.659 182 81 9 155 311 170 349 8.38e-24 100
MS.gene35016.t1 AT3G16800 40.659 182 81 9 155 311 170 349 8.38e-24 100
MS.gene35016.t1 AT3G16800 40.659 182 81 9 155 311 170 349 8.38e-24 100
MS.gene35016.t1 AT4G31860 28.832 274 127 10 62 276 22 286 6.24e-23 96.7
MS.gene35016.t1 AT1G18030 33.184 223 116 9 73 267 83 300 1.35e-22 95.9
MS.gene35016.t1 AT4G27800 29.221 308 153 13 44 295 35 333 1.63e-21 93.6
MS.gene35016.t1 AT3G05640 34.457 267 123 15 91 310 88 349 2.52e-21 93.2
MS.gene35016.t1 AT3G05640 34.457 267 123 15 91 310 88 349 2.52e-21 93.2
MS.gene35016.t1 AT3G05640 34.457 267 123 15 91 310 88 349 2.52e-21 93.2
MS.gene35016.t1 AT4G08260 31.818 242 125 9 77 311 1 209 3.43e-21 90.1
MS.gene35016.t1 AT5G27930 36.190 210 104 10 124 308 148 352 4.19e-21 92.8
MS.gene35016.t1 AT5G27930 36.190 210 104 10 124 308 148 352 4.19e-21 92.8
MS.gene35016.t1 AT3G12620 30.743 296 145 12 56 300 40 326 4.33e-21 92.8
MS.gene35016.t1 AT3G12620 30.743 296 145 12 56 300 40 326 4.33e-21 92.8
MS.gene35016.t1 AT3G51370 29.433 282 147 11 66 300 46 322 5.55e-21 92.4
MS.gene35016.t1 AT3G51370 29.433 282 147 11 66 300 46 322 5.55e-21 92.4
MS.gene35016.t1 AT5G66080 31.200 250 122 10 95 300 82 325 6.92e-21 92.4
MS.gene35016.t1 AT3G55050 28.013 307 156 9 66 308 51 356 7.86e-21 92.0
MS.gene35016.t1 AT3G55050 28.013 307 156 9 66 308 51 356 7.86e-21 92.0
MS.gene35016.t1 AT4G27800 28.571 287 144 12 44 278 35 312 1.96e-20 90.1
MS.gene35016.t1 AT1G09160 29.151 271 159 10 62 308 34 295 2.45e-20 91.3
MS.gene35016.t1 AT1G09160 29.151 271 159 10 62 308 34 295 2.45e-20 91.3
MS.gene35016.t1 AT5G02760 30.534 262 123 10 66 277 39 291 3.64e-20 90.1
MS.gene35016.t1 AT4G31860 28.517 263 120 10 62 265 22 275 5.31e-20 88.2
MS.gene35016.t1 AT3G27140 31.687 243 104 9 77 311 1 189 8.15e-20 87.0
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 131 328 4.90e-19 87.4
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 131 328 4.90e-19 87.4
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 91 288 6.03e-19 87.0
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 91 288 6.03e-19 87.0
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 91 288 6.03e-19 87.0
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 91 288 6.03e-19 87.0
MS.gene35016.t1 AT1G68410 26.667 255 158 9 78 308 51 300 6.83e-19 87.0
MS.gene35016.t1 AT1G68410 26.667 255 158 9 78 308 51 300 6.83e-19 87.0
MS.gene35016.t1 AT1G68410 26.667 255 158 9 78 308 51 300 6.83e-19 87.0
MS.gene35016.t1 AT1G68410 26.667 255 158 9 78 308 51 300 6.83e-19 87.0
MS.gene35016.t1 AT5G06750 27.857 280 149 9 66 300 57 328 7.54e-19 86.7
MS.gene35016.t1 AT5G06750 27.857 280 149 9 66 300 57 328 7.54e-19 86.7
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 201 398 9.82e-19 87.0
MS.gene35016.t1 AT1G79630 35.678 199 104 8 135 310 197 394 1.13e-18 86.7
MS.gene35016.t1 AT1G47380 27.007 274 165 12 55 308 33 291 1.19e-18 86.3
MS.gene35016.t1 AT4G38520 27.476 313 154 11 66 310 48 355 1.93e-18 85.5
MS.gene35016.t1 AT4G38520 27.476 313 154 11 66 310 48 355 1.93e-18 85.5
MS.gene35016.t1 AT3G51370 30.769 208 101 7 133 300 33 237 8.10e-18 82.4
MS.gene35016.t1 AT1G16220 32.719 217 118 9 121 310 160 375 1.44e-17 83.2
MS.gene35016.t1 AT5G66080 33.173 208 96 9 133 300 17 221 1.47e-17 81.6
MS.gene35016.t1 AT5G01700 29.960 247 133 12 87 294 20 265 3.13e-16 78.6
MS.gene35016.t1 AT5G01700 29.960 247 133 12 87 294 69 314 5.69e-16 78.2
MS.gene35016.t1 AT3G02750 38.272 162 82 8 132 276 192 352 6.10e-16 78.6
MS.gene35016.t1 AT3G02750 38.272 162 82 8 132 276 192 352 6.10e-16 78.6
MS.gene35016.t1 AT3G17090 27.660 282 144 12 66 300 59 327 6.33e-16 78.2
MS.gene35016.t1 AT4G32950 29.811 265 143 13 83 310 58 316 6.60e-16 77.4
MS.gene35016.t1 AT3G17090 28.295 258 128 11 66 277 59 305 1.70e-15 76.3
MS.gene35016.t1 AT5G36250 33.505 194 109 8 120 295 171 362 3.00e-15 76.3
MS.gene35016.t1 AT4G03415 34.118 170 91 8 125 277 167 332 3.93e-15 75.9
MS.gene35016.t1 AT4G03415 34.118 170 91 8 125 277 167 332 3.93e-15 75.9
MS.gene35016.t1 AT4G03415 34.118 170 91 8 125 277 167 332 3.93e-15 75.9
MS.gene35016.t1 AT2G05050 40.404 99 53 2 219 311 92 190 2.30e-14 70.9
MS.gene35016.t1 AT1G03590 32.164 171 93 9 125 277 157 322 3.57e-14 73.2
MS.gene35016.t1 AT5G59220 31.250 192 103 6 63 231 111 296 4.77e-14 71.6
MS.gene35016.t1 AT4G33920 29.767 215 97 8 133 300 17 224 4.75e-13 68.9
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.03e-12 69.3
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.03e-12 69.3
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.03e-12 69.3
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.03e-12 69.3
MS.gene35016.t1 AT5G06750 28.436 211 107 6 132 300 38 246 1.04e-12 68.2
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.07e-12 68.9
MS.gene35016.t1 AT3G63340 24.436 266 132 8 105 311 191 446 1.09e-12 69.3
MS.gene35016.t1 AT3G63340 24.436 266 132 8 105 311 191 446 1.09e-12 69.3
MS.gene35016.t1 AT3G63340 25.188 266 130 9 105 311 191 446 1.10e-12 69.3
MS.gene35016.t1 AT3G63340 24.436 266 132 8 105 311 191 446 1.14e-12 68.9
MS.gene35016.t1 AT3G63340 24.436 266 132 8 105 311 191 446 1.16e-12 68.9
MS.gene35016.t1 AT4G33920 30.612 196 89 7 145 300 6 194 2.80e-12 66.2
MS.gene35016.t1 AT5G36250 31.250 208 109 9 120 295 171 376 3.67e-12 67.0
MS.gene35016.t1 AT5G26010 28.194 227 101 11 95 276 73 282 1.31e-11 65.1
MS.gene35016.t1 AT3G63340 30.282 142 82 5 186 311 339 479 1.42e-11 65.9

Find 79 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGCTTCAGCCTTGTTAA+AGG 0.234451 4.4:+20870807 MS.gene35016:CDS
TCATAAATAATCAGAAACTA+TGG 0.245102 4.4:+20871394 MS.gene35016:CDS
