AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35131

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35131.t1 MTR_4g094588 95.389 347 7 1 1 347 1 338 0.0 683
MS.gene35131.t1 MTR_5g091390 46.416 293 139 8 50 340 28 304 1.24e-53 179
MS.gene35131.t1 MTR_5g043880 51.852 189 76 5 163 347 100 277 1.94e-47 162
MS.gene35131.t1 MTR_1g086790 50.000 190 83 3 163 341 134 322 4.54e-47 162
MS.gene35131.t1 MTR_7g109800 50.556 180 79 6 163 340 121 292 1.27e-43 152
MS.gene35131.t1 MTR_2g033820 68.817 93 29 0 170 262 186 278 3.88e-41 148
MS.gene35131.t1 MTR_8g007270 62.921 89 33 0 155 243 122 210 3.79e-33 123
MS.gene35131.t1 MTR_7g079010 48.227 141 65 3 105 245 67 199 1.81e-32 121
MS.gene35131.t1 MTR_5g042920 44.444 153 72 3 127 269 259 408 2.64e-32 125
MS.gene35131.t1 MTR_5g042920 60.000 60 23 1 187 246 151 209 1.87e-16 80.5
MS.gene35131.t1 MTR_4g122530 43.678 174 71 5 171 342 192 340 4.20e-32 124
MS.gene35131.t1 MTR_3g095080 47.518 141 67 2 105 243 65 200 9.13e-32 119
MS.gene35131.t1 MTR_3g095080 47.518 141 67 2 105 243 89 224 1.08e-31 119
MS.gene35131.t1 MTR_3g104750 64.198 81 28 1 165 244 81 161 3.76e-31 115
MS.gene35131.t1 MTR_3g056100 60.215 93 36 1 168 260 252 343 1.84e-30 120
MS.gene35131.t1 MTR_3g056100 48.101 79 35 2 187 265 99 171 1.81e-15 77.4
MS.gene35131.t1 MTR_4g082580 37.989 179 95 3 73 248 174 339 1.85e-30 119
MS.gene35131.t1 MTR_3g056100 60.215 93 36 1 168 260 239 330 1.85e-30 120
MS.gene35131.t1 MTR_3g056100 48.101 79 35 2 187 265 99 171 2.18e-15 77.0
MS.gene35131.t1 MTR_7g011820 45.385 130 49 1 141 248 342 471 2.07e-30 121
MS.gene35131.t1 MTR_7g011820 48.889 90 30 2 172 246 198 286 3.83e-16 79.7
MS.gene35131.t1 MTR_8g092140 68.919 74 22 1 171 243 143 216 4.71e-30 115
MS.gene35131.t1 MTR_3g056100 60.215 93 36 1 168 260 383 474 5.25e-30 120
MS.gene35131.t1 MTR_3g056100 48.101 79 35 2 187 265 243 315 2.75e-15 77.4
MS.gene35131.t1 MTR_3g056100 60.215 93 36 1 168 260 396 487 5.63e-30 120
MS.gene35131.t1 MTR_3g056100 48.101 79 35 2 187 265 243 315 2.55e-15 77.4
MS.gene35131.t1 MTR_4g013260 43.506 154 81 3 99 246 242 395 8.98e-30 119
MS.gene35131.t1 MTR_4g013260 52.632 76 34 1 187 260 184 259 1.26e-18 87.0
MS.gene35131.t1 MTR_3g095040 47.619 105 42 1 173 277 104 195 1.32e-29 113
MS.gene35131.t1 MTR_8g092010 48.214 112 51 2 139 246 59 167 1.62e-29 112
MS.gene35131.t1 MTR_5g094430 60.494 81 32 0 168 248 211 291 1.68e-29 117
MS.gene35131.t1 MTR_5g094430 59.322 59 23 1 188 246 67 124 2.42e-15 77.0
MS.gene35131.t1 MTR_5g094430 60.494 81 32 0 168 248 233 313 2.06e-29 117
MS.gene35131.t1 MTR_5g094430 59.322 59 23 1 188 246 89 146 2.11e-15 77.4
MS.gene35131.t1 MTR_1g015140 63.636 77 28 0 168 244 83 159 2.16e-29 111
MS.gene35131.t1 MTR_7g028415 66.197 71 24 0 175 245 81 151 2.95e-29 111
MS.gene35131.t1 MTR_7g028710 66.197 71 24 0 175 245 81 151 2.95e-29 111
MS.gene35131.t1 MTR_5g094430 60.494 81 32 0 168 248 345 425 5.31e-29 117
MS.gene35131.t1 MTR_5g094430 59.322 59 23 1 188 246 201 258 3.30e-15 77.0
MS.gene35131.t1 MTR_3g009470 64.103 78 28 0 171 248 479 556 6.76e-29 117
MS.gene35131.t1 MTR_3g009470 64.062 64 22 1 187 250 280 342 5.63e-19 88.6
MS.gene35131.t1 MTR_5g074400 45.185 135 55 3 125 254 366 486 7.53e-29 117
MS.gene35131.t1 MTR_5g074400 61.667 60 22 1 187 246 243 301 5.30e-16 79.3
MS.gene35131.t1 MTR_7g071120 36.898 187 96 4 99 268 223 404 2.03e-28 115
MS.gene35131.t1 MTR_7g071120 56.522 69 29 1 182 250 161 228 6.82e-17 82.0
MS.gene35131.t1 MTR_1g077780 53.659 82 38 0 168 249 43 124 2.19e-28 108
MS.gene35131.t1 MTR_3g053330 35.000 200 107 5 156 345 220 406 5.19e-27 111
MS.gene35131.t1 MTR_3g031220 57.317 82 35 0 166 247 344 425 1.10e-26 110
MS.gene35131.t1 MTR_3g031220 40.179 112 61 3 170 280 185 291 2.08e-16 80.5
MS.gene35131.t1 MTR_7g080020 54.118 85 39 0 168 252 474 558 2.53e-26 110
MS.gene35131.t1 MTR_7g080020 54.762 84 33 2 167 250 264 342 4.31e-18 85.9
MS.gene35131.t1 MTR_8g096730 50.588 85 42 0 164 248 47 131 7.90e-26 101
MS.gene35131.t1 MTR_7g100510 43.165 139 59 4 113 246 297 420 8.45e-26 107
MS.gene35131.t1 MTR_7g100510 55.882 68 29 1 188 255 190 256 1.94e-16 80.5
MS.gene35131.t1 MTR_7g080000 53.659 82 38 0 167 248 412 493 2.25e-25 107
MS.gene35131.t1 MTR_7g080000 51.190 84 36 2 167 250 218 296 1.01e-16 81.6
MS.gene35131.t1 MTR_2g023930 46.739 92 48 1 156 246 274 365 6.54e-24 102
MS.gene35131.t1 MTR_4g132430 45.652 92 49 1 156 246 96 187 9.07e-24 100
MS.gene35131.t1 MTR_5g097490 50.000 108 50 2 155 259 220 326 2.45e-23 100
MS.gene35131.t1 MTR_5g097490 51.515 66 23 2 187 248 92 152 2.16e-12 67.8
