Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35642.t1 | XP_003601133.1 | 94.2 | 395 | 23 | 0 | 1 | 395 | 1 | 395 | 7.20E-208 | 733 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35642.t1 | Q6NQB7 | 69.9 | 405 | 98 | 9 | 1 | 394 | 1 | 392 | 7.7e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35642.t1 | G7J458 | 94.2 | 395 | 23 | 0 | 1 | 395 | 1 | 395 | 5.2e-208 | 733.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35642 | MS.gene29096 | PPI |
| MS.gene30750 | MS.gene35642 | PPI |
| MS.gene35642 | MS.gene29036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35642.t1 | MTR_3g073370 | 99.241 | 395 | 3 | 0 | 1 | 395 | 1 | 395 | 0.0 | 820 |
| MS.gene35642.t1 | MTR_3g073370 | 98.990 | 396 | 3 | 1 | 1 | 395 | 1 | 396 | 0.0 | 816 |
| MS.gene35642.t1 | MTR_4g048320 | 63.452 | 394 | 136 | 3 | 9 | 395 | 15 | 407 | 0.0 | 528 |
| MS.gene35642.t1 | MTR_4g035490 | 62.176 | 386 | 131 | 4 | 10 | 392 | 7 | 380 | 0.0 | 518 |
| MS.gene35642.t1 | MTR_2g088270 | 62.308 | 390 | 142 | 3 | 9 | 395 | 15 | 402 | 0.0 | 513 |
| MS.gene35642.t1 | MTR_4g048320 | 66.667 | 348 | 109 | 2 | 51 | 395 | 6 | 349 | 1.76e-178 | 500 |
| MS.gene35642.t1 | MTR_4g013305 | 56.858 | 401 | 135 | 3 | 1 | 395 | 10 | 378 | 9.63e-167 | 472 |
| MS.gene35642.t1 | MTR_5g009700 | 41.389 | 360 | 169 | 7 | 16 | 373 | 23 | 342 | 1.49e-85 | 264 |
| MS.gene35642.t1 | MTR_3g090600 | 39.024 | 369 | 180 | 8 | 7 | 373 | 17 | 342 | 2.92e-82 | 255 |
| MS.gene35642.t1 | MTR_5g009700 | 46.953 | 279 | 124 | 4 | 96 | 373 | 1 | 256 | 1.72e-81 | 250 |
| MS.gene35642.t1 | MTR_3g090600 | 39.024 | 369 | 178 | 9 | 7 | 373 | 17 | 340 | 1.25e-80 | 251 |
| MS.gene35642.t1 | MTR_1g012800 | 38.788 | 330 | 178 | 5 | 16 | 344 | 30 | 336 | 7.21e-73 | 231 |
| MS.gene35642.t1 | MTR_3g090600 | 39.365 | 315 | 162 | 8 | 7 | 316 | 17 | 307 | 1.86e-66 | 213 |
| MS.gene35642.t1 | MTR_3g090600 | 39.365 | 315 | 160 | 9 | 7 | 316 | 17 | 305 | 9.29e-65 | 209 |
| MS.gene35642.t1 | MTR_8g463930 | 36.071 | 280 | 163 | 8 | 106 | 382 | 62 | 328 | 1.77e-50 | 173 |
| MS.gene35642.t1 | MTR_2g078030 | 34.752 | 282 | 167 | 7 | 102 | 380 | 53 | 320 | 2.49e-49 | 170 |
| MS.gene35642.t1 | MTR_2g078030 | 36.546 | 249 | 148 | 5 | 102 | 348 | 53 | 293 | 2.13e-47 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35642.t1 | AT1G77810 | 71.537 | 397 | 98 | 7 | 1 | 395 | 1 | 384 | 0.0 | 584 |
| MS.gene35642.t1 | AT1G77810 | 71.000 | 400 | 98 | 8 | 1 | 395 | 1 | 387 | 0.0 | 578 |
| MS.gene35642.t1 | AT1G05170 | 63.198 | 394 | 137 | 3 | 9 | 395 | 15 | 407 | 0.0 | 535 |
| MS.gene35642.t1 | AT1G22015 | 64.541 | 392 | 135 | 4 | 3 | 393 | 5 | 393 | 0.0 | 528 |
| MS.gene35642.t1 | AT1G32930 | 61.111 | 396 | 143 | 3 | 5 | 395 | 10 | 399 | 0.0 | 518 |
| MS.gene35642.t1 | AT1G33430 | 63.185 | 383 | 132 | 4 | 10 | 387 | 7 | 385 | 1.26e-180 | 508 |
| MS.gene35642.t1 | AT2G32430 | 61.929 | 394 | 143 | 2 | 9 | 395 | 16 | 409 | 1.28e-180 | 508 |
| MS.gene35642.t1 | AT4G26940 | 62.404 | 391 | 141 | 4 | 9 | 395 | 19 | 407 | 6.57e-178 | 501 |
| MS.gene35642.t1 | AT1G33430 | 61.893 | 391 | 132 | 5 | 10 | 387 | 7 | 393 | 1.46e-177 | 500 |
| MS.gene35642.t1 | AT1G11730 | 60.104 | 386 | 133 | 6 | 9 | 393 | 17 | 382 | 9.55e-165 | 467 |
| MS.gene35642.t1 | AT1G05170 | 61.159 | 345 | 126 | 3 | 9 | 346 | 15 | 358 | 3.54e-157 | 447 |
| MS.gene35642.t1 | AT1G33430 | 59.804 | 306 | 114 | 4 | 10 | 310 | 7 | 308 | 3.19e-126 | 366 |
| MS.gene35642.t1 | AT4G26940 | 56.061 | 264 | 111 | 3 | 9 | 268 | 19 | 281 | 3.38e-93 | 282 |
