Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35149.t1 | XP_003608492.1 | 92.6 | 472 | 33 | 1 | 1 | 472 | 1 | 470 | 9.10E-242 | 845.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35149.t1 | P52410 | 87.0 | 408 | 53 | 0 | 65 | 472 | 66 | 473 | 3.0e-209 | 729.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35149.t1 | G7JDY8 | 92.6 | 472 | 33 | 1 | 1 | 472 | 1 | 470 | 6.6e-242 | 845.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39202 | MS.gene35149 | PPI |
| MS.gene46486 | MS.gene35149 | PPI |
| MS.gene94820 | MS.gene35149 | PPI |
| MS.gene006293 | MS.gene35149 | PPI |
| MS.gene24009 | MS.gene35149 | PPI |
| MS.gene89534 | MS.gene35149 | PPI |
| MS.gene35149 | MS.gene41434 | PPI |
| MS.gene034624 | MS.gene35149 | PPI |
| MS.gene35149 | MS.gene34495 | PPI |
| MS.gene49091 | MS.gene35149 | PPI |
| MS.gene038042 | MS.gene35149 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35149.t1 | MTR_4g096690 | 98.517 | 472 | 5 | 1 | 1 | 472 | 1 | 470 | 0.0 | 954 |
| MS.gene35149.t1 | MTR_1g103020 | 90.105 | 475 | 41 | 4 | 1 | 472 | 1 | 472 | 0.0 | 866 |
| MS.gene35149.t1 | MTR_8g099695 | 71.591 | 440 | 124 | 1 | 33 | 472 | 44 | 482 | 0.0 | 662 |
| MS.gene35149.t1 | MTR_8g099715 | 61.412 | 425 | 113 | 3 | 48 | 472 | 21 | 394 | 0.0 | 530 |
| MS.gene35149.t1 | MTR_2g043530 | 59.398 | 399 | 160 | 2 | 74 | 471 | 91 | 488 | 1.34e-173 | 496 |
| MS.gene35149.t1 | MTR_4g124880 | 59.250 | 400 | 159 | 4 | 74 | 471 | 94 | 491 | 2.57e-170 | 488 |
| MS.gene35149.t1 | MTR_2g043530 | 60.665 | 361 | 141 | 1 | 74 | 434 | 91 | 450 | 1.06e-160 | 462 |
| MS.gene35149.t1 | MTR_4g124880 | 60.519 | 347 | 133 | 4 | 127 | 471 | 1 | 345 | 2.09e-149 | 429 |
| MS.gene35149.t1 | MTR_8g099700 | 63.139 | 274 | 74 | 2 | 26 | 299 | 43 | 289 | 2.72e-117 | 346 |
| MS.gene35149.t1 | MTR_1g069385 | 39.631 | 434 | 235 | 7 | 60 | 468 | 37 | 468 | 1.86e-87 | 276 |
| MS.gene35149.t1 | MTR_1g069385 | 43.149 | 343 | 188 | 4 | 131 | 468 | 5 | 345 | 3.39e-81 | 255 |
| MS.gene35149.t1 | MTR_8g099705 | 74.590 | 122 | 31 | 0 | 329 | 450 | 1 | 122 | 1.37e-55 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35149.t1 | AT5G46290 | 80.882 | 476 | 84 | 2 | 1 | 472 | 1 | 473 | 0.0 | 790 |
| MS.gene35149.t1 | AT5G46290 | 78.252 | 492 | 84 | 3 | 1 | 472 | 1 | 489 | 0.0 | 780 |
| MS.gene35149.t1 | AT5G46290 | 69.748 | 476 | 82 | 4 | 1 | 472 | 1 | 418 | 0.0 | 650 |
| MS.gene35149.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene35149.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene35149.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 40 | 471 | 110 | 541 | 1.06e-167 | 484 |
| MS.gene35149.t1 | AT2G04540 | 40.230 | 435 | 230 | 12 | 60 | 469 | 31 | 460 | 8.21e-82 | 261 |
Find 135 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTATGCTATTACAAATA+TGG | 0.182977 | 4.4:-19375604 | MS.gene35149:CDS |
| TTGGGATTGATTTAGGTTTC+AGG | 0.183362 | 4.4:-19375569 | MS.gene35149:CDS |
| GCCATTATTCCTATTGGTTT+GGG | 0.188973 | 4.4:-19375429 | MS.gene35149:CDS |
| GGGCACTGCCTTGGCGCAGC+TGG | 0.190007 | 4.4:-19373560 | MS.gene35149:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 4.4:-19375576 | MS.gene35149:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 4.4:+19375543 | None:intergenic |
| GGAGAGTCTCTTTGGGGTTT+TGG | 0.230728 | 4.4:+19376181 | None:intergenic |
| TGCCATTATTCCTATTGGTT+TGG | 0.267531 | 4.4:-19375430 | MS.gene35149:CDS |
| GAGACGACGGAGAGTCTCTT+TGG | 0.301000 | 4.4:+19376173 | None:intergenic |
| TGCGAACCGAGTAGGGAATT+TGG | 0.306727 | 4.4:+19375983 | None:intergenic |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 4.4:-19375368 | MS.gene35149:CDS |
| CCAGGCATTTCAAATTCATT+TGG | 0.314348 | 4.4:-19372664 | MS.gene35149:intron |
| ATTTCAAATTCATTTGGATT+TGG | 0.319137 | 4.4:-19372658 | MS.gene35149:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 4.4:+19372824 | None:intergenic |
| AGAGATTAATGCTATCAAAA+AGG | 0.331270 | 4.4:-19373759 | MS.gene35149:CDS |
| TTGGGATCCTTCTCTCTTTG+AGG | 0.337127 | 4.4:+19376128 | None:intergenic |
| GTGGGATCACATTGATTGAT+AGG | 0.337601 | 4.4:-19376016 | MS.gene35149:CDS |
| GGTGGTGGCGGCGGCGGCAT+TGG | 0.352946 | 4.4:+19376208 | None:intergenic |
| AATATGGCTTCAGCTTTACT+TGG | 0.353169 | 4.4:-19375588 | MS.gene35149:CDS |
| GAAGCTGCCATTATTCCTAT+TGG | 0.362133 | 4.4:-19375435 | MS.gene35149:CDS |
| TGGGATTGATTTAGGTTTCA+GGG | 0.362251 | 4.4:-19375568 | MS.gene35149:CDS |
| ATCTTCAAGTGCTTTCTTCC+CGG | 0.364383 | 4.4:+19375872 | None:intergenic |
| CGTACAAATTGATTGATTGA+TGG | 0.365729 | 4.4:+19373485 | None:intergenic |
| ATGTAATACCAGTCTATGAT+AGG | 0.366375 | 4.4:-19373581 | MS.gene35149:intron |
| GGGTGAAGGTGCTGGAGTTT+TGG | 0.370027 | 4.4:-19375313 | MS.gene35149:intron |
| TTTGTTATGGGTGAAGGTGC+TGG | 0.375390 | 4.4:-19375321 | MS.gene35149:CDS |
| ACCTATCATTGCTGAATACT+TGG | 0.377637 | 4.4:-19374921 | MS.gene35149:CDS |
| CCCCAAACCAATAGGAATAA+TGG | 0.379340 | 4.4:+19375428 | None:intergenic |
| AGACGACGGAGAGTCTCTTT+GGG | 0.379518 | 4.4:+19376174 | None:intergenic |
| TTTGGCGGTGGTGGTGGCGG+CGG | 0.379701 | 4.4:+19376199 | None:intergenic |
| CTCGCTTCATGGCATGTTCA+AGG | 0.383805 | 4.4:+19374948 | None:intergenic |
| GGCACTGCCTTGGCGCAGCT+GGG | 0.383994 | 4.4:-19373559 | MS.gene35149:CDS |
| AGTGATCACGACACGCTTCT+TGG | 0.384823 | 4.4:+19376109 | None:intergenic |
| TTCCACTCTTGTTGGTGACT+TGG | 0.387671 | 4.4:-19373783 | MS.gene35149:CDS |
| GATAGGTGCACCTCGCTTCA+TGG | 0.393092 | 4.4:+19374937 | None:intergenic |
| GGCGGTGGTGGTGGCGGCGG+CGG | 0.396876 | 4.4:+19376202 | None:intergenic |