MS.gene35131.t1 MTR_7g062220 71.930 57 16 0 187 243 124 180 3.48e-23 98.6
MS.gene35131.t1 MTR_4g132430 45.652 92 49 1 156 246 230 321 3.76e-23 100
MS.gene35131.t1 MTR_7g110720 42.149 121 64 4 137 253 138 256 1.18e-22 98.2
MS.gene35131.t1 MTR_7g110720 53.247 77 35 1 171 246 200 276 1.73e-22 98.2
MS.gene35131.t1 MTR_1g009613 40.952 105 59 2 156 257 229 333 2.09e-22 96.7
MS.gene35131.t1 MTR_2g105060 51.220 82 37 2 169 247 74 155 3.86e-22 94.0
MS.gene35131.t1 MTR_2g105060 51.220 82 37 2 169 247 149 230 6.99e-22 94.7
MS.gene35131.t1 MTR_6g086555 41.129 124 49 4 173 273 192 314 9.07e-22 95.9
MS.gene35131.t1 MTR_4g130900 42.991 107 59 1 147 251 319 425 2.78e-21 95.1
MS.gene35131.t1 MTR_2g088000 46.429 84 44 1 164 246 326 409 4.28e-21 94.7
MS.gene35131.t1 MTR_2g045360 36.641 131 73 3 158 281 182 309 7.36e-21 93.2
MS.gene35131.t1 MTR_4g049760 39.837 123 72 2 147 267 250 372 1.17e-20 93.2
MS.gene35131.t1 MTR_4g094412 47.436 78 40 1 171 247 218 295 2.69e-20 92.0
MS.gene35131.t1 MTR_4g094412 47.436 78 40 1 171 247 227 304 2.92e-20 92.0
MS.gene35131.t1 MTR_8g098945 50.617 81 38 2 186 265 128 207 4.63e-20 89.0
MS.gene35131.t1 MTR_4g107970 40.404 99 58 1 149 246 140 238 7.88e-20 90.9
MS.gene35131.t1 MTR_7g009730 42.609 115 57 3 147 256 175 285 7.99e-20 90.9
MS.gene35131.t1 MTR_5g016610 41.053 95 55 1 150 243 162 256 1.13e-19 87.8
MS.gene35131.t1 MTR_7g109600 60.317 63 24 1 188 249 54 116 1.25e-19 87.4
MS.gene35131.t1 MTR_4g107970 40.404 99 58 1 149 246 217 315 1.37e-19 90.1
MS.gene35131.t1 MTR_4g049790 37.500 128 77 2 154 280 281 406 3.13e-19 89.0
MS.gene35131.t1 MTR_2g032030 43.878 98 52 2 153 247 231 328 4.06e-19 88.2
MS.gene35131.t1 MTR_2g032030 43.878 98 52 2 153 247 231 328 5.25e-19 88.2
MS.gene35131.t1 MTR_1g013760 57.895 57 23 1 188 243 141 197 5.90e-19 85.9
MS.gene35131.t1 MTR_3g009470 57.534 73 30 1 187 259 280 351 6.61e-19 88.2
MS.gene35131.t1 MTR_7g079040 59.016 61 24 1 188 247 155 215 7.51e-19 86.3
MS.gene35131.t1 MTR_2g016770 56.667 60 25 1 188 246 36 95 7.74e-19 84.3
MS.gene35131.t1 MTR_2g016770 56.667 60 25 1 188 246 28 87 1.02e-18 83.6
MS.gene35131.t1 MTR_8g028565 55.072 69 27 2 188 252 156 224 1.16e-18 85.9
MS.gene35131.t1 MTR_8g087000 58.065 62 25 1 188 248 77 138 1.46e-18 84.0
MS.gene35131.t1 MTR_8g087000 58.065 62 25 1 188 248 78 139 1.47e-18 84.3
MS.gene35131.t1 MTR_4g007060 51.613 62 29 1 186 246 127 188 4.58e-18 83.6
MS.gene35131.t1 MTR_4g007060 51.613 62 29 1 186 246 161 222 6.40e-18 83.6
MS.gene35131.t1 MTR_4g127040 39.560 91 54 1 154 243 212 302 6.59e-18 83.6
MS.gene35131.t1 MTR_5g029850 82.500 40 7 0 165 204 29 68 7.64e-18 77.4
MS.gene35131.t1 MTR_3g106060 54.237 59 26 1 186 243 137 195 8.82e-18 82.8
MS.gene35131.t1 MTR_3g108960 41.463 82 47 1 163 243 290 371 1.25e-17 83.6
MS.gene35131.t1 MTR_2g083870 56.667 60 25 1 188 246 81 140 2.86e-17 80.9
MS.gene35131.t1 MTR_1g070455 54.839 62 26 2 188 247 294 355 3.24e-17 82.0
MS.gene35131.t1 MTR_1g078260 47.887 71 36 1 174 243 234 304 4.76e-17 82.4
MS.gene35131.t1 MTR_3g031220 40.179 112 61 3 170 280 185 291 1.16e-16 80.9
MS.gene35131.t1 MTR_4g094908 40.244 82 48 1 163 243 242 323 1.55e-16 79.7
MS.gene35131.t1 MTR_2g024350 52.239 67 30 2 184 248 4 70 1.77e-16 77.8
MS.gene35131.t1 MTR_1g099600 46.341 82 42 2 168 247 165 246 4.09e-16 78.2
MS.gene35131.t1 MTR_5g097500 48.684 76 39 0 172 247 215 290 4.91e-16 78.2
MS.gene35131.t1 MTR_1g013790 38.947 95 48 3 186 279 100 185 5.28e-16 77.0
MS.gene35131.t1 MTR_2g024380 44.706 85 44 3 166 247 228 312 5.49e-16 79.0
MS.gene35131.t1 MTR_8g099350 43.000 100 44 3 163 254 103 197 5.73e-16 78.6
MS.gene35131.t1 MTR_4g047580 37.391 115 67 3 137 250 235 345 6.08e-16 79.3
MS.gene35131.t1 MTR_0117s0040 38.298 94 56 2 151 243 39 131 1.03e-15 76.3
MS.gene35131.t1 MTR_2g075610 45.455 77 37 2 186 259 28 102 1.83e-14 71.2
MS.gene35131.t1 MTR_8g067650 38.000 100 60 2 158 255 309 408 3.31e-14 73.9
MS.gene35131.t1 MTR_5g067680 35.252 139 83 3 106 241 125 259 4.03e-14 72.8
MS.gene35131.t1 MTR_8g069935 39.785 93 54 2 156 246 299 391 4.83e-14 73.2
MS.gene35131.t1 MTR_2g075750 43.038 79 40 2 186 261 27 103 5.18e-14 70.1
MS.gene35131.t1 MTR_3g090860 46.377 69 34 1 186 251 132 200 5.92e-14 72.4
MS.gene35131.t1 MTR_8g067635 37.255 102 62 2 156 255 317 418 6.02e-14 73.2
MS.gene35131.t1 MTR_5g074200 49.296 71 33 2 180 248 211 280 2.69e-13 70.1
MS.gene35131.t1 MTR_6g053200 35.780 109 63 4 187 291 330 435 6.55e-13 70.1
MS.gene35131.t1 MTR_7g117200 50.847 59 26 1 186 241 117 175 7.28e-13 68.9