| MS.gene35642.t1 | AT5G53340 | 39.818 | 329 | 175 | 6 | 16 | 342 | 19 | 326 | 1.24e-80 | 251 |
| MS.gene35642.t1 | AT5G53340 | 38.905 | 347 | 182 | 8 | 16 | 360 | 19 | 337 | 1.28e-80 | 251 |
| MS.gene35642.t1 | AT2G25300 | 40.060 | 332 | 170 | 8 | 16 | 344 | 31 | 336 | 3.23e-73 | 232 |
| MS.gene35642.t1 | AT2G25300 | 45.560 | 259 | 132 | 4 | 87 | 344 | 8 | 258 | 5.52e-73 | 229 |
| MS.gene35642.t1 | AT4G32120 | 38.554 | 332 | 175 | 6 | 16 | 344 | 30 | 335 | 4.46e-72 | 229 |
| MS.gene35642.t1 | AT1G53290 | 35.273 | 275 | 161 | 7 | 111 | 382 | 71 | 331 | 4.71e-50 | 172 |
| MS.gene35642.t1 | AT3G14960 | 35.472 | 265 | 154 | 7 | 119 | 380 | 77 | 327 | 1.12e-48 | 168 |
| MS.gene35642.t1 | AT2G26100 | 36.502 | 263 | 148 | 8 | 122 | 380 | 106 | 353 | 4.21e-48 | 167 |
| MS.gene35642.t1 | AT2G26100 | 37.712 | 236 | 135 | 6 | 122 | 354 | 106 | 332 | 3.18e-45 | 160 |
Find 83 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTACTGCAGTTGGATTA+TGG | 0.220482 | 3.3:-63496618 | MS.gene35642:CDS |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3.3:+63498477 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3.3:-63496568 | MS.gene35642:intron |
| TATAAACGCCTTCTTCTTCT+TGG | 0.252799 | 3.3:+63497744 | None:intergenic |
| TTCTACTGCAGTTGGATTAT+GGG | 0.266499 | 3.3:-63496617 | MS.gene35642:CDS |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3.3:+63498222 | None:intergenic |
| AACATATACATACTGGTTAA+TGG | 0.283163 | 3.3:+63496073 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.289300 | 3.3:-63498480 | MS.gene35642:CDS |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3.3:+63497765 | None:intergenic |
| TATGCGTTGCGTCGTTTGAT+TGG | 0.338393 | 3.3:-63495468 | MS.gene35642:CDS |
| TTCGCATATTTGTGTAAAAT+CGG | 0.343618 | 3.3:+63495739 | None:intergenic |
| CAATTCATTCATGTCATCCT+TGG | 0.361349 | 3.3:+63498006 | None:intergenic |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3.3:-63496137 | MS.gene35642:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3.3:-63496181 | MS.gene35642:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3.3:-63495714 | MS.gene35642:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.370357 | 3.3:-63496108 | MS.gene35642:CDS |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3.3:+63498431 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3.3:+63497759 | None:intergenic |
| TTGTTATCAGATTCATGATT+GGG | 0.391646 | 3.3:-63497421 | MS.gene35642:CDS |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3.3:-63496371 | MS.gene35642:CDS |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3.3:-63496432 | MS.gene35642:intron |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3.3:-63496114 | MS.gene35642:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3.3:-63497459 | MS.gene35642:CDS |
| GCAAGTTTCCATGTTGCAAA+TGG | 0.421353 | 3.3:-63497839 | MS.gene35642:CDS |
| AATTCATTCATGTCATCCTT+GGG | 0.428243 | 3.3:+63498007 | None:intergenic |
| AAGAAGGCGTTTATAGTGAT+AGG | 0.439791 | 3.3:-63497736 | MS.gene35642:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3.3:+63496177 | None:intergenic |
| ATCTTATAGCAACATGTTGA+AGG | 0.454177 | 3.3:-63496676 | MS.gene35642:intron |
| TCTCGTGAAAAGAACTCAAC+TGG | 0.458413 | 3.3:-63497796 | MS.gene35642:CDS |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3.3:-63497446 | MS.gene35642:CDS |
| ATTGTTATCAGATTCATGAT+TGG | 0.460329 | 3.3:-63497422 | MS.gene35642:CDS |
