Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060812.t1 | XP_003609376.2 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 4.90E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060812.t1 | E5KGE0 | 62.8 | 492 | 167 | 5 | 1 | 480 | 1 | 488 | 9.0e-161 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060812.t1 | G7JE65 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 3.5e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051959 | MS.gene060812 | 0.828797 | 7.36E-55 | -1.69E-46 |
| MS.gene051960 | MS.gene060812 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene057001 | MS.gene060812 | 0.829356 | 5.39E-55 | -1.69E-46 |
| MS.gene060812 | MS.gene35016 | 0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene060812 | MS.gene76159 | 0.823454 | 1.37E-53 | -1.69E-46 |
| MS.gene060812 | MS.gene85232 | 0.809639 | 1.71E-50 | -1.69E-46 |
| MS.gene060812 | MS.gene90184 | 0.812649 | 3.81E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86975 | MS.gene060812 | PPI |
| MS.gene060812 | MS.gene067452 | PPI |
| MS.gene83572 | MS.gene060812 | PPI |
| MS.gene85936 | MS.gene060812 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060812.t1 | MTR_4g114970 | 97.500 | 480 | 11 | 1 | 1 | 480 | 1 | 479 | 0.0 | 979 |
| MS.gene060812.t1 | MTR_4g114970 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 800 |
| MS.gene060812.t1 | MTR_2g104600 | 46.747 | 415 | 181 | 5 | 27 | 441 | 27 | 401 | 1.65e-131 | 387 |
| MS.gene060812.t1 | MTR_2g104600 | 43.614 | 415 | 178 | 6 | 27 | 441 | 27 | 385 | 2.42e-119 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060812.t1 | AT2G42160 | 61.179 | 492 | 175 | 6 | 1 | 480 | 1 | 488 | 0.0 | 629 |
| MS.gene060812.t1 | AT2G42160 | 62.045 | 440 | 153 | 4 | 1 | 429 | 1 | 437 | 0.0 | 577 |
| MS.gene060812.t1 | AT2G42160 | 62.129 | 404 | 139 | 4 | 1 | 393 | 1 | 401 | 0.0 | 531 |
| MS.gene060812.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene060812.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene060812.t1 | AT2G26000 | 39.056 | 466 | 245 | 10 | 27 | 480 | 22 | 460 | 1.47e-115 | 348 |
Find 103 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGCGTTCTGTGAATTT+AGG | 0.150005 | 8.1:+11428603 | None:intergenic |
| GGTGAGAGAGAATTGGAATT+AGG | 0.180412 | 8.1:+11428540 | None:intergenic |
| CTCTGCGTTCTGTGAATTTA+GGG | 0.219295 | 8.1:+11428604 | None:intergenic |
| AAACTTCTTGCCATTGAAAT+AGG | 0.232877 | 8.1:+11428247 | None:intergenic |
| AGTGAAGATTTAGAAGTTAA+TGG | 0.246664 | 8.1:-11425613 | MS.gene060812:CDS |
| GTGCGTATTCCACTTGTATC+AGG | 0.257066 | 8.1:+11427338 | None:intergenic |
| GTGAGAGAGAATTGGAATTA+GGG | 0.271739 | 8.1:+11428541 | None:intergenic |
| GTGGAGAAGGCTGCAACTTC+TGG | 0.280137 | 8.1:-11424592 | MS.gene060812:CDS |
| GAATGAGAGGGTCCTTGATT+TGG | 0.301939 | 8.1:-11424206 | MS.gene060812:CDS |
| CATTCTGCCCTTAGGTTAAT+CGG | 0.302536 | 8.1:-11424451 | MS.gene060812:intron |
| GTGAAGATTTAGAAGTTAAT+GGG | 0.313739 | 8.1:-11425612 | MS.gene060812:CDS |
| TCATCGAAGGAGAAATAATT+AGG | 0.314747 | 8.1:+11428495 | None:intergenic |
| CATCCTGTTGTTGACATAAT+CGG | 0.338420 | 8.1:+11426088 | None:intergenic |
| GAGAAGAGGTGAGAGAGAAT+TGG | 0.361552 | 8.1:+11428533 | None:intergenic |
| GTCAGACTCAAATGGAATAA+AGG | 0.364370 | 8.1:-11424040 | MS.gene060812:CDS |
| TTATGTCCATCGACTGAATC+AGG | 0.387311 | 8.1:-11425719 | MS.gene060812:CDS |
| ACAACAAATTTGGGATTATG+TGG | 0.392975 | 8.1:-11425749 | MS.gene060812:CDS |
| TTCATCATCTTCTCTTCATC+AGG | 0.396642 | 8.1:-11428434 | MS.gene060812:intron |
| ACCAACATGTCCAGTTTGCT+TGG | 0.402731 | 8.1:-11427523 | MS.gene060812:CDS |
| CCGTCTTCTTACATCTCAAT+TGG | 0.403056 | 8.1:-11424999 | MS.gene060812:CDS |
| GTCTGGGTTTGTATGATTTG+TGG | 0.411595 | 8.1:-11426027 | MS.gene060812:CDS |
| GTGGAACATTAGATGATGTC+TGG | 0.413609 | 8.1:-11426044 | MS.gene060812:CDS |
| ACTTCTTGCCTCAATTAGTA+AGG | 0.414456 | 8.1:+11424642 | None:intergenic |
| TGAAACTCACCCAAGCAAAC+TGG | 0.414850 | 8.1:+11427513 | None:intergenic |
| GGTCCTTGATTTGGAGGAAC+AGG | 0.415267 | 8.1:-11424197 | MS.gene060812:intron |
| TTCAACTTTGCTGTTAAAGA+AGG | 0.416559 | 8.1:+11425588 | None:intergenic |
| GCATTTCATACCTATTTCAA+TGG | 0.416711 | 8.1:-11428257 | MS.gene060812:CDS |
| TGTTTGAATCCCAGAGAGAC+TGG | 0.421884 | 8.1:-11427363 | MS.gene060812:intron |
| TTCTTGCTGTTTCCAGGAGA+AGG | 0.425015 | 8.1:+11423985 | None:intergenic |
| GCTCATGAGCAACCTTCTCC+TGG | 0.443145 | 8.1:-11423997 | MS.gene060812:CDS |
| GTTCACTGTATGTCTCTAGA+AGG | 0.443877 | 8.1:-11425658 | MS.gene060812:CDS |
| GGAGCGGAGAAGATGAGTTC+GGG | 0.448861 | 8.1:+11428645 | None:intergenic |
| GAGAGGAGTGTGAAGCGCTT+CGG | 0.450487 | 8.1:+11428565 | None:intergenic |
| GGCTGCAACTTCTGGCATGC+TGG | 0.450669 | 8.1:-11424584 | MS.gene060812:CDS |
| TGGAGCGGAGAAGATGAGTT+CGG | 0.454323 | 8.1:+11428644 | None:intergenic |
| GATGAAGACGATCAAGATAG+TGG | 0.455616 | 8.1:+11428451 | None:intergenic |
| AGAATTGGAATTAGGGAGAG+AGG | 0.456750 | 8.1:+11428548 | None:intergenic |
| GGAACGATGGGATGGAAGAT+AGG | 0.463072 | 8.1:-11428322 | MS.gene060812:CDS |
| CGTCGTCGACTGAGTGGACT+CGG | 0.465807 | 8.1:+11428682 | None:intergenic |
| TCTCCTTCGATGATTTCATT+CGG | 0.467942 | 8.1:-11428485 | MS.gene060812:CDS |