MS.gene35131.t1 MTR_8g027860 32.877 146 72 5 186 318 135 267 9.03e-13 68.9
MS.gene35131.t1 MTR_7g073380 30.935 139 87 4 141 276 78 210 1.08e-12 68.2
MS.gene35131.t1 MTR_7g073430 41.667 84 45 2 161 241 97 179 1.21e-12 67.8
MS.gene35131.t1 MTR_3g095080 38.318 107 59 2 105 209 89 190 2.62e-12 65.5
MS.gene35131.t1 MTR_8g005750 41.000 100 49 4 147 241 66 160 2.62e-12 66.6
MS.gene35131.t1 MTR_2g075700 42.500 80 42 2 165 241 123 201 4.87e-12 66.2
MS.gene35131.t1 MTR_8g032510 40.000 90 45 3 187 267 119 208 6.82e-12 65.9
MS.gene35131.t1 MTR_3g093830 32.414 145 90 4 100 241 45 184 1.06e-11 65.5
MS.gene35131.t1 MTR_5g067700 39.080 87 48 3 186 268 105 190 1.26e-11 64.3
MS.gene35131.t1 MTR_2g075680 34.959 123 61 3 122 241 99 205 1.47e-11 64.7
MS.gene35131.t1 MTR_8g092010 40.506 79 40 2 139 213 59 134 1.48e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35131.t1 AT4G18170 48.544 309 130 12 37 341 31 314 6.25e-67 213
MS.gene35131.t1 AT1G29860 54.706 170 65 3 171 340 120 277 1.03e-54 181
MS.gene35131.t1 AT5G46350 48.374 246 97 8 52 270 36 278 8.74e-53 177
MS.gene35131.t1 AT1G69310 47.312 186 72 3 162 342 122 286 4.82e-45 156
MS.gene35131.t1 AT1G69310 47.312 186 72 3 162 342 122 286 4.82e-45 156
MS.gene35131.t1 AT1G69310 47.312 186 72 3 162 342 122 286 4.82e-45 156
MS.gene35131.t1 AT2G47260 75.000 88 22 0 163 250 150 237 1.51e-42 150
MS.gene35131.t1 AT5G49520 45.652 184 90 2 171 344 205 388 6.20e-42 150
MS.gene35131.t1 AT1G69310 45.161 186 72 4 162 342 122 282 1.95e-39 141
MS.gene35131.t1 AT3G62340 58.763 97 38 1 165 261 96 190 1.18e-34 128
MS.gene35131.t1 AT4G39410 67.857 84 27 0 160 243 196 279 1.38e-34 129
MS.gene35131.t1 AT2G44745 66.279 86 28 1 162 247 120 204 7.17e-34 124
MS.gene35131.t1 AT2G46130 62.500 88 32 1 158 245 2 88 4.54e-32 116
MS.gene35131.t1 AT5G07100 55.914 93 41 0 165 257 119 211 1.11e-31 119
MS.gene35131.t1 AT5G07100 46.479 71 38 0 187 257 24 94 1.77e-14 72.0
MS.gene35131.t1 AT5G07100 55.914 93 41 0 165 257 119 211 1.11e-31 119
MS.gene35131.t1 AT5G07100 46.479 71 38 0 187 257 24 94 1.77e-14 72.0
MS.gene35131.t1 AT5G07100 55.914 93 41 0 165 257 119 211 1.11e-31 119
MS.gene35131.t1 AT5G07100 46.479 71 38 0 187 257 24 94 1.77e-14 72.0
MS.gene35131.t1 AT5G07100 55.914 93 41 0 165 257 119 211 1.11e-31 119
MS.gene35131.t1 AT5G07100 46.479 71 38 0 187 257 24 94 1.77e-14 72.0
MS.gene35131.t1 AT5G07100 48.276 116 52 1 150 257 189 304 2.83e-31 120
MS.gene35131.t1 AT5G07100 46.479 71 38 0 187 257 117 187 2.95e-14 72.8
MS.gene35131.t1 AT1G64000 58.824 85 35 0 161 245 88 172 1.38e-30 115
MS.gene35131.t1 AT2G03340 42.759 145 74 2 113 248 332 476 1.61e-30 121
MS.gene35131.t1 AT2G03340 60.606 66 24 2 187 252 250 313 3.01e-17 83.2
MS.gene35131.t1 AT1G13960 45.522 134 69 1 113 246 186 315 3.11e-30 118
MS.gene35131.t1 AT1G13960 59.701 67 25 2 187 252 76 141 1.07e-16 80.5
MS.gene35131.t1 AT1G13960 45.522 134 69 1 113 246 339 468 3.62e-30 120
MS.gene35131.t1 AT1G13960 59.701 67 25 2 187 252 229 294 7.30e-17 82.0
MS.gene35131.t1 AT5G41570 56.522 92 36 1 158 245 65 156 5.96e-30 113
MS.gene35131.t1 AT5G26170 65.714 70 24 0 174 243 100 169 1.09e-29 112
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 186 266 1.63e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 35 103 1.69e-16 80.1
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 186 266 1.63e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 35 103 1.69e-16 80.1
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 186 266 1.63e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 35 103 1.69e-16 80.1
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 186 266 1.63e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 35 103 1.69e-16 80.1
MS.gene35131.t1 AT3G01080 68.000 75 24 0 172 246 291 365 2.45e-29 117
MS.gene35131.t1 AT3G01080 54.412 68 30 1 187 254 167 233 2.83e-16 79.7
MS.gene35131.t1 AT3G01080 68.000 75 24 0 172 246 329 403 2.46e-29 117
MS.gene35131.t1 AT3G01080 54.412 68 30 1 187 254 205 271 2.19e-16 80.5
MS.gene35131.t1 AT5G13080 64.000 75 27 0 174 248 54 128 2.90e-29 110
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 290 370 6.15e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 139 207 2.61e-16 80.1
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 322 402 6.45e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 171 239 2.79e-16 80.1
MS.gene35131.t1 AT3G01970 63.889 72 26 0 174 245 52 123 6.80e-29 109
MS.gene35131.t1 AT4G26640 62.963 81 30 0 168 248 362 442 7.51e-29 117
MS.gene35131.t1 AT4G26640 54.286 70 31 1 187 256 211 279 2.61e-16 80.5
