AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35272

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35272.t1 MTR_5g028930 90.883 351 31 1 452 802 273 622 0.0 654
MS.gene35272.t1 MTR_5g028930 88.489 278 32 0 99 376 1 278 4.25e-165 492
MS.gene35272.t1 MTR_5g028190 50.674 371 168 6 432 796 171 532 5.27e-110 346
MS.gene35272.t1 MTR_5g028190 38.565 223 115 8 188 402 12 220 1.81e-28 121
MS.gene35272.t1 MTR_5g028450 57.143 301 127 2 500 800 1 299 2.82e-105 326
MS.gene35272.t1 MTR_5g028130 47.953 342 166 5 460 796 2 336 6.44e-94 297
MS.gene35272.t1 MTR_5g028900 82.635 167 17 2 603 769 3 157 1.86e-87 273
MS.gene35272.t1 MTR_5g028690 61.765 204 78 0 597 800 36 239 1.47e-80 258
MS.gene35272.t1 MTR_5g028920 82.192 146 23 1 459 604 85 227 2.65e-77 250
MS.gene35272.t1 MTR_5g028830 54.613 271 103 8 336 601 33 288 5.00e-77 251
MS.gene35272.t1 MTR_5g028510 46.688 317 143 8 79 376 18 327 8.39e-74 244
MS.gene35272.t1 MTR_2g438740 36.570 309 181 5 491 795 269 566 2.24e-51 189
MS.gene35272.t1 MTR_5g028840 46.701 197 105 0 602 798 2 198 3.12e-50 175
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 94 327 7.27e-46 168
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 157 390 3.66e-45 168
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 209 442 1.26e-44 167
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 237 470 1.82e-44 168
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 235 468 1.99e-44 167
MS.gene35272.t1 MTR_5g028110 44.898 196 85 3 604 799 4 176 2.25e-44 158
MS.gene35272.t1 MTR_6g017215 44.444 189 100 2 598 786 2 185 3.85e-44 159
MS.gene35272.t1 MTR_3g055310 39.004 241 140 3 537 777 262 495 4.15e-44 167
MS.gene35272.t1 MTR_5g091220 39.623 265 149 4 537 799 350 605 4.50e-44 169
MS.gene35272.t1 MTR_2g438760 36.066 244 155 1 503 746 273 515 3.87e-43 166
MS.gene35272.t1 MTR_2g438720 33.220 295 188 4 503 795 404 691 2.15e-40 159
MS.gene35272.t1 MTR_2g438700 33.562 292 189 4 503 794 402 688 1.80e-39 156
MS.gene35272.t1 MTR_3g455790 37.500 224 137 2 533 756 341 561 8.79e-39 153
MS.gene35272.t1 MTR_2g438400 32.765 293 191 4 503 795 258 544 8.98e-38 149
MS.gene35272.t1 MTR_2g438440 33.106 293 190 4 503 795 399 685 9.81e-38 151
MS.gene35272.t1 MTR_2g438640 31.879 298 197 4 498 795 399 690 1.11e-35 145
MS.gene35272.t1 MTR_2g020510 33.096 281 176 4 500 777 390 661 7.92e-33 135
MS.gene35272.t1 MTR_3g452020 34.091 220 142 2 537 756 170 386 8.68e-33 132
MS.gene35272.t1 MTR_3g452020 34.091 220 142 2 537 756 346 562 4.16e-32 133
MS.gene35272.t1 MTR_2g438640 31.208 298 173 4 498 795 399 664 8.30e-31 129
MS.gene35272.t1 MTR_2g020450 34.164 281 172 6 500 777 393 663 7.26e-29 123
MS.gene35272.t1 MTR_2g020470 32.046 259 148 4 500 755 392 625 1.53e-27 119
MS.gene35272.t1 MTR_3g058570 30.719 306 197 5 496 794 80 377 5.76e-27 114
MS.gene35272.t1 MTR_2g017930 30.218 321 204 8 493 801 352 664 5.73e-26 114
MS.gene35272.t1 MTR_3g050500 26.168 321 218 6 472 777 389 705 1.20e-24 110
MS.gene35272.t1 MTR_5g085340 29.097 299 184 6 500 784 443 727 1.47e-24 110
MS.gene35272.t1 MTR_5g085350 29.268 287 195 3 501 784 425 706 3.02e-24 109
MS.gene35272.t1 MTR_5g085350 29.268 287 195 3 501 784 438 719 3.24e-24 109
MS.gene35272.t1 MTR_5g085360 27.103 321 193 5 500 785 405 719 2.27e-23 106
MS.gene35272.t1 MTR_2g438640 34.536 194 122 3 602 795 399 587 4.27e-23 105
MS.gene35272.t1 MTR_1g113820 30.876 217 147 3 498 714 274 487 1.84e-21 99.8
MS.gene35272.t1 MTR_3g051060 25.000 292 208 6 501 787 435 720 6.48e-21 98.6
MS.gene35272.t1 MTR_1g113760 30.568 229 148 4 491 714 231 453 1.97e-20 96.3
MS.gene35272.t1 MTR_1g113730 29.386 228 150 5 491 714 37 257 2.95e-19 90.9
MS.gene35272.t1 MTR_2g438470 32.090 134 89 2 545 678 366 497 3.43e-13 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35272.t1 AT3G18670 37.377 305 188 3 447 750 295 597 4.39e-56 204
MS.gene35272.t1 AT3G18670 37.671 292 179 3 460 750 253 542 1.01e-55 202
MS.gene35272.t1 AT5G04690 28.176 614 361 18 193 800 111 650 7.90e-51 189
MS.gene35272.t1 AT5G35810 34.722 288 177 2 475 757 16 297 1.73e-48 175
MS.gene35272.t1 AT5G04690 27.524 614 351 18 193 800 111 636 1.24e-47 180
MS.gene35272.t1 AT5G04680 26.645 608 379 19 208 795 119 679 1.18e-46 178
MS.gene35272.t1 AT5G04700 34.084 311 196 5 488 795 351 655 2.55e-46 176
MS.gene35272.t1 AT5G04730 31.909 351 228 5 454 800 250 593 4.15e-46 175
MS.gene35272.t1 AT5G04690 30.025 393 254 6 409 800 244 616 1.19e-44 171
MS.gene35272.t1 AT5G04680 31.661 319 201 6 488 795 215 527 3.87e-42 162
MS.gene35272.t1 AT5G04680 31.661 319 201 6 488 795 324 636 6.28e-42 163
MS.gene35272.t1 AT5G04680 31.661 319 201 6 488 795 338 650 9.62e-42 163
MS.gene35272.t1 AT3G54065 40.741 189 104 2 589 771 9 195 4.64e-35 134

Find 162 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTAAATCCTTTAAGATTT+TGG 0.052410 5.4:+19428290 None:intergenic
AATCGTCTGTTTGGAAAATT+AGG 0.140948 5.4:+19429087 None:intergenic
CAAAATCTTAAAGGATTTAA+TGG 0.183831 5.4:-19428289 MS.gene35272:CDS
CTTAAAGGATTTAATGGTTT+AGG 0.191672 5.4:-19428283 MS.gene35272:CDS
TACTTGATCCAAAATCTTAA+AGG 0.197870 5.4:-19428298 MS.gene35272:CDS
TTGTCAAAGGTGAGCACTTC+TGG 0.227767 5.4:+19431622 None:intergenic
TGATTCTGCTGAGGCTTTCT+TGG 0.229271 5.4:-19431527 MS.gene35272:CDS
TTAAAGGATTTAATGGTTTA+GGG 0.241629 5.4:-19428282 MS.gene35272:CDS
TCAATGTAATCGTTCCATTC+TGG 0.250033 5.4:+19428218 None:intergenic
TGTATCACGGCCGAAGTATT+TGG 0.253000 5.4:-19429363 MS.gene35272:intron
AAGAGAAATTCAATGGTTTA+AGG 0.273664 5.4:-19427945 MS.gene35272:intron
AGTCACTTGTCAGTGGTTTA+TGG 0.276993 5.4:-19430140 MS.gene35272:CDS
TATTCCCACAACTTCATATA+AGG 0.287182 5.4:+19428327 None:intergenic
GTGTCTGGTATATAGCAAAA+TGG 0.293902 5.4:-19429544 MS.gene35272:CDS
AAACAATTTGAAGACAACTA+TGG 0.308546 5.4:-19428761 MS.gene35272:CDS
TACTCTAAAATTTCGGATTC+GGG 0.309902 5.4:+19428734 None:intergenic
ATACTCTAAAATTTCGGATT+CGG 0.321486 5.4:+19428733 None:intergenic
TTCAAGTATCTAGATATCTT+TGG 0.326074 5.4:-19428455 MS.gene35272:intron
TCGTATATACTCTAAAATTT+CGG 0.335462 5.4:+19428727 None:intergenic
ATTCTCCACCTTAGTTTCAT+TGG 0.348105 5.4:-19429127 MS.gene35272:CDS
TGAAACATAAAGAACTATTC+AGG 0.357203 5.4:-19429803 MS.gene35272:CDS
ATCTATCCGCGGTGGCAGAT+GGG 0.360129 5.4:-19427987 MS.gene35272:CDS
CAATGTAATCGTTCCATTCT+GGG 0.361755 5.4:+19428219 None:intergenic
TCATAAATTTGCATACTTGT+TGG 0.365173 5.4:-19428486 MS.gene35272:CDS
TATGCCTCTACCACTGTTAT+CGG 0.368103 5.4:+19428153 None:intergenic
ATCATGTGGACGACAGATTC+AGG 0.370669 5.4:-19430201 MS.gene35272:CDS
CATCTATCCGCGGTGGCAGA+TGG 0.378276 5.4:-19427988 MS.gene35272:CDS
CGGAGAACTCCCCGTTCATA+TGG 0.400120 5.4:-19429490 MS.gene35272:CDS
TGCAGCAGCCTTTACTATCC+CGG 0.408013 5.4:-19426242 MS.gene35272:CDS