| TAAAGAACGTGCTGGTGTTT+TGG | 0.402018 | 4.4:-19375718 | MS.gene35149:CDS |
| GTCAGGAATGGGTGGTTTAA+CGG | 0.413571 | 4.4:-19375691 | MS.gene35149:CDS |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 4.4:-19375362 | MS.gene35149:CDS |
| GTGATCACGACACGCTTCTT+GGG | 0.422936 | 4.4:+19376110 | None:intergenic |
| CACTGCCTTGGCGCAGCTGG+GGG | 0.431565 | 4.4:-19373557 | MS.gene35149:CDS |
| TCAAATTCATTTGGATTTGG+TGG | 0.432807 | 4.4:-19372655 | MS.gene35149:CDS |
| CGGAGTGGTTCGAGTGGTGA+AGG | 0.433580 | 4.4:+19376242 | None:intergenic |
| CTCTCTTTGAGGAGCGGCAG+TGG | 0.435852 | 4.4:+19376139 | None:intergenic |
| GGTGGCGGCGGCGGCATTGG+AGG | 0.445582 | 4.4:+19376211 | None:intergenic |
| GCCATATTTGTAATAGCATA+AGG | 0.446803 | 4.4:+19375603 | None:intergenic |
| ACAATAAAAGCTATAACAAC+GGG | 0.447114 | 4.4:-19373518 | MS.gene35149:CDS |
| GTTAAGAATCTGATTGAAAA+GGG | 0.449404 | 4.4:-19375654 | MS.gene35149:CDS |
| CATGCAACTTCCACTCTTGT+TGG | 0.451361 | 4.4:-19373791 | MS.gene35149:CDS |
| GCACTGCCTTGGCGCAGCTG+GGG | 0.451754 | 4.4:-19373558 | MS.gene35149:CDS |
| ACGCCAAGCCCATCAGATCT+TGG | 0.452089 | 4.4:+19374860 | None:intergenic |
| AGTTAAGAATCTGATTGAAA+AGG | 0.455234 | 4.4:-19375655 | MS.gene35149:CDS |
| CTCCGGTACTGCAATGTCGC+CGG | 0.463407 | 4.4:-19375891 | MS.gene35149:CDS |
| TCCCGGCGACATTGCAGTAC+CGG | 0.468002 | 4.4:+19375889 | None:intergenic |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 4.4:-19375361 | MS.gene35149:CDS |
| CCCACCCGCAATCATCAAAT+CGG | 0.469221 | 4.4:+19375461 | None:intergenic |
| GGTGAAGGGCGGAGAGTGAA+GGG | 0.471647 | 4.4:+19376257 | None:intergenic |
| TTGGTTGGGTCAGGAATGGG+TGG | 0.473581 | 4.4:-19375699 | MS.gene35149:CDS |
| CCATTATTCCTATTGGTTTG+GGG | 0.476862 | 4.4:-19375428 | MS.gene35149:CDS |
| CTGCTGCCAATCACATTCGT+AGG | 0.477416 | 4.4:-19375491 | MS.gene35149:CDS |
| CATTATTCCTATTGGTTTGG+GGG | 0.482868 | 4.4:-19375427 | MS.gene35149:CDS |
| GAGGCCGATTTGATGATTGC+GGG | 0.483517 | 4.4:-19375465 | MS.gene35149:CDS |
| CCCAAGTATTCAGCAATGAT+AGG | 0.484502 | 4.4:+19374920 | None:intergenic |
| ATGACTGATCCAAGATCTGA+TGG | 0.488578 | 4.4:-19374869 | MS.gene35149:CDS |
| AAATTCCCTACTCGGTTCGC+AGG | 0.490002 | 4.4:-19375981 | MS.gene35149:CDS |
| CTCACCCCTACGAATGTGAT+TGG | 0.491901 | 4.4:+19375485 | None:intergenic |
| GATCCAAGATCTGATGGGCT+TGG | 0.498358 | 4.4:-19374863 | MS.gene35149:CDS |
| TGCTGCCAATCACATTCGTA+GGG | 0.501866 | 4.4:-19375490 | MS.gene35149:CDS |
| TCTGACCTGCGAACCGAGTA+GGG | 0.504912 | 4.4:+19375976 | None:intergenic |
| GCACTTGAAGATGCTGGTCT+CGG | 0.506363 | 4.4:-19375861 | MS.gene35149:CDS |
| TCCGGTACTGCAATGTCGCC+GGG | 0.507162 | 4.4:-19375890 | MS.gene35149:CDS |
| AAGAAGCGTGTCGTGATCAC+TGG | 0.508002 | 4.4:-19376107 | MS.gene35149:CDS |
| ATGCTTCCAAATTCCCTACT+CGG | 0.516081 | 4.4:-19375989 | MS.gene35149:CDS |
| CACAATAAAAGCTATAACAA+CGG | 0.517364 | 4.4:-19373519 | MS.gene35149:CDS |
| AGCTTCTCGCCGGTGAGAGT+GGG | 0.518796 | 4.4:-19376034 | MS.gene35149:CDS |
| CAGAGCAGTCTTGTAGATGC+TGG | 0.520207 | 4.4:-19374824 | MS.gene35149:CDS |
| TGAGGCCGATTTGATGATTG+CGG | 0.522914 | 4.4:-19375466 | MS.gene35149:CDS |
| AAGAAAGCACTTGAAGATGC+TGG | 0.527588 | 4.4:-19375867 | MS.gene35149:CDS |
| AGCTCTGAGGGTTACATCGA+CGG | 0.529142 | 4.4:-19375942 | MS.gene35149:CDS |
| CGGGAAGAATGACCGGAGAC+AGG | 0.533743 | 4.4:-19375922 | MS.gene35149:CDS |
| ATCCGTGGGTTTAGCTCTGA+GGG | 0.533824 | 4.4:-19375954 | MS.gene35149:CDS |
| AAGCTTCTCGCCGGTGAGAG+TGG | 0.533893 | 4.4:-19376035 | MS.gene35149:CDS |
| ATATGGCTTCAGCTTTACTT+GGG | 0.536843 | 4.4:-19375587 | MS.gene35149:CDS |
| ATTATTCCTATTGGTTTGGG+GGG | 0.537089 | 4.4:-19375426 | MS.gene35149:CDS |
| CAATGTGATCCCACTCTCAC+CGG | 0.537398 | 4.4:+19376025 | None:intergenic |
| GCTCTGAGGGTTACATCGAC+GGG | 0.540385 | 4.4:-19375941 | MS.gene35149:CDS |
| GACGACGGAGAGTCTCTTTG+GGG | 0.543879 | 4.4:+19376175 | None:intergenic |
| CAGCATCTACAAGACTGCTC+TGG | 0.543909 | 4.4:+19374825 | None:intergenic |
| GATCCGTGGGTTTAGCTCTG+AGG | 0.548499 | 4.4:-19375955 | MS.gene35149:CDS |
| GGTTCGCAGGTCAGATCCGT+GGG | 0.552078 | 4.4:-19375968 | MS.gene35149:CDS |
| CAGCAGCATGAAATCAATGT+TGG | 0.554966 | 4.4:-19372782 | MS.gene35149:intron |
| CGGTGCCGAAAATCTCGATA+AGG | 0.557505 | 4.4:-19375841 | MS.gene35149:intron |
| CGGTTCGCAGGTCAGATCCG+TGG | 0.558021 | 4.4:-19375969 | MS.gene35149:CDS |
| GGGATTGATTTAGGTTTCAG+GGG | 0.561124 | 4.4:-19375567 | MS.gene35149:CDS |
| ATGGGTGGCGTCACTGTACA+TGG | 0.561821 | 4.4:-19376083 | MS.gene35149:CDS |
| TGGTGAAGGGCGGAGAGTGA+AGG | 0.562830 | 4.4:+19376256 | None:intergenic |
| GGAGACAATCATCCTGTCTC+CGG | 0.564955 | 4.4:+19375910 | None:intergenic |
| GCCGATTTGATGATTGCGGG+TGG | 0.565161 | 4.4:-19375462 | MS.gene35149:CDS |
| CAATCACATTCGTAGGGGTG+AGG | 0.569075 | 4.4:-19375484 | MS.gene35149:CDS |
| AATCAGATTCTTAACTCCGT+CGG | 0.570042 | 4.4:+19375662 | None:intergenic |
| CCTATCATTGCTGAATACTT+GGG | 0.577362 | 4.4:-19374920 | MS.gene35149:CDS |
| ACGGTATCAAAATCAACTGC+AGG | 0.580461 | 4.4:+19372818 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 4.4:-19375929 | MS.gene35149:CDS |
| TGCCGCTCCTCAAAGAGAGA+AGG | 0.582705 | 4.4:-19376135 | MS.gene35149:CDS |
| TGCCAAGTCACCAACAAGAG+TGG | 0.586198 | 4.4:+19373781 | None:intergenic |
| TTCTACGAGAAGCTTCTCGC+CGG | 0.588660 | 4.4:-19376044 | MS.gene35149:CDS |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 4.4:-19372638 | MS.gene35149:CDS |
| CTGCTGCTTGACATTTGCCA+CGG | 0.591270 | 4.4:+19372799 | None:intergenic |
| TGTAATACCAGTCTATGATA+GGG | 0.591992 | 4.4:-19373580 | MS.gene35149:intron |