TCTTACTCACAGTCCTGATT+TGG 0.258294 4.4:+20871338 MS.gene35016:CDS
ATGCTGCCACGTTCCGTATT+AGG 0.263923 4.4:-20871492 None:intergenic
CTTGCGGTTTCTCGAGCATT+TGG 0.293242 4.4:+20872273 MS.gene35016:CDS
CTTACTCACAGTCCTGATTT+GGG 0.296069 4.4:+20871339 MS.gene35016:CDS
CCTCCACACGGGCAGGAAAA+AGG 0.304978 4.4:+20867981 MS.gene35016:CDS
AGTCAGTCGCCGGTCAAATA+TGG 0.346833 4.4:+20870789 MS.gene35016:CDS
GTACTGTGGGGTCCACTCAT+AGG 0.348501 4.4:-20867959 None:intergenic
TACTTGCTAGCGATGGTCTA+TGG 0.371643 4.4:+20872376 MS.gene35016:CDS
CTAGCTCTTGTCCTTTGAAA+TGG 0.374864 4.4:-20870875 None:intergenic
CTGCGTTGTAGTTCGTTTCA+AGG 0.376878 4.4:+20872891 MS.gene35016:CDS
GATCCTCCTCGCCCCAAATC+AGG 0.383630 4.4:-20871351 None:intergenic
GAGGTGGGAGTTGGAATATA+TGG 0.386933 4.4:+20868593 MS.gene35016:CDS
TTGAAGGTTAGCTGAAGAAT+TGG 0.396384 4.4:+20868545 MS.gene35016:intron
ATGGCTTCAGCCTTGTTAAA+GGG 0.403753 4.4:+20870808 MS.gene35016:CDS
AGAAAATTTGAGGTGGGAGT+TGG 0.412410 4.4:+20868584 MS.gene35016:CDS
TTGTTGCTTCAGCTCCAGTC+AGG 0.432313 4.4:+20868623 MS.gene35016:CDS
TGCTCGGGAGTCTCCAACAT+TGG 0.439303 4.4:-20871421 None:intergenic
GAATTTGTTCCTCACCTGAC+TGG 0.441413 4.4:-20868637 None:intergenic
GAATGTCAGGATCGGATCTC+AGG 0.441582 4.4:-20872317 None:intergenic
TGCTATATACGATGGACACC+TGG 0.446385 4.4:+20870905 MS.gene35016:CDS
TACTGATCATGAACCTAATA+CGG 0.455930 4.4:+20871479 MS.gene35016:CDS
TGCCCGTGTGGAGGTACTGT+GGG 0.461253 4.4:-20867972 None:intergenic
AAACTATGGGTCGCCAATGT+TGG 0.465870 4.4:+20871408 MS.gene35016:CDS
GGCTTTGTCTCAAACATGCC+AGG 0.470402 4.4:+20871528 MS.gene35016:CDS
AGCTTATGAGTCGACAGATC+AGG 0.471067 4.4:+20871311 MS.gene35016:CDS
CACAGTACCTCCACACGGGC+AGG 0.472274 4.4:+20867974 MS.gene35016:CDS
ACATCAGCATACTGAATGTC+AGG 0.474342 4.4:-20872330 None:intergenic
TCTATCAAGGGGAGGGGTAG+CGG 0.480200 4.4:+20871446 MS.gene35016:CDS
CGACTCATAAGCTTTAGAAA+TGG 0.482291 4.4:-20871301 None:intergenic
GCTACGTGATAGTCCTCCAT+TGG 0.489286 4.4:-20870843 None:intergenic
TGCGTTGTAGTTCGTTTCAA+GGG 0.490929 4.4:+20872892 MS.gene35016:CDS
AAAGATAAAGGATCCACAAA+AGG 0.500549 4.4:+20872813 MS.gene35016:CDS
ACTCCCGAGCAGTTCTATCA+AGG 0.504680 4.4:+20871433 MS.gene35016:CDS
ATAGTCCTCCATTGGATGGT+TGG 0.505263 4.4:-20870835 None:intergenic
TCCCCTTGATAGAACTGCTC+GGG 0.507829 4.4:-20871436 None:intergenic
CACAGTCCTGATTTGGGGCG+AGG 0.514382 4.4:+20871345 MS.gene35016:CDS
GGCATTGAACAGAGACAGTA+AGG 0.515439 4.4:+20872858 MS.gene35016:CDS
AATTATATACAGAAAATTTG+AGG 0.517785 4.4:+20868574 MS.gene35016:CDS
GCTTTAGAAATGGACATGAA+TGG 0.532144 4.4:-20871291 None:intergenic
CATAAATAATCAGAAACTAT+GGG 0.538367 4.4:+20871395 MS.gene35016:CDS
GGTTGGCTTTCCCTTTAACA+AGG 0.539372 4.4:-20870818 None:intergenic
GGAGATGTTGCTAGAGTGAA+CGG 0.553795 4.4:+20872246 MS.gene35016:intron
CTCCCGAGCAGTTCTATCAA+GGG 0.553850 4.4:+20871434 MS.gene35016:CDS
AGGCAAGAGCAGTCAGTCGC+CGG 0.556118 4.4:+20870779 MS.gene35016:CDS
GGGCGTAATTCATGCAACTC+TGG 0.556408 4.4:+20870753 MS.gene35016:CDS
ATATACAGAAAATTTGAGGT+GGG 0.557119 4.4:+20868578 MS.gene35016:CDS
GAGATGTTGCTAGAGTGAAC+GGG 0.559588 4.4:+20872247 MS.gene35016:CDS
CTCCCCTTGATAGAACTGCT+CGG 0.562021 4.4:-20871437 None:intergenic
CATTTCAAAGGACAAGAGCT+AGG 0.564093 4.4:+20870876 MS.gene35016:CDS
CGTGATAGTCCTCCATTGGA+TGG 0.568679 4.4:-20870839 None:intergenic
ATGACGGTACACTGTCTCCC+AGG 0.570908 4.4:-20870923 None:intergenic
TGCTAGCGATGGTCTATGGA+AGG 0.572471 4.4:+20872380 MS.gene35016:CDS
AGCAGTTCTATCAAGGGGAG+GGG 0.574810 4.4:+20871440 MS.gene35016:CDS
TATATACAGAAAATTTGAGG+TGG 0.582241 4.4:+20868577 MS.gene35016:CDS
GAGCAGTTCTATCAAGGGGA+GGG 0.582426 4.4:+20871439 MS.gene35016:CDS
TAGAGTGAACGGGCAGCTTG+CGG 0.583337 4.4:+20872257 MS.gene35016:CDS
AGGGAAAGCCAACCATCCAA+TGG 0.583994 4.4:+20870827 MS.gene35016:CDS
AGGCTGAAGCCATATTTGAC+CGG 0.585857 4.4:-20870798 None:intergenic
AGCATACTGAATGTCAGGAT+CGG 0.592216 4.4:-20872325 None:intergenic
CTGCCCGTGTGGAGGTACTG+TGG 0.592307 4.4:-20867973 None:intergenic
TTACTCACAGTCCTGATTTG+GGG 0.592875 4.4:+20871340 MS.gene35016:CDS
AATTCATGCAACTCTGGCAA+AGG 0.599041 4.4:+20870759 MS.gene35016:CDS
ATTTATGAGAATTGCAGTCA+CGG 0.599326 4.4:-20871379 None:intergenic
GCTATATACGATGGACACCT+GGG 0.604010 4.4:+20870906 MS.gene35016:CDS
TCCCGAGCAGTTCTATCAAG+GGG 0.619633 4.4:+20871435 MS.gene35016:CDS
CGAGCAGTTCTATCAAGGGG+AGG 0.622392 4.4:+20871438 MS.gene35016:CDS
CTTGAAACGAACTACAACGC+AGG 0.624344 4.4:-20872890 None:intergenic
AAATTTGCCGACCCTATGAG+TGG 0.629051 4.4:+20867947 None:intergenic
AGTCCTGATTTGGGGCGAGG+AGG 0.633405 4.4:+20871348 MS.gene35016:CDS
GACCCCACAGTACCTCCACA+CGG 0.637695 4.4:+20867969 MS.gene35016:CDS
GGCAGCATTGAGAACAGAGG+CGG 0.640716 4.4:+20871507 MS.gene35016:CDS
ACCCCACAGTACCTCCACAC+GGG 0.647232 4.4:+20867970 MS.gene35016:CDS
CATGAACCTAATACGGAACG+TGG 0.648300 4.4:+20871486 MS.gene35016:CDS
GAAAGCCAACCATCCAATGG+AGG 0.651663 4.4:+20870830 MS.gene35016:CDS
AGCTAAACAACTAGCTACTG+AGG 0.653567 4.4:+20872837 MS.gene35016:CDS
GCCCGTGTGGAGGTACTGTG+GGG 0.703597 4.4:-20867971 None:intergenic
CGTGGCAGCATTGAGAACAG+AGG 0.710736 4.4:+20871504 MS.gene35016:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCACAAATATATAATAA+AGG - chr4.4:20870672-20870691 None:intergenic 10.0%
!!! ATTTACTTGTTTTTTATTTT+TGG + chr4.4:20871180-20871199 MS.gene35016:intron 10.0%
!!! TATTATTTTTTGTAAAGTTA+TGG + chr4.4:20868494-20868513 MS.gene35016:intron 10.0%
!! AAAAATATAGAAACCAATTT+AGG + chr4.4:20869718-20869737 MS.gene35016:intron 15.0%
!! AAACTAAAGATATTATGTAT+TGG + chr4.4:20870999-20871018 MS.gene35016:intron 15.0%
!! AAGAAGAAATATTACAAAAT+TGG - chr4.4:20868669-20868688 None:intergenic 15.0%
!! AATTATATACAGAAAATTTG+AGG + chr4.4:20868574-20868593 MS.gene35016:CDS 15.0%