AAACTCATATATTCTCTCAA+TGG 0.408587 5.4:-19428091 MS.gene35272:CDS
GGTTGGAGGAATCGTCTGTT+TGG 0.410061 5.4:+19429078 None:intergenic
TGTCTGGTATATAGCAAAAT+GGG 0.411284 5.4:-19429543 MS.gene35272:CDS
CTTTCAATGAATACATCATA+AGG 0.413529 5.4:+19426358 None:intergenic
CAAGGCCTTGAGAAAATCTA+TGG 0.416527 5.4:+19426075 None:intergenic
AACTAAGGTGGAGAATTTGT+TGG 0.419751 5.4:+19429134 None:intergenic
TCTCTTTGTACTTGCAAAGC+AGG 0.422456 5.4:+19427962 None:intergenic
TTTCTCTGTCTGTTCCATGA+TGG 0.424250 5.4:-19426017 MS.gene35272:CDS
GCAAAATCACATTGGCTCTA+GGG 0.433988 5.4:-19425960 MS.gene35272:CDS
GATGCTAGGAGAATGAAAAC+TGG 0.435157 5.4:+19425899 None:intergenic
GCTTCATGAAATAGATCATC+CGG 0.442595 5.4:+19429198 None:intergenic
TTACCGGCAGCCATATGAAC+GGG 0.444007 5.4:+19429480 None:intergenic
TTGCCTGTGAAGTTAATAAC+TGG 0.445321 5.4:-19426055 MS.gene35272:CDS
GTCAGCACCTGGCTTCCTCA+TGG 0.445807 5.4:-19428651 MS.gene35272:CDS
AAATTTAGCCAATGAAACTA+AGG 0.448141 5.4:+19429119 None:intergenic
GTTGTTGATTTCACCGTATG+AGG 0.451688 5.4:+19429176 None:intergenic
GTTCATATGGCTGCCGGTAA+AGG 0.457607 5.4:-19429477 MS.gene35272:CDS
CTAGGACCCATCTTGTCCCT+TGG 0.457620 5.4:-19425929 MS.gene35272:CDS
CAAGTGACTCCATGCATAGC+TGG 0.458118 5.4:+19430154 None:intergenic
CATATATTCTCTCAATGGAT+TGG 0.461472 5.4:-19428086 MS.gene35272:CDS
CAAAATCACATTGGCTCTAG+GGG 0.463524 5.4:-19425959 MS.gene35272:CDS
ATATGCTAGAGGTGGCTTTG+AGG 0.464006 5.4:-19429236 MS.gene35272:intron
GGTGGAAACAATCAACAAAC+TGG 0.464454 5.4:-19426220 MS.gene35272:CDS
AACTGGTACACCCATCTCCT+TGG 0.464757 5.4:-19426203 MS.gene35272:CDS
AGCAAAATCACATTGGCTCT+AGG 0.465537 5.4:-19425961 MS.gene35272:CDS
AGTTTGTAACAAAGCAAGAT+AGG 0.471876 5.4:-19429626 MS.gene35272:CDS
CTTTCATTGTGTCAGGAACA+AGG 0.474209 5.4:-19428372 MS.gene35272:intron
GAAATCAATGCAGGCGGTGG+AGG 0.476649 5.4:-19426431 MS.gene35272:intron
GATAAGCTTCAGAAACACTT+TGG 0.477350 5.4:+19430279 None:intergenic
AAGTACAAAGAGAAATTCAA+TGG 0.477813 5.4:-19427952 MS.gene35272:CDS
CCCACAGACCTTGCCCCATC+AGG 0.478240 5.4:+19431566 None:intergenic
AACAATTTGAAGACAACTAT+GGG 0.483905 5.4:-19428760 MS.gene35272:CDS
AATAGATATAGTGAAGTGTC+TGG 0.483975 5.4:-19429559 MS.gene35272:CDS
ATCGTCTGTTTGGAAAATTA+GGG 0.484326 5.4:+19429088 None:intergenic
CTTCACATTGCAGTAAATGC+TGG 0.488575 5.4:-19429693 MS.gene35272:CDS
ACCTGATGGGGCAAGGTCTG+TGG 0.496442 5.4:-19431567 MS.gene35272:CDS
CTGTGGGATGTTATCAGTAC+TGG 0.497648 5.4:-19431550 MS.gene35272:CDS
TTTCTTCCTATAAAACTACT+TGG 0.498871 5.4:-19428614 MS.gene35272:intron
TGGAACAGACAGAGAAAAGA+AGG 0.504114 5.4:+19426023 None:intergenic
TAACAAAGCAAGATAGGTAT+GGG 0.505545 5.4:-19429620 MS.gene35272:CDS
GTAACAAAGCAAGATAGGTA+TGG 0.507308 5.4:-19429621 MS.gene35272:CDS
CAGCTTTCACTAGCTCCTCA+TGG 0.511981 5.4:+19426335 None:intergenic
GCTTCTTGACCGATGTATCA+CGG 0.513801 5.4:-19429376 MS.gene35272:CDS
AACACTACCAAGGGACAAGA+TGG 0.514768 5.4:+19425922 None:intergenic
GCAGCAGCCTTTACTATCCC+GGG 0.517541 5.4:-19426241 MS.gene35272:CDS
CTCCCCGTTCATATGGCTGC+CGG 0.519011 5.4:-19429483 MS.gene35272:CDS
GTAAAATGTTGGTCAGCACC+TGG 0.519699 5.4:-19428662 MS.gene35272:CDS
AGCCACGAGTGTTCCCTCCT+CGG 0.524474 5.4:-19431656 MS.gene35272:CDS
AGGCCAGTTATTAACTTCAC+AGG 0.525985 5.4:+19426052 None:intergenic
ACGAGTGTTCCCTCCTCGGT+TGG 0.530599 5.4:-19431652 MS.gene35272:CDS
GTTTGTTGATTGTTTCCACC+CGG 0.533450 5.4:+19426223 None:intergenic
CATCATCTTCTGTAAAATGT+TGG 0.533744 5.4:-19428673 MS.gene35272:CDS
TATACCTTATATGAAGTTGT+GGG 0.534682 5.4:-19428331 MS.gene35272:CDS
TTTGAAACCATGAGGAAGCC+AGG 0.536797 5.4:+19428644 None:intergenic
GTTTCCACCCGGGATAGTAA+AGG 0.537498 5.4:+19426234 None:intergenic
CTGATGACACATAATACAAA+CGG 0.538176 5.4:-19429510 MS.gene35272:CDS
CCTTTGACAACTATGAAAGA+TGG 0.538615 5.4:-19431609 MS.gene35272:CDS
ATATACCTTATATGAAGTTG+TGG 0.540164 5.4:-19428332 MS.gene35272:CDS
TTGAATTAGCCAGCTATGCA+TGG 0.540504 5.4:-19430163 MS.gene35272:CDS
TGGAAATGTTGGTGAGAGAA+GGG 0.540997 5.4:-19429656 MS.gene35272:CDS
GAGGTTACTCAAACTTTACC+CGG 0.544096 5.4:-19429217 MS.gene35272:CDS
CTGCCACCGCGGATAGATGA+AGG 0.545727 5.4:+19427992 None:intergenic
CCTGATGGGGCAAGGTCTGT+GGG 0.546360 5.4:-19431566 MS.gene35272:CDS
CAGAGAAAAGAAGGAGCGCA+AGG 0.547894 5.4:+19426032 None:intergenic
CTCAGATACGCTTCATCTCG+AGG 0.552778 5.4:-19425877 MS.gene35272:CDS
CTATTTCATGAAGCCTCATA+CGG 0.554008 5.4:-19429189 MS.gene35272:CDS
TGGAAGAGAATTCTGAAACA+TGG 0.554390 5.4:-19431507 MS.gene35272:CDS
GTCACCGATAACAGTGGTAG+AGG 0.556245 5.4:-19428157 MS.gene35272:CDS
CATGAGGAGCTAGTGAAAGC+TGG 0.556609 5.4:-19426334 MS.gene35272:CDS
TTCTCTCAATGGATTGGAGA+AGG 0.559507 5.4:-19428080 MS.gene35272:CDS
ATACTTCGGCCGTGATACAT+CGG 0.560143 5.4:+19429367 None:intergenic
AGCGTAAAATGCAACCATCA+TGG 0.563306 5.4:+19426003 None:intergenic
AGCTAGTTGTTATATAGCTG+TGG 0.565436 5.4:-19426290 MS.gene35272:CDS
AATTCGCTTACCAAATACTT+CGG 0.565567 5.4:+19429353 None:intergenic
TCGGTGACTGAAAGTAGATA+AGG 0.565683 5.4:+19428172 None:intergenic
CATATTATTCAACTATCATG+TGG 0.566039 5.4:-19430215 MS.gene35272:CDS
TTACATTGATAAATGCTATG+AGG 0.569364 5.4:-19428204 MS.gene35272:CDS
CCATCTTTCATAGTTGTCAA+AGG 0.570913 5.4:+19431609 None:intergenic
CAGTACTGGTGATTCTGCTG+AGG 0.573080 5.4:-19431536 MS.gene35272:CDS
ACAGTGGTAGAGGCATACTT+TGG 0.575702 5.4:-19428147 MS.gene35272:CDS
TCTATCCGCGGTGGCAGATG+GGG 0.577220 5.4:-19427986 MS.gene35272:CDS
TTCTGAAGCTTATCAAAGAG+AGG 0.577717 5.4:-19430270 MS.gene35272:CDS
TGCATGGAGTCACTTGTCAG+TGG 0.577872 5.4:-19430147 MS.gene35272:CDS
GTGGAAATGTTGGTGAGAGA+AGG 0.582358 5.4:-19429657 MS.gene35272:CDS
CTGCTGCAAACATGACAGTA+AGG 0.582538 5.4:+19426257 None:intergenic
TTTCATTGTGTCAGGAACAA+GGG 0.587003 5.4:-19428371 MS.gene35272:intron
ATGTTGTATGCTGCCCAGAA+TGG 0.587233 5.4:-19428232 MS.gene35272:CDS
TAAAGAACTATTCAGGATGG+TGG 0.589530 5.4:-19429796 MS.gene35272:CDS
TAGCGTCCTAGCTGAAGTAG+AGG 0.590772 5.4:+19429716 None:intergenic
CAACAACGAAGAACGAAATG+AGG 0.594464 5.4:-19429160 MS.gene35272:CDS
AGTTATTAACTTCACAGGCA+AGG 0.599770 5.4:+19426057 None:intergenic
GGAACTATTCCAACCGAGGA+GGG 0.602199 5.4:+19431643 None:intergenic
GTCTGGTATATAGCAAAATG+GGG 0.605856 5.4:-19429542 MS.gene35272:CDS
TTTAGCCAATGAAACTAAGG+TGG 0.609057 5.4:+19429122 None:intergenic
ATCTTAAAGCAAAATCACAT+TGG 0.613795 5.4:-19425968 MS.gene35272:CDS
CCTTGAGAAAATCTATGGCA+TGG 0.614844 5.4:+19426080 None:intergenic
AGTTGTGCATCCGATGTGCA+AGG 0.618993 5.4:-19426407 MS.gene35272:CDS
ATATAACCTCTACTTCAGCT+AGG 0.625045 5.4:-19429722 MS.gene35272:CDS
TGAAGCGTATCTGAGATGCT+AGG 0.626094 5.4:+19425885 None:intergenic
TGAAAACTGGAACACTACCA+AGG 0.630318 5.4:+19425912 None:intergenic
TTTACCGGCAGCCATATGAA+CGG 0.632786 5.4:+19429479 None:intergenic
GAAATACAAGACTGAAGTGG+CGG 0.633365 5.4:+19426126 None:intergenic
AGTGATGATAGATACCGCAT+TGG 0.633541 5.4:+19426150 None:intergenic