| ACATGGAAACTTGCTTGTCT+AGG | 0.473506 | 3.3:+63497848 | None:intergenic |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3.3:-63497453 | MS.gene35642:CDS |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3.3:-63495387 | MS.gene35642:CDS |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3.3:-63497711 | MS.gene35642:CDS |
| TCACTTGGTTCATGGTTCAT+CGG | 0.476931 | 3.3:-63495706 | MS.gene35642:CDS |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3.3:+63496347 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3.3:+63496826 | None:intergenic |
| GAGATTCAGTTAGAGAAACT+TGG | 0.507141 | 3.3:-63497681 | MS.gene35642:CDS |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3.3:-63495652 | MS.gene35642:intron |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3.3:-63496385 | MS.gene35642:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3.3:+63496170 | None:intergenic |
| CTGGTTAATGGAAATGTAAG+TGG | 0.523439 | 3.3:+63496085 | None:intergenic |
| CATGGAAACTTGCTTGTCTA+GGG | 0.524248 | 3.3:+63497849 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3.3:-63497454 | MS.gene35642:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3.3:-63496397 | MS.gene35642:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3.3:-63495721 | MS.gene35642:CDS |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3.3:-63495397 | MS.gene35642:CDS |
| TGCTAATTCCATTTGCAACA+TGG | 0.541094 | 3.3:+63497831 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3.3:+63497768 | None:intergenic |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3.3:-63496386 | MS.gene35642:CDS |
| TCAGATTCATGATTGGGCAC+AGG | 0.555114 | 3.3:-63497415 | MS.gene35642:intron |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3.3:+63496379 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3.3:-63498154 | MS.gene35642:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3.3:+63496380 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3.3:-63496783 | MS.gene35642:intron |
| TGAAAAGAACTCAACTGGCT+CGG | 0.569102 | 3.3:-63497791 | MS.gene35642:CDS |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3.3:-63495457 | MS.gene35642:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3.3:-63497772 | MS.gene35642:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3.3:+63495639 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3.3:-63498231 | MS.gene35642:CDS |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3.3:+63496118 | None:intergenic |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3.3:-63495496 | MS.gene35642:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3.3:+63496771 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3.3:-63495440 | MS.gene35642:CDS |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3.3:-63496136 | MS.gene35642:CDS |
| AAATGGAATTAGCAGCAGCT+AGG | 0.599100 | 3.3:-63497822 | MS.gene35642:CDS |
| TTGGCATGCTCATCACAACT+AGG | 0.601087 | 3.3:-63498426 | MS.gene35642:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3.3:+63495638 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3.3:-63496396 | MS.gene35642:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3.3:-63497670 | MS.gene35642:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3.3:+63498435 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3.3:+63496129 | None:intergenic |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.624772 | 3.3:-63497752 | MS.gene35642:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3.3:-63495506 | MS.gene35642:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3.3:-63495500 | MS.gene35642:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3.3:-63495403 | MS.gene35642:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3.3:-63495409 | MS.gene35642:CDS |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3.3:-63495510 | MS.gene35642:intron |