MS.gene35131.t1 AT2G38470 53.535 99 46 0 168 266 343 441 2.53e-28 115
MS.gene35131.t1 AT2G38470 63.333 60 21 1 187 246 184 242 2.22e-16 80.5
MS.gene35131.t1 AT2G30250 61.446 83 32 0 168 250 309 391 3.26e-28 113
MS.gene35131.t1 AT2G30250 42.857 91 37 3 188 266 167 254 1.53e-13 71.6
MS.gene35131.t1 AT5G56270 62.821 78 29 0 171 248 471 548 6.36e-28 115
MS.gene35131.t1 AT5G56270 65.000 60 20 1 187 246 273 331 5.28e-17 82.8
MS.gene35131.t1 AT2G46130 57.955 88 32 2 158 245 2 84 1.02e-26 102
MS.gene35131.t1 AT5G64810 44.231 104 58 0 153 256 76 179 1.12e-26 105
MS.gene35131.t1 AT4G26440 55.556 81 36 0 168 248 353 433 7.32e-26 108
MS.gene35131.t1 AT4G26440 58.333 60 24 1 187 246 178 236 2.87e-14 74.3
MS.gene35131.t1 AT4G04450 42.241 116 65 2 150 263 160 275 7.55e-25 104
MS.gene35131.t1 AT2G04880 45.536 112 45 1 135 246 247 342 1.77e-24 103
MS.gene35131.t1 AT2G04880 55.738 61 26 1 186 246 110 169 5.29e-14 73.2
MS.gene35131.t1 AT2G04880 45.536 112 45 1 135 246 271 366 1.92e-24 104
MS.gene35131.t1 AT2G04880 53.968 63 28 1 186 248 110 171 5.37e-14 73.2
MS.gene35131.t1 AT4G04450 42.241 116 65 2 150 263 254 369 2.33e-24 104
MS.gene35131.t1 AT2G21900 44.211 95 49 2 159 249 77 171 4.76e-24 98.2
MS.gene35131.t1 AT1G62300 28.947 266 137 8 119 344 237 490 6.92e-24 102
MS.gene35131.t1 AT4G22070 47.126 87 45 1 161 246 271 357 6.73e-23 100
MS.gene35131.t1 AT4G22070 47.126 87 45 1 161 246 271 357 6.73e-23 100
MS.gene35131.t1 AT4G22070 47.126 87 45 1 161 246 271 357 6.73e-23 100
MS.gene35131.t1 AT4G22070 47.126 87 45 1 161 246 271 357 6.73e-23 100
MS.gene35131.t1 AT2G37260 48.485 99 46 2 150 243 227 325 1.49e-22 97.4
MS.gene35131.t1 AT2G37260 54.430 79 34 2 170 247 67 144 1.03e-16 80.5
MS.gene35131.t1 AT2G37260 48.485 99 46 2 150 243 225 323 1.55e-22 97.1
MS.gene35131.t1 AT2G37260 54.430 79 34 2 170 247 65 142 1.12e-16 80.5
MS.gene35131.t1 AT2G37260 48.485 99 46 2 150 243 307 405 1.99e-22 97.8
MS.gene35131.t1 AT2G37260 54.430 79 34 2 170 247 147 224 1.50e-16 80.9
MS.gene35131.t1 AT1G55600 51.899 79 38 0 168 246 288 366 1.72e-21 95.5
MS.gene35131.t1 AT1G68150 44.681 94 51 1 171 263 219 312 2.05e-21 94.4
MS.gene35131.t1 AT1G80840 40.367 109 59 3 150 252 104 212 6.96e-21 91.7
MS.gene35131.t1 AT4G30935 46.237 93 48 1 168 258 312 404 1.75e-20 92.4
MS.gene35131.t1 AT1G18860 49.351 77 38 1 171 246 223 299 2.58e-20 92.4
MS.gene35131.t1 AT2G30590 45.783 83 44 1 163 244 289 371 3.64e-20 90.9
MS.gene35131.t1 AT4G31800 49.296 71 35 1 186 255 110 180 5.59e-20 88.2
MS.gene35131.t1 AT4G01720 49.351 77 38 1 171 246 223 299 7.45e-20 90.9
MS.gene35131.t1 AT4G31800 49.296 71 35 1 186 255 175 245 8.96e-20 89.0
MS.gene35131.t1 AT1G29280 58.333 60 24 1 188 246 75 134 1.47e-19 87.4
MS.gene35131.t1 AT2G23320 34.437 151 84 3 97 245 162 299 1.63e-19 88.2
MS.gene35131.t1 AT4G01250 56.522 69 26 2 188 252 129 197 2.73e-19 87.4
MS.gene35131.t1 AT2G25000 54.839 62 27 1 186 246 102 163 3.06e-19 85.9
MS.gene35131.t1 AT2G25000 54.839 62 27 1 186 246 102 163 3.06e-19 85.9
MS.gene35131.t1 AT2G25000 54.839 62 27 1 186 246 124 185 5.36e-19 85.5
MS.gene35131.t1 AT2G34830 43.878 98 52 2 153 247 179 276 7.05e-19 87.4
MS.gene35131.t1 AT2G34830 43.878 98 52 2 153 247 188 285 7.18e-19 87.8
MS.gene35131.t1 AT2G25000 54.839 62 27 1 186 246 145 206 8.03e-19 85.5
MS.gene35131.t1 AT5G52830 50.602 83 37 2 188 266 166 248 1.24e-18 86.3
MS.gene35131.t1 AT3G58710 52.113 71 33 1 179 248 62 132 1.29e-18 84.7
MS.gene35131.t1 AT3G58710 52.113 71 33 1 179 248 63 133 1.33e-18 84.7
MS.gene35131.t1 AT4G31550 43.902 82 45 1 163 243 221 302 1.47e-18 85.5
MS.gene35131.t1 AT5G43290 63.158 57 21 0 187 243 114 170 1.74e-18 84.7
MS.gene35131.t1 AT5G15130 42.222 90 50 2 161 248 158 247 2.06e-18 86.7
MS.gene35131.t1 AT5G45050 42.268 97 54 2 160 255 1014 1109 2.07e-18 87.0
MS.gene35131.t1 AT5G45050 56.522 69 28 2 188 255 1181 1248 2.08e-18 87.0
MS.gene35131.t1 AT5G45050 56.522 69 28 2 188 255 1153 1220 2.11e-18 87.0
MS.gene35131.t1 AT5G15130 45.570 79 42 1 171 248 211 289 2.19e-18 86.7
MS.gene35131.t1 AT4G31550 40.909 88 51 1 157 243 216 303 3.07e-18 84.7
MS.gene35131.t1 AT1G30650 41.509 106 57 3 153 255 181 284 4.49e-18 85.1
MS.gene35131.t1 AT2G24570 41.758 91 52 1 154 243 210 300 4.90e-18 84.0
MS.gene35131.t1 AT4G23550 50.000 78 35 2 182 255 135 212 7.64e-18 83.2
MS.gene35131.t1 AT4G24240 39.130 92 55 1 153 243 247 338 3.84e-17 82.0
MS.gene35131.t1 AT3G01080 54.412 68 30 1 187 254 205 271 7.57e-17 80.9
MS.gene35131.t1 AT1G69810 43.678 87 47 2 171 255 129 215 9.09e-17 80.5