ACACTACCAAGGGACAAGAT+GGG 0.634544 5.4:+19425923 None:intergenic
CTATTCAGGATGGTGGAGAG+AGG 0.635841 5.4:-19429789 MS.gene35272:CDS
CTTCATGAAATAGATCATCC+GGG 0.637291 5.4:+19429199 None:intergenic
TTTGTTGATTGTTTCCACCC+GGG 0.637356 5.4:+19426224 None:intergenic
GAAAACTGGAACACTACCAA+GGG 0.638165 5.4:+19425913 None:intergenic
AACCGAGGAGGGAACACTCG+TGG 0.638499 5.4:+19431654 None:intergenic
ACATAAAGAACTATTCAGGA+TGG 0.638533 5.4:-19429799 MS.gene35272:CDS
AATGAAATACAAGACTGAAG+TGG 0.641503 5.4:+19426123 None:intergenic
TTAGTTCCTTCATCTATCCG+CGG 0.642808 5.4:-19427998 MS.gene35272:CDS
GATTAAATATCGCACAGACT+CGG 0.647343 5.4:-19428053 MS.gene35272:CDS
GCTACCACAGATATTGAGCA+AGG 0.647343 5.4:-19431448 MS.gene35272:intron
AAAATCACATTGGCTCTAGG+GGG 0.647874 5.4:-19425958 MS.gene35272:CDS
TGGAACTATTCCAACCGAGG+AGG 0.657719 5.4:+19431642 None:intergenic
CTAACCTTGCTCAATATCTG+TGG 0.659253 5.4:+19431444 None:intergenic
TGACAATAATCTGTTGCACA+TGG 0.661381 5.4:-19428029 MS.gene35272:CDS
AAATCACATTGGCTCTAGGG+GGG 0.667788 5.4:-19425957 MS.gene35272:CDS
ATTCTGGGCAGCATACAACA+TGG 0.675561 5.4:+19428234 None:intergenic
TTCTGGAACTATTCCAACCG+AGG 0.676113 5.4:+19431639 None:intergenic
GTTCCTTCATCTATCCGCGG+TGG 0.684957 5.4:-19427995 MS.gene35272:CDS
AATCTAGATAAACTGCAGCA+CGG 0.685062 5.4:-19430101 MS.gene35272:intron
ACAGAAACTTTGAAACCATG+AGG 0.687427 5.4:+19428636 None:intergenic
AATGTTTCTCTTAGCCAATG+CGG 0.690279 5.4:-19426164 MS.gene35272:CDS
CAGGACCCCATCTGCCACCG+CGG 0.691605 5.4:+19427981 None:intergenic
AACAAAGCAAGATAGGTATG+GGG 0.693514 5.4:-19429619 MS.gene35272:CDS
GCAGCCTTTACTATCCCGGG+TGG 0.698771 5.4:-19426238 MS.gene35272:CDS
CTTTCAGTCACCGATAACAG+TGG 0.701123 5.4:-19428163 MS.gene35272:CDS
TACCGGCAGCCATATGAACG+GGG 0.702927 5.4:+19429481 None:intergenic
TCTGGTATATAGCAAAATGG+GGG 0.713064 5.4:-19429541 MS.gene35272:CDS
AAGAGAATTCTGAAACATGG+AGG 0.737687 5.4:-19431504 MS.gene35272:CDS
TGTATTCATTGAAAGCCATG+AGG 0.745296 5.4:-19426350 MS.gene35272:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTGTTTCTTATAAAT+AGG + chr5.4:19427466-19427485 None:intergenic 10.0%
!!! CATTTTTTTAAAAAAAATTG+AGG + chr5.4:19426785-19426804 None:intergenic 10.0%
!!! TGTAATAATAAAATTGTTTT+AGG + chr5.4:19428706-19428725 None:intergenic 10.0%
!! AACATGCATAAATATTATAT+TGG + chr5.4:19427639-19427658 None:intergenic 15.0%
!! ATAATGATGATAAATATGTT+AGG + chr5.4:19427013-19427032 None:intergenic 15.0%
!! TAATGATGATAAATATGTTA+GGG + chr5.4:19427012-19427031 None:intergenic 15.0%
!! TCGATTATTCAATAAAAAAT+TGG + chr5.4:19429839-19429858 None:intergenic 15.0%
!! TGAATAACTAAATATTAGTT+AGG + chr5.4:19429955-19429974 None:intergenic 15.0%
!!! ACACTTGTAAAAAATATTTT+TGG + chr5.4:19431014-19431033 None:intergenic 15.0%
!!! ACTAATTTTTGAATAATGTA+AGG + chr5.4:19426184-19426203 None:intergenic 15.0%
!!! ATATTTGTGTTTATTTTTAC+TGG - chr5.4:19428959-19428978 MS.gene35272:intron 15.0%
!!! ATTTTTCACTAAAATTGATA+TGG - chr5.4:19428603-19428622 MS.gene35272:intron 15.0%
!!! CTTTCATTTAATTTGATTTT+CGG - chr5.4:19429079-19429098 MS.gene35272:CDS 15.0%
!!! GATATAATTTAAAGTTAGTT+AGG + chr5.4:19430460-19430479 None:intergenic 15.0%
!!! TGACAAATATGTTTTTAATT+AGG + chr5.4:19426956-19426975 None:intergenic 15.0%
!!! TGTCCTTAATTTTTTTTTTA+GGG - chr5.4:19426152-19426171 MS.gene35272:CDS 15.0%
!!! TTGGAACAATATTTAAAATT+AGG - chr5.4:19430906-19430925 MS.gene35272:intron 15.0%
!!! TTTTTGTCAAAAATCAAATT+AGG + chr5.4:19426843-19426862 None:intergenic 15.0%
!! AATGATGATAAATATGTTAG+GGG + chr5.4:19427011-19427030 None:intergenic 20.0%
!! AGGAAATGATCAATATTAAA+AGG - chr5.4:19426405-19426424 MS.gene35272:CDS 20.0%
!! ATATAGTAATCACATTCAAA+GGG - chr5.4:19430493-19430512 MS.gene35272:intron 20.0%
!! ATCTATCTATCTATCTATAA+CGG - chr5.4:19429617-19429636 MS.gene35272:CDS 20.0%
!! ATGCATAAATATTATATTGG+AGG + chr5.4:19427636-19427655 None:intergenic 20.0%
!! CAAAATCTTAAAGGATTTAA+TGG - chr5.4:19429210-19429229 MS.gene35272:CDS 20.0%
!! CTTCCCTAAAAAAAAAATTA+AGG + chr5.4:19426158-19426177 None:intergenic 20.0%
!! GATATAATTCAAAGTTAGTA+AGG + chr5.4:19429986-19430005 None:intergenic 20.0%
!! GGAAATGATCAATATTAAAA+GGG - chr5.4:19426406-19426425 MS.gene35272:CDS 20.0%
!! TATATAGTAATCACATTCAA+AGG - chr5.4:19430492-19430511 MS.gene35272:intron 20.0%
!! TATGCATGTTTAAATGTAAA+TGG - chr5.4:19427649-19427668 MS.gene35272:intron 20.0%
!! TGCATAAATATTATATTGGA+GGG + chr5.4:19427635-19427654 None:intergenic 20.0%
!! TTAAAGGATTTAATGGTTTA+GGG - chr5.4:19429217-19429236 MS.gene35272:CDS 20.0%
!! TTAGTTTAAATGATAGGAAA+AGG + chr5.4:19430434-19430453 None:intergenic 20.0%
!! TTGTAATCAAAAGATATTAC+AGG + chr5.4:19427152-19427171 None:intergenic 20.0%
!!! AAACAAAGTTTCATTTTCTA+AGG + chr5.4:19430167-19430186 None:intergenic 20.0%
!!! AACAAAGTTTCATTTTCTAA+GGG + chr5.4:19430166-19430185 None:intergenic 20.0%
!!! ACAATATTTAAAATTAGGAG+TGG - chr5.4:19430911-19430930 MS.gene35272:intron 20.0%
!!! ATATTGATTTTTATGCGATT+AGG - chr5.4:19429863-19429882 MS.gene35272:intron 20.0%
!!! ATCTTTTGATTACAATGTAA+CGG - chr5.4:19427157-19427176 MS.gene35272:intron 20.0%
!!! CATTAAATCCTTTAAGATTT+TGG + chr5.4:19429212-19429231 None:intergenic 20.0%
!!! CATTTACAATTTTATGTTTC+TGG + chr5.4:19427093-19427112 None:intergenic 20.0%
!!! GTGTCCTTAATTTTTTTTTT+AGG - chr5.4:19426151-19426170 MS.gene35272:CDS 20.0%
!!! TATCAATTAGTTGATGTATT+CGG + chr5.4:19427535-19427554 None:intergenic 20.0%
!!! TATTGATTTTTATGCGATTA+GGG - chr5.4:19429864-19429883 MS.gene35272:intron 20.0%
!!! TCGTATATACTCTAAAATTT+CGG + chr5.4:19428775-19428794 None:intergenic 20.0%
!!! TCTATTTTGATATCTTCAAT+AGG + chr5.4:19427740-19427759 None:intergenic 20.0%
!!! TTATAAATGAAGTATTTTGC+AGG + chr5.4:19428445-19428464 None:intergenic 20.0%
!!! TTTAAATGTATTTTGATCCA+AGG + chr5.4:19431316-19431335 None:intergenic 20.0%
! AAACAATTTGAAGACAACTA+TGG - chr5.4:19428738-19428757 MS.gene35272:CDS 25.0%
! AAACTCATATATTCTCTCAA+TGG - chr5.4:19429408-19429427 MS.gene35272:CDS 25.0%
! AAAGAAAGTAATGAGAACTT+TGG - chr5.4:19429782-19429801 MS.gene35272:CDS 25.0%
! AAATTAAGGACACATAATTC+TGG + chr5.4:19426116-19426135 None:intergenic 25.0%
! AAATTTAGCCAATGAAACTA+AGG + chr5.4:19428383-19428402 None:intergenic 25.0%
! AACAATTTGAAGACAACTAT+GGG - chr5.4:19428739-19428758 MS.gene35272:CDS 25.0%
! AAGAGAAATTCAATGGTTTA+AGG - chr5.4:19429554-19429573 MS.gene35272:CDS 25.0%
! AAGTACAAAGAGAAATTCAA+TGG - chr5.4:19429547-19429566 MS.gene35272:CDS 25.0%
! AATAAACAAATCCATTTGCA+AGG + chr5.4:19428929-19428948 None:intergenic 25.0%
! AATAAAGGTAAATCTTAGCT+TGG + chr5.4:19428478-19428497 None:intergenic 25.0%
! AATAACACACGACAATTAAA+TGG - chr5.4:19430855-19430874 MS.gene35272:intron 25.0%
! AATTAAGGACACATAATTCT+GGG + chr5.4:19426115-19426134 None:intergenic 25.0%