| ATGACACGATAATACCTTGG+TGG | 0.592334 | 4.4:+19373703 | None:intergenic |
| TCTATGATAGGGCACTGCCT+TGG | 0.593139 | 4.4:-19373569 | MS.gene35149:CDS |
| GCGTGTCGTGATCACTGGCA+TGG | 0.595938 | 4.4:-19376102 | MS.gene35149:CDS |
| CGTGTCGTGATCACTGGCAT+GGG | 0.597426 | 4.4:-19376101 | MS.gene35149:CDS |
| GTCGTGATCACTGGCATGGG+TGG | 0.597540 | 4.4:-19376098 | MS.gene35149:CDS |
| CCGATTTGATGATTGCGGGT+GGG | 0.602467 | 4.4:-19375461 | MS.gene35149:CDS |
| ATCCTTCTCTCTTTGAGGAG+CGG | 0.604302 | 4.4:+19376133 | None:intergenic |
| GGAGTGGTTCGAGTGGTGAA+GGG | 0.605118 | 4.4:+19376243 | None:intergenic |
| ATCTGACCTGCGAACCGAGT+AGG | 0.609425 | 4.4:+19375975 | None:intergenic |
| GGAGACAGGATGATTGTCTC+CGG | 0.614203 | 4.4:-19375908 | MS.gene35149:CDS |
| TGCTGGTGTGTCACCCGAGG+AGG | 0.617547 | 4.4:-19374807 | MS.gene35149:intron |
| CATCAAAATTAATGCCACCA+AGG | 0.623828 | 4.4:-19373717 | MS.gene35149:intron |
| CCATCACGATCTTTATCCCA+AGG | 0.625021 | 4.4:+19375345 | None:intergenic |
| CTTGAACATGCCATGAAGCG+AGG | 0.627955 | 4.4:-19374947 | MS.gene35149:CDS |
| CCTTGGGATAAAGATCGTGA+TGG | 0.632852 | 4.4:-19375345 | MS.gene35149:CDS |
| ACTCTCCGTCGTCTCTTCCG+CGG | 0.640849 | 4.4:-19376165 | MS.gene35149:CDS |
| TAGATTGATAAAGAACGTGC+TGG | 0.644130 | 4.4:-19375726 | MS.gene35149:CDS |
| AGGAGCGGCAGTGGTGACCG+CGG | 0.651078 | 4.4:+19376148 | None:intergenic |
| ATCATTGCTGAATACTTGGG+AGG | 0.652856 | 4.4:-19374917 | MS.gene35149:CDS |
| TGACTGATCCAAGATCTGAT+GGG | 0.653979 | 4.4:-19374868 | MS.gene35149:CDS |
| GTGGTTCGAGTGGTGAAGGG+CGG | 0.658669 | 4.4:+19376246 | None:intergenic |
| TAAAAGCTATAACAACGGGA+TGG | 0.662742 | 4.4:-19373514 | MS.gene35149:CDS |
| GGTGACCGCGGAAGAGACGA+CGG | 0.665798 | 4.4:+19376160 | None:intergenic |
| AACCCTCAGAGCTAAACCCA+CGG | 0.685542 | 4.4:+19375952 | None:intergenic |
| AGATGCTGGTGTGTCACCCG+AGG | 0.697641 | 4.4:-19374810 | MS.gene35149:CDS |
| GCTGCCAATCACATTCGTAG+GGG | 0.729757 | 4.4:-19375489 | MS.gene35149:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTAAAAACATCAAT+TGG | - | chr4.4:19374802-19374821 | MS.gene35149:intron | 10.0% |
| !! | AATATTCAATTACATAAATT+AGG | - | chr4.4:19374444-19374463 | MS.gene35149:intron | 10.0% |
| !! | AAAATATAAATCAGACATTA+AGG | + | chr4.4:19374993-19375012 | None:intergenic | 15.0% |
| !! | AATTTCACAAACATTAATTA+AGG | + | chr4.4:19373668-19373687 | None:intergenic | 15.0% |
| !! | ATAAATAAGGTTATATTGAA+CGG | + | chr4.4:19375628-19375647 | None:intergenic | 15.0% |
| !! | TTACTAAAATTAAAAACAGT+TGG | + | chr4.4:19374673-19374692 | None:intergenic | 15.0% |
| !!! | TTCAATATAACCTTATTTAT+TGG | - | chr4.4:19375628-19375647 | MS.gene35149:CDS | 15.0% |
| !!! | TTTTTTTTCTTCTTTTTCTT+GGG | - | chr4.4:19373861-19373880 | MS.gene35149:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTTTTCT+TGG | - | chr4.4:19373860-19373879 | MS.gene35149:intron | 15.0% |
| !! | AAAAAAATCCAAATCCAATT+AGG | + | chr4.4:19373139-19373158 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAATCCAATTA+GGG | + | chr4.4:19373138-19373157 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr4.4:19373284-19373303 | None:intergenic | 20.0% |
| !! | ATTTCAAATTCATTTGGATT+TGG | - | chr4.4:19376238-19376257 | MS.gene35149:CDS | 20.0% |
| !! | GAAAAAGAAGAAAAAAAAAC+AGG | + | chr4.4:19373859-19373878 | None:intergenic | 20.0% |
| !! | TAACAAATTATCTACCAATA+AGG | + | chr4.4:19375510-19375529 | None:intergenic | 20.0% |
| !!! | AACATATCATATCCTTTTAT+TGG | - | chr4.4:19375983-19376002 | MS.gene35149:CDS | 20.0% |
| !!! | ATAAAAGAGTGTTTAGATAT+AGG | + | chr4.4:19373779-19373798 | None:intergenic | 20.0% |
| !!! | ATGTTTTGTTATTGTTGTTT+TGG | - | chr4.4:19373632-19373651 | MS.gene35149:intron | 20.0% |
| !!! | TAAAAGAGTGTTTAGATATA+GGG | + | chr4.4:19373778-19373797 | None:intergenic | 20.0% |
| ! | AAAAACATCAATTGGATGTA+AGG | - | chr4.4:19374810-19374829 | MS.gene35149:CDS | 25.0% |
| ! | AAAACATCAATTGGATGTAA+GGG | - | chr4.4:19374811-19374830 | MS.gene35149:CDS | 25.0% |
| ! | ACAATAAAAGCTATAACAAC+GGG | - | chr4.4:19375378-19375397 | MS.gene35149:CDS | 25.0% |
| ! | AGAGATTAATGCTATCAAAA+AGG | - | chr4.4:19375137-19375156 | MS.gene35149:intron | 25.0% |
| ! | AGTTAAGAATCTGATTGAAA+AGG | - | chr4.4:19373241-19373260 | MS.gene35149:intron | 25.0% |
| ! | ATGTGATAAAGACCATAATT+TGG | - | chr4.4:19376179-19376198 | MS.gene35149:CDS | 25.0% |
| ! | ATTAATTATAGTTCTTGCGA+AGG | + | chr4.4:19375727-19375746 | None:intergenic | 25.0% |
| ! | ATTTAGTGGTATGATAAATC+TGG | - | chr4.4:19374554-19374573 | MS.gene35149:intron | 25.0% |
| ! | CACAATAAAAGCTATAACAA+CGG | - | chr4.4:19375377-19375396 | MS.gene35149:CDS | 25.0% |
| ! | CTTTCACTTTGCTAATTTAT+GGG | + | chr4.4:19375045-19375064 | None:intergenic | 25.0% |
| ! | GACAAATAAAACAAGACAAT+GGG | - | chr4.4:19375779-19375798 | MS.gene35149:intron | 25.0% |
| ! | GCAAACAAAATGATTACATA+TGG | + | chr4.4:19376031-19376050 | None:intergenic | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr4.4:19373356-19373375 | None:intergenic | 25.0% |
| ! | GCTATATTATGTTAGCAAAA+TGG | - | chr4.4:19374752-19374771 | MS.gene35149:intron | 25.0% |
| ! | GGAAAAGCAATGAATTAAAT+GGG | + | chr4.4:19374184-19374203 | None:intergenic | 25.0% |
| ! | GTTAAGAATCTGATTGAAAA+GGG | - | chr4.4:19373242-19373261 | MS.gene35149:intron | 25.0% |
| ! | GTTTAACAAAGCTAAATAAC+AGG | + | chr4.4:19375662-19375681 | None:intergenic | 25.0% |
| ! | TACTATGAATACAAGTAAAC+AGG | + | chr4.4:19374245-19374264 | None:intergenic | 25.0% |
| ! | TATAAACTGATTATTTGCAG+AGG | + | chr4.4:19374852-19374871 | None:intergenic | 25.0% |
