Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35570.t1 | XP_013460928.1 | 97.3 | 622 | 15 | 1 | 1 | 620 | 1 | 622 | 0.00E+00 | 1280 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35570.t1 | Q5MAU8 | 72.8 | 611 | 162 | 3 | 10 | 620 | 4 | 610 | 1.1e-275 | 950.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35570.t1 | A0A072UZJ4 | 97.3 | 622 | 15 | 1 | 1 | 620 | 1 | 622 | 0.0e+00 | 1280.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35570 | MS.gene69485 | PPI |
MS.gene35570 | MS.gene054724 | PPI |
MS.gene35570 | MS.gene98060 | PPI |
MS.gene35570 | MS.gene063970 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35570.t1 | MTR_3g074930 | 97.267 | 622 | 15 | 1 | 1 | 620 | 1 | 622 | 0.0 | 1264 |
MS.gene35570.t1 | MTR_3g074930 | 96.184 | 629 | 15 | 2 | 1 | 620 | 1 | 629 | 0.0 | 1258 |
MS.gene35570.t1 | MTR_4g103520 | 77.435 | 616 | 134 | 1 | 10 | 620 | 11 | 626 | 0.0 | 1032 |
MS.gene35570.t1 | MTR_4g103520 | 80.146 | 549 | 109 | 0 | 72 | 620 | 1 | 549 | 0.0 | 955 |
MS.gene35570.t1 | MTR_5g045600 | 71.939 | 588 | 164 | 1 | 33 | 620 | 32 | 618 | 0.0 | 906 |
MS.gene35570.t1 | MTR_8g063080 | 69.130 | 609 | 183 | 2 | 12 | 620 | 8 | 611 | 0.0 | 902 |
MS.gene35570.t1 | MTR_3g074970 | 84.076 | 471 | 30 | 2 | 149 | 619 | 100 | 525 | 0.0 | 819 |
MS.gene35570.t1 | MTR_3g074970 | 96.875 | 96 | 3 | 0 | 518 | 613 | 3 | 98 | 4.24e-55 | 196 |
MS.gene35570.t1 | MTR_3g074960 | 71.687 | 498 | 75 | 5 | 1 | 475 | 1 | 455 | 0.0 | 702 |
MS.gene35570.t1 | MTR_4g037670 | 36.014 | 572 | 308 | 16 | 68 | 601 | 83 | 634 | 2.41e-110 | 345 |
MS.gene35570.t1 | MTR_1g052505 | 35.714 | 560 | 303 | 17 | 81 | 601 | 74 | 615 | 3.54e-105 | 331 |
MS.gene35570.t1 | MTR_4g082930 | 29.256 | 605 | 349 | 25 | 45 | 599 | 5 | 580 | 6.32e-59 | 209 |
MS.gene35570.t1 | MTR_4g082940 | 28.242 | 563 | 314 | 23 | 86 | 599 | 45 | 566 | 2.07e-51 | 188 |
MS.gene35570.t1 | MTR_6g005650 | 82.051 | 78 | 14 | 0 | 190 | 267 | 10 | 87 | 1.27e-37 | 142 |
MS.gene35570.t1 | MTR_1g060360 | 27.361 | 413 | 230 | 15 | 190 | 594 | 57 | 407 | 9.86e-30 | 122 |
MS.gene35570.t1 | MTR_7g104330 | 26.392 | 413 | 226 | 15 | 190 | 590 | 65 | 411 | 5.99e-29 | 120 |
MS.gene35570.t1 | MTR_7g104360 | 26.161 | 409 | 233 | 14 | 190 | 590 | 58 | 405 | 5.16e-28 | 117 |
MS.gene35570.t1 | MTR_4g115670 | 26.374 | 455 | 271 | 16 | 168 | 603 | 42 | 451 | 1.02e-26 | 114 |
MS.gene35570.t1 | MTR_3g051240 | 25.986 | 431 | 247 | 14 | 190 | 614 | 54 | 418 | 3.52e-25 | 108 |
MS.gene35570.t1 | MTR_6g013050 | 27.053 | 414 | 186 | 16 | 247 | 590 | 146 | 513 | 1.67e-24 | 108 |
MS.gene35570.t1 | MTR_6g013050 | 28.097 | 331 | 166 | 11 | 247 | 548 | 146 | 433 | 5.53e-23 | 103 |
MS.gene35570.t1 | MTR_5g092360 | 24.390 | 451 | 263 | 17 | 174 | 614 | 42 | 424 | 2.78e-22 | 100 |
MS.gene35570.t1 | MTR_7g056403 | 27.879 | 330 | 167 | 10 | 247 | 548 | 146 | 432 | 3.32e-22 | 101 |
MS.gene35570.t1 | MTR_0188s0020 | 25.824 | 364 | 223 | 13 | 247 | 596 | 119 | 449 | 2.22e-21 | 98.2 |
MS.gene35570.t1 | MTR_3g083810 | 24.235 | 425 | 208 | 14 | 247 | 601 | 147 | 527 | 6.39e-21 | 97.1 |
MS.gene35570.t1 | MTR_3g083820 | 25.982 | 331 | 172 | 11 | 247 | 548 | 147 | 433 | 1.52e-19 | 92.8 |
MS.gene35570.t1 | MTR_1g112630 | 24.821 | 419 | 249 | 19 | 191 | 591 | 70 | 440 | 2.13e-19 | 92.0 |
MS.gene35570.t1 | MTR_4g037105 | 25.843 | 356 | 223 | 15 | 247 | 591 | 113 | 438 | 3.70e-19 | 91.3 |
MS.gene35570.t1 | MTR_7g405800 | 93.333 | 30 | 2 | 0 | 233 | 262 | 1 | 30 | 4.81e-14 | 72.4 |
MS.gene35570.t1 | MTR_2g020270 | 69.767 | 43 | 13 | 0 | 120 | 162 | 33 | 75 | 7.02e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35570.t1 | AT5G50400 | 72.831 | 611 | 162 | 3 | 10 | 620 | 4 | 610 | 0.0 | 944 |
MS.gene35570.t1 | AT4G24890 | 72.697 | 597 | 162 | 1 | 24 | 620 | 19 | 614 | 0.0 | 926 |
MS.gene35570.t1 | AT1G13750 | 66.174 | 609 | 205 | 1 | 12 | 620 | 5 | 612 | 0.0 | 863 |
MS.gene35570.t1 | AT5G50400 | 77.220 | 518 | 117 | 1 | 103 | 620 | 22 | 538 | 0.0 | 862 |
MS.gene35570.t1 | AT1G13900 | 30.066 | 602 | 322 | 27 | 51 | 599 | 22 | 577 | 2.76e-59 | 210 |
MS.gene35570.t1 | AT2G03450 | 29.180 | 610 | 329 | 26 | 46 | 599 | 15 | 577 | 2.01e-58 | 207 |
MS.gene35570.t1 | AT3G52780 | 26.682 | 431 | 242 | 16 | 173 | 590 | 36 | 405 | 2.88e-28 | 118 |
MS.gene35570.t1 | AT3G52810 | 26.364 | 440 | 247 | 18 | 161 | 590 | 36 | 408 | 3.89e-26 | 112 |
MS.gene35570.t1 | AT3G52820 | 27.689 | 437 | 245 | 19 | 161 | 590 | 32 | 404 | 4.83e-25 | 108 |
MS.gene35570.t1 | AT4G13700 | 27.576 | 330 | 169 | 12 | 247 | 548 | 140 | 427 | 3.01e-24 | 106 |
MS.gene35570.t1 | AT3G52780 | 28.367 | 349 | 195 | 13 | 173 | 514 | 36 | 336 | 4.62e-24 | 104 |
MS.gene35570.t1 | AT5G34850 | 25.745 | 369 | 232 | 12 | 247 | 603 | 112 | 450 | 8.11e-23 | 102 |
MS.gene35570.t1 | AT3G20500 | 29.348 | 276 | 167 | 9 | 321 | 590 | 150 | 403 | 1.31e-22 | 101 |
MS.gene35570.t1 | AT2G27190 | 26.648 | 364 | 210 | 13 | 247 | 591 | 118 | 443 | 3.16e-22 | 100 |
MS.gene35570.t1 | AT4G36350 | 25.137 | 366 | 214 | 13 | 247 | 592 | 114 | 439 | 1.29e-21 | 99.0 |
MS.gene35570.t1 | AT1G56360 | 23.741 | 417 | 260 | 16 | 192 | 592 | 65 | 439 | 1.21e-20 | 95.9 |
MS.gene35570.t1 | AT3G07130 | 25.455 | 330 | 175 | 10 | 247 | 548 | 140 | 426 | 7.84e-20 | 93.6 |
MS.gene35570.t1 | AT4G13700 | 27.491 | 291 | 151 | 11 | 247 | 509 | 140 | 398 | 1.92e-19 | 91.7 |
MS.gene35570.t1 | AT2G18130 | 26.429 | 280 | 177 | 10 | 339 | 603 | 168 | 433 | 5.49e-16 | 81.3 |
MS.gene35570.t1 | AT3G07130 | 24.832 | 298 | 163 | 9 | 247 | 516 | 140 | 404 | 1.89e-15 | 80.1 |
MS.gene35570.t1 | AT2G32770 | 22.170 | 424 | 201 | 16 | 247 | 590 | 149 | 523 | 3.48e-14 | 76.3 |
MS.gene35570.t1 | AT2G32770 | 23.631 | 347 | 171 | 14 | 247 | 548 | 68 | 365 | 1.71e-13 | 73.6 |
Find 162 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGATGCATTTACCTTTAT+TGG | 0.115393 | 3.3:-64550091 | None:intergenic |
TTTCAAGATAAACATGATTT+TGG | 0.169428 | 3.3:+64546562 | MS.gene35570:CDS |
TTGCAGCGTGTTATCATATT+TGG | 0.181117 | 3.3:+64551242 | MS.gene35570:CDS |
AGTATTTATACCTGATAAAT+AGG | 0.182135 | 3.3:-64552459 | None:intergenic |
TATTTGGCCAAAGTTCTTTA+AGG | 0.186309 | 3.3:-64551016 | None:intergenic |
TACCTTAATGCCAAGCAAAA+AGG | 0.222836 | 3.3:-64546720 | None:intergenic |
TCACAACAGCACCTCCTATT+TGG | 0.224450 | 3.3:+64552663 | MS.gene35570:CDS |
CAGTCTTCATTAGTTGGTTC+TGG | 0.230728 | 3.3:-64548913 | None:intergenic |
TAATATAACTCACCAGAATT+TGG | 0.238636 | 3.3:-64551800 | None:intergenic |
GAGATGCATTTACCTTTATT+GGG | 0.268683 | 3.3:-64550090 | None:intergenic |
TGTATCTGCTTTCCACCCTT+TGG | 0.273229 | 3.3:-64550748 | None:intergenic |
TGCAGGTATGCAACAGATTA+TGG | 0.280718 | 3.3:+64552156 | MS.gene35570:intron |
CTGAATGCGTACCTCATATT+TGG | 0.281305 | 3.3:-64551032 | None:intergenic |
GCGAACCTTGCTATCATATA+TGG | 0.299475 | 3.3:-64551570 | None:intergenic |