! ACAATAAAAGTTCTCCAATT+TGG - chr5.4:19430576-19430595 MS.gene35272:intron 25.0%
! ACAATGAAAAATCGCATTAA+GGG - chr5.4:19431657-19431676 MS.gene35272:CDS 25.0%
! ATAAACAAATCCATTTGCAA+GGG + chr5.4:19428928-19428947 None:intergenic 25.0%
! ATATACCTTATATGAAGTTG+TGG - chr5.4:19429167-19429186 MS.gene35272:CDS 25.0%
! ATCTTAAAGCAAAATCACAT+TGG - chr5.4:19431531-19431550 MS.gene35272:CDS 25.0%
! ATTGTATGAAACGTCTAATA+TGG - chr5.4:19428495-19428514 MS.gene35272:CDS 25.0%
! CATAAGAACGTGATAATTAT+TGG - chr5.4:19430767-19430786 MS.gene35272:intron 25.0%
! CATATTATTCAACTATCATG+TGG - chr5.4:19427284-19427303 MS.gene35272:intron 25.0%
! CCTCTCAAAATATAATTCAA+AGG + chr5.4:19428634-19428653 None:intergenic 25.0%
! CGATATGGTAAATATTTCAA+AGG - chr5.4:19427182-19427201 MS.gene35272:intron 25.0%
! CTTAAAGGATTTAATGGTTT+AGG - chr5.4:19429216-19429235 MS.gene35272:CDS 25.0%
! CTTATGAAAAATTACCTGAT+GGG - chr5.4:19425919-19425938 MS.gene35272:CDS 25.0%
! CTTTCAATGAATACATCATA+AGG + chr5.4:19431144-19431163 None:intergenic 25.0%
! GATAAATCAACAATGTCATA+GGG + chr5.4:19427036-19427055 None:intergenic 25.0%
! GCATATTTACTAGCTAATAA+GGG + chr5.4:19430528-19430547 None:intergenic 25.0%
! GTTAACTCAAGCTAAAAATA+CGG + chr5.4:19426593-19426612 None:intergenic 25.0%
! TACAATGAAAAATCGCATTA+AGG - chr5.4:19431656-19431675 MS.gene35272:CDS 25.0%
! TACTTGATCCAAAATCTTAA+AGG - chr5.4:19429201-19429220 MS.gene35272:CDS 25.0%
! TATACCTTATATGAAGTTGT+GGG - chr5.4:19429168-19429187 MS.gene35272:CDS 25.0%
! TATAGTAATCACATTCAAAG+GGG - chr5.4:19430494-19430513 MS.gene35272:intron 25.0%
! TATCTAGTCTAATCTAAAAG+TGG - chr5.4:19426078-19426097 MS.gene35272:CDS 25.0%
! TCATAAATTTGCATACTTGT+TGG - chr5.4:19429013-19429032 MS.gene35272:intron 25.0%
! TCATAAGATAGGAAAAGTAA+TGG + chr5.4:19430794-19430813 None:intergenic 25.0%
! TCTATCTATCTATCTATAAC+GGG - chr5.4:19429618-19429637 MS.gene35272:CDS 25.0%
! TCTTATGAAAAATTACCTGA+TGG - chr5.4:19425918-19425937 MS.gene35272:CDS 25.0%
! TGAAACATAAAGAACTATTC+AGG - chr5.4:19427696-19427715 MS.gene35272:intron 25.0%
! TGATAAATCAACAATGTCAT+AGG + chr5.4:19427037-19427056 None:intergenic 25.0%
! TGCATATTTACTAGCTAATA+AGG + chr5.4:19430529-19430548 None:intergenic 25.0%
! TTACATTGATAAATGCTATG+AGG - chr5.4:19429295-19429314 MS.gene35272:intron 25.0%
! TTAGACGTTTCATACAATAA+AGG + chr5.4:19428493-19428512 None:intergenic 25.0%
! TTATGAAAAATTACCTGATG+GGG - chr5.4:19425920-19425939 MS.gene35272:CDS 25.0%
! TTCAAGTATCTAGATATCTT+TGG - chr5.4:19429044-19429063 MS.gene35272:intron 25.0%
! TTCTTATAAATAGGACCAAA+AGG - chr5.4:19427574-19427593 MS.gene35272:intron 25.0%
! TTTCTTATAAATAGGATCGA+AGG + chr5.4:19427458-19427477 None:intergenic 25.0%
! TTTCTTCCTATAAAACTACT+TGG - chr5.4:19428885-19428904 MS.gene35272:intron 25.0%
!! AGATTGTCCTTTTTATGATA+GGG + chr5.4:19426912-19426931 None:intergenic 25.0%
!! AGGTTGTTAGTTTAAATGAT+AGG + chr5.4:19430440-19430459 None:intergenic 25.0%
!! AGTTGTCTTCAAATTGTTTT+AGG + chr5.4:19428737-19428756 None:intergenic 25.0%
!! GTATTTTCATCAATTTGCAA+GGG + chr5.4:19426546-19426565 None:intergenic 25.0%
!! TAGATTGTCCTTTTTATGAT+AGG + chr5.4:19426913-19426932 None:intergenic 25.0%
!! TCTCTATATTATACTCCTTT+TGG + chr5.4:19427592-19427611 None:intergenic 25.0%
!! TGTATGAGAATGAACAATTT+TGG - chr5.4:19426733-19426752 MS.gene35272:intron 25.0%
!! TTTACAACTAACTTGATTTG+AGG + chr5.4:19430018-19430037 None:intergenic 25.0%
!!! AACATACCAAGTAGTTTTAT+AGG + chr5.4:19428894-19428913 None:intergenic 25.0%
!!! AGTGAAATCCACTTTTAAAT+CGG + chr5.4:19428523-19428542 None:intergenic 25.0%
!!! AGTTCAATCACTTTTTAAGT+CGG + chr5.4:19426313-19426332 None:intergenic 25.0%
!!! ATACTCTAAAATTTCGGATT+CGG + chr5.4:19428769-19428788 None:intergenic 25.0%
!!! CCTTTGAATTATATTTTGAG+AGG - chr5.4:19428631-19428650 MS.gene35272:CDS 25.0%
!!! GTTTTTTTAGATGGATTCTA+AGG + chr5.4:19430745-19430764 None:intergenic 25.0%
!!! TCTTATGTCGTTTTTTTAGA+TGG + chr5.4:19430754-19430773 None:intergenic 25.0%
!!! TCTTTAACTTGTAACACAAT+TGG + chr5.4:19428180-19428199 None:intergenic 25.0%
!!! TTCTAAGATCATTTTTGAGA+TGG + chr5.4:19430697-19430716 None:intergenic 25.0%
!!! TTTTAATTAGGTGATAGAGA+GGG + chr5.4:19426944-19426963 None:intergenic 25.0%
!!! TTTTTAATTAGGTGATAGAG+AGG + chr5.4:19426945-19426964 None:intergenic 25.0%
AAAGGACACAAAAAAATGAC+TGG - chr5.4:19428040-19428059 MS.gene35272:CDS 30.0%
AATAACTTTATCCTCTTGTG+AGG + chr5.4:19430350-19430369 None:intergenic 30.0%
AATCGTCTGTTTGGAAAATT+AGG + chr5.4:19428415-19428434 None:intergenic 30.0%
AATGAAATACAAGACTGAAG+TGG + chr5.4:19431379-19431398 None:intergenic 30.0%
AATGAGCAATTTCATAAGTG+AGG + chr5.4:19426207-19426226 None:intergenic 30.0%
AATTCGCTTACCAAATACTT+CGG + chr5.4:19428149-19428168 None:intergenic 30.0%
ACATAAAGAACTATTCAGGA+TGG - chr5.4:19427700-19427719 MS.gene35272:intron 30.0%
ACTCTTGTATGAAAGTGATT+TGG - chr5.4:19429754-19429773 MS.gene35272:CDS 30.0%
AGGGACTATTTATGAAACAT+GGG - chr5.4:19429883-19429902 MS.gene35272:intron 30.0%
AGTTTGTAACAAAGCAAGAT+AGG - chr5.4:19427873-19427892 MS.gene35272:intron 30.0%
ATAAAAGTTCTCCAATTTGG+TGG - chr5.4:19430579-19430598 MS.gene35272:intron 30.0%
ATCGTCTGTTTGGAAAATTA+GGG + chr5.4:19428414-19428433 None:intergenic 30.0%
ATTAAGGACACATAATTCTG+GGG + chr5.4:19426114-19426133 None:intergenic 30.0%
CATATATTCTCTCAATGGAT+TGG - chr5.4:19429413-19429432 MS.gene35272:CDS 30.0%
CATCATCTTCTGTAAAATGT+TGG - chr5.4:19428826-19428845 MS.gene35272:intron 30.0%
CTGATGACACATAATACAAA+CGG - chr5.4:19427989-19428008 MS.gene35272:CDS 30.0%
GAAATGATATCATCATGAAG+AGG - chr5.4:19430612-19430631 MS.gene35272:intron 30.0%
GAATTGACAGAACAATTAAC+AGG - chr5.4:19429720-19429739 MS.gene35272:CDS 30.0%
GTTCATGTAAGACAAAGATA+GGG + chr5.4:19426889-19426908 None:intergenic 30.0%
TAAACAAATCCATTTGCAAG+GGG + chr5.4:19428927-19428946 None:intergenic 30.0%
TAACAAAGCAAGATAGGTAT+GGG - chr5.4:19427879-19427898 MS.gene35272:intron 30.0%
TACAGTTTAGTACAAAACAG+AGG + chr5.4:19426487-19426506 None:intergenic 30.0%
TAGGGACTATTTATGAAACA+TGG - chr5.4:19429882-19429901 MS.gene35272:intron 30.0%
TATTCCCACAACTTCATATA+AGG + chr5.4:19429175-19429194 None:intergenic 30.0%
TCAATTAAGCAAGGAGAAAT+CGG + chr5.4:19430142-19430161 None:intergenic 30.0%
TGTCTGGTATATAGCAAAAT+GGG - chr5.4:19427956-19427975 MS.gene35272:CDS 30.0%
TGTGTGTACATGATTATTTC+TGG + chr5.4:19427119-19427138 None:intergenic 30.0%
TTGCATGTTAAGCATTCTAA+TGG + chr5.4:19430303-19430322 None:intergenic 30.0%
TTGTATCCAGTCGTAAATAT+AGG - chr5.4:19427509-19427528 MS.gene35272:intron 30.0%
TTTAATTAGGTGATAGAGAG+GGG + chr5.4:19426943-19426962 None:intergenic 30.0%
TTTCTTTACTCAAAAACTCC+CGG - chr5.4:19428064-19428083 MS.gene35272:CDS 30.0%
! AATAGATATAGTGAAGTGTC+TGG - chr5.4:19427940-19427959 MS.gene35272:intron 30.0%