MS.gene35131.t1 AT5G28650 40.476 84 49 1 161 243 236 319 9.91e-17 80.5
MS.gene35131.t1 AT1G69810 44.186 86 46 2 171 254 187 272 1.16e-16 80.9
MS.gene35131.t1 AT3G04670 39.286 84 50 1 161 243 236 319 5.35e-16 78.2
MS.gene35131.t1 AT3G56400 32.877 146 65 4 111 241 50 177 1.31e-13 70.9
MS.gene35131.t1 AT1G66560 51.724 58 25 1 187 241 103 160 2.00e-13 69.7
MS.gene35131.t1 AT2G46400 40.659 91 50 2 155 241 71 161 4.73e-13 69.3
MS.gene35131.t1 AT2G40740 36.975 119 68 3 136 248 123 240 5.11e-13 68.9
MS.gene35131.t1 AT5G45260 38.776 98 57 1 159 253 1180 1277 5.19e-13 70.9
MS.gene35131.t1 AT2G40740 36.975 119 68 3 136 248 132 249 5.86e-13 68.9
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.69e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 5.67e-12 67.8
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.69e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 5.73e-12 67.8
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.75e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 5.38e-12 67.8
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.75e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 5.38e-12 67.8
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.80e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 6.11e-12 67.4
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 2.92e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 6.33e-12 67.4
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 3.04e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 5.95e-12 67.8
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 3.15e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 6.17e-12 67.4
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 581 661 3.15e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 6.17e-12 67.4
MS.gene35131.t1 AT4G12020 41.053 95 42 1 113 207 514 594 3.15e-12 68.6
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 399 459 6.47e-12 67.4
MS.gene35131.t1 AT4G12020 40.000 95 43 2 113 207 581 661 3.42e-12 68.2
MS.gene35131.t1 AT4G12020 50.000 62 30 1 185 246 466 526 7.61e-12 67.0
MS.gene35131.t1 AT1G66600 50.000 60 27 1 185 241 101 160 3.80e-12 65.9
MS.gene35131.t1 AT4G11070 51.724 58 25 1 187 241 109 166 5.83e-12 65.9
MS.gene35131.t1 AT4G11070 51.724 58 25 1 187 241 141 198 6.33e-12 66.2
MS.gene35131.t1 AT1G80590 46.032 63 31 1 188 247 86 148 1.42e-11 63.9
MS.gene35131.t1 AT5G24110 39.506 81 41 3 169 241 90 170 2.08e-11 64.3
MS.gene35131.t1 AT1G66550 49.123 57 26 1 188 241 104 160 2.33e-11 63.5
MS.gene35131.t1 AT1G66550 49.123 57 26 1 188 241 109 165 2.68e-11 63.5
MS.gene35131.t1 AT5G01900 50.877 57 25 1 188 241 111 167 2.68e-11 63.5
MS.gene35131.t1 AT2G40750 39.394 99 49 3 154 241 111 209 8.37e-11 62.8
MS.gene35131.t1 AT4G23810 50.000 58 26 1 187 241 158 215 9.68e-11 62.8

Find 69 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGCCGCATTGCCTCTT+AGG 0.193434 4.4:+19583200 None:intergenic
TCAGCACTTGCAACTTCTTT+TGG 0.207735 4.4:-19584306 MS.gene35131:CDS
AATGTTGTTGTGTGAATAAA+TGG 0.267587 4.4:+19583030 None:intergenic
AAGCCTTCAGCTGGAGAATT+AGG 0.278295 4.4:-19584228 MS.gene35131:CDS
GATGATGGATCAAAGTAATT+AGG 0.315468 4.4:+19584384 None:intergenic
GGAGTAGAAGAAGAAGATTC+AGG 0.323631 4.4:-19584138 MS.gene35131:CDS
GGATACAGATGGAGAAAATA+TGG 0.347876 4.4:-19583844 MS.gene35131:CDS
TATGTTGTTATCACAGTTGT+TGG 0.355489 4.4:+19583256 None:intergenic
TTTGTCATGAAAGCAAATCT+TGG 0.365412 4.4:+19583892 None:intergenic
CAACTTCCTCCTGATCAATA+TGG 0.365572 4.4:-19582977 MS.gene35131:CDS
AAGTCTTGGAAGTAAGGTTT+AGG 0.368661 4.4:+19584510 None:intergenic
ACACCTACTCCTTTCTCATA+TGG 0.380056 4.4:-19583151 MS.gene35131:CDS
TCCCTTCCATGTTCCTCAAC+AGG 0.390401 4.4:-19582937 MS.gene35131:CDS
AGCATGAAGTCTTGGAAGTA+AGG 0.391074 4.4:+19584504 None:intergenic
CATACTACTAATACCGTTGC+TGG 0.398105 4.4:-19583055 MS.gene35131:CDS
TGCAGCCGCATTGCCTCTTA+GGG 0.408589 4.4:+19583201 None:intergenic
TTTATAATTTACCTAGGGTA+TGG 0.441482 4.4:+19583799 None:intergenic
ATGTTGTTATCACAGTTGTT+GGG 0.446092 4.4:+19583257 None:intergenic
CGCATTGCCTCTTAGGGAAG+TGG 0.472239 4.4:+19583207 None:intergenic
GTATTAGTAGTATGTGTTGT+TGG 0.475446 4.4:+19583064 None:intergenic
GGTGTAGATAGCAAATTAGA+AGG 0.479581 4.4:+19583169 None:intergenic
CACCTACTCCTTTCTCATAT+GGG 0.481494 4.4:-19583150 MS.gene35131:CDS
AGATGAGTTAAGTGTAGCAA+GGG 0.485632 4.4:+19584191 None:intergenic
AATTCCTCATCTTCTGAAGC+TGG 0.488007 4.4:-19584162 MS.gene35131:CDS
TGAAGGAGTCCATATTGATC+AGG 0.488151 4.4:+19582968 None:intergenic
TGTTGGTTGAGTGATATTGA+AGG 0.491271 4.4:+19583081 None:intergenic