| ! | TATATCTGAATTGAACTGAA+CGG | - | chr4.4:19373110-19373129 | MS.gene35149:intron | 25.0% |
| ! | TCAATTGCAATTATTATGCT+TGG | - | chr4.4:19373687-19373706 | MS.gene35149:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr4.4:19373292-19373311 | MS.gene35149:intron | 25.0% |
| ! | TGACAAATAAAACAAGACAA+TGG | - | chr4.4:19375778-19375797 | MS.gene35149:intron | 25.0% |
| ! | TGGACTATCATGTTATTATT+GGG | - | chr4.4:19375868-19375887 | MS.gene35149:CDS | 25.0% |
| ! | TTAATGATTTCTTTACTGTG+CGG | - | chr4.4:19375742-19375761 | MS.gene35149:intron | 25.0% |
| ! | TTGTACGTTTACTTAATTCT+TGG | - | chr4.4:19375427-19375446 | MS.gene35149:CDS | 25.0% |
| !! | AAATTTATAGCATTGAGTTC+TGG | - | chr4.4:19374389-19374408 | MS.gene35149:intron | 25.0% |
| !! | ATGGACTATCATGTTATTAT+TGG | - | chr4.4:19375867-19375886 | MS.gene35149:CDS | 25.0% |
| !! | TCTAAACACTCTTTTATTAG+AGG | - | chr4.4:19373782-19373801 | MS.gene35149:CDS | 25.0% |
| !! | TTAAACCTTATCGAGATTTT+CGG | + | chr4.4:19373063-19373082 | None:intergenic | 25.0% |
| !!! | AAAGAGTACTGTAATTTAAC+AGG | - | chr4.4:19373915-19373934 | MS.gene35149:intron | 25.0% |
| !!! | ATTCTTGGTTTTTCATGATT+AGG | - | chr4.4:19375442-19375461 | MS.gene35149:CDS | 25.0% |
| !!! | GTTATTTTCAATTCATTCCT+TGG | - | chr4.4:19375264-19375283 | MS.gene35149:intron | 25.0% |
| !!! | TAGTAGAAATTAACTTGTAG+AGG | + | chr4.4:19373889-19373908 | None:intergenic | 25.0% |
| !!! | TGTAATCATTTTGTTTGCTT+TGG | - | chr4.4:19376033-19376052 | MS.gene35149:CDS | 25.0% |
| AAAACACGGGTAAAAAGAAA+AGG | + | chr4.4:19375831-19375850 | None:intergenic | 30.0% | |
| AAACATCAATTGGATGTAAG+GGG | - | chr4.4:19374812-19374831 | MS.gene35149:CDS | 30.0% | |
| AAGCTGCTAACATAATTAAG+TGG | - | chr4.4:19374912-19374931 | MS.gene35149:CDS | 30.0% | |
| AATGCCTGGAAGATAAAAAA+AGG | + | chr4.4:19376221-19376240 | None:intergenic | 30.0% | |
| ACAACATATGCATCAGTTAA+TGG | + | chr4.4:19375290-19375309 | None:intergenic | 30.0% | |
| AGAAGATGTAAGAGAAGAAA+AGG | - | chr4.4:19374577-19374596 | MS.gene35149:intron | 30.0% | |
| ATAAAACATAAAGCTTTCGC+TGG | + | chr4.4:19375232-19375251 | None:intergenic | 30.0% | |
| ATAAAGACCATAATTTGGAC+TGG | - | chr4.4:19376184-19376203 | MS.gene35149:CDS | 30.0% | |
| ATGTAATACCAGTCTATGAT+AGG | - | chr4.4:19375315-19375334 | MS.gene35149:CDS | 30.0% | |
| CGTACAAATTGATTGATTGA+TGG | + | chr4.4:19375414-19375433 | None:intergenic | 30.0% | |
| GCCATATTTGTAATAGCATA+AGG | + | chr4.4:19373296-19373315 | None:intergenic | 30.0% | |
| GCTTTCACTTTGCTAATTTA+TGG | + | chr4.4:19375046-19375065 | None:intergenic | 30.0% | |
| GGGAAAAGCAATGAATTAAA+TGG | + | chr4.4:19374185-19374204 | None:intergenic | 30.0% | |
| GGGTTTCATTTCTAATCATA+TGG | - | chr4.4:19375937-19375956 | MS.gene35149:CDS | 30.0% | |
| TACTGTAATTTAACAGGTGA+TGG | - | chr4.4:19373921-19373940 | MS.gene35149:intron | 30.0% | |
| TCAAATTCATTTGGATTTGG+TGG | - | chr4.4:19376241-19376260 | MS.gene35149:CDS | 30.0% | |
| TGTAATACCAGTCTATGATA+GGG | - | chr4.4:19375316-19375335 | MS.gene35149:CDS | 30.0% | |
| TTAGTTACCAGTCCAAATTA+TGG | + | chr4.4:19376194-19376213 | None:intergenic | 30.0% | |
| ! | AAGTGGAAAGACAATTTGTT+AGG | - | chr4.4:19374929-19374948 | MS.gene35149:CDS | 30.0% |
| ! | CGTTGTTATAGCTTTTATTG+TGG | + | chr4.4:19375379-19375398 | None:intergenic | 30.0% |
| ! | TATGTTTTATACATCATCGC+AGG | - | chr4.4:19375242-19375261 | MS.gene35149:intron | 30.0% |
| ! | TGTGTGTTTTCAACATCTTT+TGG | - | chr4.4:19374267-19374286 | MS.gene35149:intron | 30.0% |
| !! | ATAGTGAGAGCATTATTGAA+GGG | - | chr4.4:19374614-19374633 | MS.gene35149:intron | 30.0% |
| !! | CATGTCATTTGCTTCTTTTT+AGG | - | chr4.4:19375065-19375084 | MS.gene35149:intron | 30.0% |
| !! | CATTAATTTTGATGCCAGAA+GGG | + | chr4.4:19375173-19375192 | None:intergenic | 30.0% |
| !! | TGATTACATATGGTTCTGAA+AGG | + | chr4.4:19376021-19376040 | None:intergenic | 30.0% |
| !! | TTTTTGTGTGTGCTGATATA+TGG | - | chr4.4:19375848-19375867 | MS.gene35149:CDS | 30.0% |
| !!! | GTTATTGTTGTTTTGGATGT+TGG | - | chr4.4:19373639-19373658 | MS.gene35149:intron | 30.0% |
| AAACTGATTATTTGCAGAGG+AGG | + | chr4.4:19374849-19374868 | None:intergenic | 35.0% | |
| AATATGGCTTCAGCTTTACT+TGG | - | chr4.4:19373308-19373327 | MS.gene35149:intron | 35.0% | |
| AATCAGATTCTTAACTCCGT+CGG | + | chr4.4:19373237-19373256 | None:intergenic | 35.0% | |
| ACCTATCATTGCTGAATACT+TGG | - | chr4.4:19373975-19373994 | MS.gene35149:intron | 35.0% | |
| AGGAGAAAAAAATACCTCCT+CGG | + | chr4.4:19374106-19374125 | None:intergenic | 35.0% | |
| ATATGGCTTCAGCTTTACTT+GGG | - | chr4.4:19373309-19373328 | MS.gene35149:intron | 35.0% | |
| ATCAGCACACACAAAAAACA+CGG | + | chr4.4:19375845-19375864 | None:intergenic | 35.0% | |
| ATTATTGAAGGGGGAAACTA+AGG | - | chr4.4:19374625-19374644 | MS.gene35149:intron | 35.0% | |
| CAAAGCTAAATAACAGGTTG+AGG | + | chr4.4:19375656-19375675 | None:intergenic | 35.0% | |
| CATCAAAATTAATGCCACCA+AGG | - | chr4.4:19375179-19375198 | MS.gene35149:intron | 35.0% | |
| CATTCATCAGGTCAAATAGA+GGG | - | chr4.4:19374886-19374905 | MS.gene35149:CDS | 35.0% | |
| CCAGGCATTTCAAATTCATT+TGG | - | chr4.4:19376232-19376251 | MS.gene35149:CDS | 35.0% | |
| CCTATCATTGCTGAATACTT+GGG | - | chr4.4:19373976-19373995 | MS.gene35149:intron | 35.0% | |
| GCAAAATGTGCTTACATACA+GGG | - | chr4.4:19373804-19373823 | MS.gene35149:CDS | 35.0% | |
| GCTAACATAATATAGCATCC+TGG | + | chr4.4:19374748-19374767 | None:intergenic | 35.0% | |
| GTTAGAATCAACTGAGAGAA+TGG | - | chr4.4:19375479-19375498 | MS.gene35149:CDS | 35.0% | |