| CTGCCGATTATGTCAACAAC+AGG | 0.469592 | 8.1:-11426091 | MS.gene060812:CDS |
| TTATGAATCCTTACTAATTG+AGG | 0.471285 | 8.1:-11424650 | MS.gene060812:CDS |
| TCGGAATGTGAAGAAGTTGC+TGG | 0.471476 | 8.1:-11427573 | MS.gene060812:CDS |
| TTTGATTTGGTAGGAACGAT+GGG | 0.480219 | 8.1:-11428334 | MS.gene060812:intron |
| TGTATGATTTGTGGATTTGT+CGG | 0.483896 | 8.1:-11426018 | MS.gene060812:CDS |
| GTGGACATATTTGTCTTGCC+AGG | 0.485200 | 8.1:-11427273 | MS.gene060812:intron |
| TGAGAGGGTCCTTGATTTGG+AGG | 0.485934 | 8.1:-11424203 | MS.gene060812:CDS |
| GATAAGATGTCAGACTCAAA+TGG | 0.487615 | 8.1:-11424048 | MS.gene060812:CDS |
| CCGTTATTACTTACCTCAGC+AGG | 0.492902 | 8.1:+11428221 | None:intergenic |
| ATTTGTGGATTTGTCGGATG+TGG | 0.494341 | 8.1:-11426012 | MS.gene060812:CDS |
| CCAACATGTCCAGTTTGCTT+GGG | 0.495855 | 8.1:-11427522 | MS.gene060812:intron |
| GTTGCTGGGACTCCTCCAGC+TGG | 0.513889 | 8.1:-11427558 | MS.gene060812:CDS |
| CTTCTCCACTGCTTCAGATA+CGG | 0.513939 | 8.1:+11424606 | None:intergenic |
| CAGGATCAATCTAGAATTGA+CGG | 0.519347 | 8.1:-11425700 | MS.gene060812:CDS |
| TTCACTGTATGTCTCTAGAA+GGG | 0.522047 | 8.1:-11425657 | MS.gene060812:CDS |
| TTTGCTTTCCGTGGAATACT+CGG | 0.522856 | 8.1:-11427592 | MS.gene060812:CDS |
| TGCGTATTCCACTTGTATCA+GGG | 0.527421 | 8.1:+11427339 | None:intergenic |
| GTTCCACAAATAAAACAAGT+TGG | 0.529607 | 8.1:+11426060 | None:intergenic |
| CGCAAGGGCATTGAAATGAA+TGG | 0.532039 | 8.1:+11427303 | None:intergenic |
| GGTATTTCTGTACAACCAGC+TGG | 0.536457 | 8.1:+11427543 | None:intergenic |
| AAGGACATGCTATTCAGCAT+TGG | 0.544403 | 8.1:-11425810 | MS.gene060812:CDS |
| ATTGATCCTGATTCAGTCGA+TGG | 0.544517 | 8.1:+11425713 | None:intergenic |
| ATACCTGTTCCTCCAAATCA+AGG | 0.546149 | 8.1:+11424194 | None:intergenic |
| ATGAAGACGATCAAGATAGT+GGG | 0.546605 | 8.1:+11428452 | None:intergenic |
| CTTTAACAGCAAAGTTGAAG+CGG | 0.546937 | 8.1:-11425584 | MS.gene060812:intron |
| ATTTGGTAGGAACGATGGGA+TGG | 0.551457 | 8.1:-11428330 | MS.gene060812:intron |
| TGGAACATTAGATGATGTCT+GGG | 0.559204 | 8.1:-11426043 | MS.gene060812:CDS |
| TTCACATTCCGAGTATTCCA+CGG | 0.559393 | 8.1:+11427584 | None:intergenic |
| CGTATCTGAAGCAGTGGAGA+AGG | 0.559498 | 8.1:-11424605 | MS.gene060812:CDS |
| AGATTAAAGAAGCAGAAGAG+AGG | 0.561135 | 8.1:-11424394 | MS.gene060812:intron |
| CAACAAATTTGGGATTATGT+GGG | 0.563048 | 8.1:-11425748 | MS.gene060812:CDS |
| GAAGGTTGCTCATGAGCCAC+TGG | 0.563743 | 8.1:+11424003 | None:intergenic |
| CGGAATGTGAAGAAGTTGCT+GGG | 0.571574 | 8.1:-11427572 | MS.gene060812:CDS |
| TTCTTGGGATTGGGTTGGAG+CGG | 0.574169 | 8.1:+11428629 | None:intergenic |
| AATGCCCTTGCGTCTCAAAG+TGG | 0.575637 | 8.1:-11427292 | MS.gene060812:CDS |
| GATTCTCGTCGTCGACTGAG+TGG | 0.577788 | 8.1:+11428676 | None:intergenic |
| CATTGAAGTCGATGAATGAG+AGG | 0.577929 | 8.1:-11424219 | MS.gene060812:CDS |
| TAGAATTGACGGCAAGTCGA+AGG | 0.578499 | 8.1:-11425689 | MS.gene060812:CDS |
| TATGTCCACTTTGAGACGCA+AGG | 0.588521 | 8.1:+11427287 | None:intergenic |
| AGAAAGAAATGTTGTTGCTG+AGG | 0.588529 | 8.1:-11424530 | MS.gene060812:intron |
| AAGATGAGTTCGGGATCGAG+TGG | 0.588594 | 8.1:+11428654 | None:intergenic |
| AGACTCAAATGGAATAAAGG+AGG | 0.592588 | 8.1:-11424037 | MS.gene060812:CDS |
| GTGGATTTGTCGGATGTGGA+AGG | 0.595592 | 8.1:-11426008 | MS.gene060812:intron |
| CCCAAGCAAACTGGACATGT+TGG | 0.601547 | 8.1:+11427522 | None:intergenic |
| AAGCTCCGTATCTGAAGCAG+TGG | 0.608444 | 8.1:-11424611 | MS.gene060812:CDS |
| ATGTCCACTTTGAGACGCAA+GGG | 0.620907 | 8.1:+11427288 | None:intergenic |
| GACTCAAATGGAATAAAGGA+GGG | 0.622185 | 8.1:-11424036 | MS.gene060812:CDS |
| GTGGACTCGGAGGAAGAACA+TGG | 0.623052 | 8.1:+11428695 | None:intergenic |
| ACAGCGAGGATGAAGAGAAG+AGG | 0.623767 | 8.1:+11428519 | None:intergenic |
| TGAAGATTTAGAAGTTAATG+GGG | 0.626069 | 8.1:-11425611 | MS.gene060812:CDS |
| TCACTGTATGTCTCTAGAAG+GGG | 0.634476 | 8.1:-11425656 | MS.gene060812:CDS |
| CCAATTGAGATGTAAGAAGA+CGG | 0.636618 | 8.1:+11424999 | None:intergenic |
| AAACCGAATGAAATCATCGA+AGG | 0.643428 | 8.1:+11428482 | None:intergenic |
| AAAACAGAAAGTCTGGTCGA+AGG | 0.644959 | 8.1:-11423963 | MS.gene060812:CDS |
| ACAGAAAGTCTGGTCGAAGG+CGG | 0.651997 | 8.1:-11423960 | MS.gene060812:CDS |
| ATTGAAGTCGATGAATGAGA+GGG | 0.674240 | 8.1:-11424218 | MS.gene060812:CDS |
| CCTAAATTCACAGAACGCAG+AGG | 0.674835 | 8.1:-11428603 | MS.gene060812:CDS |
| AGACTGGACCCTGATACAAG+TGG | 0.679214 | 8.1:-11427347 | MS.gene060812:CDS |
| TGAAGACGATCAAGATAGTG+GGG | 0.690985 | 8.1:+11428453 | None:intergenic |
| ATTTCTGTACAACCAGCTGG+AGG | 0.702761 | 8.1:+11427546 | None:intergenic |
| AGAAATAATTAGGAACAGCG+AGG | 0.702814 | 8.1:+11428505 | None:intergenic |
| GGAGGGAACAGTCTTACCAG+TGG | 0.721862 | 8.1:-11424019 | MS.gene060812:CDS |
| CGTCGACTGAGTGGACTCGG+AGG | 0.727644 | 8.1:+11428685 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATCAACAATTA+GGG | + | chr8.1:11424296-11424315 | None:intergenic | 10.0% |
| !! | ATAATTATGAAATATTATCT+TGG | - | chr8.1:11425711-11425730 | MS.gene060812:CDS | 10.0% |
| !! | TAATTATGAAATATTATCTT+GGG | - | chr8.1:11425712-11425731 | MS.gene060812:CDS | 10.0% |