CCTCTTAGGGAAGTGGGGAC+AGG 0.494658 4.4:+19583214 None:intergenic
TGGAAGGGACAATGTCTTGA+AGG 0.497629 4.4:+19582951 None:intergenic
GGAAATCAAAAGCCTTCAGC+TGG 0.499259 4.4:-19584237 MS.gene35131:CDS
TATGATCTAGCATGAAGTCT+TGG 0.502915 4.4:+19584496 None:intergenic
GAAGTTGATCAGCTTGAAGA+TGG 0.506616 4.4:-19583865 MS.gene35131:CDS
GATTAATAATTAGTTGTGGT+TGG 0.509207 4.4:+19582913 None:intergenic
AAACTCATATTATAAGATGA+TGG 0.512143 4.4:+19584369 None:intergenic
TAGATGAGTTAAGTGTAGCA+AGG 0.516970 4.4:+19584190 None:intergenic
CCTGTCCCCACTTCCCTAAG+AGG 0.516979 4.4:-19583214 MS.gene35131:CDS
TGTGGTGGTGCATGTGGAGA+AGG 0.522721 4.4:+19583107 None:intergenic
AACAAGGTGGATAAGAAGAA+AGG 0.531162 4.4:-19583934 MS.gene35131:CDS
ACTATCTCCTTCTTCATCAG+AGG 0.542665 4.4:-19584280 MS.gene35131:CDS
ACTGTGATAACAACATATGA+AGG 0.544058 4.4:-19583250 MS.gene35131:CDS
AGGTGTTGTGGTGGTGCATG+TGG 0.547185 4.4:+19583101 None:intergenic
GAGTGATATTGAAGGTGTTG+TGG 0.553555 4.4:+19583089 None:intergenic
GCATTGCCTCTTAGGGAAGT+GGG 0.561932 4.4:+19583208 None:intergenic
GTTGGTCCTGTTGAGGAACA+TGG 0.565768 4.4:+19582931 None:intergenic
AAGTTTGACCCATATGAGAA+AGG 0.572488 4.4:+19583142 None:intergenic
TGAATAAATGGAACCAGCAA+CGG 0.572616 4.4:+19583042 None:intergenic
ATGTGGAGAAGGAGATCTTG+AGG 0.575636 4.4:+19583118 None:intergenic
TGTGGAGAAGGAGATCTTGA+GGG 0.577615 4.4:+19583119 None:intergenic
TCCTCCAGCTTCAGAAGATG+AGG 0.581022 4.4:+19584158 None:intergenic
TCCTGTTGAGGAACATGGAA+GGG 0.589573 4.4:+19582936 None:intergenic
AGTTGTGGTTGGTCCTGTTG+AGG 0.591010 4.4:+19582924 None:intergenic
TCAAGAATAGTCCATACCCT+AGG 0.603668 4.4:-19583810 MS.gene35131:intron
AAGTTTACAAGGAGGAAACA+TGG 0.604167 4.4:-19584340 MS.gene35131:CDS
TGATGAATCTAAGTTATGAA+AGG 0.609474 4.4:+19584410 None:intergenic
TCAGCTGGAGAATTAGGTGG+TGG 0.610560 4.4:-19584222 MS.gene35131:CDS
CCACCTAATTCTCCAGCTGA+AGG 0.620428 4.4:+19584225 None:intergenic
GTCCTGTTGAGGAACATGGA+AGG 0.623164 4.4:+19582935 None:intergenic
AGCTTGAAGATGGATACAGA+TGG 0.629345 4.4:-19583855 MS.gene35131:CDS
GACCCATATGAGAAAGGAGT+AGG 0.632698 4.4:+19583148 None:intergenic
AGGAGTCCATATTGATCAGG+AGG 0.634490 4.4:+19582971 None:intergenic
TCTTGATTAATAATTAGTTG+TGG 0.637795 4.4:+19582909 None:intergenic
TGATATTGAAGGTGTTGTGG+TGG 0.638159 4.4:+19583092 None:intergenic
TCCTCATCTTCTGAAGCTGG+AGG 0.647810 4.4:-19584159 MS.gene35131:CDS
GGGCAAATTAAAGAAGAACC+AGG 0.648527 4.4:-19584096 MS.gene35131:CDS
CCTTCAGCTGGAGAATTAGG+TGG 0.660060 4.4:-19584225 MS.gene35131:CDS
TTTACTGAAAGTTTACAAGG+AGG 0.665442 4.4:-19584348 MS.gene35131:CDS
CATTGCCTCTTAGGGAAGTG+GGG 0.682570 4.4:+19583209 None:intergenic
GAAATACAGGAACAACAAGG+TGG 0.704287 4.4:-19583947 MS.gene35131:intron
AATGAAATACAGGAACAACA+AGG 0.714154 4.4:-19583950 MS.gene35131:intron
CACTTCCCTAAGAGGCAATG+CGG 0.742780 4.4:-19583206 MS.gene35131:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTACTTAATATATGTTT+TGG - chr4.4:19583471-19583490 MS.gene35131:intron 10.0%
!! AAACTCATATTATAAGATGA+TGG + chr4.4:19583078-19583097 None:intergenic 20.0%
!! AACTGTTTATAATTTACCTA+GGG + chr4.4:19583653-19583672 None:intergenic 20.0%
!! AGATAATTAAGTTTAAGAAG+AGG + chr4.4:19583409-19583428 None:intergenic 20.0%
!! ATATATATTAATGTCTCTCT+TGG + chr4.4:19583885-19583904 None:intergenic 20.0%
!! TAAAAACAAAAGGAAATGAA+AGG - chr4.4:19583923-19583942 MS.gene35131:CDS 20.0%
!! TATATATTAATGTCTCTCTT+GGG + chr4.4:19583884-19583903 None:intergenic 20.0%
!!! TATTGACTTTGTTTTAATAG+TGG + chr4.4:19583698-19583717 None:intergenic 20.0%
! AAACCCTTGAATTTAATTGA+TGG - chr4.4:19583433-19583452 MS.gene35131:intron 25.0%
! AATGTTGTTGTGTGAATAAA+TGG + chr4.4:19584417-19584436 None:intergenic 25.0%
! AGGAAAGAGAAAGAAAAATA+TGG - chr4.4:19583326-19583345 MS.gene35131:CDS 25.0%
! CAACTGTTTATAATTTACCT+AGG + chr4.4:19583654-19583673 None:intergenic 25.0%
! GAAAGAGAAAGAAAAATATG+GGG - chr4.4:19583328-19583347 MS.gene35131:intron 25.0%
! GGAAAGAGAAAGAAAAATAT+GGG - chr4.4:19583327-19583346 MS.gene35131:intron 25.0%
! TACTTGATGTAATTTGAACA+TGG + chr4.4:19583970-19583989 None:intergenic 25.0%
! TAGACTATAGAGTATAGTAT+AGG + chr4.4:19583754-19583773 None:intergenic 25.0%
! TGATGAATCTAAGTTATGAA+AGG + chr4.4:19583037-19583056 None:intergenic 25.0%
! TTATAAACAGTTGCATTCAA+TGG - chr4.4:19583661-19583680 MS.gene35131:intron 25.0%
! TTTATAATTTACCTAGGGTA+TGG + chr4.4:19583648-19583667 None:intergenic 25.0%
!! AGTTTTACTGAAAGTTTACA+AGG - chr4.4:19583093-19583112 MS.gene35131:CDS 25.0%
!!! CTTTGTTTTAATAGTGGTAA+TGG + chr4.4:19583692-19583711 None:intergenic 25.0%