! AGATTGTTTGAAATCAATGC+AGG - chr5.4:19431059-19431078 MS.gene35272:intron 30.0%
! GATTGTCCTTTTTATGATAG+GGG + chr5.4:19426911-19426930 None:intergenic 30.0%
! GGTATTTTCATCAATTTGCA+AGG + chr5.4:19426547-19426566 None:intergenic 30.0%
! GTCGACTGTTTCTTATAAAT+AGG - chr5.4:19427565-19427584 MS.gene35272:intron 30.0%
! TAATGAGAACTTTGGAGATT+AGG - chr5.4:19429790-19429809 MS.gene35272:CDS 30.0%
!! AAATGAAGTATTTTGCAGGT+TGG + chr5.4:19428441-19428460 None:intergenic 30.0%
!! CTTTTAATTCAAGACATCAG+AGG + chr5.4:19429678-19429697 None:intergenic 30.0%
!! GTGAAATCCACTTTTAAATC+GGG + chr5.4:19428522-19428541 None:intergenic 30.0%
!! TACTCTAAAATTTCGGATTC+GGG + chr5.4:19428768-19428787 None:intergenic 30.0%
!! TTTTTAGATGGATTCTAAGG+TGG + chr5.4:19430742-19430761 None:intergenic 30.0%
!!! ATCTTTTTTGAACACTTCTC+CGG + chr5.4:19428086-19428105 None:intergenic 30.0%
!!! CATTTTTGAGATGGATTCTA+AGG + chr5.4:19430688-19430707 None:intergenic 30.0%
!!! CATTTTTTTGTGTCCTTTAC+CGG + chr5.4:19428038-19428057 None:intergenic 30.0%
AAAATTAGGAGTGGACCAAT+GGG - chr5.4:19430920-19430939 MS.gene35272:intron 35.0%
AACAAAGCAAGATAGGTATG+GGG - chr5.4:19427880-19427899 MS.gene35272:intron 35.0%
AACACACGACAATTAAATGG+TGG - chr5.4:19430858-19430877 MS.gene35272:intron 35.0%
AACTAAGGTGGAGAATTTGT+TGG + chr5.4:19428368-19428387 None:intergenic 35.0%
AATCTAGATAAACTGCAGCA+CGG - chr5.4:19427398-19427417 MS.gene35272:intron 35.0%
AATGGAAGAGATGAACTTGA+AGG + chr5.4:19430285-19430304 None:intergenic 35.0%
AATGTTTCTCTTAGCCAATG+CGG - chr5.4:19431335-19431354 MS.gene35272:intron 35.0%
ACACACGACAATTAAATGGT+GGG - chr5.4:19430859-19430878 MS.gene35272:intron 35.0%
AGCTAGTTGTTATATAGCTG+TGG - chr5.4:19431209-19431228 MS.gene35272:intron 35.0%
AGGCATTTGAGCAACAAAAA+AGG - chr5.4:19426015-19426034 MS.gene35272:CDS 35.0%
AGTTATTAACTTCACAGGCA+AGG + chr5.4:19431445-19431464 None:intergenic 35.0%
ATATAACCTCTACTTCAGCT+AGG - chr5.4:19427777-19427796 MS.gene35272:intron 35.0%
ATATGGACCCGATTTAAAAG+TGG - chr5.4:19428512-19428531 MS.gene35272:intron 35.0%
ATGTATGCTTGATATGCTAG+AGG - chr5.4:19428252-19428271 MS.gene35272:CDS 35.0%
ATTCTCCACCTTAGTTTCAT+TGG - chr5.4:19428372-19428391 MS.gene35272:intron 35.0%
CAATGTAATCGTTCCATTCT+GGG + chr5.4:19429283-19429302 None:intergenic 35.0%
CATGAACCCCTATCATAAAA+AGG - chr5.4:19426902-19426921 MS.gene35272:intron 35.0%
CCATCTTTCATAGTTGTCAA+AGG + chr5.4:19425893-19425912 None:intergenic 35.0%
CCATTACCAATCTTCTTCTA+AGG - chr5.4:19430040-19430059 MS.gene35272:intron 35.0%
CCTGAAAAATGTGGAAATGT+TGG - chr5.4:19427832-19427851 MS.gene35272:intron 35.0%
CCTTAGAAGAAGATTGGTAA+TGG + chr5.4:19430043-19430062 None:intergenic 35.0%
CCTTTGACAACTATGAAAGA+TGG - chr5.4:19425890-19425909 MS.gene35272:CDS 35.0%
CTATTTCATGAAGCCTCATA+CGG - chr5.4:19428310-19428329 MS.gene35272:CDS 35.0%
CTTCATGAAATAGATCATCC+GGG + chr5.4:19428303-19428322 None:intergenic 35.0%
GATAAGCTTCAGAAACACTT+TGG + chr5.4:19427223-19427242 None:intergenic 35.0%
GATTAAATATCGCACAGACT+CGG - chr5.4:19429446-19429465 MS.gene35272:CDS 35.0%
GCTTCATGAAATAGATCATC+CGG + chr5.4:19428304-19428323 None:intergenic 35.0%
GGTTCATGTAAGACAAAGAT+AGG + chr5.4:19426890-19426909 None:intergenic 35.0%
GTAACAAAGCAAGATAGGTA+TGG - chr5.4:19427878-19427897 MS.gene35272:intron 35.0%
GTCTGGTATATAGCAAAATG+GGG - chr5.4:19427957-19427976 MS.gene35272:CDS 35.0%
GTGGATTTCACTATTACTAG+TGG - chr5.4:19428531-19428550 MS.gene35272:intron 35.0%
GTGTCTGGTATATAGCAAAA+TGG - chr5.4:19427955-19427974 MS.gene35272:CDS 35.0%
TAAAATTAGGAGTGGACCAA+TGG - chr5.4:19430919-19430938 MS.gene35272:intron 35.0%
TAAAGAACTATTCAGGATGG+TGG - chr5.4:19427703-19427722 MS.gene35272:intron 35.0%
TAAGTTCCTTTCATTGTGTC+AGG - chr5.4:19429120-19429139 MS.gene35272:CDS 35.0%
TAGTGAAAGCTGGAGAAAAA+TGG - chr5.4:19431175-19431194 MS.gene35272:intron 35.0%
TATCATCATGAAGAGGTTGA+CGG - chr5.4:19430619-19430638 MS.gene35272:intron 35.0%
TCAATGTAATCGTTCCATTC+TGG + chr5.4:19429284-19429303 None:intergenic 35.0%
TCTAAGGGATCAATTAAGCA+AGG + chr5.4:19430151-19430170 None:intergenic 35.0%
TCTGGTATATAGCAAAATGG+GGG - chr5.4:19427958-19427977 MS.gene35272:CDS 35.0%
TGACAATAATCTGTTGCACA+TGG - chr5.4:19429470-19429489 MS.gene35272:CDS 35.0%
TGATCATTTCCTTGTATCAG+CGG + chr5.4:19426397-19426416 None:intergenic 35.0%
TGTATCCCATGTGTCTAATA+GGG + chr5.4:19430829-19430848 None:intergenic 35.0%
TGTATTCATTGAAAGCCATG+AGG - chr5.4:19431149-19431168 MS.gene35272:intron 35.0%
TTAATTAGGTGATAGAGAGG+GGG + chr5.4:19426942-19426961 None:intergenic 35.0%
TTGCCTGTGAAGTTAATAAC+TGG - chr5.4:19431444-19431463 MS.gene35272:intron 35.0%
TTGTATCCCATGTGTCTAAT+AGG + chr5.4:19430830-19430849 None:intergenic 35.0%
TTTAGCCAATGAAACTAAGG+TGG + chr5.4:19428380-19428399 None:intergenic 35.0%
TTTCATTGTGTCAGGAACAA+GGG - chr5.4:19429128-19429147 MS.gene35272:CDS 35.0%
! CCAACATTTCCACATTTTTC+AGG + chr5.4:19427835-19427854 None:intergenic 35.0%
! CTTCTTACCATCCTCATTTT+TGG + chr5.4:19431121-19431140 None:intergenic 35.0%
! TGTCGTTCGACAATTTTAAG+CGG + chr5.4:19426366-19426385 None:intergenic 35.0%
! TTGTTTGAAATCAATGCAGG+CGG - chr5.4:19431062-19431081 MS.gene35272:intron 35.0%
!! AAGAGAATTCTGAAACATGG+AGG - chr5.4:19425995-19426014 MS.gene35272:CDS 35.0%
!! ACAGAAACTTTGAAACCATG+AGG + chr5.4:19428866-19428885 None:intergenic 35.0%
!! TACAATGTAACGGATCGATA+TGG - chr5.4:19427167-19427186 MS.gene35272:intron 35.0%
!! TGGAAGAGAATTCTGAAACA+TGG - chr5.4:19425992-19426011 MS.gene35272:CDS 35.0%
!! TTCTAAGGTGGTAGTTGATA+TGG + chr5.4:19430673-19430692 None:intergenic 35.0%
!! TTCTGAAGCTTATCAAAGAG+AGG - chr5.4:19427229-19427248 MS.gene35272:intron 35.0%
!!! GTATTTTGATCCAAGGAGAT+GGG + chr5.4:19431309-19431328 None:intergenic 35.0%
!!! TCTTTTTTGAACACTTCTCC+GGG + chr5.4:19428085-19428104 None:intergenic 35.0%
!!! TGTATTTTGATCCAAGGAGA+TGG + chr5.4:19431310-19431329 None:intergenic 35.0%
!!! TTTTGAGATGGATTCTAAGG+TGG + chr5.4:19430685-19430704 None:intergenic 35.0%
AAAAATTACCTGATGGGGCA+AGG - chr5.4:19425925-19425944 MS.gene35272:CDS 40.0%
AAACTACAAAGCTAGTCGTG+AGG - chr5.4:19429644-19429663 MS.gene35272:CDS 40.0%
AAATCCATTTGCAAGGGGAA+TGG + chr5.4:19428922-19428941 None:intergenic 40.0%
AACGTGACTTAAGTTACGCT+GGG - chr5.4:19426662-19426681 MS.gene35272:intron 40.0%
AAGGAAGCCAAAAATGAGGA+TGG - chr5.4:19431111-19431130 MS.gene35272:intron 40.0%
AGCGTAAAATGCAACCATCA+TGG + chr5.4:19431499-19431518 None:intergenic 40.0%
AGCGTAACTTAAGTCACGTT+GGG + chr5.4:19426662-19426681 None:intergenic 40.0%
AGGCCAGTTATTAACTTCAC+AGG + chr5.4:19431450-19431469 None:intergenic 40.0%
AGTCACTTGTCAGTGGTTTA+TGG - chr5.4:19427359-19427378 MS.gene35272:intron 40.0%
AGTGATGATAGATACCGCAT+TGG + chr5.4:19431352-19431371 None:intergenic 40.0%
AGTTAACTGCCGCTGATATA+AGG + chr5.4:19426231-19426250 None:intergenic 40.0%