| TAAAAGCTATAACAACGGGA+TGG | - | chr4.4:19375382-19375401 | MS.gene35149:CDS | 35.0% | |
| TAGATTGATAAAGAACGTGC+TGG | - | chr4.4:19373170-19373189 | MS.gene35149:intron | 35.0% | |
| TCATTCATCAGGTCAAATAG+AGG | - | chr4.4:19374885-19374904 | MS.gene35149:CDS | 35.0% | |
| ! | ACTATGGTGTTAGCATTTAG+TGG | - | chr4.4:19374540-19374559 | MS.gene35149:intron | 35.0% |
| ! | AGAGAATGGACTTTCCTTAT+TGG | - | chr4.4:19375493-19375512 | MS.gene35149:CDS | 35.0% |
| ! | AGAGTGTTTAGATATAGGGA+CGG | + | chr4.4:19373774-19373793 | None:intergenic | 35.0% |
| ! | AGCAACAAAAGCGTAGTAAA+AGG | + | chr4.4:19374126-19374145 | None:intergenic | 35.0% |
| ! | CCAAATGAATTTGAAATGCC+TGG | + | chr4.4:19376235-19376254 | None:intergenic | 35.0% |
| ! | GCTTAAAAAGCATGTATGCA+AGG | - | chr4.4:19374478-19374497 | MS.gene35149:intron | 35.0% |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr4.4:19373320-19373339 | MS.gene35149:intron | 35.0% |
| ! | GGTTGAGGTACCAATAAATA+AGG | + | chr4.4:19375641-19375660 | None:intergenic | 35.0% |
| ! | TGCCATTATTCCTATTGGTT+TGG | - | chr4.4:19373466-19373485 | MS.gene35149:intron | 35.0% |
| ! | TGGGATTGATTTAGGTTTCA+GGG | - | chr4.4:19373328-19373347 | MS.gene35149:intron | 35.0% |
| ! | TTGGGATTGATTTAGGTTTC+AGG | - | chr4.4:19373327-19373346 | MS.gene35149:intron | 35.0% |
| ! | TTTTGGTACACCGTACAATA+GGG | - | chr4.4:19374284-19374303 | MS.gene35149:intron | 35.0% |
| !! | AATTTGGACTGGTAACTAAC+TGG | - | chr4.4:19376195-19376214 | MS.gene35149:CDS | 35.0% |
| !! | ATTATTCCTATTGGTTTGGG+GGG | - | chr4.4:19373470-19373489 | MS.gene35149:intron | 35.0% |
| !! | ATTTTGTTTGCTTTGGTCTC+TGG | - | chr4.4:19376040-19376059 | MS.gene35149:CDS | 35.0% |
| !! | CATAGTGAGAGCATTATTGA+AGG | - | chr4.4:19374613-19374632 | MS.gene35149:intron | 35.0% |
| !! | CATTATTCCTATTGGTTTGG+GGG | - | chr4.4:19373469-19373488 | MS.gene35149:intron | 35.0% |
| !! | CCATTATTCCTATTGGTTTG+GGG | - | chr4.4:19373468-19373487 | MS.gene35149:intron | 35.0% |
| !! | GCATTAATTTTGATGCCAGA+AGG | + | chr4.4:19375174-19375193 | None:intergenic | 35.0% |
| !! | GCCATTATTCCTATTGGTTT+GGG | - | chr4.4:19373467-19373486 | MS.gene35149:intron | 35.0% |
| !! | TAGTGAGAGCATTATTGAAG+GGG | - | chr4.4:19374615-19374634 | MS.gene35149:intron | 35.0% |
| !! | TTTTGTTTGCTTTGGTCTCT+GGG | - | chr4.4:19376041-19376060 | MS.gene35149:CDS | 35.0% |
| !!! | AGATCGTGATGGTTTTGTTA+TGG | - | chr4.4:19373562-19373581 | MS.gene35149:CDS | 35.0% |
| !!! | GATCGTGATGGTTTTGTTAT+GGG | - | chr4.4:19373563-19373582 | MS.gene35149:CDS | 35.0% |
| !!! | TCAAGTCGTGTTGTTTTTGT+GGG | - | chr4.4:19375894-19375913 | MS.gene35149:CDS | 35.0% |
| AAAGGAAGAACATGCTGAAG+GGG | + | chr4.4:19374205-19374224 | None:intergenic | 40.0% | |
| AACAGGAAAGTAGAGTAAGC+TGG | + | chr4.4:19374228-19374247 | None:intergenic | 40.0% | |
| AACGGATCCCTAATTGGATT+TGG | - | chr4.4:19373128-19373147 | MS.gene35149:intron | 40.0% | |
| AATGTGCTTACATACAGGGA+CGG | - | chr4.4:19373808-19373827 | MS.gene35149:CDS | 40.0% | |
| ACGGTATCAAAATCAACTGC+AGG | + | chr4.4:19376081-19376100 | None:intergenic | 40.0% | |
| ATCATTGCTGAATACTTGGG+AGG | - | chr4.4:19373979-19373998 | MS.gene35149:intron | 40.0% | |
| ATCTTCAAGTGCTTTCTTCC+CGG | + | chr4.4:19373027-19373046 | None:intergenic | 40.0% | |
| ATGACACGATAATACCTTGG+TGG | + | chr4.4:19375196-19375215 | None:intergenic | 40.0% | |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr4.4:19373528-19373547 | MS.gene35149:CDS | 40.0% | |
| ATGACTGATCCAAGATCTGA+TGG | - | chr4.4:19374027-19374046 | MS.gene35149:intron | 40.0% | |
| ATGCTTCCAAATTCCCTACT+CGG | - | chr4.4:19372907-19372926 | MS.gene35149:intron | 40.0% | |
| CAGCAGCATGAAATCAATGT+TGG | - | chr4.4:19376114-19376133 | MS.gene35149:CDS | 40.0% | |
| CCAATGACACGATAATACCT+TGG | + | chr4.4:19375199-19375218 | None:intergenic | 40.0% | |
| CCCAAGTATTCAGCAATGAT+AGG | + | chr4.4:19373979-19373998 | None:intergenic | 40.0% | |
| CCCCAAACCAATAGGAATAA+TGG | + | chr4.4:19373471-19373490 | None:intergenic | 40.0% | |
| GAAAGGAAGAACATGCTGAA+GGG | + | chr4.4:19374206-19374225 | None:intergenic | 40.0% | |
| GAAAGTAGAGTAAGCTGGAA+AGG | + | chr4.4:19374223-19374242 | None:intergenic | 40.0% | |
| GAAGCTGCCATTATTCCTAT+TGG | - | chr4.4:19373461-19373480 | MS.gene35149:intron | 40.0% | |
| GACAAATCAACATGCAGCAA+TGG | + | chr4.4:19374955-19374974 | None:intergenic | 40.0% | |
| GGAGAAAAAAATACCTCCTC+GGG | + | chr4.4:19374105-19374124 | None:intergenic | 40.0% | |
| GGCAAAATGTGCTTACATAC+AGG | - | chr4.4:19373803-19373822 | MS.gene35149:CDS | 40.0% | |
| GTCAAGCCAAGATTTCTTAG+AGG | + | chr4.4:19374651-19374670 | None:intergenic | 40.0% | |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr4.4:19373535-19373554 | MS.gene35149:CDS | 40.0% | |
| TATGCATCAGTTAATGGCCA+AGG | + | chr4.4:19375284-19375303 | None:intergenic | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr4.4:19376075-19376094 | None:intergenic | 40.0% | |
| TCAGCACACACAAAAAACAC+GGG | + | chr4.4:19375844-19375863 | None:intergenic | 40.0% | |
| TCTCTTGTATTCCAGCATAC+TGG | - | chr4.4:19374708-19374727 | MS.gene35149:intron | 40.0% | |
| TGACTGATCCAAGATCTGAT+GGG | - | chr4.4:19374028-19374047 | MS.gene35149:intron | 40.0% | |
| TGATGAATGAGCGAGTAACT+GGG | + | chr4.4:19374875-19374894 | None:intergenic | 40.0% | |
| TGTATTCCAGCATACTGGTA+CGG | - | chr4.4:19374713-19374732 | MS.gene35149:intron | 40.0% | |
| TGTTTAGATATAGGGACGGA+GGG | + | chr4.4:19373770-19373789 | None:intergenic | 40.0% | |