| ACAGAAGCAGGAAAAGCCCA+AGG | 0.655089 | 3.3:-63498023 | MS.gene35642:intron |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3.3:-63495664 | MS.gene35642:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3.3:-63498175 | MS.gene35642:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3.3:+63495659 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3.3:63498273-63498292 | None:intergenic | 10.0% |
| !!! | TAATTTTGTGTTTAATTTTT+TGG | - | chr3.3:63495987-63496006 | MS.gene35642:intron | 10.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3.3:63498087-63498106 | MS.gene35642:intron | 15.0% |
| !!! | AAAAAATATGTTCTTGTTTT+GGG | - | chr3.3:63496664-63496683 | MS.gene35642:CDS | 15.0% |
| !!! | TAATATAGTCTATATGATTT+TGG | - | chr3.3:63496476-63496495 | MS.gene35642:intron | 15.0% |
| !!! | TTTTTTATCCCTATTTTTAA+GGG | - | chr3.3:63496320-63496339 | MS.gene35642:intron | 15.0% |
| !! | ATTGATGAAAAAACAAGAAA+TGG | + | chr3.3:63495483-63495502 | None:intergenic | 20.0% |
| !! | CATTATACTCCTAATTTATT+TGG | + | chr3.3:63496571-63496590 | None:intergenic | 20.0% |
| !! | GAAATTACCAAAACAAAATT+TGG | - | chr3.3:63496513-63496532 | MS.gene35642:intron | 20.0% |
| !! | TATGTTATCCCTTTAATATT+GGG | - | chr3.3:63496250-63496269 | MS.gene35642:intron | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3.3:63497142-63497161 | MS.gene35642:intron | 20.0% |
| !! | TTGATGAAAAAACAAGAAAT+GGG | + | chr3.3:63495482-63495501 | None:intergenic | 20.0% |
| !! | TTTATTGTGTGAGAAAAATA+TGG | - | chr3.3:63497133-63497152 | MS.gene35642:intron | 20.0% |
| !!! | ATCTTTAAATTTTTTAGGCA+CGG | + | chr3.3:63498268-63498287 | None:intergenic | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3.3:63496774-63496793 | MS.gene35642:intron | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3.3:63496663-63496682 | MS.gene35642:CDS | 20.0% |
| !!! | GTTTTTTATCCCTATTTTTA+AGG | - | chr3.3:63496319-63496338 | MS.gene35642:intron | 20.0% |
| !!! | TGGTTTGAAATAAAAATCAT+GGG | - | chr3.3:63495532-63495551 | MS.gene35642:intron | 20.0% |
| !!! | TTGGTTTGAAATAAAAATCA+TGG | - | chr3.3:63495531-63495550 | MS.gene35642:intron | 20.0% |
| !!! | TTGTTTTGTTTTTGCTTTTT+TGG | - | chr3.3:63495792-63495811 | MS.gene35642:intron | 20.0% |
| !!! | TTTTGGAGTTTTTTTTTTTG+TGG | - | chr3.3:63495596-63495615 | MS.gene35642:intron | 20.0% |
| !!! | TTTTTATCCCTATTTTTAAG+GGG | - | chr3.3:63496321-63496340 | MS.gene35642:intron | 20.0% |
| ! | AAATAGGGATAAAAAACTCA+AGG | + | chr3.3:63496316-63496335 | None:intergenic | 25.0% |
| ! | AAATTGAGTCAAAGTAAGAT+AGG | + | chr3.3:63496228-63496247 | None:intergenic | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3.3:63495935-63495954 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3.3:63495417-63495436 | None:intergenic | 25.0% |
| ! | ACATGATCTGATCATTTATA+TGG | - | chr3.3:63496962-63496981 | MS.gene35642:intron | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+CGG | + | chr3.3:63496918-63496937 | None:intergenic | 25.0% |
| ! | ATTCTTCATCCCAATATTAA+AGG | + | chr3.3:63496262-63496281 | None:intergenic | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3.3:63496446-63496465 | MS.gene35642:intron | 25.0% |