AGTTCGACTTAAGTCACGTA+GGG + chr5.4:19426570-19426589 None:intergenic 40.0%
ATTCGGCCTATATTTACGAC+TGG + chr5.4:19427518-19427537 None:intergenic 40.0%
CAACAACGAAGAACGAAATG+AGG - chr5.4:19428339-19428358 MS.gene35272:CDS 40.0%
CAAGGCCTTGAGAAAATCTA+TGG + chr5.4:19431427-19431446 None:intergenic 40.0%
CCTTGAGAAAATCTATGGCA+TGG + chr5.4:19431422-19431441 None:intergenic 40.0%
CGCATACATACACTATCTGT+TGG - chr5.4:19430887-19430906 MS.gene35272:intron 40.0%
CTAACCTTGCTCAATATCTG+TGG + chr5.4:19426058-19426077 None:intergenic 40.0%
CTCTTCTCTAACCACCAAAT+TGG + chr5.4:19430593-19430612 None:intergenic 40.0%
CTTCACATTGCAGTAAATGC+TGG - chr5.4:19427806-19427825 MS.gene35272:intron 40.0%
CTTGTTCCTGACACAATGAA+AGG + chr5.4:19429129-19429148 None:intergenic 40.0%
CTTTCATTGTGTCAGGAACA+AGG - chr5.4:19429127-19429146 MS.gene35272:CDS 40.0%
GAAAACTGGAACACTACCAA+GGG + chr5.4:19431589-19431608 None:intergenic 40.0%
GAAATACAAGACTGAAGTGG+CGG + chr5.4:19431376-19431395 None:intergenic 40.0%
GAGGTTACTCAAACTTTACC+CGG - chr5.4:19428282-19428301 MS.gene35272:CDS 40.0%
GATGCTAGGAGAATGAAAAC+TGG + chr5.4:19431603-19431622 None:intergenic 40.0%
GGAACACCTTAGAAGAAGAT+TGG + chr5.4:19430049-19430068 None:intergenic 40.0%
GGTGGAAACAATCAACAAAC+TGG - chr5.4:19431279-19431298 MS.gene35272:intron 40.0%
GTTAACTGCCGCTGATATAA+GGG + chr5.4:19426230-19426249 None:intergenic 40.0%
TAGCTTGAGTTAACTCATGC+AGG - chr5.4:19426599-19426618 MS.gene35272:intron 40.0%
TATGCCTCTACCACTGTTAT+CGG + chr5.4:19429349-19429368 None:intergenic 40.0%
TATGCTTGATATGCTAGAGG+TGG - chr5.4:19428255-19428274 MS.gene35272:CDS 40.0%
TCGGTGACTGAAAGTAGATA+AGG + chr5.4:19429330-19429349 None:intergenic 40.0%
TCTCTTTGTACTTGCAAAGC+AGG + chr5.4:19429540-19429559 None:intergenic 40.0%
TGAAAACTGGAACACTACCA+AGG + chr5.4:19431590-19431609 None:intergenic 40.0%
TGCTCATTCCCTTATATCAG+CGG - chr5.4:19426219-19426238 MS.gene35272:CDS 40.0%
TGCTGGAAACCTGAAAAATG+TGG - chr5.4:19427823-19427842 MS.gene35272:intron 40.0%
TGGAACAGACAGAGAAAAGA+AGG + chr5.4:19431479-19431498 None:intergenic 40.0%
TTAGACACATGGGATACAAG+TGG - chr5.4:19430831-19430850 MS.gene35272:intron 40.0%
TTAGTTCCTTCATCTATCCG+CGG - chr5.4:19429501-19429520 MS.gene35272:CDS 40.0%
TTGAATTAGCCAGCTATGCA+TGG - chr5.4:19427336-19427355 MS.gene35272:intron 40.0%
TTTCTCTGTCTGTTCCATGA+TGG - chr5.4:19431482-19431501 MS.gene35272:CDS 40.0%
! AGGGAGTAAGCAATTTTGGA+TGG + chr5.4:19426527-19426546 None:intergenic 40.0%
! CCATGCCATAGATTTTCTCA+AGG - chr5.4:19431419-19431438 MS.gene35272:intron 40.0%
! CTTTGGAGATTAGGAGAGAA+TGG - chr5.4:19429799-19429818 MS.gene35272:CDS 40.0%
! GGGAGTAAGCAATTTTGGAT+GGG + chr5.4:19426526-19426545 None:intergenic 40.0%
! GTTTGTTGATTGTTTCCACC+CGG + chr5.4:19431279-19431298 None:intergenic 40.0%
! TGCAAGGGAGTAAGCAATTT+TGG + chr5.4:19426531-19426550 None:intergenic 40.0%
! TGGAAATGTTGGTGAGAGAA+GGG - chr5.4:19427843-19427862 MS.gene35272:intron 40.0%
! TTTGTTGATTGTTTCCACCC+GGG + chr5.4:19431278-19431297 None:intergenic 40.0%
!! AAAATCACATTGGCTCTAGG+GGG - chr5.4:19431541-19431560 MS.gene35272:CDS 40.0%
!! AGCAAAATCACATTGGCTCT+AGG - chr5.4:19431538-19431557 MS.gene35272:CDS 40.0%
!! ATGCACACTTGTTGACTTCA+TGG - chr5.4:19430544-19430563 MS.gene35272:intron 40.0%
!! CAAAATCACATTGGCTCTAG+GGG - chr5.4:19431540-19431559 MS.gene35272:CDS 40.0%
!! GACACATAATTCTGGGGTAA+GGG + chr5.4:19426108-19426127 None:intergenic 40.0%
!! GCAAAATCACATTGGCTCTA+GGG - chr5.4:19431539-19431558 MS.gene35272:CDS 40.0%
!! GTTGTTGATTTCACCGTATG+AGG + chr5.4:19428326-19428345 None:intergenic 40.0%
!! TGAAGTATTTTGCAGGTTGG+AGG + chr5.4:19428438-19428457 None:intergenic 40.0%
!! TTAGATGGATTCTAAGGTGG+TGG + chr5.4:19430739-19430758 None:intergenic 40.0%
!! TTCTCTCAATGGATTGGAGA+AGG - chr5.4:19429419-19429438 MS.gene35272:CDS 40.0%
!!! TTTTTGGCTTCCTTGCACAT+CGG + chr5.4:19431105-19431124 None:intergenic 40.0%
AACACTACCAAGGGACAAGA+TGG + chr5.4:19431580-19431599 None:intergenic 45.0%
AATGTACTCTGCCTCACAAG+AGG - chr5.4:19430336-19430355 MS.gene35272:intron 45.0%
ACACTACCAAGGGACAAGAT+GGG + chr5.4:19431579-19431598 None:intergenic 45.0%
AGTTAACTGCCGCTGATACA+AGG - chr5.4:19426385-19426404 MS.gene35272:CDS 45.0%
ATACTTCGGCCGTGATACAT+CGG + chr5.4:19428135-19428154 None:intergenic 45.0%
ATCATGTGGACGACAGATTC+AGG - chr5.4:19427298-19427317 MS.gene35272:intron 45.0%
ATGAGAATGCACCAGTGTCA+CGG + chr5.4:19430393-19430412 None:intergenic 45.0%
ATGTTGTATGCTGCCCAGAA+TGG - chr5.4:19429267-19429286 MS.gene35272:intron 45.0%
ATTCTGGGCAGCATACAACA+TGG + chr5.4:19429268-19429287 None:intergenic 45.0%
CAACGTGACTTAAGTTACGC+TGG - chr5.4:19426661-19426680 MS.gene35272:intron 45.0%
CAGCGTAACTTAAGTCACGT+TGG + chr5.4:19426663-19426682 None:intergenic 45.0%
CTACGTGACTTAAGTCACGT+GGG - chr5.4:19426693-19426712 MS.gene35272:intron 45.0%
CTGCTGCAAACATGACAGTA+AGG + chr5.4:19431245-19431264 None:intergenic 45.0%
CTGTGGGATGTTATCAGTAC+TGG - chr5.4:19425949-19425968 MS.gene35272:CDS 45.0%
CTTGAAGGAAGCTGAGAAGA+TGG + chr5.4:19430270-19430289 None:intergenic 45.0%
CTTTCAGTCACCGATAACAG+TGG - chr5.4:19429336-19429355 MS.gene35272:intron 45.0%
GAGTTCGACTTAAGTCACGT+AGG + chr5.4:19426571-19426590 None:intergenic 45.0%
GCGCGAGAAACTCATAAGAT+AGG + chr5.4:19430805-19430824 None:intergenic 45.0%
GCTACCACAGATATTGAGCA+AGG - chr5.4:19426051-19426070 MS.gene35272:CDS 45.0%
GCTTCTTGACCGATGTATCA+CGG - chr5.4:19428123-19428142 MS.gene35272:CDS 45.0%
GTAAAATGTTGGTCAGCACC+TGG - chr5.4:19428837-19428856 MS.gene35272:intron 45.0%
GTGCAAGGAAGCCAAAAATG+AGG - chr5.4:19431107-19431126 MS.gene35272:intron 45.0%
GTTCGACTTAAGTCACGTAG+GGG + chr5.4:19426569-19426588 None:intergenic 45.0%
GTTTCAGCCCATGCTTCAAT+GGG - chr5.4:19426461-19426480 MS.gene35272:intron 45.0%
GTTTCCATTCCCCTTGCAAA+TGG - chr5.4:19428915-19428934 MS.gene35272:intron 45.0%
TAACAGTCGTTAACTGCTGC+TGG - chr5.4:19426267-19426286 MS.gene35272:CDS 45.0%
TGATTCTGCTGAGGCTTTCT+TGG - chr5.4:19425972-19425991 MS.gene35272:CDS 45.0%
TGTTTCAGCCCATGCTTCAA+TGG - chr5.4:19426460-19426479 MS.gene35272:intron 45.0%
TTCGACTTAAGTCACGTAGG+GGG + chr5.4:19426568-19426587 None:intergenic 45.0%
TTCTTAGAACACCGTGACAC+TGG - chr5.4:19430379-19430398 MS.gene35272:intron 45.0%
TTGTCAAAGGTGAGCACTTC+TGG + chr5.4:19425880-19425899 None:intergenic 45.0%
TTTACCGGCAGCCATATGAA+CGG + chr5.4:19428023-19428042 None:intergenic 45.0%
! ACAGTGGTAGAGGCATACTT+TGG - chr5.4:19429352-19429371 MS.gene35272:intron 45.0%
! ATATGCTAGAGGTGGCTTTG+AGG - chr5.4:19428263-19428282 MS.gene35272:CDS 45.0%
! CAAAGCACCAAGTTGCTCAT+GGG + chr5.4:19430206-19430225 None:intergenic 45.0%
! GTGGAAATGTTGGTGAGAGA+AGG - chr5.4:19427842-19427861 MS.gene35272:intron 45.0%
! TGAAGCGTATCTGAGATGCT+AGG + chr5.4:19431617-19431636 None:intergenic 45.0%