!! ACTTTGATAAAAATTGAAAT+TGG + chr4.4:20869366-20869385 MS.gene35016:intron 15.0%
!! AGAAGAAATATTACAAAATT+GGG - chr4.4:20868668-20868687 None:intergenic 15.0%
!! TAATAATAAAGTGATGAAAA+TGG - chr4.4:20872622-20872641 None:intergenic 15.0%
!! TATTATATATTTGTGAAATG+TGG + chr4.4:20870673-20870692 MS.gene35016:intron 15.0%
!!! AAATTTATGCCTTTTTTTTA+TGG + chr4.4:20868395-20868414 MS.gene35016:intron 15.0%
!!! AATTTATGCCTTTTTTTTAT+GGG + chr4.4:20868396-20868415 MS.gene35016:intron 15.0%
!!! TAAATTAAGTCAATTTTACA+AGG - chr4.4:20871165-20871184 None:intergenic 15.0%
!!! TAAATTGGTTTCTATATTTT+TGG - chr4.4:20869719-20869738 None:intergenic 15.0%
!!! TCAAAGTTTTCATTTTTAAT+AGG + chr4.4:20868351-20868370 MS.gene35016:intron 15.0%
!!! TTGTTTTTTATTTTTGGAAA+GGG + chr4.4:20871186-20871205 MS.gene35016:intron 15.0%
!!! TTTATGTTGTGATTTTATAT+AGG + chr4.4:20871251-20871270 MS.gene35016:intron 15.0%
!!! TTTTAGCTTTAGATAATAAT+AGG - chr4.4:20872432-20872451 None:intergenic 15.0%
!! AAAATTGTGAAGTAACAAAT+TGG - chr4.4:20868876-20868895 None:intergenic 20.0%
!! AAACTCAAAAATTATATGCA+TGG - chr4.4:20868714-20868733 None:intergenic 20.0%
!! ACAAAATAAAACCTACTTAA+AGG - chr4.4:20872469-20872488 None:intergenic 20.0%
!! ACATAATAACATAACAAGAA+CGG + chr4.4:20868244-20868263 MS.gene35016:intron 20.0%
!! ATAATTTAACCTCACAAAAT+TGG - chr4.4:20870140-20870159 None:intergenic 20.0%
!! CATAAATAATCAGAAACTAT+GGG + chr4.4:20871395-20871414 MS.gene35016:CDS 20.0%
!! GATTGAAAATTCTTAAAAGA+TGG - chr4.4:20872703-20872722 None:intergenic 20.0%
!! GTTAACAAAAATAGTTACAA+AGG - chr4.4:20871229-20871248 None:intergenic 20.0%
!! TAATGTTTAGTTATAGAGAA+TGG + chr4.4:20869522-20869541 MS.gene35016:intron 20.0%
!! TATGAACATTATCAAACAAT+AGG + chr4.4:20869934-20869953 MS.gene35016:intron 20.0%
!! TCATAAATAATCAGAAACTA+TGG + chr4.4:20871394-20871413 MS.gene35016:CDS 20.0%
!! TGAGTTTCATTTATTATTGT+AGG + chr4.4:20871842-20871861 MS.gene35016:intron 20.0%
!! TGATATTGCAAAAAAGATAA+AGG + chr4.4:20872801-20872820 MS.gene35016:CDS 20.0%
!! TTGTAATAATTTCTTCATGT+GGG + chr4.4:20872215-20872234 MS.gene35016:intron 20.0%
!! TTTGTAATAATTTCTTCATG+TGG + chr4.4:20872214-20872233 MS.gene35016:intron 20.0%
!!! AATTTTACGAAACTTTCATT+CGG + chr4.4:20870441-20870460 MS.gene35016:intron 20.0%
!!! ATAAAAAAAGGTGTATTACA+TGG + chr4.4:20872050-20872069 MS.gene35016:intron 20.0%
!!! ATAATTTTTGAGTTTTCCTT+TGG + chr4.4:20868719-20868738 MS.gene35016:intron 20.0%
!!! ATGAAAGTTTCGTAAAATTT+TGG - chr4.4:20870440-20870459 None:intergenic 20.0%
!!! ATTTATGCCTTTTTTTTATG+GGG + chr4.4:20868397-20868416 MS.gene35016:intron 20.0%
!!! CTTGTTTTTTATTTTTGGAA+AGG + chr4.4:20871185-20871204 MS.gene35016:intron 20.0%
!!! GTTTTCATTTTTAATAGGTA+AGG + chr4.4:20868356-20868375 MS.gene35016:intron 20.0%
!!! TATCTTTTTTGCAATATCAA+CGG - chr4.4:20872800-20872819 None:intergenic 20.0%
!!! TCTATATTTTTGGCTTTATT+AGG - chr4.4:20869709-20869728 None:intergenic 20.0%
!!! TGAATATATCCAACATATTT+TGG - chr4.4:20871927-20871946 None:intergenic 20.0%
!!! TTTAATAGGTAAGGAATTTT+CGG + chr4.4:20868365-20868384 MS.gene35016:intron 20.0%
!!! TTTTGGGTTTTATTTTTTGT+CGG + chr4.4:20869020-20869039 MS.gene35016:intron 20.0%
! ACAAGGATCTTGATAAAAAA+AGG + chr4.4:20872038-20872057 MS.gene35016:intron 25.0%
! ACACTTTCTACTAAATAGTA+GGG + chr4.4:20869186-20869205 MS.gene35016:intron 25.0%
! ACTAAAACGAAAAAGAATCA+CGG - chr4.4:20872101-20872120 None:intergenic 25.0%
! ATTAACCTTCTATGCAAATA+TGG - chr4.4:20871997-20872016 None:intergenic 25.0%
! TATATACAGAAAATTTGAGG+TGG + chr4.4:20868577-20868596 MS.gene35016:CDS 25.0%
! TCTATCCTAAATCTGTTATT+GGG + chr4.4:20870192-20870211 MS.gene35016:intron 25.0%
! TTGTCAATTGCAAAAAATAG+TGG + chr4.4:20869105-20869124 MS.gene35016:intron 25.0%
! TTTAGGTACATCAATCAAAT+AGG + chr4.4:20869735-20869754 MS.gene35016:intron 25.0%
! TTTGATTGATGTACCTAAAT+TGG - chr4.4:20869734-20869753 None:intergenic 25.0%
!! AACTTGATTTTTGTGTTTAG+GGG + chr4.4:20870733-20870752 MS.gene35016:intron 25.0%
!! AAGTGTTTCTAAGTATTACA+AGG + chr4.4:20872021-20872040 MS.gene35016:intron 25.0%
!! ATAGGCAATATACTGATTAT+GGG + chr4.4:20870491-20870510 MS.gene35016:intron 25.0%
!! ATATACAGAAAATTTGAGGT+GGG + chr4.4:20868578-20868597 MS.gene35016:CDS 25.0%
!! ATTTTATATAGGACGACTTT+TGG + chr4.4:20871262-20871281 MS.gene35016:intron 25.0%
!! CGATTTTGTCATGAATTTTA+TGG + chr4.4:20872126-20872145 MS.gene35016:intron 25.0%
!! GAACTTGATTTTTGTGTTTA+GGG + chr4.4:20870732-20870751 MS.gene35016:intron 25.0%
!! TCAAAGACTAGAACTATTTT+GGG + chr4.4:20869004-20869023 MS.gene35016:intron 25.0%
!! TCTCTTTTCTAATATCTTGA+AGG + chr4.4:20870959-20870978 MS.gene35016:CDS 25.0%
!! TGAACTTGATTTTTGTGTTT+AGG + chr4.4:20870731-20870750 MS.gene35016:intron 25.0%
!! TTTCTATTTTATGTTGTCTG+TGG + chr4.4:20871066-20871085 MS.gene35016:intron 25.0%
!!! AAACCTTCTTTTATTTCACA+AGG - chr4.4:20871886-20871905 None:intergenic 25.0%
!!! AAGATGGATTAAACCTATTA+TGG - chr4.4:20872687-20872706 None:intergenic 25.0%
!!! AATTCATGCTTTTTTGTAAC+AGG + chr4.4:20869658-20869677 MS.gene35016:intron 25.0%
!!! ATACTTTTTGCCAAAAGTAT+GGG - chr4.4:20871121-20871140 None:intergenic 25.0%
!!! GAAGTATAGATTTGTTTTTG+TGG + chr4.4:20869388-20869407 MS.gene35016:intron 25.0%
!!! GATCATTTTTATTCCAATAG+AGG + chr4.4:20870288-20870307 MS.gene35016:intron 25.0%
!!! GCTTTTTTTCCAAAATATGT+TGG + chr4.4:20871915-20871934 MS.gene35016:intron 25.0%
!!! TCTCTGACATATTTTTACTA+GGG + chr4.4:20868922-20868941 MS.gene35016:intron 25.0%
!!! TTTGGGTTTTATTTTTTGTC+GGG + chr4.4:20869021-20869040 MS.gene35016:intron 25.0%
AAAATTGTCAGCAACCAAAT+TGG + chr4.4:20869063-20869082 MS.gene35016:intron 30.0%