| TTTGGTACACCGTACAATAG+GGG | - | chr4.4:19374285-19374304 | MS.gene35149:intron | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr4.4:19373535-19373554 | None:intergenic | 40.0% |
| ! | CCAAGGTATTATCGTGTCAT+TGG | - | chr4.4:19375196-19375215 | MS.gene35149:intron | 40.0% |
| ! | CTAAGGCCTCTAAGAAATCT+TGG | - | chr4.4:19374642-19374661 | MS.gene35149:intron | 40.0% |
| ! | CTTTTGGTACACCGTACAAT+AGG | - | chr4.4:19374283-19374302 | MS.gene35149:intron | 40.0% |
| ! | GGGATTGATTTAGGTTTCAG+GGG | - | chr4.4:19373329-19373348 | MS.gene35149:intron | 40.0% |
| ! | GTGGGATCACATTGATTGAT+AGG | - | chr4.4:19372880-19372899 | MS.gene35149:intron | 40.0% |
| !! | AAGAAAGCACTTGAAGATGC+TGG | - | chr4.4:19373029-19373048 | MS.gene35149:intron | 40.0% |
| !! | AAGGTTTTCAAGAACCCTTC+TGG | - | chr4.4:19375156-19375175 | MS.gene35149:intron | 40.0% |
| !! | AGTGAGAGCATTATTGAAGG+GGG | - | chr4.4:19374616-19374635 | MS.gene35149:intron | 40.0% |
| !! | TAAAGAACGTGCTGGTGTTT+TGG | - | chr4.4:19373178-19373197 | MS.gene35149:intron | 40.0% |
| !! | TATGGTTCTGAAAGGCAGAA+CGG | + | chr4.4:19376013-19376032 | None:intergenic | 40.0% |
| !! | TGCAGTTGATTTTGATACCG+TGG | - | chr4.4:19376080-19376099 | MS.gene35149:CDS | 40.0% |
| !!! | CAAGTCGTGTTGTTTTTGTG+GGG | - | chr4.4:19375895-19375914 | MS.gene35149:CDS | 40.0% |
| !!! | CTGGCCTTTTTTTATCTTCC+AGG | - | chr4.4:19376214-19376233 | MS.gene35149:CDS | 40.0% |
| !!! | GATGGTTTTGTTATGGGTGA+AGG | - | chr4.4:19373569-19373588 | MS.gene35149:CDS | 40.0% |
| !!! | GTCAAGTCGTGTTGTTTTTG+TGG | - | chr4.4:19375893-19375912 | MS.gene35149:CDS | 40.0% |
| ACAAAACCCCCCAAACCAAT+AGG | + | chr4.4:19373479-19373498 | None:intergenic | 45.0% | |
| AGATATCCGTACCAGTATGC+TGG | + | chr4.4:19374722-19374741 | None:intergenic | 45.0% | |
| CAAGCCATTATTCCAAGAGG+TGG | + | chr4.4:19375554-19375573 | None:intergenic | 45.0% | |
| CACCTCTTGGAATAATGGCT+TGG | - | chr4.4:19375552-19375571 | MS.gene35149:CDS | 45.0% | |
| CAGTTACTCGCTCATTCATC+AGG | - | chr4.4:19374874-19374893 | MS.gene35149:CDS | 45.0% | |
| CATAGCAGCAGCTTTACAAG+AGG | + | chr4.4:19374342-19374361 | None:intergenic | 45.0% | |
| CATGCAACTTCCACTCTTGT+TGG | - | chr4.4:19375105-19375124 | MS.gene35149:intron | 45.0% | |
| CCATCACGATCTTTATCCCA+AGG | + | chr4.4:19373554-19373573 | None:intergenic | 45.0% | |
| CCATGTCATCCCCTATTGTA+CGG | + | chr4.4:19374297-19374316 | None:intergenic | 45.0% | |
| CCTTGGGATAAAGATCGTGA+TGG | - | chr4.4:19373551-19373570 | MS.gene35149:CDS | 45.0% | |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr4.4:19373534-19373553 | MS.gene35149:CDS | 45.0% | |
| CTGATGAATGAGCGAGTAAC+TGG | + | chr4.4:19374876-19374895 | None:intergenic | 45.0% | |
| GAACTGAACGGATCCCTAAT+TGG | - | chr4.4:19373122-19373141 | MS.gene35149:intron | 45.0% | |
| GACCAAGCCATTATTCCAAG+AGG | + | chr4.4:19375557-19375576 | None:intergenic | 45.0% | |
| GGAAAGGAAGAACATGCTGA+AGG | + | chr4.4:19374207-19374226 | None:intergenic | 45.0% | |
| GTCAGGAATGGGTGGTTTAA+CGG | - | chr4.4:19373205-19373224 | MS.gene35149:intron | 45.0% | |
| GTGGCAGATAATGTGACAGA+GGG | + | chr4.4:19375535-19375554 | None:intergenic | 45.0% | |
| GTGTTTAGATATAGGGACGG+AGG | + | chr4.4:19373771-19373790 | None:intergenic | 45.0% | |
| TCACATTATCTGCCACCTCT+TGG | - | chr4.4:19375539-19375558 | MS.gene35149:CDS | 45.0% | |
| TCTGCCACCTCTTGGAATAA+TGG | - | chr4.4:19375547-19375566 | MS.gene35149:CDS | 45.0% | |
| TGCTGCCAATCACATTCGTA+GGG | - | chr4.4:19373406-19373425 | MS.gene35149:intron | 45.0% | |
| TTGGGATCCTTCTCTCTTTG+AGG | + | chr4.4:19372771-19372790 | None:intergenic | 45.0% | |
| ! | ATCCTTCTCTCTTTGAGGAG+CGG | + | chr4.4:19372766-19372785 | None:intergenic | 45.0% |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr4.4:19373536-19373555 | None:intergenic | 45.0% |
| ! | GGTTTAACGGTGTTTTCCGA+CGG | - | chr4.4:19373218-19373237 | MS.gene35149:intron | 45.0% |
| ! | TTTGTTATGGGTGAAGGTGC+TGG | - | chr4.4:19373575-19373594 | MS.gene35149:intron | 45.0% |
| ! | TTTTGTGGGGTGGACAAAAG+AGG | - | chr4.4:19375908-19375927 | MS.gene35149:CDS | 45.0% |
| !! | ATGGTTCTGAAAGGCAGAAC+GGG | + | chr4.4:19376012-19376031 | None:intergenic | 45.0% |
| !! | GGTGGACAAAAGAGGTGTTT+GGG | - | chr4.4:19375916-19375935 | MS.gene35149:CDS | 45.0% |
| !! | GTGGACAAAAGAGGTGTTTG+GGG | - | chr4.4:19375917-19375936 | MS.gene35149:CDS | 45.0% |
| !! | TGAGGCCGATTTGATGATTG+CGG | - | chr4.4:19373430-19373449 | MS.gene35149:intron | 45.0% |
| !! | TTCCACTCTTGTTGGTGACT+TGG | - | chr4.4:19375113-19375132 | MS.gene35149:intron | 45.0% |
| !!! | AACGTGCTGGTGTTTTGGTT+GGG | - | chr4.4:19373183-19373202 | MS.gene35149:intron | 45.0% |
| !!! | AAGGTGCTGGAGTTTTGGTA+AGG | - | chr4.4:19373588-19373607 | MS.gene35149:intron | 45.0% |
| !!! | CGGCATTGGAGGATTTTTTG+CGG | + | chr4.4:19372677-19372696 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTGGGTCAGGAAT+GGG | - | chr4.4:19373194-19373213 | MS.gene35149:intron | 45.0% |
| !!! | TGTTTTGGTTGGGTCAGGAA+TGG | - | chr4.4:19373193-19373212 | MS.gene35149:intron | 45.0% |
| !!! | TTGGAGGATTTTTTGCGGAG+TGG | + | chr4.4:19372672-19372691 | None:intergenic | 45.0% |
| AACCCTCAGAGCTAAACCCA+CGG | + | chr4.4:19372947-19372966 | None:intergenic | 50.0% | |
| ACATCGACGGGAAGAATGAC+CGG | - | chr4.4:19372967-19372986 | MS.gene35149:intron | 50.0% | |
| AGACGACGGAGAGTCTCTTT+GGG | + | chr4.4:19372725-19372744 | None:intergenic | 50.0% | |
| AGTGATCACGACACGCTTCT+TGG | + | chr4.4:19372790-19372809 | None:intergenic | 50.0% | |
| CAATCACATTCGTAGGGGTG+AGG | - | chr4.4:19373412-19373431 | MS.gene35149:intron | 50.0% | |