| !! | TATATAAATGACAATAAAAT+GGG | + | chr8.1:11426749-11426768 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCTAAAAAACA+AGG | - | chr8.1:11426293-11426312 | MS.gene060812:intron | 10.0% |
| !! | ATAAATTTAAAAAACGACAA+AGG | + | chr8.1:11424954-11424973 | None:intergenic | 15.0% |
| !! | CAAAATTAAAATCAACAATT+AGG | + | chr8.1:11424297-11424316 | None:intergenic | 15.0% |
| !! | CATATAGTTATTCTATAAAT+GGG | - | chr8.1:11427446-11427465 | MS.gene060812:intron | 15.0% |
| !! | CATTTATAGAATAACTATAT+GGG | + | chr8.1:11427447-11427466 | None:intergenic | 15.0% |
| !! | CCAACTTAAATTAATAATTA+GGG | + | chr8.1:11426247-11426266 | None:intergenic | 15.0% |
| !! | CTATATAAATGACAATAAAA+TGG | + | chr8.1:11426750-11426769 | None:intergenic | 15.0% |
| !! | TATTATTACACTTTAATCTT+TGG | - | chr8.1:11425435-11425454 | MS.gene060812:intron | 15.0% |
| !! | TCATAATACTAAAACAAAAA+TGG | + | chr8.1:11427983-11428002 | None:intergenic | 15.0% |
| !! | TTTAAATATGTGATCATTTA+GGG | - | chr8.1:11428396-11428415 | MS.gene060812:intron | 15.0% |
| !! | TTTGTTTAACATATTAAGTA+GGG | + | chr8.1:11426721-11426740 | None:intergenic | 15.0% |
| !!! | AAGTATGTCTAAATAAATTT+TGG | + | chr8.1:11426006-11426025 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTTCTTTTTCA+AGG | + | chr8.1:11424567-11424586 | None:intergenic | 15.0% |
| !!! | AGTAAAGTTGTTTTTTTTTT+TGG | - | chr8.1:11428344-11428363 | MS.gene060812:intron | 15.0% |
| !!! | ATTATAATGTTAACTTGTTA+AGG | + | chr8.1:11427169-11427188 | None:intergenic | 15.0% |
| !!! | CATTTTATTGTCATTTATAT+AGG | - | chr8.1:11426748-11426767 | MS.gene060812:intron | 15.0% |
| !!! | CCTAATTATTAATTTAAGTT+GGG | - | chr8.1:11426245-11426264 | MS.gene060812:intron | 15.0% |
| !!! | CTTTTTTTTTTCTTTTTCAA+GGG | + | chr8.1:11424566-11424585 | None:intergenic | 15.0% |
| !!! | TCAAATAAGTTATTTCAAAT+AGG | - | chr8.1:11424695-11424714 | MS.gene060812:intron | 15.0% |
| !!! | TGTTGATTTTAATTTTGATT+TGG | - | chr8.1:11424300-11424319 | MS.gene060812:intron | 15.0% |
| !!! | TTGTCGTTTTTTAAATTTAT+TGG | - | chr8.1:11424954-11424973 | MS.gene060812:intron | 15.0% |
| !!! | TTTTAATCTAGATATAAAGA+AGG | - | chr8.1:11426818-11426837 | MS.gene060812:intron | 15.0% |
| !!! | TTTTGTTTAACATATTAAGT+AGG | + | chr8.1:11426722-11426741 | None:intergenic | 15.0% |
| !! | AATAGGACTTAAGTAAAAAT+AGG | - | chr8.1:11424712-11424731 | MS.gene060812:intron | 20.0% |
| !! | ACTTATGATGTTTATATTGT+AGG | - | chr8.1:11426532-11426551 | MS.gene060812:intron | 20.0% |
| !! | CCATATAGTTATTCTATAAA+TGG | - | chr8.1:11427445-11427464 | MS.gene060812:intron | 20.0% |
| !! | CCATTTATAGAATAACTATA+TGG | + | chr8.1:11427448-11427467 | None:intergenic | 20.0% |
| !! | CCCAACTTAAATTAATAATT+AGG | + | chr8.1:11426248-11426267 | None:intergenic | 20.0% |
| !! | CCCTAATTATTAATTTAAGT+TGG | - | chr8.1:11426244-11426263 | MS.gene060812:intron | 20.0% |
| !! | GTTTAAATATGTGATCATTT+AGG | - | chr8.1:11428395-11428414 | MS.gene060812:intron | 20.0% |
| !! | TCATTAAAAATTCAGAAATG+TGG | - | chr8.1:11428223-11428242 | MS.gene060812:intron | 20.0% |
| !! | TGAAATGAAGCTTATATTTA+GGG | - | chr8.1:11424855-11424874 | MS.gene060812:intron | 20.0% |
| !! | TGGAAATATTATTGTATTGA+TGG | - | chr8.1:11426491-11426510 | MS.gene060812:intron | 20.0% |
| !! | TTAAACATGTAATGAGAATA+TGG | + | chr8.1:11428381-11428400 | None:intergenic | 20.0% |
| !! | TTCAAAAAAGACTTGTATTT+AGG | - | chr8.1:11424889-11424908 | MS.gene060812:intron | 20.0% |
| !! | TTGAAATGAAGCTTATATTT+AGG | - | chr8.1:11424854-11424873 | MS.gene060812:intron | 20.0% |
| !! | TTTATCTTTATACAAGAGTT+TGG | + | chr8.1:11425866-11425885 | None:intergenic | 20.0% |
| !!! | AAGGTATTAATTGATTATTG+AGG | + | chr8.1:11424935-11424954 | None:intergenic | 20.0% |
| !!! | ACTAAATGGATTTTAATATC+TGG | + | chr8.1:11426215-11426234 | None:intergenic | 20.0% |
| !!! | ATTACAGAACTTTTTCAAAA+TGG | + | chr8.1:11424256-11424275 | None:intergenic | 20.0% |
| !!! | ATTTTAGAACACAACAAATT+TGG | - | chr8.1:11426888-11426907 | MS.gene060812:intron | 20.0% |
| !!! | ATTTTATGCTGATACTAATT+TGG | - | chr8.1:11427298-11427317 | MS.gene060812:CDS | 20.0% |
| !!! | ATTTTCTAAAAAACAAGGAA+GGG | - | chr8.1:11426298-11426317 | MS.gene060812:intron | 20.0% |
| !!! | GAGAATATCATAATTTTGTT+TGG | - | chr8.1:11425742-11425761 | MS.gene060812:CDS | 20.0% |
| !!! | GATTTTAATTTTGATTTGGT+AGG | - | chr8.1:11424304-11424323 | MS.gene060812:intron | 20.0% |
| !!! | TATTTTCTAAAAAACAAGGA+AGG | - | chr8.1:11426297-11426316 | MS.gene060812:intron | 20.0% |
| !!! | TTTTAGAACACAACAAATTT+GGG | - | chr8.1:11426889-11426908 | MS.gene060812:intron | 20.0% |
| !!! | TTTTATGCTGATACTAATTT+GGG | - | chr8.1:11427299-11427318 | MS.gene060812:CDS | 20.0% |
| ! | AAAGAGAGATATACGTAATA+AGG | + | chr8.1:11424984-11425003 | None:intergenic | 25.0% |
| ! | AAAGATAAAAGATGCAACAT+GGG | - | chr8.1:11425877-11425896 | MS.gene060812:intron | 25.0% |
| ! | AAGTGATGTAATTTATAGTG+TGG | - | chr8.1:11427831-11427850 | MS.gene060812:intron | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr8.1:11424685-11424704 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAATTTCAAGGA+TGG | + | chr8.1:11427702-11427721 | None:intergenic | 25.0% |
| ! | AGTGAAGATTTAGAAGTTAA+TGG | - | chr8.1:11427034-11427053 | MS.gene060812:intron | 25.0% |