AAAGATAAAGGATCCACAAA+AGG + chr4.4:20872813-20872832 MS.gene35016:CDS 30.0%
AAATAGGAATGAGCTAATTC+AGG + chr4.4:20869815-20869834 MS.gene35016:intron 30.0%
AAATTGTCAGCAACCAAATT+GGG + chr4.4:20869064-20869083 MS.gene35016:intron 30.0%
AACAACACCCCATAAAAAAA+AGG - chr4.4:20868407-20868426 None:intergenic 30.0%
AACATTTCATTTATTCCTCC+AGG + chr4.4:20872756-20872775 MS.gene35016:intron 30.0%
AACCACAGTTAGAAATGAAA+TGG - chr4.4:20870614-20870633 None:intergenic 30.0%
AATAGGAATGAGCTAATTCA+GGG + chr4.4:20869816-20869835 MS.gene35016:intron 30.0%
AATGCAATGGAAAAGAAATG+AGG + chr4.4:20868026-20868045 MS.gene35016:intron 30.0%
ACAAACCATATTTGCATAGA+AGG + chr4.4:20871989-20872008 MS.gene35016:intron 30.0%
ACAAGATCGTTCTTAATCAA+AGG - chr4.4:20872732-20872751 None:intergenic 30.0%
ACCATCTCAAAATTAGGTTT+AGG - chr4.4:20870165-20870184 None:intergenic 30.0%
AGAATCTAGACTATTTGGAT+TGG - chr4.4:20872653-20872672 None:intergenic 30.0%
AGGAACAGATAAAGGAAAAT+AGG + chr4.4:20869799-20869818 MS.gene35016:intron 30.0%
AGTCCTTGTGAAATAAAAGA+AGG + chr4.4:20871880-20871899 MS.gene35016:intron 30.0%
ATACGATATAGTAACAAACC+AGG - chr4.4:20868770-20868789 None:intergenic 30.0%
ATCGTTCTTAATCAAAGGTA+TGG - chr4.4:20872727-20872746 None:intergenic 30.0%
ATTTATGAGAATTGCAGTCA+CGG - chr4.4:20871382-20871401 None:intergenic 30.0%
ATTTCATTTCTAACTGTGGT+TGG + chr4.4:20870613-20870632 MS.gene35016:intron 30.0%
CACAAAGAATCTAGACTATT+TGG - chr4.4:20872658-20872677 None:intergenic 30.0%
CATAAATGAACGAAACGTTA+TGG - chr4.4:20871623-20871642 None:intergenic 30.0%
CATAACGTTTCGTTCATTTA+TGG + chr4.4:20871621-20871640 MS.gene35016:intron 30.0%
CATCAAAAACCAATGTAAGA+TGG - chr4.4:20869605-20869624 None:intergenic 30.0%
CCATCTCAAAATTAGGTTTA+GGG - chr4.4:20870164-20870183 None:intergenic 30.0%
GAAAGTTAGAAGGGAAAAAT+TGG + chr4.4:20871791-20871810 MS.gene35016:intron 30.0%
GACACTTTCTACTAAATAGT+AGG + chr4.4:20869185-20869204 MS.gene35016:intron 30.0%
GATGGTAAGATGGTAATATT+TGG - chr4.4:20869587-20869606 None:intergenic 30.0%
GCAAAAATTGTCCATTTCAA+AGG + chr4.4:20870864-20870883 MS.gene35016:CDS 30.0%
GTATCAAAAACTCAGTATCT+TGG - chr4.4:20872359-20872378 None:intergenic 30.0%
GTCTATCCTAAATCTGTTAT+TGG + chr4.4:20870191-20870210 MS.gene35016:intron 30.0%
TACTGATCATGAACCTAATA+CGG + chr4.4:20871479-20871498 MS.gene35016:CDS 30.0%
TACTTCTCATTCCTTTAAGT+AGG + chr4.4:20872455-20872474 MS.gene35016:intron 30.0%
TATATTTGTGAAATGTGGCT+TGG + chr4.4:20870678-20870697 MS.gene35016:intron 30.0%
TATTTGGACAAATGTGCTAT+TGG + chr4.4:20872572-20872591 MS.gene35016:intron 30.0%
TCCCTAACTCAATAAAACAT+GGG - chr4.4:20868959-20868978 None:intergenic 30.0%
TGAAACCGAAAAGTCAATAA+GGG + chr4.4:20868165-20868184 MS.gene35016:intron 30.0%
TGAGACTAATAGTTTCTTGT+TGG + chr4.4:20868811-20868830 MS.gene35016:intron 30.0%
TGCTATACTCTTATGCTATA+GGG + chr4.4:20869234-20869253 MS.gene35016:intron 30.0%
TGCTGATAATTCACTGTTAT+TGG + chr4.4:20868470-20868489 MS.gene35016:intron 30.0%
TGTTTAGTTATAGAGAATGG+TGG + chr4.4:20869525-20869544 MS.gene35016:intron 30.0%
TTGGAATGTAATTAGTTGTG+TGG - chr4.4:20872528-20872547 None:intergenic 30.0%
TTTGATCAGAAAAAAGCAGA+AGG - chr4.4:20868336-20868355 None:intergenic 30.0%
TTTGTAGAGAAAACCCAATT+TGG - chr4.4:20869080-20869099 None:intergenic 30.0%
! AAAAAAGCATGAATTGAGAC+AGG - chr4.4:20869653-20869672 None:intergenic 30.0%
! AAAAAGCATGAATTGAGACA+GGG - chr4.4:20869652-20869671 None:intergenic 30.0%
! AAATATGTCAGAGACTAGTT+TGG - chr4.4:20868916-20868935 None:intergenic 30.0%
! AAGGACTTTTCTGTTACTAT+AGG + chr4.4:20869555-20869574 MS.gene35016:intron 30.0%
! AGATGCTTTTGCAAATATGA+CGG - chr4.4:20870942-20870961 None:intergenic 30.0%
! CAAAATCCAAATTCTAAGAG+TGG + chr4.4:20872545-20872564 MS.gene35016:intron 30.0%
! CACTCTTAGAATTTGGATTT+TGG - chr4.4:20872547-20872566 None:intergenic 30.0%
! CATTTTACATCTGTATACGT+AGG - chr4.4:20870642-20870661 None:intergenic 30.0%
! GATAGGCAATATACTGATTA+TGG + chr4.4:20870490-20870509 MS.gene35016:intron 30.0%
! GTCAAAGACTAGAACTATTT+TGG + chr4.4:20869003-20869022 MS.gene35016:intron 30.0%
! TCATTTCTTTTCCATTGCAT+TGG - chr4.4:20868027-20868046 None:intergenic 30.0%
! TCGTTGCAAAAGTATAGAAT+GGG + chr4.4:20871762-20871781 MS.gene35016:intron 30.0%
! TTCTCAAATTCCCATACTTT+TGG + chr4.4:20871108-20871127 MS.gene35016:intron 30.0%
! TTTATTCCAATAGAGGTATG+AGG + chr4.4:20870295-20870314 MS.gene35016:intron 30.0%
! TTTTGCTAAGAAATGGAACA+AGG - chr4.4:20868194-20868213 None:intergenic 30.0%
!! AACTTACTATGCAGTTTTGT+GGG + chr4.4:20870390-20870409 MS.gene35016:intron 30.0%
!! AATATGTCAGAGACTAGTTT+GGG - chr4.4:20868915-20868934 None:intergenic 30.0%
!! CATATTTTGGAAAAAAAGCG+AGG - chr4.4:20871914-20871933 None:intergenic 30.0%
!! GATACTTTTTGCCAAAAGTA+TGG - chr4.4:20871122-20871141 None:intergenic 30.0%
!! GTCTCTGACATATTTTTACT+AGG + chr4.4:20868921-20868940 MS.gene35016:intron 30.0%
!! TAGAAAGTGTCATCAAATAG+CGG - chr4.4:20869176-20869195 None:intergenic 30.0%
!! TTTCGTAAAATTTTGGCGTA+GGG - chr4.4:20870433-20870452 None:intergenic 30.0%
!!! GTGATGTTTTTTGTTGTTGA+AGG + chr4.4:20868529-20868548 MS.gene35016:intron 30.0%
!!! TTGGGTTTTATTTTTTGTCG+GGG + chr4.4:20869022-20869041 MS.gene35016:intron 30.0%
AAAAAAGCAGAAGGAAGATC+TGG - chr4.4:20868327-20868346 None:intergenic 35.0%
AAAAAGCAGAAGGAAGATCT+GGG - chr4.4:20868326-20868345 None:intergenic 35.0%
AAAACGAAAAAGAATCACGG+TGG - chr4.4:20872098-20872117 None:intergenic 35.0%
AAACAGAGAGGAACAGATAA+AGG + chr4.4:20869791-20869810 MS.gene35016:intron 35.0%
AAACGAAAAAGAATCACGGT+GGG - chr4.4:20872097-20872116 None:intergenic 35.0%
AACAGACAGAAATCAAGACA+CGG + chr4.4:20869841-20869860 MS.gene35016:intron 35.0%
AATAGGAGTTTCAGATCCAT+TGG + chr4.4:20869951-20869970 MS.gene35016:intron 35.0%