GTATCTGCTTTCCACCCTTT+GGG | 0.300850 | 3.3:-64550747 | None:intergenic |
ATTGGGGCTGAGCATGTATA+TGG | 0.313154 | 3.3:-64550073 | None:intergenic |
CACAAACTTGAGGATGGGTT+TGG | 0.313558 | 3.3:+64546601 | MS.gene35570:CDS |
CTCTCCCTTGCCACCGGGGT+TGG | 0.316930 | 3.3:-64550047 | None:intergenic |
TTCTATGACACTCCAGATTC+AGG | 0.324023 | 3.3:+64551721 | MS.gene35570:CDS |
TATCTGATGGTTCTTATGTA+TGG | 0.326736 | 3.3:+64551171 | MS.gene35570:CDS |
TCTCCCTTGCCACCGGGGTT+GGG | 0.338937 | 3.3:-64550046 | None:intergenic |
GGCACACTCTTTCATAGTTA+TGG | 0.347057 | 3.3:-64552437 | None:intergenic |
CGCGGATATACAGGTGCTTT+AGG | 0.348283 | 3.3:-64550474 | None:intergenic |
TTGGGTGATATGAATGGAAT+TGG | 0.353720 | 3.3:+64546620 | MS.gene35570:CDS |
ATATGTTACTTCAAGTTTGC+AGG | 0.354348 | 3.3:-64548952 | None:intergenic |
CCACATTCTCCACCTGAATC+TGG | 0.355363 | 3.3:-64551733 | None:intergenic |
AGCTGTACCATTCGTGGAAT+GGG | 0.357959 | 3.3:+64550723 | MS.gene35570:CDS |
CTGCACGCTGATTGATCAAT+TGG | 0.365926 | 3.3:-64550251 | None:intergenic |
AGTCTTCATTAGTTGGTTCT+GGG | 0.366107 | 3.3:-64548912 | None:intergenic |
CATGGGAAGGGAAAGTTTGC+AGG | 0.381419 | 3.3:+64552368 | MS.gene35570:CDS |
CATTACTCTGGCACTGTGAA+TGG | 0.385329 | 3.3:+64552593 | MS.gene35570:CDS |
AAGAGTGTGCCCTATTTATC+AGG | 0.390964 | 3.3:+64552449 | MS.gene35570:CDS |
ACCGTTGGTTGGCGTGATCC+TGG | 0.393330 | 3.3:+64550975 | MS.gene35570:CDS |
CAAGTTTCCTTAAAGAACTT+TGG | 0.396795 | 3.3:+64551009 | MS.gene35570:CDS |
ACAAACTTGAGGATGGGTTT+GGG | 0.396830 | 3.3:+64546602 | MS.gene35570:CDS |
CTGAGAACAAAGCCAAATTC+TGG | 0.397715 | 3.3:+64551788 | MS.gene35570:CDS |
CACGTTGTTGTCGGCGGAGG+GGG | 0.400892 | 3.3:+64552623 | MS.gene35570:CDS |
TCATAGAAGGATCCTGAGTT+TGG | 0.403373 | 3.3:-64551706 | None:intergenic |
TACATGCTCAGCCCCAATAA+AGG | 0.410712 | 3.3:+64550078 | MS.gene35570:CDS |
CCAACCCAGTCTTCATTAGT+TGG | 0.419485 | 3.3:-64548919 | None:intergenic |
CTGCAAACTTTCCCTTCCCA+TGG | 0.420595 | 3.3:-64552367 | None:intergenic |
TCCCTGAAAATACTCCAAAT+AGG | 0.422376 | 3.3:-64552677 | None:intergenic |
AAGAACTTTGGCCAAATATG+AGG | 0.423481 | 3.3:+64551021 | MS.gene35570:CDS |
ATCTCTATAGTCCCTGGAAA+TGG | 0.436173 | 3.3:-64552798 | None:intergenic |
AATTTGGCTTTGTTCTCAGC+AGG | 0.439009 | 3.3:-64551784 | None:intergenic |
CCCAGGTACACCTACAGGTT+AGG | 0.439864 | 3.3:+64551140 | MS.gene35570:intron |
CTTGGCATACCAATCATTAG+AGG | 0.440011 | 3.3:-64552325 | None:intergenic |
TGAGCAAGGCGCGGATATAC+AGG | 0.446591 | 3.3:-64550483 | None:intergenic |
GGGAAAGTTTGCAGGGACTT+TGG | 0.448457 | 3.3:+64552376 | MS.gene35570:CDS |
TGAATCTGGAGTGTCATAGA+AGG | 0.450964 | 3.3:-64551719 | None:intergenic |
TGGTATCTCTCCCTTGCCAC+CGG | 0.453388 | 3.3:-64550053 | None:intergenic |
GGAACAATTCACGTTGTTGT+CGG | 0.459354 | 3.3:+64552614 | MS.gene35570:CDS |
CTCAGCAGGGTAATAGTACA+TGG | 0.467918 | 3.3:-64551770 | None:intergenic |
GTTCTTATGTATGGAGTAAG+AGG | 0.471018 | 3.3:+64551180 | MS.gene35570:CDS |
TTCAAGGCATCTCCATATCC+TGG | 0.471056 | 3.3:+64551209 | MS.gene35570:CDS |
CTCTTGAAATGAACCCTCCT+TGG | 0.472869 | 3.3:-64552343 | None:intergenic |
AAGTGAACCAGGTTGGTAAT+CGG | 0.475132 | 3.3:-64551409 | None:intergenic |
TTCGTGGAATGGGGCCCAAA+GGG | 0.477423 | 3.3:+64550733 | MS.gene35570:CDS |
GGTATCTCTCCCTTGCCACC+GGG | 0.477662 | 3.3:-64550052 | None:intergenic |
ATACTTTGGATTGGAGTGGT+TGG | 0.479524 | 3.3:-64550199 | None:intergenic |
GTTCTTCAGGCGGAGCGTGA+TGG | 0.480034 | 3.3:+64551372 | MS.gene35570:intron |
CAGGGACTATAGAGATGTCT+TGG | 0.482107 | 3.3:+64552805 | MS.gene35570:CDS |
AAGTGAAGCTGTACCATTCG+TGG | 0.486057 | 3.3:+64550717 | MS.gene35570:CDS |
TTAGGGCATTTCCTATCTGA+TGG | 0.486535 | 3.3:+64551158 | MS.gene35570:CDS |
GTATATCCGCGCCTTGCTCA+TGG | 0.487526 | 3.3:+64550486 | MS.gene35570:CDS |
TCGGTTACTCCTCTAATGAT+TGG | 0.490311 | 3.3:+64552316 | MS.gene35570:CDS |
CAAGAAAAGTAGTGATGGAA+AGG | 0.490848 | 3.3:+64552760 | MS.gene35570:CDS |
AAGCTGTACCATTCGTGGAA+TGG | 0.491248 | 3.3:+64550722 | MS.gene35570:CDS |
GTATTTATACCTGATAAATA+GGG | 0.494603 | 3.3:-64552458 | None:intergenic |
CAGAAATATAAAGTAGACAT+TGG | 0.495478 | 3.3:+64552399 | MS.gene35570:CDS |
ATTCACGTTGTTGTCGGCGG+AGG | 0.497357 | 3.3:+64552620 | MS.gene35570:CDS |
CAGAACCAACTAATGAAGAC+TGG | 0.498767 | 3.3:+64548914 | MS.gene35570:CDS |
TTCTTCACAAACTTGAGGAT+GGG | 0.502726 | 3.3:+64546596 | MS.gene35570:CDS |
TTCACGTTGTTGTCGGCGGA+GGG | 0.503739 | 3.3:+64552621 | MS.gene35570:CDS |
GGAGATCTGCCATATGCAAA+TGG | 0.505321 | 3.3:+64551489 | MS.gene35570:CDS |
AGCAAGAATGGTCTTGTGAA+TGG | 0.506048 | 3.3:-64546666 | None:intergenic |
ATGGGTTTGGGTGATATGAA+TGG | 0.507250 | 3.3:+64546614 | MS.gene35570:CDS |
TGTCTAGATCATTGATGAGC+TGG | 0.510281 | 3.3:-64551443 | None:intergenic |
TGCAAACTTTCCCTTCCCAT+GGG | 0.510474 | 3.3:-64552366 | None:intergenic |
TGAATGGCAATCTTTGACAA+TGG | 0.514640 | 3.3:-64546650 | None:intergenic |
TACACCCAACCCCGGTGGCA+AGG | 0.517148 | 3.3:+64550042 | MS.gene35570:CDS |
TTTCTTCACAAACTTGAGGA+TGG | 0.517931 | 3.3:+64546595 | MS.gene35570:CDS |
AGAACTGTGGAGAGCAAGAA+TGG | 0.517978 | 3.3:-64546678 | None:intergenic |
ATACATAAGAACCATCAGAT+AGG | 0.518022 | 3.3:-64551169 | None:intergenic |
GAGTAAGAGGTATTCATTCA+AGG | 0.520098 | 3.3:+64551193 | MS.gene35570:CDS |
TTCGAAATTGCCACAAGTCT+AGG | 0.523478 | 3.3:-64550432 | None:intergenic |
GTGGAAATCATGAACGTGAT+TGG | 0.524304 | 3.3:+64551683 | MS.gene35570:intron |
CCAGGTACACCTACAGGTTA+GGG | 0.524336 | 3.3:+64551141 | MS.gene35570:intron |
AAGCAGATACAATCTGCTGC+TGG | 0.527038 | 3.3:+64550760 | MS.gene35570:CDS |
GCCTTGCTCATGGAAAATCT+TGG | 0.534991 | 3.3:+64550496 | MS.gene35570:CDS |
TGTTATCATATTTGGTGACA+TGG | 0.540361 | 3.3:+64551250 | MS.gene35570:CDS |
TAATAGTACATGGTTTCTGC+AGG | 0.541874 | 3.3:-64551760 | None:intergenic |
CCAGATTCAGGTGGAGAATG+TGG | 0.543017 | 3.3:+64551733 | MS.gene35570:CDS |
AACCTGCGCGAACCGTTGGT+TGG | 0.545040 | 3.3:+64550964 | MS.gene35570:CDS |
GTGGAATGGGGCCCAAAGGG+TGG | 0.547755 | 3.3:+64550736 | MS.gene35570:CDS |
GTCTTCATTAGTTGGTTCTG+GGG | 0.549003 | 3.3:-64548911 | None:intergenic |
TTTGGGCCCCATTCCACGAA+TGG | 0.553417 | 3.3:-64550730 | None:intergenic |
GGGTTCATTTCAAGAGCCCA+TGG | 0.554005 | 3.3:+64552350 | MS.gene35570:CDS |
GTCTTGGCCTGTGTGCATGA+TGG | 0.554283 | 3.3:+64552821 | MS.gene35570:CDS |
CATATTTGGTGACATGGGAA+AGG | 0.554850 | 3.3:+64551256 | MS.gene35570:CDS |
CTCTAATGATTGGTATGCCA+AGG | 0.554950 | 3.3:+64552326 | MS.gene35570:CDS |
ACACCCAACCCCGGTGGCAA+GGG | 0.555681 | 3.3:+64550043 | MS.gene35570:CDS |
TATGTCATATCCACTTGTCC+AGG | 0.562397 | 3.3:-64550695 | None:intergenic |
TAGCAGACAGTGAACATGAC+TGG | 0.563197 | 3.3:+64552196 | MS.gene35570:CDS |
ATTTCAAGAGCCCATGGGAA+GGG | 0.565074 | 3.3:+64552356 | MS.gene35570:CDS |
CGCCAACCAACGGTTCGCGC+AGG | 0.566020 | 3.3:-64550966 | None:intergenic |
GAGATGTATCCATTTGCATA+TGG | 0.566529 | 3.3:-64551498 | None:intergenic |