!!! TATGTTTTGGAATGAAATAC+AGG - chr4.4:19583484-19583503 MS.gene35131:intron 25.0%
!!! TCATTTCCTTTTGTTTTTAC+TGG + chr4.4:19583922-19583941 None:intergenic 25.0%
AATGAAATACAGGAACAACA+AGG - chr4.4:19583494-19583513 MS.gene35131:intron 30.0%
ACTGTGATAACAACATATGA+AGG - chr4.4:19584194-19584213 MS.gene35131:CDS 30.0%
ATGTTGTTATCACAGTTGTT+GGG + chr4.4:19584190-19584209 None:intergenic 30.0%
GAAATGAAAGGAAAGTCAAA+AGG - chr4.4:19583935-19583954 MS.gene35131:CDS 30.0%
GCACCATCAATTAAATTCAA+GGG + chr4.4:19583439-19583458 None:intergenic 30.0%
GTATTAGTAGTATGTGTTGT+TGG + chr4.4:19584383-19584402 None:intergenic 30.0%
TATGTTGTTATCACAGTTGT+TGG + chr4.4:19584191-19584210 None:intergenic 30.0%
TCATAGCCAGTAAAAACAAA+AGG - chr4.4:19583913-19583932 MS.gene35131:CDS 30.0%
TCTAGATACCATCAAAACAA+TGG - chr4.4:19584012-19584031 MS.gene35131:intron 30.0%
TGCACCATCAATTAAATTCA+AGG + chr4.4:19583440-19583459 None:intergenic 30.0%
TTTACTGAAAGTTTACAAGG+AGG - chr4.4:19583096-19583115 MS.gene35131:CDS 30.0%
TTTGTCATGAAAGCAAATCT+TGG + chr4.4:19583555-19583574 None:intergenic 30.0%
!! GAAATTGCATTTGATTTTGC+AGG - chr4.4:19584099-19584118 MS.gene35131:CDS 30.0%
!! GACAAGAAAGCTCTAAAAAT+GGG - chr4.4:19583370-19583389 MS.gene35131:intron 30.0%
!! GATGATGGATCAAAGTAATT+AGG + chr4.4:19583063-19583082 None:intergenic 30.0%
!!! GTTTTTTCTTCTGTTGATCA+AGG - chr4.4:19583186-19583205 MS.gene35131:CDS 30.0%
AACAAGGTGGATAAGAAGAA+AGG - chr4.4:19583510-19583529 MS.gene35131:intron 35.0%
AAGTCTTGGAAGTAAGGTTT+AGG + chr4.4:19582937-19582956 None:intergenic 35.0%
AAGTTTACAAGGAGGAAACA+TGG - chr4.4:19583104-19583123 MS.gene35131:CDS 35.0%
AAGTTTGACCCATATGAGAA+AGG + chr4.4:19584305-19584324 None:intergenic 35.0%
AGATGAGTTAAGTGTAGCAA+GGG + chr4.4:19583256-19583275 None:intergenic 35.0%
CAAGTATACAACTCTAGCTA+GGG - chr4.4:19583984-19584003 MS.gene35131:intron 35.0%
GAAAAAACCTCTGATGAAGA+AGG + chr4.4:19583174-19583193 None:intergenic 35.0%
GGATACAGATGGAGAAAATA+TGG - chr4.4:19583600-19583619 MS.gene35131:intron 35.0%
GGTGTAGATAGCAAATTAGA+AGG + chr4.4:19584278-19584297 None:intergenic 35.0%
TAGATGAGTTAAGTGTAGCA+AGG + chr4.4:19583257-19583276 None:intergenic 35.0%
TATGATCTAGCATGAAGTCT+TGG + chr4.4:19582951-19582970 None:intergenic 35.0%
TCAAGTATACAACTCTAGCT+AGG - chr4.4:19583983-19584002 MS.gene35131:intron 35.0%
TGAATAAATGGAACCAGCAA+CGG + chr4.4:19584405-19584424 None:intergenic 35.0%
! TGTTGGTTGAGTGATATTGA+AGG + chr4.4:19584366-19584385 None:intergenic 35.0%
!! GGACAAGAAAGCTCTAAAAA+TGG - chr4.4:19583369-19583388 MS.gene35131:intron 35.0%
!!! TACACAAGCCATTGTTTTGA+TGG + chr4.4:19584023-19584042 None:intergenic 35.0%
!!! TTTTTAGAGCTTTCTTGTCC+TGG + chr4.4:19583369-19583388 None:intergenic 35.0%
AATGTCTCTCTTGGGAACAT+GGG + chr4.4:19583876-19583895 None:intergenic 40.0%
ACACCTACTCCTTTCTCATA+TGG - chr4.4:19584293-19584312 MS.gene35131:CDS 40.0%
ACTATCTCCTTCTTCATCAG+AGG - chr4.4:19583164-19583183 MS.gene35131:CDS 40.0%
AGCATGAAGTCTTGGAAGTA+AGG + chr4.4:19582943-19582962 None:intergenic 40.0%
AGCTTGAAGATGGATACAGA+TGG - chr4.4:19583589-19583608 MS.gene35131:intron 40.0%
ATGTACAGTGAAAAAACGCG+TGG - chr4.4:19584148-19584167 MS.gene35131:CDS 40.0%
CAACTTCCTCCTGATCAATA+TGG - chr4.4:19584467-19584486 MS.gene35131:CDS 40.0%
CACCTACTCCTTTCTCATAT+GGG - chr4.4:19584294-19584313 MS.gene35131:CDS 40.0%
CATACTACTAATACCGTTGC+TGG - chr4.4:19584389-19584408 MS.gene35131:CDS 40.0%
GAAATACAGGAACAACAAGG+TGG - chr4.4:19583497-19583516 MS.gene35131:intron 40.0%
GGAGTAGAAGAAGAAGATTC+AGG - chr4.4:19583306-19583325 MS.gene35131:CDS 40.0%
GGGCAAATTAAAGAAGAACC+AGG - chr4.4:19583348-19583367 MS.gene35131:intron 40.0%
TAATGTCTCTCTTGGGAACA+TGG + chr4.4:19583877-19583896 None:intergenic 40.0%
TCAAGAATAGTCCATACCCT+AGG - chr4.4:19583634-19583653 MS.gene35131:intron 40.0%
TGAAGGAGTCCATATTGATC+AGG + chr4.4:19584479-19584498 None:intergenic 40.0%
! GAAGTTGATCAGCTTGAAGA+TGG - chr4.4:19583579-19583598 MS.gene35131:intron 40.0%
! GATTTTGCAGGAGCTATTAC+AGG - chr4.4:19584111-19584130 MS.gene35131:CDS 40.0%
! TCAGCACTTGCAACTTCTTT+TGG - chr4.4:19583138-19583157 MS.gene35131:CDS 40.0%
!! AATTCCTCATCTTCTGAAGC+TGG - chr4.4:19583282-19583301 MS.gene35131:CDS 40.0%
!! GAGTGATATTGAAGGTGTTG+TGG + chr4.4:19584358-19584377 None:intergenic 40.0%
!! TGATATTGAAGGTGTTGTGG+TGG + chr4.4:19584355-19584374 None:intergenic 40.0%
AAGCCTTCAGCTGGAGAATT+AGG - chr4.4:19583216-19583235 MS.gene35131:CDS 45.0%
AGGAGTCCATATTGATCAGG+AGG + chr4.4:19584476-19584495 None:intergenic 45.0%
ATGTCTCTCTTGGGAACATG+GGG + chr4.4:19583875-19583894 None:intergenic 45.0%