ACATAGATCTCAGGGTTAAT+TGG - chr4.4:20871558-20871577 None:intergenic 35.0%
ACCAATGTAAGATGGTAAGA+TGG - chr4.4:20869597-20869616 None:intergenic 35.0%
ACCATCTTACCATCTTACAT+TGG + chr4.4:20869593-20869612 MS.gene35016:intron 35.0%
ATAAACAACAACACACGACA+CGG + chr4.4:20868137-20868156 MS.gene35016:intron 35.0%
ATCAAAGTAAGCAACTCAGT+TGG - chr4.4:20869354-20869373 None:intergenic 35.0%
ATGAAGCGTGGAATAATTAC+AGG - chr4.4:20870015-20870034 None:intergenic 35.0%
ATGTTTAGTCCTAGATGTGA+GGG + chr4.4:20870256-20870275 MS.gene35016:intron 35.0%
CAAAACTGCATAGTAAGTTG+AGG - chr4.4:20870389-20870408 None:intergenic 35.0%
CAAATCTCTAGTTGAAGTGT+AGG - chr4.4:20870335-20870354 None:intergenic 35.0%
CCCTAACTCAATAAAACATG+GGG - chr4.4:20868958-20868977 None:intergenic 35.0%
CCTAAATCTGTTATTGGGAT+AGG + chr4.4:20870197-20870216 MS.gene35016:intron 35.0%
CCTATCCCAATAACAGATTT+AGG - chr4.4:20870200-20870219 None:intergenic 35.0%
CTCCATTTCATTTCTAACTG+TGG + chr4.4:20870609-20870628 MS.gene35016:intron 35.0%
CTGAAACCGAAAAGTCAATA+AGG + chr4.4:20868164-20868183 MS.gene35016:intron 35.0%
CTGCTATACTCTTATGCTAT+AGG + chr4.4:20869233-20869252 MS.gene35016:intron 35.0%
CTTTGTGCATCAACCATAAT+AGG + chr4.4:20872671-20872690 MS.gene35016:intron 35.0%
GAAACAAAAGAAACAGTGTC+AGG + chr4.4:20868098-20868117 MS.gene35016:intron 35.0%
GACACGAGGAAAATAACTAA+TGG + chr4.4:20869910-20869929 MS.gene35016:intron 35.0%
GGGTTGAATGAAAGTTAGAA+GGG + chr4.4:20871782-20871801 MS.gene35016:intron 35.0%
GTCCCTAACTCAATAAAACA+TGG - chr4.4:20868960-20868979 None:intergenic 35.0%
GTGGAATAATTACAGGAATG+TGG - chr4.4:20870008-20870027 None:intergenic 35.0%
TACATGCCACTCTTAGAATT+TGG - chr4.4:20872554-20872573 None:intergenic 35.0%
TCAAATTCTGATACGCTACA+AGG + chr4.4:20869133-20869152 MS.gene35016:intron 35.0%
TCATTTATTCCTCCAGGTAA+TGG + chr4.4:20872762-20872781 MS.gene35016:intron 35.0%
TCCACTACCATCTCAAAATT+AGG - chr4.4:20870171-20870190 None:intergenic 35.0%
TGAAATGTCGGGGAAAAAAT+TGG - chr4.4:20872497-20872516 None:intergenic 35.0%
TGTGTGTGTGATTGTTACAA+GGG - chr4.4:20868302-20868321 None:intergenic 35.0%
TTGTGTGATCTCATTTGCAT+TGG + chr4.4:20871646-20871665 MS.gene35016:intron 35.0%
TTGTGTGTGTGATTGTTACA+AGG - chr4.4:20868303-20868322 None:intergenic 35.0%
TTTATCTGTTCCTCTCTGTT+TGG - chr4.4:20869792-20869811 None:intergenic 35.0%
! AAAAGCATGAATTGAGACAG+GGG - chr4.4:20869651-20869670 None:intergenic 35.0%
! AACCTCACAAAATTGGCTTA+AGG - chr4.4:20870133-20870152 None:intergenic 35.0%
! AAGTCTTATCTCACCAAATG+AGG - chr4.4:20872175-20872194 None:intergenic 35.0%
! AATGAAGAAAAGCCCTTTTC+CGG - chr4.4:20871048-20871067 None:intergenic 35.0%
! ACATTTGATTTCTCCGGAAA+AGG + chr4.4:20871032-20871051 MS.gene35016:intron 35.0%
! ACTATTAGTCTCATGTCAAG+TGG - chr4.4:20868804-20868823 None:intergenic 35.0%
! CAACTTACTATGCAGTTTTG+TGG + chr4.4:20870389-20870408 MS.gene35016:intron 35.0%
! CACAAAATTGGCTTAAGGTA+GGG - chr4.4:20870128-20870147 None:intergenic 35.0%
! CATAATCTTACAAGCTTGCT+TGG - chr4.4:20869446-20869465 None:intergenic 35.0%
! CATTTGATTTCTCCGGAAAA+GGG + chr4.4:20871033-20871052 MS.gene35016:intron 35.0%
! CTCGTTGCAAAAGTATAGAA+TGG + chr4.4:20871761-20871780 MS.gene35016:intron 35.0%
! GTTTTCCTTTGGATTTCACA+AGG + chr4.4:20868730-20868749 MS.gene35016:intron 35.0%
! TACCTTAAGCCAATTTTGTG+AGG + chr4.4:20870128-20870147 MS.gene35016:intron 35.0%
! TAGACTATTTGGATTGGAAG+TGG - chr4.4:20872647-20872666 None:intergenic 35.0%
! TCACAAAATTGGCTTAAGGT+AGG - chr4.4:20870129-20870148 None:intergenic 35.0%
! TCATCAAATAGCGGCTATTT+TGG - chr4.4:20869167-20869186 None:intergenic 35.0%
! TCATTCGGTTTCTTTTATCG+TGG + chr4.4:20870456-20870475 MS.gene35016:intron 35.0%
! TCATTTGGTGAGATAAGACT+TGG + chr4.4:20872174-20872193 MS.gene35016:intron 35.0%
! TCTTTGACATTTTCATACGC+AGG - chr4.4:20868991-20869010 None:intergenic 35.0%
! TGATTATGGGATGATGATGA+TGG + chr4.4:20870504-20870523 MS.gene35016:intron 35.0%
! TGGAGTTATCACTATTTCTC+TGG + chr4.4:20870524-20870543 MS.gene35016:intron 35.0%
! TGGGTTGAATGAAAGTTAGA+AGG + chr4.4:20871781-20871800 MS.gene35016:intron 35.0%
! TTCTAAGAGTGGCATGTATT+TGG + chr4.4:20872556-20872575 MS.gene35016:intron 35.0%
! TTCTTCATGTGGGTTATATC+AGG + chr4.4:20872225-20872244 MS.gene35016:intron 35.0%
! TTGAAGGTTAGCTGAAGAAT+TGG + chr4.4:20868545-20868564 MS.gene35016:intron 35.0%
!! ACTTACTATGCAGTTTTGTG+GGG + chr4.4:20870391-20870410 MS.gene35016:intron 35.0%
!! CCCCATGTTTTATTGAGTTA+GGG + chr4.4:20868955-20868974 MS.gene35016:intron 35.0%
!! CCCTAAACCTAATTTTGAGA+TGG + chr4.4:20870161-20870180 MS.gene35016:intron 35.0%
!! CGACTCATAAGCTTTAGAAA+TGG - chr4.4:20871304-20871323 None:intergenic 35.0%
!! GAAGTCGTTTTGCTAAGAAA+TGG - chr4.4:20868201-20868220 None:intergenic 35.0%
!! GCTTTAGAAATGGACATGAA+TGG - chr4.4:20871294-20871313 None:intergenic 35.0%
!! GGACTTTTTGCTATATACGA+TGG + chr4.4:20870897-20870916 MS.gene35016:CDS 35.0%
!! GTTTCGTAAAATTTTGGCGT+AGG - chr4.4:20870434-20870453 None:intergenic 35.0%
!! TCCCCATGTTTTATTGAGTT+AGG + chr4.4:20868954-20868973 MS.gene35016:intron 35.0%
!! TTTTTGATACTTGCTAGCGA+TGG + chr4.4:20872369-20872388 MS.gene35016:CDS 35.0%
!!! ACCTAATTTTGAGATGGTAG+TGG + chr4.4:20870167-20870186 MS.gene35016:intron 35.0%
!!! TTTTTTATGGGGTGTTGTTC+TGG + chr4.4:20868408-20868427 MS.gene35016:intron 35.0%
AACGAAAAAGAATCACGGTG+GGG - chr4.4:20872096-20872115 None:intergenic 40.0%
AAGCCTTACAAGGACTAACT+AGG - chr4.4:20870098-20870117 None:intergenic 40.0%
AATTCATGCAACTCTGGCAA+AGG + chr4.4:20870759-20870778 MS.gene35016:CDS 40.0%
ACAGACAGAAATCAAGACAC+GGG + chr4.4:20869842-20869861 MS.gene35016:intron 40.0%
ACATCAGCATACTGAATGTC+AGG - chr4.4:20872333-20872352 None:intergenic 40.0%