CAAGACATCTCTATAGTCCC+TGG | 0.567071 | 3.3:-64552804 | None:intergenic |
GAACGTGATTGGCCAAACTC+AGG | 0.567592 | 3.3:+64551694 | MS.gene35570:CDS |
ATTCGTGGAATGGGGCCCAA+AGG | 0.569815 | 3.3:+64550732 | MS.gene35570:CDS |
AATGACAGATGACAGTTACC+TGG | 0.569926 | 3.3:+64550677 | MS.gene35570:intron |
GAATATGCCGATTACCAACC+TGG | 0.571062 | 3.3:+64551402 | MS.gene35570:CDS |
GGTGAACCTGCGCGAACCGT+TGG | 0.574966 | 3.3:+64550960 | MS.gene35570:intron |
AGATGCATTTACCTTTATTG+GGG | 0.582539 | 3.3:-64550089 | None:intergenic |
GTTATCATATTTGGTGACAT+GGG | 0.582757 | 3.3:+64551251 | MS.gene35570:CDS |
TCACGTTGTTGTCGGCGGAG+GGG | 0.582788 | 3.3:+64552622 | MS.gene35570:CDS |
AGTGAACATGACTGGAGAGA+AGG | 0.583434 | 3.3:+64552204 | MS.gene35570:CDS |
GAGTACAAGAAAAGTAGTGA+TGG | 0.585752 | 3.3:+64552755 | MS.gene35570:CDS |
ATGACAGTTACCTGGACAAG+TGG | 0.589057 | 3.3:+64550685 | MS.gene35570:CDS |
ACCAGGATCACGCCAACCAA+CGG | 0.589362 | 3.3:-64550976 | None:intergenic |
AGAATGGGTGACAGTAGAAG+TGG | 0.592801 | 3.3:+64548885 | MS.gene35570:CDS |
CATTTCAAGAGCCCATGGGA+AGG | 0.593257 | 3.3:+64552355 | MS.gene35570:CDS |
CCAACTAATGAAGACTGGGT+TGG | 0.597652 | 3.3:+64548919 | MS.gene35570:CDS |
TTCAATCGTAACAGCTTGTG+TGG | 0.602832 | 3.3:+64550793 | MS.gene35570:CDS |
TCCACCTGAAAATAGTGCAA+AGG | 0.604263 | 3.3:-64550280 | None:intergenic |
TTTGCAGCACATCGCCCACT+CGG | 0.606514 | 3.3:+64552297 | MS.gene35570:CDS |
CATATGGCAGATCTCCTATG+TGG | 0.608314 | 3.3:-64551482 | None:intergenic |
CTGAAAATACTCCAAATAGG+AGG | 0.610154 | 3.3:-64552674 | None:intergenic |
AGTATTGCAGCCTAGACTTG+TGG | 0.611224 | 3.3:+64550422 | MS.gene35570:intron |
CTCACAACCATCATGCACAC+AGG | 0.611589 | 3.3:-64552828 | None:intergenic |
GCAGGGTGAGGATACAGAAT+GGG | 0.612759 | 3.3:+64548870 | MS.gene35570:intron |
GGTTCATTTCAAGAGCCCAT+GGG | 0.615886 | 3.3:+64552351 | MS.gene35570:CDS |
TGTGTTTCTTCACAAACTTG+AGG | 0.618013 | 3.3:+64546591 | MS.gene35570:CDS |
ACAATTCACGTTGTTGTCGG+CGG | 0.619258 | 3.3:+64552617 | MS.gene35570:CDS |
ACATGACTGGAGAGAAGGAT+CGG | 0.623007 | 3.3:+64552209 | MS.gene35570:CDS |
GCTGTACCATTCGTGGAATG+GGG | 0.624816 | 3.3:+64550724 | MS.gene35570:CDS |
AATGATTGGTATGCCAAGGA+GGG | 0.625443 | 3.3:+64552330 | MS.gene35570:CDS |
AAGTTCCATATATGATAGCA+AGG | 0.626247 | 3.3:+64551565 | MS.gene35570:CDS |
ATTTGGCTTTGTTCTCAGCA+GGG | 0.626371 | 3.3:-64551783 | None:intergenic |
TAATGATTGGTATGCCAAGG+AGG | 0.627561 | 3.3:+64552329 | MS.gene35570:CDS |
AAACTTGTGTGTATAAAACC+AGG | 0.627608 | 3.3:-64550993 | None:intergenic |
ATGGGAAGGGAAAGTTTGCA+GGG | 0.630231 | 3.3:+64552369 | MS.gene35570:CDS |
AGAACCAACTAATGAAGACT+GGG | 0.631293 | 3.3:+64548915 | MS.gene35570:CDS |
TAGGAAATGCCCTAACCTGT+AGG | 0.633482 | 3.3:-64551150 | None:intergenic |
TCAGTGGTGTTAAGTGAACC+AGG | 0.637131 | 3.3:-64551420 | None:intergenic |
TATGACACTCCAGATTCAGG+TGG | 0.641435 | 3.3:+64551724 | MS.gene35570:CDS |
CATAATTCAGAGTGCCAAGG+TGG | 0.646773 | 3.3:-64552855 | None:intergenic |
TAGATAGAAAACAACAACCA+TGG | 0.654457 | 3.3:+64552268 | MS.gene35570:CDS |
AAATGGATACATCTCACAGT+GGG | 0.656289 | 3.3:+64551506 | MS.gene35570:CDS |
TGGTGTTAAGTGAACCAGGT+TGG | 0.659309 | 3.3:-64551416 | None:intergenic |
ATCATTGATGAGCTGGTCAG+TGG | 0.660666 | 3.3:-64551436 | None:intergenic |
CAGTAATGGATGCAGAACTG+TGG | 0.663466 | 3.3:-64546691 | None:intergenic |
TCAATATGTACACCCAACCC+CGG | 0.665070 | 3.3:+64550034 | MS.gene35570:CDS |
ACACATAATTCAGAGTGCCA+AGG | 0.668389 | 3.3:-64552858 | None:intergenic |
TGCAGGGTGAGGATACAGAA+TGG | 0.675793 | 3.3:+64548869 | MS.gene35570:intron |
GTATCTCTCCCTTGCCACCG+GGG | 0.686065 | 3.3:-64550051 | None:intergenic |
CATTAGAGGAGTAACCGAGT+GGG | 0.692825 | 3.3:-64552311 | None:intergenic |
TCATTAGAGGAGTAACCGAG+TGG | 0.714971 | 3.3:-64552312 | None:intergenic |
CAAATGGATACATCTCACAG+TGG | 0.732996 | 3.3:+64551505 | MS.gene35570:CDS |
TGTGCTGCAAAGATTAACCA+TGG | 0.735965 | 3.3:-64552285 | None:intergenic |
ATATGTACACCCAACCCCGG+TGG | 0.737349 | 3.3:+64550037 | MS.gene35570:CDS |
TGGTTGTGAGAAAACCACCT+TGG | 0.782552 | 3.3:+64552841 | MS.gene35570:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAAAAATGTATT+TGG | + | chr3.3:64549535-64549554 | MS.gene35570:intron | 10.0% |
!! | ATAAATATAAACAAATAATG+AGG | + | chr3.3:64550919-64550938 | MS.gene35570:intron | 10.0% |
!! | ATGAAAATCAAATTATAAAT+AGG | - | chr3.3:64546803-64546822 | None:intergenic | 10.0% |
!! | ATTCCATTTAATATATTATT+TGG | + | chr3.3:64548416-64548435 | MS.gene35570:intron | 10.0% |
!! | TCATAAATATTTACTATTTA+TGG | - | chr3.3:64549812-64549831 | None:intergenic | 10.0% |
!! | TTTCCAAATAATATATTAAA+TGG | - | chr3.3:64548422-64548441 | None:intergenic | 10.0% |
!!! | ATTAGCATATTTTTATTTTT+AGG | + | chr3.3:64548618-64548637 | MS.gene35570:intron | 10.0% |
!!! | TATTTTCATTTTTTTTTTAG+AGG | + | chr3.3:64547000-64547019 | MS.gene35570:intron | 10.0% |
!!! | TATTTTTGCTTTTTTTTTTA+AGG | + | chr3.3:64548566-64548585 | MS.gene35570:intron | 10.0% |
!!! | TTATACATAGTATTTTTTTA+AGG | - | chr3.3:64549039-64549058 | None:intergenic | 10.0% |
!!! | TTTTTTTCTTTTTTCTTTTT+AGG | + | chr3.3:64547676-64547695 | MS.gene35570:intron | 10.0% |
!! | AATAAACTTTAACGATTTAA+TGG | + | chr3.3:64550845-64550864 | MS.gene35570:intron | 15.0% |
!! | ACTAAAATAATATTCCATAA+AGG | - | chr3.3:64549175-64549194 | None:intergenic | 15.0% |
!! | AGAAAATACCATTAATATTA+GGG | + | chr3.3:64549751-64549770 | MS.gene35570:intron | 15.0% |
!! | ATTAATGAACAATAAATAAG+AGG | + | chr3.3:64548275-64548294 | MS.gene35570:intron | 15.0% |
!! | ATTTCATATGCAATTTATAT+AGG | - | chr3.3:64550119-64550138 | None:intergenic | 15.0% |
!! | CTAAAATAATATTCCATAAA+GGG | - | chr3.3:64549174-64549193 | None:intergenic | 15.0% |
!! | CTAATATGAATTATGAATTA+TGG | + | chr3.3:64549631-64549650 | MS.gene35570:intron | 15.0% |
!! | TAAAAGTGAAAATTATGTAT+TGG | - | chr3.3:64548163-64548182 | None:intergenic | 15.0% |
!! | TCAAAAAAAAAATTGTTGAA+TGG | - | chr3.3:64547146-64547165 | None:intergenic | 15.0% |
!! | TTAACATAAAACATTATTGT+TGG | - | chr3.3:64550384-64550403 | None:intergenic | 15.0% |
!! | TTTCTAAATATAAAAGATCT+AGG | - | chr3.3:64551916-64551935 | None:intergenic | 15.0% |
!!! | AATAATATATTTTCCTCAAT+CGG | + | chr3.3:64547617-64547636 | MS.gene35570:intron | 15.0% |
!!! | AATATTTTGACAACTATTTT+GGG | + | chr3.3:64549132-64549151 | MS.gene35570:intron | 15.0% |
!!! | AATTTTCAAATATGTCATTT+CGG | - | chr3.3:64548395-64548414 | None:intergenic | 15.0% |
!!! | ACTAGTTAGATATATTTTAA+GGG | + | chr3.3:64548029-64548048 | MS.gene35570:intron | 15.0% |
!!! | AGATTACAATTTTAAATGAT+TGG | + | chr3.3:64546839-64546858 | MS.gene35570:intron | 15.0% |
!!! | ATTCAACAATTTTTTTTTTG+AGG | + | chr3.3:64547145-64547164 | MS.gene35570:intron | 15.0% |
!!! | CTTTTAAGTATTTTCATATT+TGG | + | chr3.3:64547059-64547078 | MS.gene35570:intron | 15.0% |
!!! | GGTTTGATTTATTAAAATAT+AGG | - | chr3.3:64548225-64548244 | None:intergenic | 15.0% |