| ! | CATGATCTGATCATTTATAT+GGG | - | chr3.3:63496963-63496982 | MS.gene35642:intron | 25.0% |
| ! | GTAAAGAAACATATACATAC+TGG | + | chr3.3:63497805-63497824 | None:intergenic | 25.0% |
| ! | GTATGTTATCCCTTTAATAT+TGG | - | chr3.3:63496249-63496268 | MS.gene35642:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3.3:63497369-63497388 | None:intergenic | 25.0% |
| ! | TATCTTACTTTGACTCAATT+TGG | - | chr3.3:63496227-63496246 | MS.gene35642:intron | 25.0% |
| ! | TCGATGAGTTTAATTATGAT+GGG | - | chr3.3:63496344-63496363 | MS.gene35642:intron | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+CGG | + | chr3.3:63498132-63498151 | None:intergenic | 25.0% |
| ! | TTCTTCATCCCAATATTAAA+GGG | + | chr3.3:63496261-63496280 | None:intergenic | 25.0% |
| ! | TTGTTATCAGATTCATGATT+GGG | - | chr3.3:63496447-63496466 | MS.gene35642:intron | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3.3:63497317-63497336 | MS.gene35642:intron | 25.0% |
| ! | TTTATATGGGTTCTACTTAA+TGG | - | chr3.3:63496976-63496995 | MS.gene35642:intron | 25.0% |
| !! | AACATATACATACTGGTTAA+TGG | + | chr3.3:63497798-63497817 | None:intergenic | 25.0% |
| !! | GGTTTGAAATAAAAATCATG+GGG | - | chr3.3:63495533-63495552 | MS.gene35642:intron | 25.0% |
| !! | TGAACTTTATGATCTGATTT+TGG | - | chr3.3:63495579-63495598 | MS.gene35642:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3.3:63496747-63496766 | None:intergenic | 25.0% |
| !!! | AACAAAATTTGGTGTGATTT+AGG | - | chr3.3:63496524-63496543 | MS.gene35642:intron | 25.0% |
| !!! | AATCACACCAAATTTTGTTT+TGG | + | chr3.3:63496523-63496542 | None:intergenic | 25.0% |
| !!! | ATGTTGTTTCTGCATTTATA+GGG | - | chr3.3:63497658-63497677 | MS.gene35642:intron | 25.0% |
| !!! | GTTTAATTTTTTGGATGCTA+GGG | - | chr3.3:63495996-63496015 | MS.gene35642:intron | 25.0% |
| !!! | TGTTTAATTTTTTGGATGCT+AGG | - | chr3.3:63495995-63496014 | MS.gene35642:intron | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3.3:63497405-63497424 | None:intergenic | 25.0% |
| !!! | TTTGGAAACATTTTAACTTG+TGG | + | chr3.3:63497981-63498000 | None:intergenic | 25.0% |
| !!! | TTTGGCTTTATTTTGACATT+TGG | - | chr3.3:63497160-63497179 | MS.gene35642:intron | 25.0% |
| AAAGTAAGTACACTGAATTC+TGG | - | chr3.3:63497535-63497554 | MS.gene35642:intron | 30.0% | |
| AAATATGTGCACTCAAAATG+TGG | - | chr3.3:63498459-63498478 | MS.gene35642:CDS | 30.0% | |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3.3:63496414-63496433 | MS.gene35642:CDS | 30.0% | |
| AATTCATTCATGTCATCCTT+GGG | + | chr3.3:63495864-63495883 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3.3:63497999-63498018 | None:intergenic | 30.0% | |
| ACACTGAATTCTGGATTATT+TGG | - | chr3.3:63497544-63497563 | MS.gene35642:intron | 30.0% | |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3.3:63497524-63497543 | None:intergenic | 30.0% | |
| AGATACATAAAGATTCTTGC+TGG | + | chr3.3:63498044-63498063 | None:intergenic | 30.0% | |
| ATAAACATTAAGCCACAATC+AGG | + | chr3.3:63497629-63497648 | None:intergenic | 30.0% | |
| ATATTGGGATGAAGAATTTG+AGG | - | chr3.3:63496265-63496284 | MS.gene35642:intron | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3.3:63497192-63497211 | MS.gene35642:intron | 30.0% | |
| ATTATCACACCATTTGATTC+AGG | + | chr3.3:63495649-63495668 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3.3:63495929-63495948 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3.3:63495832-63495851 | None:intergenic | 30.0% | |