| CAATGTGATCCCACTCTCAC+CGG | + | chr4.4:19372874-19372893 | None:intergenic | 50.0% | |
| CAGCATCTACAAGACTGCTC+TGG | + | chr4.4:19374074-19374093 | None:intergenic | 50.0% | |
| CCCACCCGCAATCATCAAAT+CGG | + | chr4.4:19373438-19373457 | None:intergenic | 50.0% | |
| CCGTACAATAGGGGATGACA+TGG | - | chr4.4:19374294-19374313 | MS.gene35149:intron | 50.0% | |
| CTCACCCCTACGAATGTGAT+TGG | + | chr4.4:19373414-19373433 | None:intergenic | 50.0% | |
| CTCGCTTCATGGCATGTTCA+AGG | + | chr4.4:19373951-19373970 | None:intergenic | 50.0% | |
| CTGCTGCCAATCACATTCGT+AGG | - | chr4.4:19373405-19373424 | MS.gene35149:intron | 50.0% | |
| CTGGTACGGATATCTGTACC+AGG | - | chr4.4:19374727-19374746 | MS.gene35149:intron | 50.0% | |
| CTTGAACATGCCATGAAGCG+AGG | - | chr4.4:19373949-19373968 | MS.gene35149:intron | 50.0% | |
| GCTGCCAATCACATTCGTAG+GGG | - | chr4.4:19373407-19373426 | MS.gene35149:intron | 50.0% | |
| GGAGACAATCATCCTGTCTC+CGG | + | chr4.4:19372989-19373008 | None:intergenic | 50.0% | |
| GGAGACAGGATGATTGTCTC+CGG | - | chr4.4:19372988-19373007 | MS.gene35149:intron | 50.0% | |
| GGTGGCAGATAATGTGACAG+AGG | + | chr4.4:19375536-19375555 | None:intergenic | 50.0% | |
| GTGATCACGACACGCTTCTT+GGG | + | chr4.4:19372789-19372808 | None:intergenic | 50.0% | |
| TGCAAGGCTGTCTGTACACA+CGG | - | chr4.4:19374494-19374513 | MS.gene35149:intron | 50.0% | |
| TGCCAAGTCACCAACAAGAG+TGG | + | chr4.4:19375118-19375137 | None:intergenic | 50.0% | |
| TGCGAACCGAGTAGGGAATT+TGG | + | chr4.4:19372916-19372935 | None:intergenic | 50.0% | |
| TGCTTACATACAGGGACGGA+GGG | - | chr4.4:19373812-19373831 | MS.gene35149:CDS | 50.0% | |
| TTCTACGAGAAGCTTCTCGC+CGG | - | chr4.4:19372852-19372871 | MS.gene35149:intron | 50.0% | |
| TTGGATGTAAGGGGCCAAGT+TGG | - | chr4.4:19374821-19374840 | MS.gene35149:CDS | 50.0% | |
| ! | AAATTCCCTACTCGGTTCGC+AGG | - | chr4.4:19372915-19372934 | MS.gene35149:intron | 50.0% |
| ! | AAGAAGCGTGTCGTGATCAC+TGG | - | chr4.4:19372789-19372808 | MS.gene35149:CDS | 50.0% |
| ! | CAGAGCAGTCTTGTAGATGC+TGG | - | chr4.4:19374072-19374091 | MS.gene35149:intron | 50.0% |
| ! | CCGATTTGATGATTGCGGGT+GGG | - | chr4.4:19373435-19373454 | MS.gene35149:intron | 50.0% |
| ! | CGGTGCCGAAAATCTCGATA+AGG | - | chr4.4:19373055-19373074 | MS.gene35149:intron | 50.0% |
| ! | CTGCTGCTTGACATTTGCCA+CGG | + | chr4.4:19376100-19376119 | None:intergenic | 50.0% |
| ! | GCACTTGAAGATGCTGGTCT+CGG | - | chr4.4:19373035-19373054 | MS.gene35149:intron | 50.0% |
| ! | TTTTTGCGGAGTGGTTCGAG+TGG | + | chr4.4:19372663-19372682 | None:intergenic | 50.0% |
| !! | AGCTCTGAGGGTTACATCGA+CGG | - | chr4.4:19372954-19372973 | MS.gene35149:intron | 50.0% |
| !! | ATCCGTGGGTTTAGCTCTGA+GGG | - | chr4.4:19372942-19372961 | MS.gene35149:intron | 50.0% |
| !! | GAGGCCGATTTGATGATTGC+GGG | - | chr4.4:19373431-19373450 | MS.gene35149:intron | 50.0% |
| !! | GATCCAAGATCTGATGGGCT+TGG | - | chr4.4:19374033-19374052 | MS.gene35149:intron | 50.0% |
| !! | GGGTGGACAAAAGAGGTGTT+TGG | - | chr4.4:19375915-19375934 | MS.gene35149:CDS | 50.0% |
| !! | TCTATGATAGGGCACTGCCT+TGG | - | chr4.4:19375327-19375346 | MS.gene35149:CDS | 50.0% |
| !! | TGGTTCTGAAAGGCAGAACG+GGG | + | chr4.4:19376011-19376030 | None:intergenic | 50.0% |
| !! | TGTGGGAAGGAGAAGCACTA+TGG | - | chr4.4:19374524-19374543 | MS.gene35149:intron | 50.0% |
| !!! | GAACGTGCTGGTGTTTTGGT+TGG | - | chr4.4:19373182-19373201 | MS.gene35149:intron | 50.0% |
| !!! | GAGTCTCTTTGGGGTTTTGG+CGG | + | chr4.4:19372715-19372734 | None:intergenic | 50.0% |
| !!! | GGAGAGTCTCTTTGGGGTTT+TGG | + | chr4.4:19372718-19372737 | None:intergenic | 50.0% |
| !!! | GTCGTGTTGTTTTTGTGGGG+TGG | - | chr4.4:19375898-19375917 | MS.gene35149:CDS | 50.0% |
| AAGGCTGTCTGTACACACGG+TGG | - | chr4.4:19374497-19374516 | MS.gene35149:intron | 55.0% | |
| ACGCCAAGCCCATCAGATCT+TGG | + | chr4.4:19374039-19374058 | None:intergenic | 55.0% | |
| AGGCTGTCTGTACACACGGT+GGG | - | chr4.4:19374498-19374517 | MS.gene35149:intron | 55.0% | |
| ATCTGACCTGCGAACCGAGT+AGG | + | chr4.4:19372924-19372943 | None:intergenic | 55.0% | |
| ATGGGTGGCGTCACTGTACA+TGG | - | chr4.4:19372813-19372832 | MS.gene35149:CDS | 55.0% | |
| CAGAACGGGGGGCCAATAAA+AGG | + | chr4.4:19375998-19376017 | None:intergenic | 55.0% | |
| CGTGTCGTGATCACTGGCAT+GGG | - | chr4.4:19372795-19372814 | MS.gene35149:CDS | 55.0% | |
| GACGACGGAGAGTCTCTTTG+GGG | + | chr4.4:19372724-19372743 | None:intergenic | 55.0% | |
| GAGACGACGGAGAGTCTCTT+TGG | + | chr4.4:19372726-19372745 | None:intergenic | 55.0% | |
| GATAGGTGCACCTCGCTTCA+TGG | + | chr4.4:19373962-19373981 | None:intergenic | 55.0% | |
| GGAGTGGTTCGAGTGGTGAA+GGG | + | chr4.4:19372656-19372675 | None:intergenic | 55.0% | |
| GGCAGTGCCCTATCATAGAC+TGG | + | chr4.4:19375326-19375345 | None:intergenic | 55.0% | |
| GTGCTTACATACAGGGACGG+AGG | - | chr4.4:19373811-19373830 | MS.gene35149:CDS | 55.0% | |
| TCTGACCTGCGAACCGAGTA+GGG | + | chr4.4:19372923-19372942 | None:intergenic | 55.0% | |
| TGCCGCTCCTCAAAGAGAGA+AGG | - | chr4.4:19372761-19372780 | MS.gene35149:intron | 55.0% | |
| TTGGTTGGGTCAGGAATGGG+TGG | - | chr4.4:19373197-19373216 | MS.gene35149:intron | 55.0% | |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr4.4:19376258-19376277 | MS.gene35149:CDS | 55.0% |
| !! | GATCCGTGGGTTTAGCTCTG+AGG | - | chr4.4:19372941-19372960 | MS.gene35149:intron | 55.0% |
| !! | GCCGATTTGATGATTGCGGG+TGG | - | chr4.4:19373434-19373453 | MS.gene35149:intron | 55.0% |
| !! | GCTCTGAGGGTTACATCGAC+GGG | - | chr4.4:19372955-19372974 | MS.gene35149:intron | 55.0% |