!!! | TAATATTTTGACAACTATTT+TGG | + | chr3.3:64549131-64549150 | MS.gene35570:intron | 15.0% |
!!! | TACTAGTTAGATATATTTTA+AGG | + | chr3.3:64548028-64548047 | MS.gene35570:intron | 15.0% |
!!! | TTATTGATGATGATAATATA+TGG | + | chr3.3:64549723-64549742 | MS.gene35570:intron | 15.0% |
!!! | TTCAACAATTTTTTTTTTGA+GGG | + | chr3.3:64547146-64547165 | MS.gene35570:intron | 15.0% |
!!! | TTTTCGTTTTAATCTATTTA+GGG | - | chr3.3:64547734-64547753 | None:intergenic | 15.0% |
!!! | TTTTTCGTTTTAATCTATTT+AGG | - | chr3.3:64547735-64547754 | None:intergenic | 15.0% |
!! | AAACTCAATTCAAATGTATA+TGG | - | chr3.3:64551616-64551635 | None:intergenic | 20.0% |
!! | AATAAGAGGTAGATAAATAT+AGG | + | chr3.3:64548289-64548308 | MS.gene35570:intron | 20.0% |
!! | AATATTAAAATATCCGATTG+AGG | - | chr3.3:64547633-64547652 | None:intergenic | 20.0% |
!! | AATGTATACTATAACATGTT+TGG | + | chr3.3:64552049-64552068 | MS.gene35570:intron | 20.0% |
!! | ACATTTGTAAATGTATTTAC+GGG | + | chr3.3:64547175-64547194 | MS.gene35570:intron | 20.0% |
!! | AGTATTTATACCTGATAAAT+AGG | - | chr3.3:64552462-64552481 | None:intergenic | 20.0% |
!! | ATAAGCATGAATAGTATAAT+GGG | + | chr3.3:64551325-64551344 | MS.gene35570:intron | 20.0% |
!! | CAAATTGAGCTTATATTTAA+GGG | + | chr3.3:64549600-64549619 | MS.gene35570:intron | 20.0% |
!! | CAATTGAATTTATTATCAGT+TGG | + | chr3.3:64552105-64552124 | MS.gene35570:intron | 20.0% |
!! | CACATTTGTAAATGTATTTA+CGG | + | chr3.3:64547174-64547193 | MS.gene35570:intron | 20.0% |
!! | CAGAAAATACCATTAATATT+AGG | + | chr3.3:64549750-64549769 | MS.gene35570:intron | 20.0% |
!! | GTATTTATACCTGATAAATA+GGG | - | chr3.3:64552461-64552480 | None:intergenic | 20.0% |
!! | TAACATTTCCCTAATATTAA+TGG | - | chr3.3:64549762-64549781 | None:intergenic | 20.0% |
!! | TATAAGCATGAATAGTATAA+TGG | + | chr3.3:64551324-64551343 | MS.gene35570:intron | 20.0% |
!! | TCAAATTGAGCTTATATTTA+AGG | + | chr3.3:64549599-64549618 | MS.gene35570:intron | 20.0% |
!! | TGAAAATACTTAAACTCTTT+AGG | + | chr3.3:64546962-64546981 | MS.gene35570:intron | 20.0% |
!! | TTACAGATTAAATTCTATGA+TGG | - | chr3.3:64548721-64548740 | None:intergenic | 20.0% |
!! | TTTAAATAATACTTCAACCT+TGG | + | chr3.3:64546881-64546900 | MS.gene35570:intron | 20.0% |
!! | TTTGTTTATAACCATGTTAT+AGG | - | chr3.3:64552029-64552048 | None:intergenic | 20.0% |
!!! | ATTTTTTAACGTGATTAATC+TGG | - | chr3.3:64549371-64549390 | None:intergenic | 20.0% |
!!! | GTGGTTTAACTTTTTTTTTT+TGG | - | chr3.3:64547820-64547839 | None:intergenic | 20.0% |
!!! | TACAATTTTCATCATTCATT+TGG | - | chr3.3:64552132-64552151 | None:intergenic | 20.0% |
!!! | TCAACAACGTTAAAATTTTT+GGG | - | chr3.3:64548353-64548372 | None:intergenic | 20.0% |
!!! | TCTAATTTGTTAAATTGCAT+AGG | - | chr3.3:64549276-64549295 | None:intergenic | 20.0% |
!!! | TTAAATTTGCTAAAGAAGTA+TGG | + | chr3.3:64547212-64547231 | MS.gene35570:intron | 20.0% |
!!! | TTCAACAACGTTAAAATTTT+TGG | - | chr3.3:64548354-64548373 | None:intergenic | 20.0% |
!!! | TTTCAAGATAAACATGATTT+TGG | + | chr3.3:64546562-64546581 | MS.gene35570:CDS | 20.0% |
! | AAAACTATAATAGTGCAACT+TGG | - | chr3.3:64552505-64552524 | None:intergenic | 25.0% |
! | AACATTTCCTAATCATACAT+TGG | + | chr3.3:64550565-64550584 | MS.gene35570:intron | 25.0% |
! | AACGTGTTTAATTAATGCAT+TGG | + | chr3.3:64549833-64549852 | MS.gene35570:intron | 25.0% |
! | AATCCAAAGTATAAAAAGAC+AGG | + | chr3.3:64550210-64550229 | MS.gene35570:CDS | 25.0% |
! | AATGAAAAAACTCATTACTC+TGG | + | chr3.3:64552581-64552600 | MS.gene35570:CDS | 25.0% |
! | ACTAATGTAATTCATGAGTT+CGG | - | chr3.3:64548319-64548338 | None:intergenic | 25.0% |
! | AGAAATACAAAACATTTCAG+GGG | + | chr3.3:64547759-64547778 | MS.gene35570:intron | 25.0% |
! | AGAGAAATACAAAACATTTC+AGG | + | chr3.3:64547757-64547776 | MS.gene35570:intron | 25.0% |
! | ATAAAATAGATAGACGCAAA+TGG | - | chr3.3:64548257-64548276 | None:intergenic | 25.0% |
! | ATAGGTTAAATCAATCAAAC+TGG | - | chr3.3:64546785-64546804 | None:intergenic | 25.0% |
! | ATCTAATAGAAAACCCTTTA+TGG | + | chr3.3:64549158-64549177 | MS.gene35570:intron | 25.0% |
! | ATGAAAACCTGATATACTAA+AGG | - | chr3.3:64552081-64552100 | None:intergenic | 25.0% |
! | ATGCAAATGTATTTCACAAA+AGG | - | chr3.3:64548135-64548154 | None:intergenic | 25.0% |
! | ATGTATGATTAGGAAATGTT+AGG | - | chr3.3:64550565-64550584 | None:intergenic | 25.0% |
! | ATTTAGAAAATCTAGTTGTG+AGG | + | chr3.3:64551927-64551946 | MS.gene35570:intron | 25.0% |
! | CAGAAATATAAAGTAGACAT+TGG | + | chr3.3:64552399-64552418 | MS.gene35570:CDS | 25.0% |
! | CATATGCAATTTATATAGGA+TGG | - | chr3.3:64550115-64550134 | None:intergenic | 25.0% |
! | GAGAAATACAAAACATTTCA+GGG | + | chr3.3:64547758-64547777 | MS.gene35570:intron | 25.0% |
! | GATGAAAATTGTAAATATGC+AGG | + | chr3.3:64552139-64552158 | MS.gene35570:intron | 25.0% |
! | TAATATAACTCACCAGAATT+TGG | - | chr3.3:64551803-64551822 | None:intergenic | 25.0% |
! | TACTATTTATGGTCCTTAAA+AGG | - | chr3.3:64549801-64549820 | None:intergenic | 25.0% |
! | TCAATTCACACTTAAAATTG+TGG | + | chr3.3:64549421-64549440 | MS.gene35570:intron | 25.0% |
! | TCAGAATATATGACTTACAT+TGG | - | chr3.3:64550310-64550329 | None:intergenic | 25.0% |
! | TTATAACCATGTTATAGGTA+CGG | - | chr3.3:64552024-64552043 | None:intergenic | 25.0% |
! | TTTAGAAAATCTAGTTGTGA+GGG | + | chr3.3:64551928-64551947 | MS.gene35570:intron | 25.0% |
! | TTTGGTGAAATCTCTTTAAT+TGG | + | chr3.3:64548797-64548816 | MS.gene35570:intron | 25.0% |
!! | AAAGTAGACATTGGATTTTA+TGG | + | chr3.3:64552408-64552427 | MS.gene35570:CDS | 25.0% |
!! | AGTATTTTCATATTGTTTGC+AGG | + | chr3.3:64547024-64547043 | MS.gene35570:intron | 25.0% |
!! | ATCATGATTATGTCTTTTTC+AGG | - | chr3.3:64547299-64547318 | None:intergenic | 25.0% |
!! | CAACAACGTTAAAATTTTTG+GGG | - | chr3.3:64548352-64548371 | None:intergenic | 25.0% |
!! | CACTACACTTTGATTTAAAT+AGG | - | chr3.3:64549253-64549272 | None:intergenic | 25.0% |
!! | CATCATAATTTGTCTAATTG+TGG | - | chr3.3:64548835-64548854 | None:intergenic | 25.0% |
!! | TGTCTTTTTATACTTTGGAT+TGG | - | chr3.3:64550211-64550230 | None:intergenic | 25.0% |
!! | TTTCCTGTCTTTTTATACTT+TGG | - | chr3.3:64550216-64550235 | None:intergenic | 25.0% |
!!! | ACATATTGTTTTAGACTGAA+AGG | + | chr3.3:64551637-64551656 | MS.gene35570:intron | 25.0% |
!!! | ATATTATTTCTACACACGAT+TGG | + | chr3.3:64547648-64547667 | MS.gene35570:intron | 25.0% |
!!! | CTTTTTTCTTTTTAGGCAAT+CGG | + | chr3.3:64547683-64547702 | MS.gene35570:intron | 25.0% |
!!! | TTTTTTCATTGTTCACACAT+TGG | - | chr3.3:64552571-64552590 | None:intergenic | 25.0% |
AAACTTGTGTGTATAAAACC+AGG | - | chr3.3:64550996-64551015 | None:intergenic | 30.0% | |
AAATGCTAACATGTGCTTAA+GGG | - | chr3.3:64548202-64548221 | None:intergenic | 30.0% | |
AAGTTCCATATATGATAGCA+AGG | + | chr3.3:64551565-64551584 | MS.gene35570:CDS | 30.0% | |