ATGTGGAGAAGGAGATCTTG+AGG + chr4.4:19584329-19584348 None:intergenic 45.0%
GACCCATATGAGAAAGGAGT+AGG + chr4.4:19584299-19584318 None:intergenic 45.0%
GGAAATCAAAAGCCTTCAGC+TGG - chr4.4:19583207-19583226 MS.gene35131:CDS 45.0%
TCCTGTTGAGGAACATGGAA+GGG + chr4.4:19584511-19584530 None:intergenic 45.0%
TGGAAGGGACAATGTCTTGA+AGG + chr4.4:19584496-19584515 None:intergenic 45.0%
TGTGGAGAAGGAGATCTTGA+GGG + chr4.4:19584328-19584347 None:intergenic 45.0%
CACTTCCCTAAGAGGCAATG+CGG - chr4.4:19584238-19584257 MS.gene35131:CDS 50.0%
CATTGCCTCTTAGGGAAGTG+GGG + chr4.4:19584238-19584257 None:intergenic 50.0%
CCACCTAATTCTCCAGCTGA+AGG + chr4.4:19583222-19583241 None:intergenic 50.0%
CCTTCAGCTGGAGAATTAGG+TGG - chr4.4:19583219-19583238 MS.gene35131:CDS 50.0%
GCATTGCCTCTTAGGGAAGT+GGG + chr4.4:19584239-19584258 None:intergenic 50.0%
GTCCTGTTGAGGAACATGGA+AGG + chr4.4:19584512-19584531 None:intergenic 50.0%
GTTGGTCCTGTTGAGGAACA+TGG + chr4.4:19584516-19584535 None:intergenic 50.0%
TCAGCTGGAGAATTAGGTGG+TGG - chr4.4:19583222-19583241 MS.gene35131:CDS 50.0%
TCCCTTCCATGTTCCTCAAC+AGG - chr4.4:19584507-19584526 MS.gene35131:CDS 50.0%
TCCTCCAGCTTCAGAAGATG+AGG + chr4.4:19583289-19583308 None:intergenic 50.0%
! AGTTGTGGTTGGTCCTGTTG+AGG + chr4.4:19584523-19584542 None:intergenic 50.0%
!! TCCTCATCTTCTGAAGCTGG+AGG - chr4.4:19583285-19583304 MS.gene35131:CDS 50.0%
CGCATTGCCTCTTAGGGAAG+TGG + chr4.4:19584240-19584259 None:intergenic 55.0%
TGCAGCCGCATTGCCTCTTA+GGG + chr4.4:19584246-19584265 None:intergenic 55.0%
TTGCAGCCGCATTGCCTCTT+AGG + chr4.4:19584247-19584266 None:intergenic 55.0%
! AGGTGTTGTGGTGGTGCATG+TGG + chr4.4:19584346-19584365 None:intergenic 55.0%
! TGTGGTGGTGCATGTGGAGA+AGG + chr4.4:19584340-19584359 None:intergenic 55.0%
CCTCTTAGGGAAGTGGGGAC+AGG + chr4.4:19584233-19584252 None:intergenic 60.0%
CCTGTCCCCACTTCCCTAAG+AGG - chr4.4:19584230-19584249 MS.gene35131:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 19582922 19584544 19582922 ID=MS.gene35131
chr4.4 mRNA 19582922 19584544 19582922 ID=MS.gene35131.t1;Parent=MS.gene35131
chr4.4 exon 19584075 19584544 19584075 ID=MS.gene35131.t1.exon1;Parent=MS.gene35131.t1
chr4.4 CDS 19584075 19584544 19584075 ID=cds.MS.gene35131.t1;Parent=MS.gene35131.t1
chr4.4 exon 19583811 19583960 19583811 ID=MS.gene35131.t1.exon2;Parent=MS.gene35131.t1
chr4.4 CDS 19583811 19583960 19583811 ID=cds.MS.gene35131.t1;Parent=MS.gene35131.t1
chr4.4 exon 19582922 19583345 19582922 ID=MS.gene35131.t1.exon3;Parent=MS.gene35131.t1
chr4.4 CDS 19582922 19583345 19582922 ID=cds.MS.gene35131.t1;Parent=MS.gene35131.t1
Gene Sequence

>MS.gene35131

ATGTCTGATGAACCTAAACCTTACTTCCAAGACTTCATGCTAGATCATAATAATTATCATCAGAAAACAGATCAAGAATCTAACATGTACTCATGTGAGAAACAATTTTCAACCTTTCATAACTTAGATTCATCACAACCTAATTACTTTGATCCATCATCTTATAATATGAGTTTTACTGAAAGTTTACAAGGAGGAAACATGGATCACTACAATTCAGCACTTGCAACTTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCTTCTGTTGATCAAGGAAATCAAAAGCCTTCAGCTGGAGAATTAGGTGGTGGTGATCAAACCCTTGCTACACTTAACTCATCTATCTCTAATTCCTCATCTTCTGAAGCTGGAGGAGTAGAAGAAGAAGATTCAGGAAAGAGAAAGAAAAATATGGGGCAAATTAAAGAAGAACCAGGACAAGAAAGCTCTAAAAATGGGTAAATCTTTTCTTCCTCTTCTTAAACTTAATTATCTCATCAAACCCTTGAATTTAATTGATGGTGCAACATGTAGTCATTATTACTTAATATATGTTTTGGAATGAAATACAGGAACAACAAGGTGGATAAGAAGAAAGGAGAGAAGAAGCAGAAAGAACCAAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGTCCATACCCTAGGTAAATTATAAACAGTTGCATTCAATGGAAGATCCATTACCACTATTAAAACAAAGTCAATAATTTCACATAAAACTAAATCATATACTAACTGACCTATACTATACTCTATAGTCTATAGATCTGCTTGATGTAGATGTTAATTTGTAGTTAAATTCATCAAATTCAATTCAAATTTCTTTATACATATATTCAAATCTTATTTATTTATTTACACCCCATGTTCCCAAGAGAGACATTAATATATATTAATTGAATCATAGCCAGTAAAAACAAAAGGAAATGAAAGGAAAGTCAAAAGGAAATTAAAACCATGTTCAAATTACATCAAGTATACAACTCTAGCTAGGGTCTACTCTAGATACCATCAAAACAATGGCTTGTGTATATTTCTTAGCATTAATTAAATTAAGATGAAAGTAATATGATGAATGAATTAATGAGAAATTGCATTTGATTTTGCAGGAGCTATTACAGGTGTACAACACAGAAATGTACAGTGAAAAAACGCGTGGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCCCTAAGAGGCAATGCGGCTGCAATGTTCACACCTTCTAATTTGCTATCTACACCTACTCCTTTCTCATATGGGTCAAACTTCCCTCAAGATCTCCTTCTCCACATGCACCACCACAACACCTTCAATATCACTCAACCAACAACACATACTACTAATACCGTTGCTGGTTCCATTTATTCACACAACAACATTAACAACTCACTTCTTCAACAATATCAACAACAACTTCCTCCTGATCAATATGGACTCCTTCAAGACATTGTCCCTTCCATGTTCCTCAACAGGACCAACCACAACTAA
Protein sequence

>MS.gene35131.t1

MSDEPKPYFQDFMLDHNNYHQKTDQESNMYSCEKQFSTFHNLDSSQPNYFDPSSYNMSFTESLQGGNMDHYNSALATSFGVLSPSSSEVFSSVDQGNQKPSAGELGGGDQTLATLNSSISNSSSSEAGGVEEEDSGKRKKNMGQIKEEPGQESSKNGNNKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSNLLSTPTPFSYGSNFPQDLLLHMHHHNTFNITQPTTHTTNTVAGSIYSHNNINNSLLQQYQQQLPPDQYGLLQDIVPSMFLNRTNHN