| ! | ATTACACTTTAATCTTTGGT+TGG | - | chr8.1:11425439-11425458 | MS.gene060812:intron | 25.0% |
| ! | ATTGGAAAACTTCTATACAA+AGG | + | chr8.1:11428498-11428517 | None:intergenic | 25.0% |
| ! | CATGACAAAGTACAAATTTA+TGG | + | chr8.1:11424462-11424481 | None:intergenic | 25.0% |
| ! | CGGAAAGCAAAAATAAAATA+TGG | + | chr8.1:11425046-11425065 | None:intergenic | 25.0% |
| ! | GAAATGAAGCTTATATTTAG+GGG | - | chr8.1:11424856-11424875 | MS.gene060812:intron | 25.0% |
| ! | GTAAACATTAAACTCTATTC+AGG | - | chr8.1:11427741-11427760 | MS.gene060812:intron | 25.0% |
| ! | GTGAAGATTTAGAAGTTAAT+GGG | - | chr8.1:11427035-11427054 | MS.gene060812:intron | 25.0% |
| ! | GTGTAATAATATGTCAAAAC+AGG | + | chr8.1:11425426-11425445 | None:intergenic | 25.0% |
| ! | TAAAGATAAAAGATGCAACA+TGG | - | chr8.1:11425876-11425895 | MS.gene060812:intron | 25.0% |
| ! | TAACTTCATTCCAAACAAAT+TGG | + | chr8.1:11428302-11428321 | None:intergenic | 25.0% |
| ! | TCAAATGATGATCAAAATGT+AGG | - | chr8.1:11425010-11425029 | MS.gene060812:CDS | 25.0% |
| ! | TCTATACAAAGGATTAATGA+AGG | + | chr8.1:11428487-11428506 | None:intergenic | 25.0% |
| ! | TGAAGATTTAGAAGTTAATG+GGG | - | chr8.1:11427036-11427055 | MS.gene060812:intron | 25.0% |
| ! | TTATGAATCCTTACTAATTG+AGG | - | chr8.1:11427997-11428016 | MS.gene060812:intron | 25.0% |
| !! | ACCTTAACAAGTTTTTAACA+AGG | - | chr8.1:11427139-11427158 | MS.gene060812:intron | 25.0% |
| !! | CAATTTTATTGTTCTCTGAT+GGG | - | chr8.1:11428514-11428533 | MS.gene060812:CDS | 25.0% |
| !!! | ATAGGTATAGTGTTTTGATT+AGG | - | chr8.1:11424343-11424362 | MS.gene060812:intron | 25.0% |
| !!! | ATCAGTTCTTTAATTTTCGT+TGG | - | chr8.1:11426674-11426693 | MS.gene060812:intron | 25.0% |
| !!! | CTTGAAATTTTTTTCACTGT+GGG | - | chr8.1:11427704-11427723 | MS.gene060812:intron | 25.0% |
| !!! | GTTTTTTGTATAAGCTATCT+TGG | - | chr8.1:11424593-11424612 | MS.gene060812:CDS | 25.0% |
| !!! | TACACTTTTCTAGTTCATTT+TGG | + | chr8.1:11428093-11428112 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTGTTTTGTCA+GGG | - | chr8.1:11426772-11426791 | MS.gene060812:intron | 25.0% |
| !!! | TATTTTATTTTTGCTTTCCG+TGG | - | chr8.1:11425046-11425065 | MS.gene060812:intron | 25.0% |
| !!! | TTATTTGCTTTTGTTTTGTC+AGG | - | chr8.1:11426771-11426790 | MS.gene060812:intron | 25.0% |
| !!! | TTGAAATTTTTTTCACTGTG+GGG | - | chr8.1:11427705-11427724 | MS.gene060812:intron | 25.0% |
| AAACACTTATGAGACTGTTT+GGG | + | chr8.1:11424659-11424678 | None:intergenic | 30.0% | |
| AAACTTCTTGCCATTGAAAT+AGG | + | chr8.1:11424403-11424422 | None:intergenic | 30.0% | |
| AAGAGTTATATTGCCTAACT+AGG | - | chr8.1:11425556-11425575 | MS.gene060812:intron | 30.0% | |
| AGCAAGCAATAAGGAAATAT+AGG | + | chr8.1:11428153-11428172 | None:intergenic | 30.0% | |
| CATATAGATGTGTTCAATTC+TGG | - | chr8.1:11424788-11424807 | MS.gene060812:intron | 30.0% | |
| CCAAAGTTTAAGAACGTATT+TGG | - | chr8.1:11425670-11425689 | MS.gene060812:CDS | 30.0% | |
| CCAAATACGTTCTTAAACTT+TGG | + | chr8.1:11425673-11425692 | None:intergenic | 30.0% | |
| CCACAGTGAAAAAAATTTCA+AGG | + | chr8.1:11427706-11427725 | None:intergenic | 30.0% | |
| CCATCAGAGAACAATAAAAT+TGG | + | chr8.1:11428516-11428535 | None:intergenic | 30.0% | |
| GACATACTTCACTTATTGTT+CGG | - | chr8.1:11426017-11426036 | MS.gene060812:CDS | 30.0% | |
| GATGTGTAAACATTGTTTCA+TGG | - | chr8.1:11427499-11427518 | MS.gene060812:intron | 30.0% | |
| GCATGTGAAAGAAAAATCAT+CGG | + | chr8.1:11427579-11427598 | None:intergenic | 30.0% | |
| GCATTTCATACCTATTTCAA+TGG | - | chr8.1:11424390-11424409 | MS.gene060812:intron | 30.0% | |
| GTTCCACAAATAAAACAAGT+TGG | + | chr8.1:11426590-11426609 | None:intergenic | 30.0% | |
| GTTTCTTTCACTTATGATGA+AGG | - | chr8.1:11427867-11427886 | MS.gene060812:intron | 30.0% | |
| TAAACACTTATGAGACTGTT+TGG | + | chr8.1:11424660-11424679 | None:intergenic | 30.0% | |
| TAGGGAGAAAATACACTAAA+TGG | + | chr8.1:11426229-11426248 | None:intergenic | 30.0% | |
| TCATCGAAGGAGAAATAATT+AGG | + | chr8.1:11424155-11424174 | None:intergenic | 30.0% | |
| TGAACACATCTATATGCAAA+AGG | + | chr8.1:11424784-11424803 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTTTCATGGAAT+GGG | + | chr8.1:11425411-11425430 | None:intergenic | 30.0% |
| ! | AAACAAATTGGTAGCTTAAG+TGG | + | chr8.1:11428290-11428309 | None:intergenic | 30.0% |
| ! | ACAACAAATTTGGGATTATG+TGG | - | chr8.1:11426898-11426917 | MS.gene060812:intron | 30.0% |
| ! | ACTTAAGCTACCAATTTGTT+TGG | - | chr8.1:11428289-11428308 | MS.gene060812:CDS | 30.0% |
| ! | CAACAAATTTGGGATTATGT+GGG | - | chr8.1:11426899-11426918 | MS.gene060812:intron | 30.0% |
| ! | CCAATTTTATTGTTCTCTGA+TGG | - | chr8.1:11428513-11428532 | MS.gene060812:CDS | 30.0% |
| ! | CTAGGTTGGAAAAAATTGAT+AGG | + | chr8.1:11425921-11425940 | None:intergenic | 30.0% |
| ! | CTCTGTCACTGATTAATTAA+TGG | - | chr8.1:11427598-11427617 | MS.gene060812:CDS | 30.0% |
| ! | TATGTCAAAACAGGTTTTCA+TGG | + | chr8.1:11425417-11425436 | None:intergenic | 30.0% |
| ! | TGTATGATTTGTGGATTTGT+CGG | - | chr8.1:11426629-11426648 | MS.gene060812:intron | 30.0% |
| !! | AATTCTGGCTTCTTATCTTT+AGG | - | chr8.1:11424803-11424822 | MS.gene060812:intron | 30.0% |