ACTCAAATTCCTTAATCAAG+TGG | + | chr3.3:64551876-64551895 | MS.gene35570:intron | 30.0% | |
AGATGCATTTACCTTTATTG+GGG | - | chr3.3:64550092-64550111 | None:intergenic | 30.0% | |
AGTTAAACAATGACACTATG+AGG | + | chr3.3:64549483-64549502 | MS.gene35570:intron | 30.0% | |
ATACATAAGAACCATCAGAT+AGG | - | chr3.3:64551172-64551191 | None:intergenic | 30.0% | |
ATGAGAACCAATGTATGATT+AGG | - | chr3.3:64550575-64550594 | None:intergenic | 30.0% | |
ATTGATTAAGCTGATCTGTA+TGG | + | chr3.3:64547594-64547613 | MS.gene35570:intron | 30.0% | |
CAAGTTTCCTTAAAGAACTT+TGG | + | chr3.3:64551009-64551028 | MS.gene35570:CDS | 30.0% | |
CTAATGTAATTCATGAGTTC+GGG | - | chr3.3:64548318-64548337 | None:intergenic | 30.0% | |
GAGATGCATTTACCTTTATT+GGG | - | chr3.3:64550093-64550112 | None:intergenic | 30.0% | |
GCAATTCAGATTATACAATC+AGG | + | chr3.3:64547419-64547438 | MS.gene35570:intron | 30.0% | |
TAAAGAGATTTCACCAAAGA+GGG | - | chr3.3:64548795-64548814 | None:intergenic | 30.0% | |
TAATATGGAGAACGATTGAA+AGG | + | chr3.3:64547556-64547575 | MS.gene35570:intron | 30.0% | |
TAATCTGAATTGCATGATCT+CGG | - | chr3.3:64547412-64547431 | None:intergenic | 30.0% | |
TAATGGAACAATGCTTCATT+AGG | + | chr3.3:64550862-64550881 | MS.gene35570:intron | 30.0% | |
TAGATAGAAAACAACAACCA+TGG | + | chr3.3:64552268-64552287 | MS.gene35570:CDS | 30.0% | |
TATCTGATGGTTCTTATGTA+TGG | + | chr3.3:64551171-64551190 | MS.gene35570:CDS | 30.0% | |
TATTTGGCCAAAGTTCTTTA+AGG | - | chr3.3:64551019-64551038 | None:intergenic | 30.0% | |
TCGTAACTCATCATCTTTAT+TGG | - | chr3.3:64548002-64548021 | None:intergenic | 30.0% | |
TTAAAGAGATTTCACCAAAG+AGG | - | chr3.3:64548796-64548815 | None:intergenic | 30.0% | |
TTAGAAAATCTAGTTGTGAG+GGG | + | chr3.3:64551929-64551948 | MS.gene35570:intron | 30.0% | |
TTCCTGCAGTAAAAAATACA+TGG | + | chr3.3:64547353-64547372 | MS.gene35570:intron | 30.0% | |
TTGTTGAATGAGAAATTTCG+AGG | + | chr3.3:64548366-64548385 | MS.gene35570:intron | 30.0% | |
TTTCATGCTAGCTAGAATTA+CGG | - | chr3.3:64546947-64546966 | None:intergenic | 30.0% | |
! | AGGACATTTTGTTGATATGT+AGG | + | chr3.3:64550939-64550958 | MS.gene35570:intron | 30.0% |
! | ATATGTTACTTCAAGTTTGC+AGG | - | chr3.3:64548955-64548974 | None:intergenic | 30.0% |
! | GATTTAGCCTTTAGTATATC+AGG | + | chr3.3:64552071-64552090 | MS.gene35570:intron | 30.0% |
! | GTTATCATATTTGGTGACAT+GGG | + | chr3.3:64551251-64551270 | MS.gene35570:CDS | 30.0% |
! | TGAATAGTATAATGGGAAGA+AGG | + | chr3.3:64551332-64551351 | MS.gene35570:intron | 30.0% |
! | TGTTATCATATTTGGTGACA+TGG | + | chr3.3:64551250-64551269 | MS.gene35570:CDS | 30.0% |
! | TTTCAAATATGTCATTTCGG+TGG | - | chr3.3:64548392-64548411 | None:intergenic | 30.0% |
! | TTTGACATTGTTTTCCACAT+AGG | + | chr3.3:64551468-64551487 | MS.gene35570:CDS | 30.0% |
!! | TCCTATTTGGAGTATTTTCA+GGG | + | chr3.3:64552676-64552695 | MS.gene35570:CDS | 30.0% |
!! | TTGATTGCTACATTTTGATG+TGG | - | chr3.3:64547839-64547858 | None:intergenic | 30.0% |
!! | TTTTATACTTTGGATTGGAG+TGG | - | chr3.3:64550206-64550225 | None:intergenic | 30.0% |
!!! | AACGTTAAAATTTTTGGGGT+AGG | - | chr3.3:64548348-64548367 | None:intergenic | 30.0% |
!!! | CACATTTTTTCATAATGCAG+TGG | + | chr3.3:64551664-64551683 | MS.gene35570:intron | 30.0% |
!!! | TTTTTTTGGTAGTGTTGATG+TGG | - | chr3.3:64547806-64547825 | None:intergenic | 30.0% |
AAAGAGATTTCACCAAAGAG+GGG | - | chr3.3:64548794-64548813 | None:intergenic | 35.0% | |
AAATGGATACATCTCACAGT+GGG | + | chr3.3:64551506-64551525 | MS.gene35570:CDS | 35.0% | |
AAGAACTTTGGCCAAATATG+AGG | + | chr3.3:64551021-64551040 | MS.gene35570:CDS | 35.0% | |
AAGACTCCAAATATGAGAGA+TGG | + | chr3.3:64547518-64547537 | MS.gene35570:intron | 35.0% | |
AATGAGTGATAGTCTTTGAC+TGG | + | chr3.3:64549693-64549712 | MS.gene35570:intron | 35.0% | |
AATGCTTAAAGAATGCCCTA+GGG | + | chr3.3:64549902-64549921 | MS.gene35570:intron | 35.0% | |
AATGTAGCAATCAACCCAAA+CGG | + | chr3.3:64547845-64547864 | MS.gene35570:intron | 35.0% | |
AATTTGAGTACCTTAGCACT+CGG | - | chr3.3:64551865-64551884 | None:intergenic | 35.0% | |
ACCTTAATGCCAAGCAAAAA+GGG | - | chr3.3:64546722-64546741 | None:intergenic | 35.0% | |
AGAACCAACTAATGAAGACT+GGG | + | chr3.3:64548915-64548934 | MS.gene35570:CDS | 35.0% | |
AGACTAGCATTCTTAAACGA+TGG | + | chr3.3:64551990-64552009 | MS.gene35570:intron | 35.0% | |
AGCTCATGAGTGATGTAATA+TGG | + | chr3.3:64547541-64547560 | MS.gene35570:intron | 35.0% | |
ATGAGTGATAGTCTTTGACT+GGG | + | chr3.3:64549694-64549713 | MS.gene35570:intron | 35.0% | |
ATGTACTCCTATATTGTTGC+AGG | + | chr3.3:64548852-64548871 | MS.gene35570:intron | 35.0% | |
ATTGCATGATCTCGGATTAA+TGG | - | chr3.3:64547404-64547423 | None:intergenic | 35.0% | |
CTGAAAATACTCCAAATAGG+AGG | - | chr3.3:64552677-64552696 | None:intergenic | 35.0% | |
GAAATGCTAACATGTGCTTA+AGG | - | chr3.3:64548203-64548222 | None:intergenic | 35.0% | |
GAGATGTATCCATTTGCATA+TGG | - | chr3.3:64551501-64551520 | None:intergenic | 35.0% | |
GAGTACAAGAAAAGTAGTGA+TGG | + | chr3.3:64552755-64552774 | MS.gene35570:CDS | 35.0% | |
GGAGATGCATTTACCTTTAT+TGG | - | chr3.3:64550094-64550113 | None:intergenic | 35.0% | |
GGTTCTGCATTATACACATT+TGG | - | chr3.3:64552550-64552569 | None:intergenic | 35.0% | |
GTCGAGAAAAACTGAAACAA+AGG | + | chr3.3:64547900-64547919 | MS.gene35570:intron | 35.0% | |
GTTCTTATGTATGGAGTAAG+AGG | + | chr3.3:64551180-64551199 | MS.gene35570:CDS | 35.0% | |
TAATAGTACATGGTTTCTGC+AGG | - | chr3.3:64551763-64551782 | None:intergenic | 35.0% | |
TACCTTAATGCCAAGCAAAA+AGG | - | chr3.3:64546723-64546742 | None:intergenic | 35.0% | |
TAGAAAATCTAGTTGTGAGG+GGG | + | chr3.3:64551930-64551949 | MS.gene35570:intron | 35.0% | |
TCATGATATGCATGATCTCA+TGG | - | chr3.3:64549104-64549123 | None:intergenic | 35.0% | |
TCCCTGAAAATACTCCAAAT+AGG | - | chr3.3:64552680-64552699 | None:intergenic | 35.0% | |
TCTCTTGGAGTAAAATACCA+AGG | - | chr3.3:64546901-64546920 | None:intergenic | 35.0% | |
TGAATGGCAATCTTTGACAA+TGG | - | chr3.3:64546653-64546672 | None:intergenic | 35.0% | |
TGTACTCCTATATTGTTGCA+GGG | + | chr3.3:64548853-64548872 | MS.gene35570:intron | 35.0% | |
TGTGTTTCTTCACAAACTTG+AGG | + | chr3.3:64546591-64546610 | MS.gene35570:CDS | 35.0% | |
TTCTTCACAAACTTGAGGAT+GGG | + | chr3.3:64546596-64546615 | MS.gene35570:CDS | 35.0% | |
TTGCAGCGTGTTATCATATT+TGG | + | chr3.3:64551242-64551261 | MS.gene35570:CDS | 35.0% | |
TTGGGTGATATGAATGGAAT+TGG | + | chr3.3:64546620-64546639 | MS.gene35570:CDS | 35.0% | |
TTTCTTCACAAACTTGAGGA+TGG | + | chr3.3:64546595-64546614 | MS.gene35570:CDS | 35.0% | |
! | AGTCTTCATTAGTTGGTTCT+GGG | - | chr3.3:64548915-64548934 | None:intergenic | 35.0% |
! | CAAGAAAAGTAGTGATGGAA+AGG | + | chr3.3:64552760-64552779 | MS.gene35570:CDS | 35.0% |
! | GAGCTTATATTTAAGGGCAT+CGG | + | chr3.3:64549606-64549625 | MS.gene35570:intron | 35.0% |
! | GCGAAATCAAAAAGCACAAT+TGG | + | chr3.3:64547963-64547982 | MS.gene35570:intron | 35.0% |