ACCAACACAACATAGATCTC+AGG - chr4.4:20871567-20871586 None:intergenic 40.0%
AGATCCATTGGAACTTGTGA+TGG + chr4.4:20869963-20869982 MS.gene35016:intron 40.0%
AGCATACTGAATGTCAGGAT+CGG - chr4.4:20872328-20872347 None:intergenic 40.0%
AGCTAAACAACTAGCTACTG+AGG + chr4.4:20872837-20872856 MS.gene35016:CDS 40.0%
ATATGTCTGTGACAGAGAGA+GGG + chr4.4:20871698-20871717 MS.gene35016:intron 40.0%
ATCCAAACAAGTTTGACACG+AGG + chr4.4:20869896-20869915 MS.gene35016:intron 40.0%
CAACAACACAACCAATGCAA+TGG + chr4.4:20868013-20868032 MS.gene35016:intron 40.0%
CAATCAGCGTTGTCAAATAG+AGG - chr4.4:20869269-20869288 None:intergenic 40.0%
CATTTCAAAGGACAAGAGCT+AGG + chr4.4:20870876-20870895 MS.gene35016:CDS 40.0%
CCAACACAACATAGATCTCA+GGG - chr4.4:20871566-20871585 None:intergenic 40.0%
CTTACTCACAGTCCTGATTT+GGG + chr4.4:20871339-20871358 MS.gene35016:CDS 40.0%
CTTATCTCACCAAATGAGGT+AGG - chr4.4:20872171-20872190 None:intergenic 40.0%
GATGTTTAGTCCTAGATGTG+AGG + chr4.4:20870255-20870274 MS.gene35016:intron 40.0%
GGAGAGAAAAGAGACATTGA+AGG - chr4.4:20869333-20869352 None:intergenic 40.0%
GTGGATAGTCGTTGAAATGT+CGG - chr4.4:20872509-20872528 None:intergenic 40.0%
TAAACAACAACACACGACAC+GGG + chr4.4:20868138-20868157 MS.gene35016:intron 40.0%
TACCTCCTTGTGAAATCCAA+AGG - chr4.4:20868738-20868757 None:intergenic 40.0%
TAGACCATCACAAGTTCCAA+TGG - chr4.4:20869970-20869989 None:intergenic 40.0%
TATATACCTCCCTCACATCT+AGG - chr4.4:20870268-20870287 None:intergenic 40.0%
TCAGGGTTAATTGGAAAACC+TGG - chr4.4:20871549-20871568 None:intergenic 40.0%
TCTTACTCACAGTCCTGATT+TGG + chr4.4:20871338-20871357 MS.gene35016:CDS 40.0%
TGCATTGGACAATTATAGCG+CGG + chr4.4:20871661-20871680 MS.gene35016:intron 40.0%
TGCGTTGTAGTTCGTTTCAA+GGG + chr4.4:20872892-20872911 MS.gene35016:CDS 40.0%
TGGATAGTCGTTGAAATGTC+GGG - chr4.4:20872508-20872527 None:intergenic 40.0%
TTCAACTAGAGATTTGACCC+AGG + chr4.4:20870339-20870358 MS.gene35016:intron 40.0%
TTCCGGAGAAATCAAATGTG+AGG - chr4.4:20871031-20871050 None:intergenic 40.0%
TTCCTTTGGATTTCACAAGG+AGG + chr4.4:20868733-20868752 MS.gene35016:intron 40.0%
! AAGCCTAATAAGCATTGCCT+GGG - chr4.4:20870359-20870378 None:intergenic 40.0%
! AGAAAATTTGAGGTGGGAGT+TGG + chr4.4:20868584-20868603 MS.gene35016:CDS 40.0%
! AGTTGTTTAGCTGCCTTTTG+TGG - chr4.4:20872829-20872848 None:intergenic 40.0%
! ATCAAGAGCGTGACAAAAGT+GGG - chr4.4:20870238-20870257 None:intergenic 40.0%
! CTAGCTCTTGTCCTTTGAAA+TGG - chr4.4:20870878-20870897 None:intergenic 40.0%
! TGCCTCACATTTGATTTCTC+CGG + chr4.4:20871026-20871045 MS.gene35016:intron 40.0%
! TTACTCACAGTCCTGATTTG+GGG + chr4.4:20871340-20871359 MS.gene35016:CDS 40.0%
! TTCCTCGTGTCAAACTTGTT+TGG - chr4.4:20869901-20869920 None:intergenic 40.0%
!! ATGGCTTCAGCCTTGTTAAA+GGG + chr4.4:20870808-20870827 MS.gene35016:CDS 40.0%
!! TAAAATTTTGGCGTAGGGCT+AGG - chr4.4:20870428-20870447 None:intergenic 40.0%
!! TATGGCTTCAGCCTTGTTAA+AGG + chr4.4:20870807-20870826 MS.gene35016:CDS 40.0%
!!! GGTTGCCCTTATTGACTTTT+CGG - chr4.4:20868173-20868192 None:intergenic 40.0%
AAACTATGGGTCGCCAATGT+TGG + chr4.4:20871408-20871427 MS.gene35016:CDS 45.0%
ACCAAATGAGGTAGGCTTCA+TGG - chr4.4:20872163-20872182 None:intergenic 45.0%
ACGAAAAAGAATCACGGTGG+GGG - chr4.4:20872095-20872114 None:intergenic 45.0%
AGCTTATGAGTCGACAGATC+AGG + chr4.4:20871311-20871330 MS.gene35016:CDS 45.0%
AGGCTGAAGCCATATTTGAC+CGG - chr4.4:20870801-20870820 None:intergenic 45.0%
ATAGTCCTCCATTGGATGGT+TGG - chr4.4:20870838-20870857 None:intergenic 45.0%
CACACACCTCATACCTCTAT+TGG - chr4.4:20870304-20870323 None:intergenic 45.0%
CAGCCTAGTTAGTCCTTGTA+AGG + chr4.4:20870092-20870111 MS.gene35016:intron 45.0%
CAGTCATGAACCAAACAGAG+AGG + chr4.4:20869779-20869798 MS.gene35016:intron 45.0%
CATGAACCTAATACGGAACG+TGG + chr4.4:20871486-20871505 MS.gene35016:CDS 45.0%
CCCTGAGATCTATGTTGTGT+TGG + chr4.4:20871563-20871582 MS.gene35016:intron 45.0%
CTATTGGCACTGCATCATGT+AGG + chr4.4:20872588-20872607 MS.gene35016:intron 45.0%
CTGCGTTGTAGTTCGTTTCA+AGG + chr4.4:20872891-20872910 MS.gene35016:CDS 45.0%
CTTGAAACGAACTACAACGC+AGG - chr4.4:20872893-20872912 None:intergenic 45.0%
GAGATGTTGCTAGAGTGAAC+GGG + chr4.4:20872247-20872266 MS.gene35016:CDS 45.0%
GAGGTGGGAGTTGGAATATA+TGG + chr4.4:20868593-20868612 MS.gene35016:CDS 45.0%
GATATGTCTGTGACAGAGAG+AGG + chr4.4:20871697-20871716 MS.gene35016:intron 45.0%
GCATTGGACAATTATAGCGC+GGG + chr4.4:20871662-20871681 MS.gene35016:intron 45.0%
GCTATATACGATGGACACCT+GGG + chr4.4:20870906-20870925 MS.gene35016:CDS 45.0%
GGAGATGTTGCTAGAGTGAA+CGG + chr4.4:20872246-20872265 MS.gene35016:intron 45.0%
GGATAGTCGTTGAAATGTCG+GGG - chr4.4:20872507-20872526 None:intergenic 45.0%
TCCATGAAGCCTACCTCATT+TGG + chr4.4:20872159-20872178 MS.gene35016:intron 45.0%
TGAATTGAGACAGGGGATCA+TGG - chr4.4:20869644-20869663 None:intergenic 45.0%
TGACCCAGGCAATGCTTATT+AGG + chr4.4:20870353-20870372 MS.gene35016:intron 45.0%
TGCTATATACGATGGACACC+TGG + chr4.4:20870905-20870924 MS.gene35016:CDS 45.0%
TTGTCAAATAGAGGCTGCAG+TGG - chr4.4:20869260-20869279 None:intergenic 45.0%
TTTAGTCCTAGATGTGAGGG+AGG + chr4.4:20870259-20870278 MS.gene35016:intron 45.0%
! ACAGTACCGAGTTTGAGGTA+GGG + chr4.4:20870039-20870058 MS.gene35016:intron 45.0%
! AGAGGTATGAGGTGTGTGTT+TGG + chr4.4:20870306-20870325 MS.gene35016:intron 45.0%
! CAAGCCTAATAAGCATTGCC+TGG - chr4.4:20870360-20870379 None:intergenic 45.0%
! CATCAAGAGCGTGACAAAAG+TGG - chr4.4:20870239-20870258 None:intergenic 45.0%
! CTTCTTGATTCGCCATTACC+TGG - chr4.4:20872777-20872796 None:intergenic 45.0%
! GAATTTGTTCCTCACCTGAC+TGG - chr4.4:20868640-20868659 None:intergenic 45.0%
! GGCATTGAACAGAGACAGTA+AGG + chr4.4:20872858-20872877 MS.gene35016:CDS 45.0%