| GAAAAACAAAGAACTGTAAC+GGG | + | chr3.3:63496917-63496936 | None:intergenic | 30.0% | |
| GTCGATGAGTTTAATTATGA+TGG | - | chr3.3:63496343-63496362 | MS.gene35642:intron | 30.0% | |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3.3:63495827-63495846 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3.3:63497818-63497837 | MS.gene35642:CDS | 30.0% | |
| TGATCAGATCATGTAGTAAT+TGG | + | chr3.3:63496956-63496975 | None:intergenic | 30.0% | |
| TGCAGAAACAACATCAAAAA+TGG | + | chr3.3:63497652-63497671 | None:intergenic | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3.3:63495828-63495847 | None:intergenic | 30.0% | |
| TTAGGAGATAATAACAATGC+AGG | - | chr3.3:63496542-63496561 | MS.gene35642:intron | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3.3:63495394-63495413 | None:intergenic | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3.3:63497760-63497779 | MS.gene35642:CDS | 30.0% |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3.3:63497243-63497262 | MS.gene35642:intron | 30.0% |
| ! | TAATCAAGCACATACCTTTT+TGG | + | chr3.3:63495731-63495750 | None:intergenic | 30.0% |
| ! | TTCATAGTTCTTTGAGTTTG+AGG | + | chr3.3:63496847-63496866 | None:intergenic | 30.0% |
| ! | TTTTGTGTTGTGAGTGATTT+TGG | - | chr3.3:63495512-63495531 | MS.gene35642:intron | 30.0% |
| !! | GATGTTGTTTCTGCATTTAT+AGG | - | chr3.3:63497657-63497676 | MS.gene35642:intron | 30.0% |
| !! | TTTGTTCTTCCATTTTGATC+AGG | - | chr3.3:63496389-63496408 | MS.gene35642:CDS | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3.3:63497415-63497434 | None:intergenic | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3.3:63497406-63497425 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3.3:63495423-63495442 | MS.gene35642:CDS | 30.0% |
| !!! | TTTTGTGGTTTTTTTGTAGC+AGG | - | chr3.3:63495611-63495630 | MS.gene35642:intron | 30.0% |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3.3:63495833-63495852 | MS.gene35642:intron | 30.0% |
| AAAACAAGAAATGGGCAAGA+AGG | + | chr3.3:63495474-63495493 | None:intergenic | 35.0% | |
| AAACAAGAAATGGGCAAGAA+GGG | + | chr3.3:63495473-63495492 | None:intergenic | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3.3:63496415-63496434 | MS.gene35642:CDS | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3.3:63496859-63496878 | MS.gene35642:intron | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3.3:63496409-63496428 | MS.gene35642:CDS | 35.0% | |
| AGTAAGATAGGTTTACCTTG+AGG | + | chr3.3:63496216-63496235 | None:intergenic | 35.0% | |
| AGTTGTTCACCTGATCAAAA+TGG | + | chr3.3:63496401-63496420 | None:intergenic | 35.0% | |
| CAATTCATTCATGTCATCCT+TGG | + | chr3.3:63495865-63495884 | None:intergenic | 35.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3.3:63495388-63495407 | MS.gene35642:CDS | 35.0% | |
| CTCAAGGATAACTAACGTTA+AGG | + | chr3.3:63496300-63496319 | None:intergenic | 35.0% | |
| CTGAATTCTGGATTATTTGG+AGG | - | chr3.3:63497547-63497566 | MS.gene35642:intron | 35.0% | |
| CTGGTTAATGGAAATGTAAG+TGG | + | chr3.3:63497786-63497805 | None:intergenic | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3.3:63496882-63496901 | MS.gene35642:intron | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3.3:63497300-63497319 | MS.gene35642:intron | 35.0% | |
| GAGATTCAGTTAGAGAAACT+TGG | - | chr3.3:63496187-63496206 | MS.gene35642:CDS | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3.3:63498237-63498256 | None:intergenic | 35.0% | |