! | GTGCGAAACAAATTTTACGA+CGG | + | chr3.3:64551967-64551986 | MS.gene35570:intron | 35.0% |
! | GTTTTCTATCTACTGTTGCA+AGG | - | chr3.3:64552260-64552279 | None:intergenic | 35.0% |
! | TTCTCCTTTGCACTATTTTC+AGG | + | chr3.3:64550276-64550295 | MS.gene35570:CDS | 35.0% |
! | TTTGTGAACTTTTGTCGAAC+TGG | - | chr3.3:64551095-64551114 | None:intergenic | 35.0% |
!! | AATGAGTTTTGTCCAGGATA+TGG | - | chr3.3:64551224-64551243 | None:intergenic | 35.0% |
!! | CTCCTATTTGGAGTATTTTC+AGG | + | chr3.3:64552675-64552694 | MS.gene35570:CDS | 35.0% |
!! | GAGTAAGAGGTATTCATTCA+AGG | + | chr3.3:64551193-64551212 | MS.gene35570:CDS | 35.0% |
!!! | AGTGTCATTTTTGAACTACG+TGG | - | chr3.3:64547250-64547269 | None:intergenic | 35.0% |
!!! | GTACTGGTATCTTTTTTCTC+TGG | - | chr3.3:64546925-64546944 | None:intergenic | 35.0% |
!!! | TCTTTTTTCTCTGGTTCTCT+TGG | - | chr3.3:64546916-64546935 | None:intergenic | 35.0% |
AATGACAGATGACAGTTACC+TGG | + | chr3.3:64550677-64550696 | MS.gene35570:intron | 40.0% | |
AATGATTGGTATGCCAAGGA+GGG | + | chr3.3:64552330-64552349 | MS.gene35570:CDS | 40.0% | |
ACCCAAACGGGTATTATAGA+CGG | + | chr3.3:64547858-64547877 | MS.gene35570:intron | 40.0% | |
ACCGTCTATAATACCCGTTT+GGG | - | chr3.3:64547862-64547881 | None:intergenic | 40.0% | |
AGATCTAGGAATTGAGCTAG+TGG | - | chr3.3:64551902-64551921 | None:intergenic | 40.0% | |
ATCTCTATAGTCCCTGGAAA+TGG | - | chr3.3:64552801-64552820 | None:intergenic | 40.0% | |
ATGGGTTTGGGTGATATGAA+TGG | + | chr3.3:64546614-64546633 | MS.gene35570:CDS | 40.0% | |
ATGTAGCAATCAACCCAAAC+GGG | + | chr3.3:64547846-64547865 | MS.gene35570:intron | 40.0% | |
CAAATGGATACATCTCACAG+TGG | + | chr3.3:64551505-64551524 | MS.gene35570:CDS | 40.0% | |
CAGAACCAACTAATGAAGAC+TGG | + | chr3.3:64548914-64548933 | MS.gene35570:CDS | 40.0% | |
CCTTAATGCCAAGCAAAAAG+GGG | - | chr3.3:64546721-64546740 | None:intergenic | 40.0% | |
CGGTACAACTACAAGAAAAG+TGG | + | chr3.3:64547878-64547897 | MS.gene35570:intron | 40.0% | |
CTAGCATTCTTAAACGATGG+TGG | + | chr3.3:64551993-64552012 | MS.gene35570:intron | 40.0% | |
CTCTAATGATTGGTATGCCA+AGG | + | chr3.3:64552326-64552345 | MS.gene35570:CDS | 40.0% | |
CTGAATGCGTACCTCATATT+TGG | - | chr3.3:64551035-64551054 | None:intergenic | 40.0% | |
CTGAGAACAAAGCCAAATTC+TGG | + | chr3.3:64551788-64551807 | MS.gene35570:CDS | 40.0% | |
CTTAATGCCAAGCAAAAAGG+GGG | - | chr3.3:64546720-64546739 | None:intergenic | 40.0% | |
CTTGGCATACCAATCATTAG+AGG | - | chr3.3:64552328-64552347 | None:intergenic | 40.0% | |
GAATGCTTAAAGAATGCCCT+AGG | + | chr3.3:64549901-64549920 | MS.gene35570:intron | 40.0% | |
GATACTCCGTACCTATAACA+TGG | + | chr3.3:64552015-64552034 | MS.gene35570:intron | 40.0% | |
GGAACAATTCACGTTGTTGT+CGG | + | chr3.3:64552614-64552633 | MS.gene35570:CDS | 40.0% | |
GGCACACTCTTTCATAGTTA+TGG | - | chr3.3:64552440-64552459 | None:intergenic | 40.0% | |
GTGGAAATCATGAACGTGAT+TGG | + | chr3.3:64551683-64551702 | MS.gene35570:intron | 40.0% | |
TAATGATTGGTATGCCAAGG+AGG | + | chr3.3:64552329-64552348 | MS.gene35570:CDS | 40.0% | |
TACCGTCTATAATACCCGTT+TGG | - | chr3.3:64547863-64547882 | None:intergenic | 40.0% | |
TATGGTCCTTAAAAGGACAC+TGG | - | chr3.3:64549794-64549813 | None:intergenic | 40.0% | |
TATGTCATATCCACTTGTCC+AGG | - | chr3.3:64550698-64550717 | None:intergenic | 40.0% | |
TCATAGAAGGATCCTGAGTT+TGG | - | chr3.3:64551709-64551728 | None:intergenic | 40.0% | |
TCATATTGTTTGCAGGTAGC+AGG | + | chr3.3:64547031-64547050 | MS.gene35570:intron | 40.0% | |
TCCACCTGAAAATAGTGCAA+AGG | - | chr3.3:64550283-64550302 | None:intergenic | 40.0% | |
TCGGTTACTCCTCTAATGAT+TGG | + | chr3.3:64552316-64552335 | MS.gene35570:CDS | 40.0% | |
TGAGCTCCATCTCTCATATT+TGG | - | chr3.3:64547527-64547546 | None:intergenic | 40.0% | |
TGCAGGTATGCAACAGATTA+TGG | + | chr3.3:64552156-64552175 | MS.gene35570:intron | 40.0% | |
TGTCTAGATCATTGATGAGC+TGG | - | chr3.3:64551446-64551465 | None:intergenic | 40.0% | |
TGTGCTGCAAAGATTAACCA+TGG | - | chr3.3:64552288-64552307 | None:intergenic | 40.0% | |
TGTTCGTTGGATAGTGTTTG+CGG | - | chr3.3:64547932-64547951 | None:intergenic | 40.0% | |
TTCAATCGTAACAGCTTGTG+TGG | + | chr3.3:64550793-64550812 | MS.gene35570:CDS | 40.0% | |
TTCGAAATTGCCACAAGTCT+AGG | - | chr3.3:64550435-64550454 | None:intergenic | 40.0% | |
TTCTATGACACTCCAGATTC+AGG | + | chr3.3:64551721-64551740 | MS.gene35570:CDS | 40.0% | |
! | AAGAGTGTGCCCTATTTATC+AGG | + | chr3.3:64552449-64552468 | MS.gene35570:CDS | 40.0% |
! | ACAAACTTGAGGATGGGTTT+GGG | + | chr3.3:64546602-64546621 | MS.gene35570:CDS | 40.0% |
! | ACGACTCTTTTACCATTTCC+AGG | + | chr3.3:64552786-64552805 | MS.gene35570:CDS | 40.0% |
! | AGACGCAAATGGAGTATTAG+TGG | - | chr3.3:64548246-64548265 | None:intergenic | 40.0% |
! | AGTACTCCAGTGTCCTTTTA+AGG | + | chr3.3:64549785-64549804 | MS.gene35570:intron | 40.0% |
! | ATACTTTGGATTGGAGTGGT+TGG | - | chr3.3:64550202-64550221 | None:intergenic | 40.0% |
! | CAGTCTTCATTAGTTGGTTC+TGG | - | chr3.3:64548916-64548935 | None:intergenic | 40.0% |
! | CATATTTGGTGACATGGGAA+AGG | + | chr3.3:64551256-64551275 | MS.gene35570:CDS | 40.0% |
! | CGACTCTTTTACCATTTCCA+GGG | + | chr3.3:64552787-64552806 | MS.gene35570:CDS | 40.0% |
! | GCGAACCTTGCTATCATATA+TGG | - | chr3.3:64551573-64551592 | None:intergenic | 40.0% |
! | TCCAAGATTTTCCATGAGCA+AGG | - | chr3.3:64550500-64550519 | None:intergenic | 40.0% |
! | TGAATCTGGAGTGTCATAGA+AGG | - | chr3.3:64551722-64551741 | None:intergenic | 40.0% |
! | TTAGGGCATTTCCTATCTGA+TGG | + | chr3.3:64551158-64551177 | MS.gene35570:CDS | 40.0% |
!! | AAGTGAACCAGGTTGGTAAT+CGG | - | chr3.3:64551412-64551431 | None:intergenic | 40.0% |
!! | AATTTGGCTTTGTTCTCAGC+AGG | - | chr3.3:64551787-64551806 | None:intergenic | 40.0% |
!! | AGACAACGTGAGTATTGACA+TGG | - | chr3.3:64549227-64549246 | None:intergenic | 40.0% |
!! | AGCAAGAATGGTCTTGTGAA+TGG | - | chr3.3:64546669-64546688 | None:intergenic | 40.0% |
!! | ATCTATTTAGGGTGTCGCAA+AGG | - | chr3.3:64547723-64547742 | None:intergenic | 40.0% |
!! | ATTTGGCTTTGTTCTCAGCA+GGG | - | chr3.3:64551786-64551805 | None:intergenic | 40.0% |
!! | ATTTTCAGGGACAGAGACTA+CGG | + | chr3.3:64552689-64552708 | MS.gene35570:CDS | 40.0% |
!! | GTCTTCATTAGTTGGTTCTG+GGG | - | chr3.3:64548914-64548933 | None:intergenic | 40.0% |
!! | TCCTTTGCACTATTTTCAGG+TGG | + | chr3.3:64550279-64550298 | MS.gene35570:CDS | 40.0% |
!!! | CGCCATGTATTTTTTACTGC+AGG | - | chr3.3:64547358-64547377 | None:intergenic | 40.0% |
AAAATCTAGTTGTGAGGGGG+AGG | + | chr3.3:64551933-64551952 | MS.gene35570:intron | 45.0% | |
AACCATGAACCACCAACAGA+TGG | + | chr3.3:64551834-64551853 | MS.gene35570:intron | 45.0% | |
AAGCAGATACAATCTGCTGC+TGG | + | chr3.3:64550760-64550779 | MS.gene35570:CDS | 45.0% | |
AAGCTGTACCATTCGTGGAA+TGG | + | chr3.3:64550722-64550741 | MS.gene35570:CDS | 45.0% | |