! TACTTGCTAGCGATGGTCTA+TGG + chr4.4:20872376-20872395 MS.gene35016:CDS 45.0%
! TATGCACAGTACCGAGTTTG+AGG + chr4.4:20870034-20870053 MS.gene35016:intron 45.0%
! TCGTGGTTGTTTGTGCTGAT+AGG + chr4.4:20870473-20870492 MS.gene35016:intron 45.0%
!! CAGTTTTGTGGGGATGAGTT+AGG + chr4.4:20870401-20870420 MS.gene35016:intron 45.0%
!! GGATTTCACAAGGAGGTACT+TGG + chr4.4:20868740-20868759 MS.gene35016:intron 45.0%
!! GGTTGGCTTTCCCTTTAACA+AGG - chr4.4:20870821-20870840 None:intergenic 45.0%
AAGCACCCCTACCTCAAACT+CGG - chr4.4:20870048-20870067 None:intergenic 50.0%
ACTCCCGAGCAGTTCTATCA+AGG + chr4.4:20871433-20871452 MS.gene35016:CDS 50.0%
AGCAGTTCTATCAAGGGGAG+GGG + chr4.4:20871440-20871459 MS.gene35016:CDS 50.0%
AGGGAAAGCCAACCATCCAA+TGG + chr4.4:20870827-20870846 MS.gene35016:CDS 50.0%
AGTCAGTCGCCGGTCAAATA+TGG + chr4.4:20870789-20870808 MS.gene35016:CDS 50.0%
ATGCTGCCACGTTCCGTATT+AGG - chr4.4:20871495-20871514 None:intergenic 50.0%
CGTGATAGTCCTCCATTGGA+TGG - chr4.4:20870842-20870861 None:intergenic 50.0%
CTCCCCTTGATAGAACTGCT+CGG - chr4.4:20871440-20871459 None:intergenic 50.0%
CTCCCGAGCAGTTCTATCAA+GGG + chr4.4:20871434-20871453 MS.gene35016:CDS 50.0%
CTTGCGGTTTCTCGAGCATT+TGG + chr4.4:20872273-20872292 MS.gene35016:CDS 50.0%
GAAAGCCAACCATCCAATGG+AGG + chr4.4:20870830-20870849 MS.gene35016:CDS 50.0%
GAATGTCAGGATCGGATCTC+AGG - chr4.4:20872320-20872339 None:intergenic 50.0%
GAGCAGTTCTATCAAGGGGA+GGG + chr4.4:20871439-20871458 MS.gene35016:CDS 50.0%
GCTACGTGATAGTCCTCCAT+TGG - chr4.4:20870846-20870865 None:intergenic 50.0%
GGGACTACTCAAGCCTTACA+AGG - chr4.4:20870108-20870127 None:intergenic 50.0%
GGGCGTAATTCATGCAACTC+TGG + chr4.4:20870753-20870772 MS.gene35016:CDS 50.0%
GGTACTGTGCATATGAAGCG+TGG - chr4.4:20870027-20870046 None:intergenic 50.0%
GTGGGGGTTGTGTCAACAAT+TGG - chr4.4:20872079-20872098 None:intergenic 50.0%
TCCCCTTGATAGAACTGCTC+GGG - chr4.4:20871439-20871458 None:intergenic 50.0%
TCCCGAGCAGTTCTATCAAG+GGG + chr4.4:20871435-20871454 MS.gene35016:CDS 50.0%
TCTGTGACAGAGAGAGGGAT+GGG + chr4.4:20871703-20871722 MS.gene35016:intron 50.0%
TGCTAGCGATGGTCTATGGA+AGG + chr4.4:20872380-20872399 MS.gene35016:CDS 50.0%
! AGAGAATGGTGGCGTCATGA+AGG + chr4.4:20869536-20869555 MS.gene35016:intron 50.0%
! CACAGTACCGAGTTTGAGGT+AGG + chr4.4:20870038-20870057 MS.gene35016:intron 50.0%
! CAGTACCGAGTTTGAGGTAG+GGG + chr4.4:20870040-20870059 MS.gene35016:intron 50.0%
! CGGATCTCAGGTGTGTTTTG+AGG - chr4.4:20872308-20872327 None:intergenic 50.0%
! CTTGATTCGCCATTACCTGG+AGG - chr4.4:20872774-20872793 None:intergenic 50.0%
! GGCTTTGTCTCAAACATGCC+AGG + chr4.4:20871528-20871547 MS.gene35016:CDS 50.0%
! TTGTTGCTTCAGCTCCAGTC+AGG + chr4.4:20868623-20868642 MS.gene35016:CDS 50.0%
!! AAGGAGGTACTTGGTTGACC+TGG + chr4.4:20868749-20868768 MS.gene35016:intron 50.0%
ATGACGGTACACTGTCTCCC+AGG - chr4.4:20870926-20870945 None:intergenic 55.0%
CGAGCAGTTCTATCAAGGGG+AGG + chr4.4:20871438-20871457 MS.gene35016:CDS 55.0%
CTGTGACAGAGAGAGGGATG+GGG + chr4.4:20871704-20871723 MS.gene35016:intron 55.0%
GTCTGTGACAGAGAGAGGGA+TGG + chr4.4:20871702-20871721 MS.gene35016:intron 55.0%
TAGAGTGAACGGGCAGCTTG+CGG + chr4.4:20872257-20872276 MS.gene35016:CDS 55.0%
TCTATCAAGGGGAGGGGTAG+CGG + chr4.4:20871446-20871465 MS.gene35016:CDS 55.0%
TGCTCGGGAGTCTCCAACAT+TGG - chr4.4:20871424-20871443 None:intergenic 55.0%
! CGTGGCAGCATTGAGAACAG+AGG + chr4.4:20871504-20871523 MS.gene35016:CDS 55.0%
! GGCAGCATTGAGAACAGAGG+CGG + chr4.4:20871507-20871526 MS.gene35016:CDS 55.0%
! TCACCTTTTTCCTGCCCGTG+TGG - chr4.4:20867987-20868006 None:intergenic 55.0%
ACCCCACAGTACCTCCACAC+GGG + chr4.4:20867970-20867989 MS.gene35016:CDS 60.0%
AGGCAAGAGCAGTCAGTCGC+CGG + chr4.4:20870779-20870798 MS.gene35016:CDS 60.0%
CCTCCACACGGGCAGGAAAA+AGG + chr4.4:20867981-20868000 MS.gene35016:CDS 60.0%
GACCCCACAGTACCTCCACA+CGG + chr4.4:20867969-20867988 MS.gene35016:CDS 60.0%
GATCCTCCTCGCCCCAAATC+AGG - chr4.4:20871354-20871373 None:intergenic 60.0%
GCTTCAGCTCCAGTCAGGTG+AGG + chr4.4:20868628-20868647 MS.gene35016:intron 60.0%
! CCTTTTTCCTGCCCGTGTGG+AGG - chr4.4:20867984-20868003 None:intergenic 60.0%
!! AGTCCTGATTTGGGGCGAGG+AGG + chr4.4:20871348-20871367 MS.gene35016:CDS 60.0%
!! CACAGTCCTGATTTGGGGCG+AGG + chr4.4:20871345-20871364 MS.gene35016:CDS 60.0%
!! TGCCCGTGTGGAGGTACTGT+GGG - chr4.4:20867975-20867994 None:intergenic 60.0%
CACAGTACCTCCACACGGGC+AGG + chr4.4:20867974-20867993 MS.gene35016:CDS 65.0%
!! CTGCCCGTGTGGAGGTACTG+TGG - chr4.4:20867976-20867995 None:intergenic 65.0%
!! GCCCGTGTGGAGGTACTGTG+GGG - chr4.4:20867974-20867993 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 20867962 20872918 20867962 ID=MS.gene35016
chr4.4 mRNA 20867962 20872918 20867962 ID=MS.gene35016.t1;Parent=MS.gene35016
chr4.4 exon 20867962 20868002 20867962 ID=MS.gene35016.t1.exon1;Parent=MS.gene35016.t1
chr4.4 CDS 20867962 20868002 20867962 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
chr4.4 exon 20868551 20868644 20868551 ID=MS.gene35016.t1.exon2;Parent=MS.gene35016.t1
chr4.4 CDS 20868551 20868644 20868551 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
chr4.4 exon 20870753 20870983 20870753 ID=MS.gene35016.t1.exon3;Parent=MS.gene35016.t1
chr4.4 CDS 20870753 20870983 20870753 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
chr4.4 exon 20871273 20871549 20871273 ID=MS.gene35016.t1.exon4;Parent=MS.gene35016.t1
chr4.4 CDS 20871273 20871549 20871273 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
chr4.4 exon 20872247 20872401 20872247 ID=MS.gene35016.t1.exon5;Parent=MS.gene35016.t1
chr4.4 CDS 20872247 20872401 20872247 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