! TGTATCACGGCCGAAGTATT+TGG - chr5.4:19428136-19428155 MS.gene35272:CDS 45.0%
! TTTGAAACCATGAGGAAGCC+AGG + chr5.4:19428858-19428877 None:intergenic 45.0%
! TTTGAAATCAATGCAGGCGG+TGG - chr5.4:19431065-19431084 MS.gene35272:intron 45.0%
!! AAATCACATTGGCTCTAGGG+GGG - chr5.4:19431542-19431561 MS.gene35272:CDS 45.0%
!! AGTGTCACGGTGTTCTAAGA+AGG + chr5.4:19430380-19430399 None:intergenic 45.0%
!! GGACACATAATTCTGGGGTA+AGG + chr5.4:19426109-19426128 None:intergenic 45.0%
!! TCCATTGTGCTAGTCTTCGA+AGG - chr5.4:19430066-19430085 MS.gene35272:intron 45.0%
!! TGTTGACTTCATGGTAGACG+TGG - chr5.4:19430553-19430572 MS.gene35272:intron 45.0%
!! TTCTGGAACTATTCCAACCG+AGG + chr5.4:19425863-19425882 None:intergenic 45.0%
!! ATTAATAAAATAACAAATTA+AGG + chr5.4:19426130-19426149 None:intergenic 5.0%
!!! TTTTTTTCAAAAAATAAAAT+TGG + chr5.4:19426812-19426831 None:intergenic 5.0%
AACAGAGGCCCATTGAAGCA+TGG + chr5.4:19426472-19426491 None:intergenic 50.0%
AACTGGTACACCCATCTCCT+TGG - chr5.4:19431296-19431315 MS.gene35272:intron 50.0%
AATGGGCGGAGAGATTGTAG+AGG - chr5.4:19430937-19430956 MS.gene35272:intron 50.0%
ACAGAGGCCCATTGAAGCAT+GGG + chr5.4:19426471-19426490 None:intergenic 50.0%
AGTTGTGCATCCGATGTGCA+AGG - chr5.4:19431092-19431111 MS.gene35272:intron 50.0%
ATTAGGAGTGGACCAATGGG+CGG - chr5.4:19430923-19430942 MS.gene35272:intron 50.0%
CAAGTGACTCCATGCATAGC+TGG + chr5.4:19427348-19427367 None:intergenic 50.0%
CAGAGTGAGTTAACTCACGC+AGG - chr5.4:19426630-19426649 MS.gene35272:intron 50.0%
CAGCTTTCACTAGCTCCTCA+TGG + chr5.4:19431167-19431186 None:intergenic 50.0%
CATGAGGAGCTAGTGAAAGC+TGG - chr5.4:19431165-19431184 MS.gene35272:intron 50.0%
CCACGTGACTTAAGTCACGT+AGG + chr5.4:19426695-19426714 None:intergenic 50.0%
CCTACGTGACTTAAGTCACG+TGG - chr5.4:19426692-19426711 MS.gene35272:intron 50.0%
CTCAGATACGCTTCATCTCG+AGG - chr5.4:19431622-19431641 MS.gene35272:CDS 50.0%
GCCTTCGAAGACTAGCACAA+TGG + chr5.4:19430070-19430089 None:intergenic 50.0%
GGAACTATTCCAACCGAGGA+GGG + chr5.4:19425859-19425878 None:intergenic 50.0%
GGTTGGAGGAATCGTCTGTT+TGG + chr5.4:19428424-19428443 None:intergenic 50.0%
GTCACCGATAACAGTGGTAG+AGG - chr5.4:19429342-19429361 MS.gene35272:intron 50.0%
GTTCATATGGCTGCCGGTAA+AGG - chr5.4:19428022-19428041 MS.gene35272:CDS 50.0%
GTTTCCACCCGGGATAGTAA+AGG + chr5.4:19431268-19431287 None:intergenic 50.0%
TAGCGTCCTAGCTGAAGTAG+AGG + chr5.4:19427786-19427805 None:intergenic 50.0%
TCTACAATCTCTCCGCCCAT+TGG + chr5.4:19430938-19430957 None:intergenic 50.0%
TGCAGCAGCCTTTACTATCC+CGG - chr5.4:19431257-19431276 MS.gene35272:intron 50.0%
TGCATGGAGTCACTTGTCAG+TGG - chr5.4:19427352-19427371 MS.gene35272:intron 50.0%
TGGAACTATTCCAACCGAGG+AGG + chr5.4:19425860-19425879 None:intergenic 50.0%
TTACCGGCAGCCATATGAAC+GGG + chr5.4:19428022-19428041 None:intergenic 50.0%
! CAGAGAAAAGAAGGAGCGCA+AGG + chr5.4:19431470-19431489 None:intergenic 50.0%
! GCAAAGCACCAAGTTGCTCA+TGG + chr5.4:19430207-19430226 None:intergenic 50.0%
!! CAGTACTGGTGATTCTGCTG+AGG - chr5.4:19425963-19425982 MS.gene35272:CDS 50.0%
!! CTATTCAGGATGGTGGAGAG+AGG - chr5.4:19427710-19427729 MS.gene35272:intron 50.0%
AGCACCAAGTTGCTCATGGG+CGG + chr5.4:19430203-19430222 None:intergenic 55.0%
ATCTATCCGCGGTGGCAGAT+GGG - chr5.4:19429512-19429531 MS.gene35272:CDS 55.0%
CGGAGAACTCCCCGTTCATA+TGG - chr5.4:19428009-19428028 MS.gene35272:CDS 55.0%
CTAGGACCCATCTTGTCCCT+TGG - chr5.4:19431570-19431589 MS.gene35272:CDS 55.0%
GAAATCAATGCAGGCGGTGG+AGG - chr5.4:19431068-19431087 MS.gene35272:intron 55.0%
GCAGCAGCCTTTACTATCCC+GGG - chr5.4:19431258-19431277 MS.gene35272:intron 55.0%
GCGCGCCCTATTAGACACAT+GGG - chr5.4:19430821-19430840 MS.gene35272:intron 55.0%
GTTCCTTCATCTATCCGCGG+TGG - chr5.4:19429504-19429523 MS.gene35272:CDS 55.0%
TACCGGCAGCCATATGAACG+GGG + chr5.4:19428021-19428040 None:intergenic 55.0%
TTGCTCATGGGCGGAGCAAA+CGG + chr5.4:19430194-19430213 None:intergenic 55.0%
AACCGAGGAGGGAACACTCG+TGG + chr5.4:19425848-19425867 None:intergenic 60.0%
ACCTGATGGGGCAAGGTCTG+TGG - chr5.4:19425932-19425951 MS.gene35272:CDS 60.0%
ACGAGTGTTCCCTCCTCGGT+TGG - chr5.4:19425847-19425866 MS.gene35272:CDS 60.0%
AGCCACGAGTGTTCCCTCCT+CGG - chr5.4:19425843-19425862 MS.gene35272:CDS 60.0%
CATCTATCCGCGGTGGCAGA+TGG - chr5.4:19429511-19429530 MS.gene35272:CDS 60.0%
CCTGATGGGGCAAGGTCTGT+GGG - chr5.4:19425933-19425952 MS.gene35272:CDS 60.0%
CGCGCGCCCTATTAGACACA+TGG - chr5.4:19430820-19430839 MS.gene35272:intron 60.0%
CTCCCCGTTCATATGGCTGC+CGG - chr5.4:19428016-19428035 MS.gene35272:CDS 60.0%
CTGCCACCGCGGATAGATGA+AGG + chr5.4:19429510-19429529 None:intergenic 60.0%
GCAGCCTTTACTATCCCGGG+TGG - chr5.4:19431261-19431280 MS.gene35272:intron 60.0%
GTCAGCACCTGGCTTCCTCA+TGG - chr5.4:19428848-19428867 MS.gene35272:intron 60.0%
TCTATCCGCGGTGGCAGATG+GGG - chr5.4:19429513-19429532 MS.gene35272:CDS 60.0%
TGCTCCGCCCATGAGCAACT+TGG - chr5.4:19430196-19430215 MS.gene35272:CDS 60.0%
!! GGCTCTAGGGGGGTTGTTCT+AGG - chr5.4:19431552-19431571 MS.gene35272:CDS 60.0%
CCCACAGACCTTGCCCCATC+AGG + chr5.4:19425936-19425955 None:intergenic 65.0%
CAGGACCCCATCTGCCACCG+CGG + chr5.4:19429521-19429540 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 19425838 19431683 19425838 ID=MS.gene35272
chr5.4 mRNA 19425838 19431683 19425838 ID=MS.gene35272.t1;Parent=MS.gene35272
chr5.4 exon 19431449 19431683 19431449 ID=MS.gene35272.t1.exon1;Parent=MS.gene35272.t1
chr5.4 CDS 19431449 19431683 19431449 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19430102 19430317 19430102 ID=MS.gene35272.t1.exon2;Parent=MS.gene35272.t1
chr5.4 CDS 19430102 19430317 19430102 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19429364 19429846 19429364 ID=MS.gene35272.t1.exon3;Parent=MS.gene35272.t1
chr5.4 CDS 19429364 19429846 19429364 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19429055 19429249 19429055 ID=MS.gene35272.t1.exon4;Parent=MS.gene35272.t1
chr5.4 CDS 19429055 19429249 19429055 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19428615 19428794 19428615 ID=MS.gene35272.t1.exon5;Parent=MS.gene35272.t1
chr5.4 CDS 19428615 19428794 19428615 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19428456 19428518 19428456 ID=MS.gene35272.t1.exon6;Parent=MS.gene35272.t1
chr5.4 CDS 19428456 19428518 19428456 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19427946 19428379 19427946 ID=MS.gene35272.t1.exon7;Parent=MS.gene35272.t1
chr5.4 CDS 19427946 19428379 19427946 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
chr5.4 exon 19425838 19426440 19425838 ID=MS.gene35272.t1.exon8;Parent=MS.gene35272.t1
chr5.4 CDS 19425838 19426440 19425838 ID=cds.MS.gene35272.t1;Parent=MS.gene35272.t1
Gene Sequence

>MS.gene35272