AAGTGAAGCTGTACCATTCG+TGG | + | chr3.3:64550717-64550736 | MS.gene35570:CDS | 45.0% | |
ACAATTCACGTTGTTGTCGG+CGG | + | chr3.3:64552617-64552636 | MS.gene35570:CDS | 45.0% | |
ACATGACTGGAGAGAAGGAT+CGG | + | chr3.3:64552209-64552228 | MS.gene35570:CDS | 45.0% | |
AGAACTGTGGAGAGCAAGAA+TGG | - | chr3.3:64546681-64546700 | None:intergenic | 45.0% | |
AGAATGGGTGACAGTAGAAG+TGG | + | chr3.3:64548885-64548904 | MS.gene35570:CDS | 45.0% | |
AGCTAGTGGCCACTTGATTA+AGG | - | chr3.3:64551888-64551907 | None:intergenic | 45.0% | |
AGCTGTACCATTCGTGGAAT+GGG | + | chr3.3:64550723-64550742 | MS.gene35570:CDS | 45.0% | |
AGGCAATCGGAGTGTAGATA+GGG | + | chr3.3:64547696-64547715 | MS.gene35570:intron | 45.0% | |
AGTATTGCAGCCTAGACTTG+TGG | + | chr3.3:64550422-64550441 | MS.gene35570:intron | 45.0% | |
AGTGAACATGACTGGAGAGA+AGG | + | chr3.3:64552204-64552223 | MS.gene35570:CDS | 45.0% | |
ATCATTGATGAGCTGGTCAG+TGG | - | chr3.3:64551439-64551458 | None:intergenic | 45.0% | |
ATGAACCACCAACAGATGGT+TGG | + | chr3.3:64551838-64551857 | MS.gene35570:intron | 45.0% | |
ATGACAGTTACCTGGACAAG+TGG | + | chr3.3:64550685-64550704 | MS.gene35570:CDS | 45.0% | |
ATGGGAAGGGAAAGTTTGCA+GGG | + | chr3.3:64552369-64552388 | MS.gene35570:CDS | 45.0% | |
ATTGGGGCTGAGCATGTATA+TGG | - | chr3.3:64550076-64550095 | None:intergenic | 45.0% | |
ATTTCAAGAGCCCATGGGAA+GGG | + | chr3.3:64552356-64552375 | MS.gene35570:CDS | 45.0% | |
CAAAAAGGGGGAAGCAGTAA+TGG | - | chr3.3:64546708-64546727 | None:intergenic | 45.0% | |
CAAGACATCTCTATAGTCCC+TGG | - | chr3.3:64552807-64552826 | None:intergenic | 45.0% | |
CAGGGACTATAGAGATGTCT+TGG | + | chr3.3:64552805-64552824 | MS.gene35570:CDS | 45.0% | |
CATATGGCAGATCTCCTATG+TGG | - | chr3.3:64551485-64551504 | None:intergenic | 45.0% | |
CATTACTCTGGCACTGTGAA+TGG | + | chr3.3:64552593-64552612 | MS.gene35570:CDS | 45.0% | |
CATTAGAGGAGTAACCGAGT+GGG | - | chr3.3:64552314-64552333 | None:intergenic | 45.0% | |
CATTCATAGAGACCCCTCTT+TGG | + | chr3.3:64548779-64548798 | MS.gene35570:intron | 45.0% | |
CCAACCCAGTCTTCATTAGT+TGG | - | chr3.3:64548922-64548941 | None:intergenic | 45.0% | |
CCAACTAATGAAGACTGGGT+TGG | + | chr3.3:64548919-64548938 | MS.gene35570:CDS | 45.0% | |
CTCAGCAGGGTAATAGTACA+TGG | - | chr3.3:64551773-64551792 | None:intergenic | 45.0% | |
CTCTTGAAATGAACCCTCCT+TGG | - | chr3.3:64552346-64552365 | None:intergenic | 45.0% | |
CTTGTTAACGAGTGTCCCTA+GGG | - | chr3.3:64549920-64549939 | None:intergenic | 45.0% | |
CTTTGCTTCGTGTGTTCTTC+AGG | + | chr3.3:64551359-64551378 | MS.gene35570:intron | 45.0% | |
GCAAGTGTACACATGTTCGT+TGG | - | chr3.3:64547945-64547964 | None:intergenic | 45.0% | |
GCCTTGCTCATGGAAAATCT+TGG | + | chr3.3:64550496-64550515 | MS.gene35570:CDS | 45.0% | |
GCTAGCTAGAATTACGGTAC+TGG | - | chr3.3:64546941-64546960 | None:intergenic | 45.0% | |
GGAGATCTGCCATATGCAAA+TGG | + | chr3.3:64551489-64551508 | MS.gene35570:CDS | 45.0% | |
GGTTCATTTCAAGAGCCCAT+GGG | + | chr3.3:64552351-64552370 | MS.gene35570:CDS | 45.0% | |
GTATCTGCTTTCCACCCTTT+GGG | - | chr3.3:64550750-64550769 | None:intergenic | 45.0% | |
TACATGCTCAGCCCCAATAA+AGG | + | chr3.3:64550078-64550097 | MS.gene35570:CDS | 45.0% | |
TAGCAGACAGTGAACATGAC+TGG | + | chr3.3:64552196-64552215 | MS.gene35570:CDS | 45.0% | |
TAGGAAATGCCCTAACCTGT+AGG | - | chr3.3:64551153-64551172 | None:intergenic | 45.0% | |
TAGGCAATCGGAGTGTAGAT+AGG | + | chr3.3:64547695-64547714 | MS.gene35570:intron | 45.0% | |
TATGACACTCCAGATTCAGG+TGG | + | chr3.3:64551724-64551743 | MS.gene35570:CDS | 45.0% | |
TCAATATGTACACCCAACCC+CGG | + | chr3.3:64550034-64550053 | MS.gene35570:CDS | 45.0% | |
TCACAACAGCACCTCCTATT+TGG | + | chr3.3:64552663-64552682 | MS.gene35570:CDS | 45.0% | |
TCATTAGAGGAGTAACCGAG+TGG | - | chr3.3:64552315-64552334 | None:intergenic | 45.0% | |
TCCTATATTGTTGCAGGGTG+AGG | + | chr3.3:64548858-64548877 | MS.gene35570:intron | 45.0% | |
TCCTCACCCTGCAACAATAT+AGG | - | chr3.3:64548862-64548881 | None:intergenic | 45.0% | |
TCGTAACAGCTTGTGTGGTA+TGG | + | chr3.3:64550798-64550817 | MS.gene35570:intron | 45.0% | |
TCTTGTTAACGAGTGTCCCT+AGG | - | chr3.3:64549921-64549940 | None:intergenic | 45.0% | |
TGCAAACTTTCCCTTCCCAT+GGG | - | chr3.3:64552369-64552388 | None:intergenic | 45.0% | |
TGGTTGTGAGAAAACCACCT+TGG | + | chr3.3:64552841-64552860 | MS.gene35570:CDS | 45.0% | |
TGTATCTGCTTTCCACCCTT+TGG | - | chr3.3:64550751-64550770 | None:intergenic | 45.0% | |
! | ATTTTCCTTGTTCTTCCCCC+AGG | + | chr3.3:64551123-64551142 | MS.gene35570:intron | 45.0% |
! | CACAAACTTGAGGATGGGTT+TGG | + | chr3.3:64546601-64546620 | MS.gene35570:CDS | 45.0% |
! | CCCCTTTTTGCTTGGCATTA+AGG | + | chr3.3:64546718-64546737 | MS.gene35570:CDS | 45.0% |
! | CTGCACGCTGATTGATCAAT+TGG | - | chr3.3:64550254-64550273 | None:intergenic | 45.0% |
! | GAATATGCCGATTACCAACC+TGG | + | chr3.3:64551402-64551421 | MS.gene35570:CDS | 45.0% |
! | TCAGTGGTGTTAAGTGAACC+AGG | - | chr3.3:64551423-64551442 | None:intergenic | 45.0% |
! | TGGTGTTAAGTGAACCAGGT+TGG | - | chr3.3:64551419-64551438 | None:intergenic | 45.0% |
! | TTCAAGGCATCTCCATATCC+TGG | + | chr3.3:64551209-64551228 | MS.gene35570:CDS | 45.0% |
!! | AACCATCTGTTGGTGGTTCA+TGG | - | chr3.3:64551839-64551858 | None:intergenic | 45.0% |
!! | CAGTAATGGATGCAGAACTG+TGG | - | chr3.3:64546694-64546713 | None:intergenic | 45.0% |
!! | CAAAAAAAAATTAATATTAA+GGG | - | chr3.3:64549944-64549963 | None:intergenic | 5.0% |
!! | TCAAAAAAAAATTAATATTA+AGG | - | chr3.3:64549945-64549964 | None:intergenic | 5.0% |
!!! | AAATAAAAGTAATTTTAATA+AGG | + | chr3.3:64548447-64548466 | MS.gene35570:intron | 5.0% |
!!! | AATAAAAGTAATTTTAATAA+GGG | + | chr3.3:64548448-64548467 | MS.gene35570:intron | 5.0% |
!!! | ATTAAAATTACTTTTATTTT+TGG | - | chr3.3:64548446-64548465 | None:intergenic | 5.0% |
!!! | ATTAACTAAATTATTATTTT+TGG | - | chr3.3:64548692-64548711 | None:intergenic | 5.0% |
!!! | TTAAAATTGATTTATATTTA+GGG | + | chr3.3:64549562-64549581 | MS.gene35570:intron | 5.0% |
!!! | TTTAAAATTGATTTATATTT+AGG | + | chr3.3:64549561-64549580 | MS.gene35570:intron | 5.0% |
CATGGGAAGGGAAAGTTTGC+AGG | + | chr3.3:64552368-64552387 | MS.gene35570:CDS | 50.0% | |
CATTTCAAGAGCCCATGGGA+AGG | + | chr3.3:64552355-64552374 | MS.gene35570:CDS | 50.0% | |
CCACATTCTCCACCTGAATC+TGG | - | chr3.3:64551736-64551755 | None:intergenic | 50.0% | |
CCAGATTCAGGTGGAGAATG+TGG | + | chr3.3:64551733-64551752 | MS.gene35570:CDS | 50.0% | |
CCAGGTACACCTACAGGTTA+GGG | + | chr3.3:64551141-64551160 | MS.gene35570:intron | 50.0% | |
CCTAACCTGTAGGTGTACCT+GGG | - | chr3.3:64551143-64551162 | None:intergenic | 50.0% | |
CGCGGATATACAGGTGCTTT+AGG | - | chr3.3:64550477-64550496 | None:intergenic | 50.0% | |
CTAACCTGTAGGTGTACCTG+GGG | - | chr3.3:64551142-64551161 | None:intergenic | 50.0% | |
CTCACAACCATCATGCACAC+AGG | - | chr3.3:64552831-64552850 | None:intergenic | 50.0% | |