| !! | ATTCTGGCTTCTTATCTTTA+GGG | - | chr8.1:11424804-11424823 | MS.gene060812:intron | 30.0% |
| !! | GCCTTGTTAAAAACTTGTTA+AGG | + | chr8.1:11427143-11427162 | None:intergenic | 30.0% |
| !! | TGTGAATTTAGGGTTTTCTT+GGG | + | chr8.1:11424036-11424055 | None:intergenic | 30.0% |
| !! | TGTTTGCTGTGTAATTAACA+CGG | - | chr8.1:11427366-11427385 | MS.gene060812:intron | 30.0% |
| !! | TTCAACTTTGCTGTTAAAGA+AGG | + | chr8.1:11427062-11427081 | None:intergenic | 30.0% |
| !!! | AACAAAAGCACTGGTTTTAT+TGG | - | chr8.1:11426459-11426478 | MS.gene060812:intron | 30.0% |
| !!! | AAGCCAACTTGTTTTATTTG+TGG | - | chr8.1:11426584-11426603 | MS.gene060812:intron | 30.0% |
| !!! | CCTTGAAATTTTTTTCACTG+TGG | - | chr8.1:11427703-11427722 | MS.gene060812:intron | 30.0% |
| !!! | CTATCAATTTTTTCCAACCT+AGG | - | chr8.1:11425919-11425938 | MS.gene060812:intron | 30.0% |
| AAACCGAATGAAATCATCGA+AGG | + | chr8.1:11424168-11424187 | None:intergenic | 35.0% | |
| AACGAGTTTGAAAGTTTCTC+AGG | - | chr8.1:11425626-11425645 | MS.gene060812:CDS | 35.0% | |
| AAGCTATCTTGGACATCTTA+TGG | - | chr8.1:11424604-11424623 | MS.gene060812:CDS | 35.0% | |
| AAGGTAACAACTTCAACACA+TGG | - | chr8.1:11426169-11426188 | MS.gene060812:intron | 35.0% | |
| AATTGCTATGATACTCGCAA+TGG | - | chr8.1:11427899-11427918 | MS.gene060812:intron | 35.0% | |
| ACAACCAAATGTGTGACATT+AGG | + | chr8.1:11427525-11427544 | None:intergenic | 35.0% | |
| ACCTTTATACCATCCACTTT+GGG | + | chr8.1:11425802-11425821 | None:intergenic | 35.0% | |
| ACTTCTTGCCTCAATTAGTA+AGG | + | chr8.1:11428008-11428027 | None:intergenic | 35.0% | |
| AGAAAGAAATGTTGTTGCTG+AGG | - | chr8.1:11428117-11428136 | MS.gene060812:intron | 35.0% | |
| AGAAATAATTAGGAACAGCG+AGG | + | chr8.1:11424145-11424164 | None:intergenic | 35.0% | |
| AGACTCAAATGGAATAAAGG+AGG | - | chr8.1:11428610-11428629 | MS.gene060812:CDS | 35.0% | |
| AGATTAAAGAAGCAGAAGAG+AGG | - | chr8.1:11428253-11428272 | MS.gene060812:CDS | 35.0% | |
| AGCAAACAAAATCATACCAC+AGG | + | chr8.1:11427354-11427373 | None:intergenic | 35.0% | |
| AGCAAGAAAAACAGAAAGTC+TGG | - | chr8.1:11428677-11428696 | MS.gene060812:CDS | 35.0% | |
| AGTTTGCAGCTTATAGGATA+AGG | - | chr8.1:11424519-11424538 | MS.gene060812:intron | 35.0% | |
| ATACTTCACTTATTGTTCGG+AGG | - | chr8.1:11426020-11426039 | MS.gene060812:CDS | 35.0% | |
| ATGAAGACGATCAAGATAGT+GGG | + | chr8.1:11424198-11424217 | None:intergenic | 35.0% | |
| ATGAGCTTAATATCCTAGGT+TGG | + | chr8.1:11425935-11425954 | None:intergenic | 35.0% | |
| ATGATTCTTCATGAGAAGCT+TGG | - | chr8.1:11425509-11425528 | MS.gene060812:intron | 35.0% | |
| ATTGAAGTCGATGAATGAGA+GGG | - | chr8.1:11428429-11428448 | MS.gene060812:intron | 35.0% | |
| ATTGCTATGATACTCGCAAT+GGG | - | chr8.1:11427900-11427919 | MS.gene060812:intron | 35.0% | |
| CAGAGTTAAAGCAAGCAATA+AGG | + | chr8.1:11428162-11428181 | None:intergenic | 35.0% | |
| CATCCTGTTGTTGACATAAT+CGG | + | chr8.1:11426562-11426581 | None:intergenic | 35.0% | |
| CCAATTGAGATGTAAGAAGA+CGG | + | chr8.1:11427651-11427670 | None:intergenic | 35.0% | |
| CCAGAATGCATTGAATTTCT+GGG | - | chr8.1:11426067-11426086 | MS.gene060812:CDS | 35.0% | |
| CTAACTAGGATATTATCGTG+AGG | - | chr8.1:11425570-11425589 | MS.gene060812:intron | 35.0% | |
| CTCACGATAATATCCTAGTT+AGG | + | chr8.1:11425572-11425591 | None:intergenic | 35.0% | |
| CTTTAACAGCAAAGTTGAAG+CGG | - | chr8.1:11427063-11427082 | MS.gene060812:intron | 35.0% | |
| GACTCAAATGGAATAAAGGA+GGG | - | chr8.1:11428611-11428630 | MS.gene060812:CDS | 35.0% | |
| GATAAGATGTCAGACTCAAA+TGG | - | chr8.1:11428599-11428618 | MS.gene060812:CDS | 35.0% | |
| GTCAGACTCAAATGGAATAA+AGG | - | chr8.1:11428607-11428626 | MS.gene060812:CDS | 35.0% | |
| GTGAGAGAGAATTGGAATTA+GGG | + | chr8.1:11424109-11424128 | None:intergenic | 35.0% | |
| TACCTTTATACCATCCACTT+TGG | + | chr8.1:11425803-11425822 | None:intergenic | 35.0% | |
| TCACTTATGATGAAGGCTTT+GGG | - | chr8.1:11427874-11427893 | MS.gene060812:intron | 35.0% | |
| TCTCCTTCGATGATTTCATT+CGG | - | chr8.1:11424162-11424181 | MS.gene060812:intron | 35.0% | |
| TGAGGTGATTATGATTGTGT+GGG | - | chr8.1:11425227-11425246 | MS.gene060812:intron | 35.0% | |
| TGGAACATTAGATGATGTCT+GGG | - | chr8.1:11426604-11426623 | MS.gene060812:intron | 35.0% | |
| TGGAATGTGCAATGATAAGT+TGG | + | chr8.1:11426195-11426214 | None:intergenic | 35.0% | |
| TGTCATGTAGACATAGAGAT+AGG | - | chr8.1:11427421-11427440 | MS.gene060812:intron | 35.0% | |
| TTCACTTATGATGAAGGCTT+TGG | - | chr8.1:11427873-11427892 | MS.gene060812:intron | 35.0% | |
| TTCATCATCTTCTCTTCATC+AGG | - | chr8.1:11424213-11424232 | MS.gene060812:CDS | 35.0% | |
| ! | AAACAGGTTTTCATGGAATG+GGG | + | chr8.1:11425410-11425429 | None:intergenic | 35.0% |
| ! | AATGCATTGAATTTCTGGGA+AGG | - | chr8.1:11426071-11426090 | MS.gene060812:CDS | 35.0% |
| ! | ATTAGACTCTTAGAGCATCA+TGG | - | chr8.1:11425469-11425488 | MS.gene060812:intron | 35.0% |
| ! | CAAAACAGGTTTTCATGGAA+TGG | + | chr8.1:11425412-11425431 | None:intergenic | 35.0% |
| ! | CAGGATCAATCTAGAATTGA+CGG | - | chr8.1:11426947-11426966 | MS.gene060812:intron | 35.0% |
| ! | GATGATTTCATTCGGTTTTG+TGG | - | chr8.1:11424170-11424189 | MS.gene060812:intron | 35.0% |
| ! | TAATGGACATGAACAGATTG+TGG | - | chr8.1:11427615-11427634 | MS.gene060812:CDS | 35.0% |