| !! | GGTTCTGAAAGGCAGAACGG+GGG | + | chr4.4:19376010-19376029 | None:intergenic | 55.0% |
| !! | GTTCTGAAAGGCAGAACGGG+GGG | + | chr4.4:19376009-19376028 | None:intergenic | 55.0% |
| !! | TTGCAGAGGAGGCACCAACT+TGG | + | chr4.4:19374838-19374857 | None:intergenic | 55.0% |
| !!! | GCTGGTGTTTTGGTTGGGTC+AGG | - | chr4.4:19373188-19373207 | MS.gene35149:intron | 55.0% |
| !!! | GGGTGAAGGTGCTGGAGTTT+TGG | - | chr4.4:19373583-19373602 | MS.gene35149:intron | 55.0% |
| !!! | TCTCTTTGGGGTTTTGGCGG+TGG | + | chr4.4:19372712-19372731 | None:intergenic | 55.0% |
| AAGCTTCTCGCCGGTGAGAG+TGG | - | chr4.4:19372861-19372880 | MS.gene35149:intron | 60.0% | |
| ACTCTCCGTCGTCTCTTCCG+CGG | - | chr4.4:19372731-19372750 | MS.gene35149:intron | 60.0% | |
| AGATGCTGGTGTGTCACCCG+AGG | - | chr4.4:19374086-19374105 | MS.gene35149:intron | 60.0% | |
| AGCTTCTCGCCGGTGAGAGT+GGG | - | chr4.4:19372862-19372881 | MS.gene35149:intron | 60.0% | |
| CGGAGTGGTTCGAGTGGTGA+AGG | + | chr4.4:19372657-19372676 | None:intergenic | 60.0% | |
| CGGGAAGAATGACCGGAGAC+AGG | - | chr4.4:19372974-19372993 | MS.gene35149:intron | 60.0% | |
| CTCCGGTACTGCAATGTCGC+CGG | - | chr4.4:19373005-19373024 | MS.gene35149:intron | 60.0% | |
| GCGTGTCGTGATCACTGGCA+TGG | - | chr4.4:19372794-19372813 | MS.gene35149:CDS | 60.0% | |
| GGCTGTCTGTACACACGGTG+GGG | - | chr4.4:19374499-19374518 | MS.gene35149:intron | 60.0% | |
| GGTGAAGGGCGGAGAGTGAA+GGG | + | chr4.4:19372642-19372661 | None:intergenic | 60.0% | |
| GGTTCGCAGGTCAGATCCGT+GGG | - | chr4.4:19372928-19372947 | MS.gene35149:intron | 60.0% | |
| GTACACACGGTGGGGTGTGT+GGG | - | chr4.4:19374507-19374526 | MS.gene35149:intron | 60.0% | |
| GTCGTGATCACTGGCATGGG+TGG | - | chr4.4:19372798-19372817 | MS.gene35149:CDS | 60.0% | |
| GTGGTTCGAGTGGTGAAGGG+CGG | + | chr4.4:19372653-19372672 | None:intergenic | 60.0% | |
| TCCCGGCGACATTGCAGTAC+CGG | + | chr4.4:19373010-19373029 | None:intergenic | 60.0% | |
| TCCGGTACTGCAATGTCGCC+GGG | - | chr4.4:19373006-19373025 | MS.gene35149:intron | 60.0% | |
| TGGTGAAGGGCGGAGAGTGA+AGG | + | chr4.4:19372643-19372662 | None:intergenic | 60.0% | |
| TGTACACACGGTGGGGTGTG+TGG | - | chr4.4:19374506-19374525 | MS.gene35149:intron | 60.0% | |
| ! | CTCTCTTTGAGGAGCGGCAG+TGG | + | chr4.4:19372760-19372779 | None:intergenic | 60.0% |
| !!! | CTTTGGGGTTTTGGCGGTGG+TGG | + | chr4.4:19372709-19372728 | None:intergenic | 60.0% |
| ACACGGTGGGGTGTGTGGGA+AGG | - | chr4.4:19374511-19374530 | MS.gene35149:intron | 65.0% | |
| CGGTTCGCAGGTCAGATCCG+TGG | - | chr4.4:19372927-19372946 | MS.gene35149:intron | 65.0% | |
| GGTGACCGCGGAAGAGACGA+CGG | + | chr4.4:19372739-19372758 | None:intergenic | 65.0% | |
| TGCTGGTGTGTCACCCGAGG+AGG | - | chr4.4:19374089-19374108 | MS.gene35149:intron | 65.0% | |
| !! | TGGGGTTTTGGCGGTGGTGG+TGG | + | chr4.4:19372706-19372725 | None:intergenic | 65.0% |
| !!! | GGTTTTGGCGGTGGTGGTGG+CGG | + | chr4.4:19372703-19372722 | None:intergenic | 65.0% |
| AGGAGCGGCAGTGGTGACCG+CGG | + | chr4.4:19372751-19372770 | None:intergenic | 70.0% | |
| CACTGCCTTGGCGCAGCTGG+GGG | - | chr4.4:19375339-19375358 | MS.gene35149:CDS | 70.0% | |
| CCAAACCCCCAGCTGCGCCA+AGG | + | chr4.4:19375347-19375366 | None:intergenic | 70.0% | |
| CCTTGGCGCAGCTGGGGGTT+TGG | - | chr4.4:19375344-19375363 | MS.gene35149:CDS | 70.0% | |
| GCACTGCCTTGGCGCAGCTG+GGG | - | chr4.4:19375338-19375357 | MS.gene35149:CDS | 70.0% | |
| GGCACTGCCTTGGCGCAGCT+GGG | - | chr4.4:19375337-19375356 | MS.gene35149:CDS | 70.0% | |
| !! | TTTGGCGGTGGTGGTGGCGG+CGG | + | chr4.4:19372700-19372719 | None:intergenic | 70.0% |
| ! | GGGCACTGCCTTGGCGCAGC+TGG | - | chr4.4:19375336-19375355 | MS.gene35149:CDS | 75.0% |
| !! | GGTGGCGGCGGCGGCATTGG+AGG | + | chr4.4:19372688-19372707 | None:intergenic | 80.0% |
| !!! | GGTGGTGGCGGCGGCGGCAT+TGG | + | chr4.4:19372691-19372710 | None:intergenic | 80.0% |
| !!! | GGCGGTGGTGGTGGCGGCGG+CGG | + | chr4.4:19372697-19372716 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19372615 | 19376303 | 19372615 | ID=MS.gene35149 |
| chr4.4 | mRNA | 19372615 | 19376303 | 19372615 | ID=MS.gene35149.t1;Parent=MS.gene35149 |
| chr4.4 | exon | 19375842 | 19376303 | 19375842 | ID=MS.gene35149.t1.exon1;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19375842 | 19376303 | 19375842 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19375314 | 19375745 | 19375314 | ID=MS.gene35149.t1.exon2;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19375314 | 19375745 | 19375314 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19374808 | 19374981 | 19374808 | ID=MS.gene35149.t1.exon3;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19374808 | 19374981 | 19374808 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19373718 | 19373831 | 19373718 | ID=MS.gene35149.t1.exon4;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19373718 | 19373831 | 19373718 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19373490 | 19373591 | 19373490 | ID=MS.gene35149.t1.exon5;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19373490 | 19373591 | 19373490 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19372783 | 19372849 | 19372783 | ID=MS.gene35149.t1.exon6;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19372783 | 19372849 | 19372783 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| chr4.4 | exon | 19372615 | 19372682 | 19372615 | ID=MS.gene35149.t1.exon7;Parent=MS.gene35149.t1 |
| chr4.4 | CDS | 19372615 | 19372682 | 19372615 | ID=cds.MS.gene35149.t1;Parent=MS.gene35149.t1 |
| Gene Sequence |
| Protein sequence |