ATGAAAGCCACGAGTGTTCCCTCCTCGGTTGGAATAGTTCCAGAAGTGCTCACCTTTGACAACTATGAAAGATGGAGTGTTCTTATGAAAAATTACCTGATGGGGCAAGGTCTGTGGGATGTTATCAGTACTGGTGATTCTGCTGAGGCTTTCTTGGAAGAGAATTCTGAAACATGGAGGCATTTGAGCAACAAAAAAGGCAAAAAGTTTGAAGCTACCACAGATATTGAGCAAGGTTAGTATCTAGTCTAATCTAAAAGTGGTAAACCCTTACCCCAGAATTATGTGTCCTTAATTTGTTATTTTATTAATAGTGTCCTTAATTTTTTTTTTAGGGAAGTGTCCTTACATTATTCAAAAATTAGTCCTCACTTATGAAATTGCTCATTCCCTTATATCAGCGGCAGTTAACTGTCGCTCGACATTTTTTAACAGTCGTTAACTGCTGCTGGCACTTTTAAAGTCGTTTAAACCGACTTAAAAAGTGATTGAACTGATCTTAAAAGTGTCAGCAACAGTTAATTGCCGCTTAAAATTGTCGAACGACAGTTAACTGCCGCTGATACAAGGAAATGATCAATATTAAAAGGGAGAAGAACAATTTTCAAATTATTCTTGTATGTGTTTCAGCCCATGCTTCAATGGGCCTCTGTTTTGTACTAAACTGTACGAAAATTGCTCTTCTCCCATCCAAAATTGCTTACTCCCTTGCAAATTGATGAAAATACCCCCTACGTGACTTAAGTCGAACTCCGTATTTTTAGCTTGAGTTAACTCATGCAGGTTATAACTCAGAGTGAGTTAACTCACGCAGGTTGTAGCCCAACGTGACTTAAGTTACGCTGGGTATAATGCCTACGTGACTTAAGTCACGTGGGAAGTATTTTCGTTAGTTTGTATGAGAATGAACAATTTTGGAAGAAGAACAATTTTTAAACTGAACTCCTCAATTTTTTTTAAAAAAATGAAGACCAATTTTATTTTTTGAAAAAAATTGTGAAGCCTAATTTGATTTTTGACAAAAATAAAAATAACTTTTGCTATGAATCCCTATCTTTGTCTTACATGAACCCCTATCATAAAAAGGACAATCTACTCTCTCCCCCTCTCTATCACCTAATTAAAAACATATTTGTCATCAATAATTCAAAATCAAGTATATTATATGAACCCCTAACATATTTATCATCATTATCCCTATGACATTGTTGATTTATCAAAAATGTTATTAATATTTAGATTCATTGCTAATCCAGAAACATAAAATTGTAAATGTCTCCAGAAATAATCATGTACACACATACTCTTTTTCCTGTAATATCTTTTGATTACAATGTAACGGATCGATATGGTAAATATTTCAAAGGACTCGTCGACGCTCACCAAAGTGTTTCTGAAGCTTATCAAAGAGAGGTTTCATTTAAGATAAAGAATGCAAAAGCTTTGCATATTATTCAACTATCATGTGGACGACAGATTCAGGATGAGCTTTGTCATTTTGAATTAGCCAGCTATGCATGGAGTCACTTGTCAGTGGTTTATGGCAAAACTTTAAAAATCAATCTAGATAAACTGCAGCACGGTATGTATTGAAATGTAAATATGTATCTGTTACTTCCTTCGATCCTATTTATAAGAAACAATTAATTTTTTAGATTCACTGTTTAATTGTTGTATCCAGTCGTAAATATAGGCCGAATACATCAACTAATTGATAAATCTAAAAAGTCGACTGTTTCTTATAAATAGGACCAAAAGGAGTATAATATAGAGAATATATATTGTACTGATTTTCCCTCCAATATAATATTTATGCATGTTTAAATGTAAATGGCAGATGATGATGATATAGTTAGTGTGAAACATAAAGAACTATTCAGGATGGTGGAGAGAGGTGATCCTATTGAAGATATCAAAATAGATCAGAATGTATATGATGATATAACCTCTACTTCAGCTAGGACGCTACTTCACATTGCAGTAAATGCTGGAAACCTGAAAAATGTGGAAATGTTGGTGAGAGAAGGGAGAGATGAGTTTGTAACAAAGCAAGATAGGTATGGGGACACAGCTCTTGCTCTTGCAGCTTATTATAATGCAAAAATAGATATAGTGAAGTGTCTGGTATATAGCAAAATGGGGGAGATGTTGCTGATGACACATAATACAAACGGAGAACTCCCCGTTCATATGGCTGCCGGTAAAGGACACAAAAAAATGACTGGTTTTCTTTACTCAAAAACTCCCGGAGAAGTGTTCAAAAAAGATTCACAAAATCGAGTTTTGCTTCTTGACCGATGTATCACGGCCGAAGTATTTGGTAAGCGAATTTAAAAGTTCCAATTGTGTTACAAGTTAAAGAACTAAATACAAAATTATGAAATACTTGCTTGAATTTCATTTTGACTTTTCAAATGTATGCTTGATATGCTAGAGGTGGCTTTGAGGTTACTCAAACTTTACCCGGATGATCTATTTCATGAAGCCTCATACGGTGAAATCAACAACGAAGAACGAAATGAGGAATCCAACAAATTCTCCACCTTAGTTTCATTGGCTAAATTTAAATTGCACCCTAATTTTCCAAACAGACGATTCCTCCAACCTGCAAAATACTTCATTTATAATCGTAAGTTTCCAAGCTAAGATTTACCTTTATTGTATGAAACGTCTAATATGGACCCGATTTAAAAGTGGATTTCACTATTACTAGTGGATTTTAATAAACTACTGTATTTTTCTTCATTTTTTGTTAATATAAAACTATTTTTCACTAAAATTGATATGGTTTAACCTTTGAATTATATTTTGAGAGGTTCATGTTAGAAACACAATTTATGTGTATCACACAATAATTCATCTGTTCCTAAAACAATTTTATTATTACAGATTTAAGCCTAAAACAATTTGAAGACAACTATGGGATTCCCGAATCCGAAATTTTAGAGTATATACGATTGATTTATGTCGATAGAAGTGTACATGCGACATCATCTTCTGTAAAATGTTGGTCAGCACCTGGCTTCCTCATGGTTTCAAAGTTTCTGTTTCTTCCTATAAAACTACTTGGTATGTTTGTTTCCATTCCCCTTGCAAATGGATTTGTTTATTTCATTTTTCGATATTTGTGTTTATTTTTACTGGATGATTTGTTGATTTGTGCAGATCGACTAATTCATAAATTTGCATACTTGTTGGTTGAAGTTTTCAAGTATCTAGATATCTTTGGTAAGCAATATTACTTTCATTTAATTTGATTTTCGGCAATGATTCATGTACTTATAAGTTCCTTTCATTGTGTCAGGAACAAGGGAAATATATGCAAGAAAATATACCTTATATGAAGTTGTGGGAATAATGAAATACTTGATCCAAAATCTTAAAGGATTTAATGGTTTAGGGCTCAGACAAGCTTCAGCACATGAAGCCATGTTGTATGCTGCCCAGAATGGAACGATTACATTGATAAATGCTATGAGGAATGCTAATCCTTATCTACTTTCAGTCACCGATAACAGTGGTAGAGGCATACTTTGGTATGCAATTCTGAAACGCAGAAGATATGTTTTCAAACTCATATATTCTCTCAATGGATTGGAGAAGGAGATGATTAAATATCGCACAGACTCGGTTGACAATAATCTGTTGCACATGGCAGCACTTTTAGTTCCTTCATCTATCCGCGGTGGCAGATGGGGTCCTGCTTTGCAAGTACAAAGAGAAATTCAATGGTTTAAGGTCATTTCTCTCATCTCTATCTATGATCTATCTATCTGTCTATCTATCTATCTATCTATAACGGGAACAAACTACAAAGCTAGTCGTGAGGTAAAAACACCTCTGATGTCTTGAATTAAAAGTAGATCAAGCAAAAGAAATATTGAATTGACAGAACAATTAACAGGTTTAGAACAATACTCTTGTATGAAAGTGATTTGGTGAAGAAAGAAAGTAATGAGAACTTTGGAGATTAGGAGAGAATGGAGATGATAAGAAATCCAATTTTTTATTGAATAATCGATCACATATTGATTTTTATGCGATTAGGGACTATTTATGAAACATGGGAATCAACAACTAACTAAAACTAAGTTGTAACTTGTAGCTTAAGTTACCTAACTAATATTTAGTTATTCAACTAGCAACCTTACTAACTTTGAATTATATCAACTAAAATCCTCAAATCAAGTTAGTTGTAAATACCATTACCAATCTTCTTCTAAGGTGTTCCATTGTGCTAGTCTTCGAAGGCTTTGTTAGCAAATCTGCAAGTTTCAAATCTGTCTTGCAATATTGCAGCTCCGATTTCTCCTTGCTTAATTGATCCCTTAGAAAATGAAACTTTGTTTCAATCCGTTTGCTCCGCCCATGAGCAACTTGGTGCTTTGCAAGATCAATTGATGAATTTCTATCTACTAGCAATATAAAGCCATCTTCTCAGCTTCCTTCAAGTTCATCTCTTCCATTAGAATGCTTAACATGCAACTATTGAAGTTGTAATGTACTCTGCCTCACAAGAGGATAAAGTTATTACTATTTCCTTCTTAGAACACCGTGACACTGGTGCATTCTCATACATCACATATGCACATTCCTTTTCCTATCATTTAAACTAACAACCTAACTAACTTTAAATTATATCAACTAATACAAATATATAGTAATCACATTCAAAGGGGTAGAGACACCCTTATTAGCTAGTAAATATGCACACTTGTTGACTTCATGGTAGACGTGGACAATAAAAGTTCTCCAATTTGGTGGTTAGAGAAGAGAAATGATATCATCATGAAGAGGTTGACGGAAACATATACGAGTCTTTTTAGAATTCACCATATCAACTACCACCTTAGAATCCATCTCAAAAATGATCTTAGAAAGTGATAATTCTTGAGCAACCACCACCTTAGAATCCATCTAAAAAAACGACATAAGAACGTGATAATTATTGGACCATTACTTTTCCTATCTTATGAGTTTCTCGCGCGCCCTATTAGACACATGGGATACAAGTGGCAATAACACACGACAATTAAATGGTGGGAAGTACGCATACATACACTATCTGTTGGAACAATATTTAAAATTAGGAGTGGACCAATGGGCGGAGAGATTGTAGAGGTTCTCAAGAAACATCATTATTTAAGATATTAGATTGCTTTATTGACACTTGCCAAAAATATTTTTTACAAGTGTTTTCTAATGTATGATATTAAGATTAAGATTGTTTGAAATCAATGCAGGCGGTGGAGGAAGTTGTGCATCCGATGTGCAAGGAAGCCAAAAATGAGGATGGTAAGAAGCCTTATGATGTATTCATTGAAAGCCATGAGGAGCTAGTGAAAGCTGGAGAAAAATGGACAAAAGACACAGCTAGTTGTTATATAGCTGTGGCTTCTCTCGTCCTTACTGTCATGTTTGCAGCAGCCTTTACTATCCCGGGTGGAAACAATCAACAAACTGGTACACCCATCTCCTTGGATCAAAATACATTTAAAATGTTTCTCTTAGCCAATGCGGTATCTATCATCACTTCCGCCACTTCAGTCTTGTATTTCATTTCGATTCTCACATCGAGTTGCCATGCCATAGATTTTCTCAAGGCCTTGCCTGTGAAGTTAATAACTGGCCTTGCGCTCCTTCTTTTCTCTGTCTGTTCCATGATGGTTGCATTTTACGCTGCGCTTAATATGATCTTAAAGCAAAATCACATTGGCTCTAGGGGGGTTGTTCTAGGACCCATCTTGTCCCTTGGTAGTGTTCCAGTTTTCATTCTCCTAGCATCTCAGATACGCTTCATCTCGAGGATTTTATATTCTACAATGAAAAATCGCATTAAGGGATGA
Protein sequence

>MS.gene35272.t1

MKATSVPSSVGIVPEVLTFDNYERWSVLMKNYLMGQGLWDVISTGDSAEAFLEENSETWRHLSNKKGKKFEATTDIEQGLVDAHQSVSEAYQREVSFKIKNAKALHIIQLSCGRQIQDELCHFELASYAWSHLSVVYGKTLKINLDKLQHDDDDIVSVKHKELFRMVERGDPIEDIKIDQNVYDDITSTSARTLLHIAVNAGNLKNVEMLVREGRDEFVTKQDRYGDTALALAAYYNAKIDIVKCLVYSKMGEMLLMTHNTNGELPVHMAAGKGHKKMTGFLYSKTPGEVFKKDSQNRVLLLDRCITAEVFEVALRLLKLYPDDLFHEASYGEINNEERNEESNKFSTLVSLAKFKLHPNFPNRRFLQPAKYFIYNHLSLKQFEDNYGIPESEILEYIRLIYVDRSVHATSSSVKCWSAPGFLMVSKFLFLPIKLLDRLIHKFAYLLVEVFKYLDIFGTREIYARKYTLYEVVGIMKYLIQNLKGFNGLGLRQASAHEAMLYAAQNGTITLINAMRNANPYLLSVTDNSGRGILWYAILKRRRYVFKLIYSLNGLEKEMIKYRTDSVDNNLLHMAALLVPSSIRGGRWGPALQVQREIQWFKAVEEVVHPMCKEAKNEDGKKPYDVFIESHEELVKAGEKWTKDTASCYIAVASLVLTVMFAAAFTIPGGNNQQTGTPISLDQNTFKMFLLANAVSIITSATSVLYFISILTSSCHAIDFLKALPVKLITGLALLLFSVCSMMVAFYAALNMILKQNHIGSRGVVLGPILSLGSVPVFILLASQIRFISRILYSTMKNRIKG