| ! | TTAGACTCTTAGAGCATCAT+GGG | - | chr8.1:11425470-11425489 | MS.gene060812:intron | 35.0% |
| ! | TTCACTGTATGTCTCTAGAA+GGG | - | chr8.1:11426990-11427009 | MS.gene060812:intron | 35.0% |
| ! | TTCTAAAAAACAAGGAAGGG+CGG | - | chr8.1:11426301-11426320 | MS.gene060812:intron | 35.0% |
| ! | TTTGCTGTGTAATTAACACG+GGG | - | chr8.1:11427368-11427387 | MS.gene060812:intron | 35.0% |
| !! | AAAAAGCTTCTCTGAAATCG+TGG | - | chr8.1:11427100-11427119 | MS.gene060812:intron | 35.0% |
| !! | AGGTAAGTAATAACGGGTTT+GGG | - | chr8.1:11424433-11424452 | MS.gene060812:CDS | 35.0% |
| !! | ATTGTGTGGGTTGATGTTTA+TGG | - | chr8.1:11425240-11425259 | MS.gene060812:intron | 35.0% |
| !! | ATTTAGGGTTTTCTTGGGAT+TGG | + | chr8.1:11424031-11424050 | None:intergenic | 35.0% |
| !! | CAACTTAGTTTGCAGCTTAT+AGG | - | chr8.1:11424513-11424532 | MS.gene060812:intron | 35.0% |
| !! | CTGTGAATTTAGGGTTTTCT+TGG | + | chr8.1:11424037-11424056 | None:intergenic | 35.0% |
| !! | GTTTGCTGTGTAATTAACAC+GGG | - | chr8.1:11427367-11427386 | MS.gene060812:intron | 35.0% |
| !! | TTTAGGGTTTTCTTGGGATT+GGG | + | chr8.1:11424030-11424049 | None:intergenic | 35.0% |
| !! | TTTGATTTGGTAGGAACGAT+GGG | - | chr8.1:11424313-11424332 | MS.gene060812:intron | 35.0% |
| !!! | ACACTTTTTAAGTCCCAAAG+TGG | - | chr8.1:11425786-11425805 | MS.gene060812:CDS | 35.0% |
| !!! | TTTTGATTTGGTAGGAACGA+TGG | - | chr8.1:11424312-11424331 | MS.gene060812:intron | 35.0% |
| !!! | TTTTTAAGTCCCAAAGTGGA+TGG | - | chr8.1:11425790-11425809 | MS.gene060812:CDS | 35.0% |
| AAAACAGAAAGTCTGGTCGA+AGG | - | chr8.1:11428684-11428703 | MS.gene060812:CDS | 40.0% | |
| AAGAAGCAGAAGAGAGGTAA+TGG | - | chr8.1:11428259-11428278 | MS.gene060812:CDS | 40.0% | |
| AAGGACATGCTATTCAGCAT+TGG | - | chr8.1:11426837-11426856 | MS.gene060812:intron | 40.0% | |
| AAGTTGTTACCTTGACCATG+AGG | + | chr8.1:11426162-11426181 | None:intergenic | 40.0% | |
| AGAATTGGAATTAGGGAGAG+AGG | + | chr8.1:11424102-11424121 | None:intergenic | 40.0% | |
| ATACCTGTTCCTCCAAATCA+AGG | + | chr8.1:11428456-11428475 | None:intergenic | 40.0% | |
| ATGAGCTTCCGATTAACCTA+AGG | + | chr8.1:11428207-11428226 | None:intergenic | 40.0% | |
| ATGGCCTAATGTCACACATT+TGG | - | chr8.1:11427518-11427537 | MS.gene060812:intron | 40.0% | |
| ATTGATCCTGATTCAGTCGA+TGG | + | chr8.1:11426937-11426956 | None:intergenic | 40.0% | |
| ATTTGTGGATTTGTCGGATG+TGG | - | chr8.1:11426635-11426654 | MS.gene060812:intron | 40.0% | |
| CAGGGAAGACTTTAATGCTA+TGG | - | chr8.1:11426790-11426809 | MS.gene060812:intron | 40.0% | |
| CATTCTGCCCTTAGGTTAAT+CGG | - | chr8.1:11428196-11428215 | MS.gene060812:intron | 40.0% | |
| CATTGAAGTCGATGAATGAG+AGG | - | chr8.1:11428428-11428447 | MS.gene060812:intron | 40.0% | |
| CCAGTTGACATTCAAGAAAC+TGG | + | chr8.1:11427811-11427830 | None:intergenic | 40.0% | |
| CCAGTTTCTTGAATGTCAAC+TGG | - | chr8.1:11427808-11427827 | MS.gene060812:intron | 40.0% | |
| CCCAGAAATTCAATGCATTC+TGG | + | chr8.1:11426070-11426089 | None:intergenic | 40.0% | |
| CCGTCTTCTTACATCTCAAT+TGG | - | chr8.1:11427648-11427667 | MS.gene060812:intron | 40.0% | |
| CCTGCTGAGGTAAGTAATAA+CGG | - | chr8.1:11424426-11424445 | MS.gene060812:CDS | 40.0% | |
| CTATGTCTACATGACAGTAC+AGG | + | chr8.1:11427417-11427436 | None:intergenic | 40.0% | |
| CTCTGCGTTCTGTGAATTTA+GGG | + | chr8.1:11424046-11424065 | None:intergenic | 40.0% | |
| CTGAGGTGATTATGATTGTG+TGG | - | chr8.1:11425226-11425245 | MS.gene060812:intron | 40.0% | |
| CTGCTGAGGTAAGTAATAAC+GGG | - | chr8.1:11424427-11424446 | MS.gene060812:CDS | 40.0% | |
| GATGAAGACGATCAAGATAG+TGG | + | chr8.1:11424199-11424218 | None:intergenic | 40.0% | |
| GCCAGAATGCATTGAATTTC+TGG | - | chr8.1:11426066-11426085 | MS.gene060812:CDS | 40.0% | |
| GCTCATGAGCTTAATATCCT+AGG | + | chr8.1:11425939-11425958 | None:intergenic | 40.0% | |
| GGTGAGAGAGAATTGGAATT+AGG | + | chr8.1:11424110-11424129 | None:intergenic | 40.0% | |
| GTCTGGGTTTGTATGATTTG+TGG | - | chr8.1:11426620-11426639 | MS.gene060812:intron | 40.0% | |
| GTGGAACATTAGATGATGTC+TGG | - | chr8.1:11426603-11426622 | MS.gene060812:intron | 40.0% | |
| GTTCACTGTATGTCTCTAGA+AGG | - | chr8.1:11426989-11427008 | MS.gene060812:intron | 40.0% | |
| TCCCAAAGTGGATGGTATAA+AGG | - | chr8.1:11425798-11425817 | MS.gene060812:CDS | 40.0% | |
| TGAAGACGATCAAGATAGTG+GGG | + | chr8.1:11424197-11424216 | None:intergenic | 40.0% | |
| TGAGCTTCCGATTAACCTAA+GGG | + | chr8.1:11428206-11428225 | None:intergenic | 40.0% | |
| TGCGTATTCCACTTGTATCA+GGG | + | chr8.1:11425311-11425330 | None:intergenic | 40.0% | |
| TGTTTACACATCACGTGTGA+CGG | + | chr8.1:11427491-11427510 | None:intergenic | 40.0% | |
| TTCACATTCCGAGTATTCCA+CGG | + | chr8.1:11425066-11425085 | None:intergenic | 40.0% | |
| TTTGCTTTCCGTGGAATACT+CGG | - | chr8.1:11425055-11425074 | MS.gene060812:intron | 40.0% | |
| ! | CTTAGAGCATCATGGGTATT+AGG | - | chr8.1:11425477-11425496 | MS.gene060812:intron | 40.0% |
| ! | TCACTGTATGTCTCTAGAAG+GGG | - | chr8.1:11426991-11427010 | MS.gene060812:intron | 40.0% |
| ! | TCGTGACAAGGTATTCGAAT+TGG | + | chr8.1:11426101-11426120 | None:intergenic | 40.0% |
| ! | TTATGTCCATCGACTGAATC+AGG | - | chr8.1:11426928-11426947 | MS.gene060812:intron | 40.0% |