chr4.4 exon 20872778 20872918 20872778 ID=MS.gene35016.t1.exon6;Parent=MS.gene35016.t1
chr4.4 CDS 20872778 20872918 20872778 ID=cds.MS.gene35016.t1;Parent=MS.gene35016.t1
Gene Sequence

>MS.gene35016

ATGAGTGGACCCCACAGTACCTCCACACGGGCAGGAAAAAGGTGAGAAACACAACAACACAACCAATGCAATGGAAAAGAAATGAGGAAAGAATGAACAAAGTATGAAAACAAAAACAGCTGTAACAATAATGAAAGAAACAAAAGAAACAGTGTCAGGTCAGCATTAGTAAGCAATAAACAACAACACACGACACGGGAAACTGAAACCGAAAAGTCAATAAGGGCAACCTTGTTCCATTTCTTAGCAAAACGACTTCTACACAAGACTTTCTCTTCTTACACATAATAACATAACAAGAACGGTTATTCATATTATCATCAATCAAATTTAAACACCCTTGTAACAATCACACACACAACCCAGATCTTCCTTCTGCTTTTTTCTGATCAAAGTTTTCATTTTTAATAGGTAAGGAATTTTCGGATTACAAAAATTTATGCCTTTTTTTTATGGGGTGTTGTTCTGGATGATAAAAAATTGTTTTTTTTTAATGATCGTGTTTTTGTGCTGATAATTCACTGTTATTGGATATTATTTTTTGTAAAGTTATGGACTTTCGTTGACGTGATGTTTTTTGTTGTTGAAGGTTAGCTGAAGAATTGGATGCTGAATTATATACAGAAAATTTGAGGTGGGAGTTGGAATATATGGACAGTCTTTGTTGCTTCAGCTCCAGTCAGGTGAGGAACAAATTCTTCTACCCAATTTTGTAATATTTCTTCTTTTCTATTTCGAATGATCAATCTCCATGCATATAATTTTTGAGTTTTCCTTTGGATTTCACAAGGAGGTACTTGGTTGACCTGGTTTGTTACTATATCGTATATAGTGTATGTCCACTTGACATGAGACTAATAGTTTCTTGTTGGACTCAAAATTTTCTAATTTTTTTTTTTTTGAGTGATGATCCAATTTGTTACTTCACAATTTTCTGTACAAAAAATACTCCCAAACTAGTCTCTGACATATTTTTACTAGGGACAAATTAGTCCCCATGTTTTATTGAGTTAGGGACTAATTTGTCCTGCGTATGAAAATGTCAAAGACTAGAACTATTTTGGGTTTTATTTTTTGTCGGGGACTAAGTTGATCTGTGAGAAAATTGTCAGCAACCAAATTGGGTTTTCTCTACAAAAAGTGTTGTCAATTGCAAAAAATAGTGGTTTTTTCAAATTCTGATACGCTACAAGGCTATAGTGCCAAAATAGCCGCTATTTGATGACACTTTCTACTAAATAGTAGGGCAATAGTGATTTGTTCATCAAATTCTGCTATACTCTTATGCTATAGGGCCACTGCAGCCTCTATTTGACAACGCTGATTGCACATGCTAGTAAATTAGTTGTTATATTACTAGTTATAACTCCTTCAATGTCTCTTTTCTCTCCAACTGAGTTGCTTACTTTGATAAAAATTGAAATTGGAAGTATAGATTTGTTTTTGTGGCTGTCAGTACAAGTTCTTCTAAAAGCTCAATTCCAAGCAAGCTTGTAAGATTATGCAAGAATTCTTTAAGCTTGAAGTGCGAGTAGTTCACGAGCATGCTTTATCTTGTACTAATGTTTAGTTATAGAGAATGGTGGCGTCATGAAGGACTTTTCTGTTACTATAGGATTACACCAAATATTACCATCTTACCATCTTACATTGGTTTTTGATGTGCTCGTTTAATATATCCATGATCCCCTGTCTCAATTCATGCTTTTTTGTAACAGGAGTAGAGCTAAATTGAGATAAACAGCCTAATAAAGCCAAAAATATAGAAACCAATTTAGGTACATCAATCAAATAGGCATAACACTTAGCGAGACACTCAGTCATGAACCAAACAGAGAGGAACAGATAAAGGAAAATAGGAATGAGCTAATTCAGGGAAAACAGACAGAAATCAAGACACGGGCAAGAATACAACACTCGAATGCTTGAATAAGATCCAAACAAGTTTGACACGAGGAAAATAACTAATGGATATGAACATTATCAAACAATAGGAGTTTCAGATCCATTGGAACTTGTGATGGTCTAACTATCACTGATTGTCCACATTCCTGTAATTATTCCACGCTTCATATGCACAGTACCGAGTTTGAGGTAGGGGTGCTTAAAATCTCATATCAATTAGAGCTGCAGCCTAGTTAGTCCTTGTAAGGCTTGAGTAGTCCCTACCTTAAGCCAATTTTGTGAGGTTAAATTATACCCTAAACCTAATTTTGAGATGGTAGTGGAGTCTATCCTAAATCTGTTATTGGGATAGGATCTCTGTTATTTCACCCACTTTTGTCACGCTCTTGATGTTTAGTCCTAGATGTGAGGGAGGTATATAGATCATTTTTATTCCAATAGAGGTATGAGGTGTGTGTTTGGACTCCTACACTTCAACTAGAGATTTGACCCAGGCAATGCTTATTAGGCTTGATTAGTCCTCAACTTACTATGCAGTTTTGTGGGGATGAGTTAGGTCCTAGCCCTACGCCAAAATTTTACGAAACTTTCATTCGGTTTCTTTTATCGTGGTTGTTTGTGCTGATAGGCAATATACTGATTATGGGATGATGATGATGGAGTTATCACTATTTCTCTGGTCTTATTAAATTTGCTGCTTATTAAGATGAAAACATGAGTTTTTTGAGTACGAAGTGTGCTTCTCCATTTCATTTCTAACTGTGGTTGGTTTCCTACGTATACAGATGTAAAATGTTTCTTTCCTTTATTATATATTTGTGAAATGTGGCTTGGTTTAACATGTCTTATAAACTCTTCTATTATTGAACTTGATTTTTGTGTTTAGGGGCGTAATTCATGCAACTCTGGCAAAGGCAAGAGCAGTCAGTCGCCGGTCAAATATGGCTTCAGCCTTGTTAAAGGGAAAGCCAACCATCCAATGGAGGACTATCACGTAGCAAAAATTGTCCATTTCAAAGGACAAGAGCTAGGACTTTTTGCTATATACGATGGACACCTGGGAGACAGTGTACCGTCATATTTGCAAAAGCATCTCTTTTCTAATATCTTGAAGGAAGTGAGTTGTTGAATCAAACTAAAGATATTATGTATTGGTTATTGCCTCACATTTGATTTCTCCGGAAAAGGGCTTTTCTTCATTTCTATTTTATGTTGTCTGTGGTACGACAATTTTCTTTCTGTTCTCAAATTCCCATACTTTTGGCAAAAAGTATCATAACGTTCTTGCGAAAGAACCTTGTAAAATTGACTTAATTTACTTGTTTTTTATTTTTGGAAAGGGACGTAATACTTGTTGAACCTTTGTAACTATTTTTGTTAACTATTTATGTTGTGATTTTATATAGGACGACTTTTGGAATGATCCATTCATGTCCATTTCTAAAGCTTATGAGTCGACAGATCAGGCAATTCTTACTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCCGTGACTGCAATTCTCATAAATAATCAGAAACTATGGGTCGCCAATGTTGGAGACTCCCGAGCAGTTCTATCAAGGGGAGGGGTAGCGGTACAAATGTCTACTGATCATGAACCTAATACGGAACGTGGCAGCATTGAGAACAGAGGCGGCTTTGTCTCAAACATGCCAGGTTTTCCAATTAACCCTGAGATCTATGTTGTGTTGGTTTTACATGTTCAACGCTGATTCATCTTACTGCTCCATAACGTTTCGTTCATTTATGGTATTGTGTGATCTCATTTGCATTGGACAATTATAGCGCGGGAAAGAAATAGATGATATGTCTGTGACAGAGAGAGGGATGGGGATAGATTTTGATTATGACATATGCATGATTTGTACTCGTTGCAAAAGTATAGAATGGGTTGAATGAAAGTTAGAAGGGAAAAATTGGTTAACTAAATCTTAAAATATCAGTTTTTTGAGTTTCATTTATTATTGTAGGAGTAAAATAAGTTGCAGTCCTTGTGAAATAAAAGAAGGTTTCTTGTCCTCGCTTTTTTTCCAAAATATGTTGGATATATTCATACCCTAATGATTCGGTAGTTGTATTTCAGAGTTAGATTGATACAAACCATATTTGCATAGAAGGTTAATCGCTAAGTGTTTCTAAGTATTACAAGGATCTTGATAAAAAAAGGTGTATTACATGGATGCCAATTGTTGACACAACCCCCACCGTGATTCTTTTTCGTTTTAGTGTTTTCGATTTTGTCATGAATTTTATGGATTTGTTTGATCCATGAAGCCTACCTCATTTGGTGAGATAAGACTTGGTTATTGTTGTTTTTGATTTTGTAATAATTTCTTCATGTGGGTTATATCAGGAGATGTTGCTAGAGTGAACGGGCAGCTTGCGGTTTCTCGAGCATTTGGAGACAAAAACCTCAAAACACACCTGAGATCCGATCCTGACATTCAGTATGCTGATGTTAACCAAGATACTGAGTTTTTGATACTTGCTAGCGATGGTCTATGGAAGGTTTGTGATTGATCTCATCTCTTTTTGCCTATTATTATCTAAAGCTAAAAATGTACTTCTCATTCCTTTAAGTAGGTTTTATTTTGTCTCAACCAATTTTTTCCCCGACATTTCAACGACTATCCACACAACTAATTACATTCCAAAATCCAAATTCTAAGAGTGGCATGTATTTGGACAAATGTGCTATTGGCACTGCATCATGTAGGATTTCATTCCATTTTCATCACTTTATTATTATTCCACTTCCAATCCAAATAGTCTAGATTCTTTGTGCATCAACCATAATAGGTTTAATCCATCTTTTAAGAATTTTCAATCTCCATACCTTTGATTAAGAACGATCTTGTACTTAACATTTCATTTATTCCTCCAGGTAATGGCGAATCAAGAAGCCGTTGATATTGCAAAAAAGATAAAGGATCCACAAAAGGCAGCTAAACAACTAGCTACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCGTTGTAGTTCGTTTCAAGGGATGA
Protein sequence

>MS.gene35016.t1

MSGPHSTSTRAGKRLAEELDAELYTENLRWELEYMDSLCCFSSSQGRNSCNSGKGKSSQSPVKYGFSLVKGKANHPMEDYHVAKIVHFKGQELGLFAIYDGHLGDSVPSYLQKHLFSNILKEDDFWNDPFMSISKAYESTDQAILTHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMSTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADVNQDTEFLILASDGLWKVMANQEAVDIAKKIKDPQKAAKQLATEALNRDSKDDISCVVVRFKG