CTGCAAACTTTCCCTTCCCA+TGG | - | chr3.3:64552370-64552389 | None:intergenic | 50.0% | |
GCAGGGTGAGGATACAGAAT+GGG | + | chr3.3:64548870-64548889 | MS.gene35570:intron | 50.0% | |
GCTGTACCATTCGTGGAATG+GGG | + | chr3.3:64550724-64550743 | MS.gene35570:CDS | 50.0% | |
GGGAAAGTTTGCAGGGACTT+TGG | + | chr3.3:64552376-64552395 | MS.gene35570:CDS | 50.0% | |
GGGTTCATTTCAAGAGCCCA+TGG | + | chr3.3:64552350-64552369 | MS.gene35570:CDS | 50.0% | |
TAACCTGTAGGTGTACCTGG+GGG | - | chr3.3:64551141-64551160 | None:intergenic | 50.0% | |
TGCAGGGTGAGGATACAGAA+TGG | + | chr3.3:64548869-64548888 | MS.gene35570:intron | 50.0% | |
TGCTTCGTGTGTTCTTCAGG+CGG | + | chr3.3:64551362-64551381 | MS.gene35570:intron | 50.0% | |
! | ACTGCTTCCCCCTTTTTGCT+TGG | + | chr3.3:64546710-64546729 | MS.gene35570:CDS | 50.0% |
! | GAACGTGATTGGCCAAACTC+AGG | + | chr3.3:64551694-64551713 | MS.gene35570:CDS | 50.0% |
! | GATTTTCCATGAGCAAGGCG+CGG | - | chr3.3:64550495-64550514 | None:intergenic | 50.0% |
!! | CGCTGCAATGAGTTTTGTCC+AGG | - | chr3.3:64551230-64551249 | None:intergenic | 50.0% |
AAGGGTCCTGCTAACACGTG+CGG | + | chr3.3:64548047-64548066 | MS.gene35570:intron | 55.0% | |
ACCAGGATCACGCCAACCAA+CGG | - | chr3.3:64550979-64550998 | None:intergenic | 55.0% | |
ATATGTACACCCAACCCCGG+TGG | + | chr3.3:64550037-64550056 | MS.gene35570:CDS | 55.0% | |
ATTCACGTTGTTGTCGGCGG+AGG | + | chr3.3:64552620-64552639 | MS.gene35570:CDS | 55.0% | |
ATTCGTGGAATGGGGCCCAA+AGG | + | chr3.3:64550732-64550751 | MS.gene35570:CDS | 55.0% | |
CACTCGGACCAACCATCTGT+TGG | - | chr3.3:64551849-64551868 | None:intergenic | 55.0% | |
CCCAGGTACACCTACAGGTT+AGG | + | chr3.3:64551140-64551159 | MS.gene35570:intron | 55.0% | |
CCCTAACCTGTAGGTGTACC+TGG | - | chr3.3:64551144-64551163 | None:intergenic | 55.0% | |
GTATATCCGCGCCTTGCTCA+TGG | + | chr3.3:64550486-64550505 | MS.gene35570:CDS | 55.0% | |
GTCTTGGCCTGTGTGCATGA+TGG | + | chr3.3:64552821-64552840 | MS.gene35570:CDS | 55.0% | |
GTGTACCTGGGGGAAGAACA+AGG | - | chr3.3:64551131-64551150 | None:intergenic | 55.0% | |
TCCTGCTAACACGTGCGGTA+AGG | + | chr3.3:64548052-64548071 | MS.gene35570:intron | 55.0% | |
TCCTTACCGCACGTGTTAGC+AGG | - | chr3.3:64548056-64548075 | None:intergenic | 55.0% | |
TCGGACCAACCATCTGTTGG+TGG | - | chr3.3:64551846-64551865 | None:intergenic | 55.0% | |
TGAGCAAGGCGCGGATATAC+AGG | - | chr3.3:64550486-64550505 | None:intergenic | 55.0% | |
TGGTATCTCTCCCTTGCCAC+CGG | - | chr3.3:64550056-64550075 | None:intergenic | 55.0% | |
TTCACGTTGTTGTCGGCGGA+GGG | + | chr3.3:64552621-64552640 | MS.gene35570:CDS | 55.0% | |
TTCGTGGAATGGGGCCCAAA+GGG | + | chr3.3:64550733-64550752 | MS.gene35570:CDS | 55.0% | |
TTTGCAGCACATCGCCCACT+CGG | + | chr3.3:64552297-64552316 | MS.gene35570:CDS | 55.0% | |
TTTGGGCCCCATTCCACGAA+TGG | - | chr3.3:64550733-64550752 | None:intergenic | 55.0% | |
! | GATGGTTGGTCCGAGTGCTA+AGG | + | chr3.3:64551852-64551871 | MS.gene35570:intron | 55.0% |
AACCTGCGCGAACCGTTGGT+TGG | + | chr3.3:64550964-64550983 | MS.gene35570:CDS | 60.0% | |
CTTCCCCCAGGTACACCTAC+AGG | + | chr3.3:64551135-64551154 | MS.gene35570:intron | 60.0% | |
GGTATCTCTCCCTTGCCACC+GGG | - | chr3.3:64550055-64550074 | None:intergenic | 60.0% | |
GTATCTCTCCCTTGCCACCG+GGG | - | chr3.3:64550054-64550073 | None:intergenic | 60.0% | |
GTTCTTCAGGCGGAGCGTGA+TGG | + | chr3.3:64551372-64551391 | MS.gene35570:intron | 60.0% | |
TCACGTTGTTGTCGGCGGAG+GGG | + | chr3.3:64552622-64552641 | MS.gene35570:CDS | 60.0% | |
! | ACCGTTGGTTGGCGTGATCC+TGG | + | chr3.3:64550975-64550994 | MS.gene35570:CDS | 60.0% |
ACACCCAACCCCGGTGGCAA+GGG | + | chr3.3:64550043-64550062 | MS.gene35570:CDS | 65.0% | |
CACGTTGTTGTCGGCGGAGG+GGG | + | chr3.3:64552623-64552642 | MS.gene35570:CDS | 65.0% | |
GGTGAACCTGCGCGAACCGT+TGG | + | chr3.3:64550960-64550979 | MS.gene35570:intron | 65.0% | |
GTGGAATGGGGCCCAAAGGG+TGG | + | chr3.3:64550736-64550755 | MS.gene35570:CDS | 65.0% | |
TACACCCAACCCCGGTGGCA+AGG | + | chr3.3:64550042-64550061 | MS.gene35570:CDS | 65.0% | |
TCTCCCTTGCCACCGGGGTT+GGG | - | chr3.3:64550049-64550068 | None:intergenic | 65.0% | |
CGCCAACCAACGGTTCGCGC+AGG | - | chr3.3:64550969-64550988 | None:intergenic | 70.0% | |
CTCTCCCTTGCCACCGGGGT+TGG | - | chr3.3:64550050-64550069 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 64546545 | 64552871 | 64546545 | ID=MS.gene35570 |
chr3.3 | mRNA | 64546545 | 64552871 | 64546545 | ID=MS.gene35570.t1;Parent=MS.gene35570 |
chr3.3 | exon | 64546545 | 64546739 | 64546545 | ID=MS.gene35570.t1.exon1;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64546545 | 64546739 | 64546545 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64548874 | 64548965 | 64548874 | ID=MS.gene35570.t1.exon2;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64548874 | 64548965 | 64548874 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64550030 | 64550099 | 64550030 | ID=MS.gene35570.t1.exon3;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64550030 | 64550099 | 64550030 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64550189 | 64550311 | 64550189 | ID=MS.gene35570.t1.exon4;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64550189 | 64550311 | 64550189 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64550432 | 64550524 | 64550432 | ID=MS.gene35570.t1.exon5;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64550432 | 64550524 | 64550432 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64550685 | 64550814 | 64550685 | ID=MS.gene35570.t1.exon6;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64550685 | 64550814 | 64550685 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64550961 | 64551042 | 64550961 | ID=MS.gene35570.t1.exon7;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64550961 | 64551042 | 64550961 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64551145 | 64551277 | 64551145 | ID=MS.gene35570.t1.exon8;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64551145 | 64551277 | 64551145 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64551381 | 64551586 | 64551381 | ID=MS.gene35570.t1.exon9;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64551381 | 64551586 | 64551381 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64551684 | 64551809 | 64551684 | ID=MS.gene35570.t1.exon10;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64551684 | 64551809 | 64551684 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64552161 | 64552470 | 64552161 | ID=MS.gene35570.t1.exon11;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64552161 | 64552470 | 64552161 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
chr3.3 | exon | 64552566 | 64552871 | 64552566 | ID=MS.gene35570.t1.exon12;Parent=MS.gene35570.t1 |
chr3.3 | CDS | 64552566 | 64552871 | 64552566 | ID=cds.MS.gene35570.t1;Parent=MS.gene35570.t1 |
Gene Sequence |
Protein sequence |