| ! | TTTCAAGTGAAGTCGTGACA+AGG | + | chr8.1:11426113-11426132 | None:intergenic | 40.0% |
| !! | GAGGTAAGTAATAACGGGTT+TGG | - | chr8.1:11424432-11424451 | MS.gene060812:CDS | 40.0% |
| !! | TCTCTGAAATCGTGGAGTTA+GGG | - | chr8.1:11427108-11427127 | MS.gene060812:intron | 40.0% |
| !! | TTCTCTGAAATCGTGGAGTT+AGG | - | chr8.1:11427107-11427126 | MS.gene060812:intron | 40.0% |
| !!! | CTGTTTTTCTTGCTGTTTCC+AGG | + | chr8.1:11428671-11428690 | None:intergenic | 40.0% |
| !!! | GGTTTTATTGGTAATGCACG+TGG | - | chr8.1:11426471-11426490 | MS.gene060812:intron | 40.0% |
| AAAAGATGCAACATGGGCGA+TGG | - | chr8.1:11425883-11425902 | MS.gene060812:intron | 45.0% | |
| AAAGATGCAACATGGGCGAT+GGG | - | chr8.1:11425884-11425903 | MS.gene060812:intron | 45.0% | |
| AAATCATACCACAGGTGCAC+AGG | + | chr8.1:11427346-11427365 | None:intergenic | 45.0% | |
| ACAAGGAAGGGCGGAAATTA+AGG | - | chr8.1:11426310-11426329 | MS.gene060812:intron | 45.0% | |
| ACATGGGCGATGGGAAAAAA+TGG | - | chr8.1:11425893-11425912 | MS.gene060812:intron | 45.0% | |
| ACCAAGATCCAAGCAAACAG+AGG | + | chr8.1:11425178-11425197 | None:intergenic | 45.0% | |
| AGACACTTCATTCTGCCCTT+AGG | - | chr8.1:11428188-11428207 | MS.gene060812:intron | 45.0% | |
| AGCGACAAGCTCACTTTAAG+TGG | - | chr8.1:11427238-11427257 | MS.gene060812:intron | 45.0% | |
| ATTTCTGTACAACCAGCTGG+AGG | + | chr8.1:11425104-11425123 | None:intergenic | 45.0% | |
| ATTTGGTAGGAACGATGGGA+TGG | - | chr8.1:11424317-11424336 | MS.gene060812:intron | 45.0% | |
| CCAAGATCCAAGCAAACAGA+GGG | + | chr8.1:11425177-11425196 | None:intergenic | 45.0% | |
| CCGTTATTACTTACCTCAGC+AGG | + | chr8.1:11424429-11424448 | None:intergenic | 45.0% | |
| CCTAAATTCACAGAACGCAG+AGG | - | chr8.1:11424044-11424063 | MS.gene060812:CDS | 45.0% | |
| CCTCTGCGTTCTGTGAATTT+AGG | + | chr8.1:11424047-11424066 | None:intergenic | 45.0% | |
| CGCTGTCTTCAATTTCTCTG+AGG | - | chr8.1:11425209-11425228 | MS.gene060812:intron | 45.0% | |
| CGGAATGTGAAGAAGTTGCT+GGG | - | chr8.1:11425075-11425094 | MS.gene060812:intron | 45.0% | |
| CTTCTCCACTGCTTCAGATA+CGG | + | chr8.1:11428044-11428063 | None:intergenic | 45.0% | |
| GAATGAGAGGGTCCTTGATT+TGG | - | chr8.1:11428441-11428460 | MS.gene060812:CDS | 45.0% | |
| GAGAAGAGGTGAGAGAGAAT+TGG | + | chr8.1:11424117-11424136 | None:intergenic | 45.0% | |
| GTGCGTATTCCACTTGTATC+AGG | + | chr8.1:11425312-11425331 | None:intergenic | 45.0% | |
| GTGGACATATTTGTCTTGCC+AGG | - | chr8.1:11425374-11425393 | MS.gene060812:intron | 45.0% | |
| TAGAATTGACGGCAAGTCGA+AGG | - | chr8.1:11426958-11426977 | MS.gene060812:intron | 45.0% | |
| TCGGAATGTGAAGAAGTTGC+TGG | - | chr8.1:11425074-11425093 | MS.gene060812:intron | 45.0% | |
| TGAAACTCACCCAAGCAAAC+TGG | + | chr8.1:11425137-11425156 | None:intergenic | 45.0% | |
| TGTTACCTTGACCATGAGGA+GGG | + | chr8.1:11426158-11426177 | None:intergenic | 45.0% | |
| TGTTTGAATCCCAGAGAGAC+TGG | - | chr8.1:11425284-11425303 | MS.gene060812:intron | 45.0% | |
| TTGAAGCGGTATGTTTCTCG+TGG | - | chr8.1:11427077-11427096 | MS.gene060812:intron | 45.0% | |
| TTGTTACCTTGACCATGAGG+AGG | + | chr8.1:11426159-11426178 | None:intergenic | 45.0% | |
| ! | AACACGGGGCTTTATGCATA+AGG | - | chr8.1:11427382-11427401 | MS.gene060812:intron | 45.0% |
| ! | ACCAACATGTCCAGTTTGCT+TGG | - | chr8.1:11425124-11425143 | MS.gene060812:intron | 45.0% |
| ! | CAAGAAGTTTTCTCCTGCTG+AGG | - | chr8.1:11424413-11424432 | MS.gene060812:CDS | 45.0% |
| ! | CCAACATGTCCAGTTTGCTT+GGG | - | chr8.1:11425125-11425144 | MS.gene060812:intron | 45.0% |
| ! | CTGCCGATTATGTCAACAAC+AGG | - | chr8.1:11426556-11426575 | MS.gene060812:intron | 45.0% |
| ! | GGTATTTCTGTACAACCAGC+TGG | + | chr8.1:11425107-11425126 | None:intergenic | 45.0% |
| ! | TGCTTCGCTAACAAAAGCAC+TGG | - | chr8.1:11426450-11426469 | MS.gene060812:intron | 45.0% |
| !! | ATGTCCACTTTGAGACGCAA+GGG | + | chr8.1:11425362-11425381 | None:intergenic | 45.0% |
| !! | CGCAAGGGCATTGAAATGAA+TGG | + | chr8.1:11425347-11425366 | None:intergenic | 45.0% |
| !! | TATGTCCACTTTGAGACGCA+AGG | + | chr8.1:11425363-11425382 | None:intergenic | 45.0% |
| !! | TTCTTGCTGTTTCCAGGAGA+AGG | + | chr8.1:11428665-11428684 | None:intergenic | 45.0% |
| AACAAAAGCCTGTGCACCTG+TGG | - | chr8.1:11427335-11427354 | MS.gene060812:CDS | 50.0% | |
| AAGATGAGTTCGGGATCGAG+TGG | + | chr8.1:11423996-11424015 | None:intergenic | 50.0% | |
| AATGCCCTTGCGTCTCAAAG+TGG | - | chr8.1:11425355-11425374 | MS.gene060812:intron | 50.0% | |
| ACAGAAAGTCTGGTCGAAGG+CGG | - | chr8.1:11428687-11428706 | MS.gene060812:CDS | 50.0% | |
| ACAGCGAGGATGAAGAGAAG+AGG | + | chr8.1:11424131-11424150 | None:intergenic | 50.0% | |
| AGACTGGACCCTGATACAAG+TGG | - | chr8.1:11425300-11425319 | MS.gene060812:intron | 50.0% | |
| ATCGTGACCCTCTGTTTGCT+TGG | - | chr8.1:11425167-11425186 | MS.gene060812:intron | 50.0% | |
| CCCAAGCAAACTGGACATGT+TGG | + | chr8.1:11425128-11425147 | None:intergenic | 50.0% | |
| CCCTCTGTTTGCTTGGATCT+TGG | - | chr8.1:11425174-11425193 | MS.gene060812:intron | 50.0% | |
| GAATGGGGAAGCTACATACC+TGG | + | chr8.1:11425395-11425414 | None:intergenic | 50.0% | |
| GGAACGATGGGATGGAAGAT+AGG | - | chr8.1:11424325-11424344 | MS.gene060812:intron | 50.0% | |
| GTGGATTTGTCGGATGTGGA+AGG | - | chr8.1:11426639-11426658 | MS.gene060812:intron | 50.0% | |
| GTTACCTTGACCATGAGGAG+GGG | + | chr8.1:11426157-11426176 | None:intergenic | 50.0% | |
| TATCAGGGTCCAGTCTCTCT+GGG | + | chr8.1:11425296-11425315 | None:intergenic | 50.0% | |
| TGGAGCGGAGAAGATGAGTT+CGG | + | chr8.1:11424006-11424025 | None:intergenic | 50.0% | |
| TTACCTTGACCATGAGGAGG+GGG | + | chr8.1:11426156-11426175 | None:intergenic | 50.0% | |
| ! | AAGCTCCGTATCTGAAGCAG+TGG | - | chr8.1:11428036-11428055 | MS.gene060812:intron | 50.0% |
| ! | CGTATCTGAAGCAGTGGAGA+AGG | - | chr8.1:11428042-11428061 | MS.gene060812:intron | 50.0% |
| ! | GGGTTTTCTTGGGATTGGGT+TGG | + | chr8.1:11424026-11424045 | None:intergenic | 50.0% |
| !! | GGTCCTTGATTTGGAGGAAC+AGG | - | chr8.1:11428450-11428469 | MS.gene060812:CDS | 50.0% |
| !! | TCAATGCATTCTGGCTCGCT+TGG | + | chr8.1:11426061-11426080 | None:intergenic | 50.0% |
| !! | TGAGAGGGTCCTTGATTTGG+AGG | - | chr8.1:11428444-11428463 | MS.gene060812:CDS | 50.0% |
| !! | TTCTTGGGATTGGGTTGGAG+CGG | + | chr8.1:11424021-11424040 | None:intergenic | 50.0% |
| GAAGGTTGCTCATGAGCCAC+TGG | + | chr8.1:11428647-11428666 | None:intergenic | 55.0% | |
| GCTCATGAGCAACCTTCTCC+TGG | - | chr8.1:11428650-11428669 | MS.gene060812:CDS | 55.0% | |
| GGAGCGGAGAAGATGAGTTC+GGG | + | chr8.1:11424005-11424024 | None:intergenic | 55.0% | |
| GGAGGGAACAGTCTTACCAG+TGG | - | chr8.1:11428628-11428647 | MS.gene060812:CDS | 55.0% | |
| GTATCAGGGTCCAGTCTCTC+TGG | + | chr8.1:11425297-11425316 | None:intergenic | 55.0% | |
| GTGGAGAAGGCTGCAACTTC+TGG | - | chr8.1:11428055-11428074 | MS.gene060812:intron | 55.0% | |
| TACCTTGACCATGAGGAGGG+GGG | + | chr8.1:11426155-11426174 | None:intergenic | 55.0% | |
| ! | GAGAGGAGTGTGAAGCGCTT+CGG | + | chr8.1:11424085-11424104 | None:intergenic | 55.0% |
| ! | GATTCTCGTCGTCGACTGAG+TGG | + | chr8.1:11423974-11423993 | None:intergenic | 55.0% |
| GGCTGCAACTTCTGGCATGC+TGG | - | chr8.1:11428063-11428082 | MS.gene060812:intron | 60.0% | |
| ! | CGTCGTCGACTGAGTGGACT+CGG | + | chr8.1:11423968-11423987 | None:intergenic | 60.0% |
| CACCCCCCTCCTCATGGTCA+AGG | - | chr8.1:11426150-11426169 | MS.gene060812:intron | 65.0% | |
| CCTTTGCACCCCCCTCCTCA+TGG | - | chr8.1:11426144-11426163 | MS.gene060812:intron | 65.0% | |
| GTCTGGTCGAAGGCGGCGTT+AGG | - | chr8.1:11428694-11428713 | MS.gene060812:CDS | 65.0% | |
| GTTGCTGGGACTCCTCCAGC+TGG | - | chr8.1:11425089-11425108 | MS.gene060812:intron | 65.0% | |
| ! | AGGAGGGGGGTGCAAAGGCA+AGG | + | chr8.1:11426142-11426161 | None:intergenic | 65.0% |
| ! | CCATGAGGAGGGGGGTGCAA+AGG | + | chr8.1:11426147-11426166 | None:intergenic | 65.0% |
| ! | CGTCGACTGAGTGGACTCGG+AGG | + | chr8.1:11423965-11423984 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 11423954 | 11428715 | 11423954 | ID=MS.gene060812 |
| chr8.1 | mRNA | 11423954 | 11428715 | 11423954 | ID=MS.gene060812.t1;Parent=MS.gene060812 |
| chr8.1 | exon | 11428435 | 11428715 | 11428435 | ID=MS.gene060812.t1.exon1;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11428435 | 11428715 | 11428435 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11428235 | 11428343 | 11428235 | ID=MS.gene060812.t1.exon2;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11428235 | 11428343 | 11428235 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11427523 | 11427637 | 11427523 | ID=MS.gene060812.t1.exon3;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11427523 | 11427637 | 11427523 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11427274 | 11427371 | 11427274 | ID=MS.gene060812.t1.exon4;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11427274 | 11427371 | 11427274 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11426009 | 11426115 | 11426009 | ID=MS.gene060812.t1.exon5;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11426009 | 11426115 | 11426009 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11425585 | 11425840 | 11425585 | ID=MS.gene060812.t1.exon6;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11425585 | 11425840 | 11425585 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11424985 | 11425038 | 11424985 | ID=MS.gene060812.t1.exon7;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11424985 | 11425038 | 11424985 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11424531 | 11424674 | 11424531 | ID=MS.gene060812.t1.exon8;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11424531 | 11424674 | 11424531 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11424395 | 11424459 | 11424395 | ID=MS.gene060812.t1.exon9;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11424395 | 11424459 | 11424395 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11424198 | 11424252 | 11424198 | ID=MS.gene060812.t1.exon10;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11424198 | 11424252 | 11424198 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| chr8.1 | exon | 11423954 | 11424112 | 11423954 | ID=MS.gene060812.t1.exon11;Parent=MS.gene060812.t1 |
| chr8.1 | CDS | 11423954 | 11424112 | 11423954 | ID=cds.MS.gene060812.t1;Parent=MS.gene060812.t1 |
| Gene Sequence |
| Protein sequence |