| GCAGATATATGCAATCTCTA+AGG | - | chr3.3:63497754-63497773 | MS.gene35642:CDS | 35.0% | |
| TACATTGGGTGTATGAAATC+TGG | - | chr3.3:63497497-63497516 | MS.gene35642:intron | 35.0% | |
| TATAAACGCCTTCTTCTTCT+TGG | + | chr3.3:63496127-63496146 | None:intergenic | 35.0% | |
| TCATCGACCCCTTAAAAATA+GGG | + | chr3.3:63496331-63496350 | None:intergenic | 35.0% | |
| TGCAGGTGACCAAATAAATT+AGG | - | chr3.3:63496559-63496578 | MS.gene35642:intron | 35.0% | |
| TGCCATTCAAAAATGTTCCT+CGG | + | chr3.3:63497847-63497866 | None:intergenic | 35.0% | |
| TGCTAATTCCATTTGCAACA+TGG | + | chr3.3:63496040-63496059 | None:intergenic | 35.0% | |
| TTCTACTGCAGTTGGATTAT+GGG | - | chr3.3:63497251-63497270 | MS.gene35642:intron | 35.0% | |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3.3:63497915-63497934 | None:intergenic | 35.0% | |
| TTTCTACTGCAGTTGGATTA+TGG | - | chr3.3:63497250-63497269 | MS.gene35642:intron | 35.0% | |
| ! | AACCGAGGAACATTTTTGAA+TGG | - | chr3.3:63497842-63497861 | MS.gene35642:CDS | 35.0% |
| ! | GATAGTCCTGCAGATTTTAT+TGG | - | chr3.3:63497906-63497925 | MS.gene35642:intron | 35.0% |
| !! | AAGAAGGCGTTTATAGTGAT+AGG | - | chr3.3:63496132-63496151 | MS.gene35642:CDS | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3.3:63497704-63497723 | MS.gene35642:CDS | 35.0% |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3.3:63497414-63497433 | None:intergenic | 35.0% |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3.3:63495818-63495837 | MS.gene35642:intron | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3.3:63497416-63497435 | None:intergenic | 35.0% |
| !!! | GTTTTTTTGTAGCAGGATGT+GGG | - | chr3.3:63495618-63495637 | MS.gene35642:intron | 35.0% |
| !!! | TTATTTTTGTCTGAACCCTC+CGG | + | chr3.3:63497588-63497607 | None:intergenic | 35.0% |
| AAATGGAATTAGCAGCAGCT+AGG | - | chr3.3:63496046-63496065 | MS.gene35642:intron | 40.0% | |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3.3:63498154-63498173 | MS.gene35642:intron | 40.0% | |
| AAGTTGCACTGAAACAACGA+TGG | + | chr3.3:63497022-63497041 | None:intergenic | 40.0% | |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3.3:63497694-63497713 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3.3:63495693-63495712 | MS.gene35642:CDS | 40.0% | |
| AGAGATTGCATATATCTGCC+CGG | + | chr3.3:63497753-63497772 | None:intergenic | 40.0% | |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3.3:63497430-63497449 | None:intergenic | 40.0% | |
| CTCATCGACCCCTTAAAAAT+AGG | + | chr3.3:63496332-63496351 | None:intergenic | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3.3:63498232-63498251 | None:intergenic | 40.0% | |
| GAATAATGATCTGCCTTACC+AGG | + | chr3.3:63497106-63497125 | None:intergenic | 40.0% | |
| GCAAGTTTCCATGTTGCAAA+TGG | - | chr3.3:63496029-63496048 | MS.gene35642:intron | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3.3:63498233-63498252 | None:intergenic | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3.3:63495714-63495733 | MS.gene35642:CDS | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3.3:63496157-63496176 | MS.gene35642:CDS | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3.3:63498471-63498490 | MS.gene35642:CDS | 40.0% | |
| TCACTTGGTTCATGGTTCAT+CGG | - | chr3.3:63498162-63498181 | MS.gene35642:CDS | 40.0% | |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3.3:63497701-63497720 | None:intergenic | 40.0% | |
| TCTCGTGAAAAGAACTCAAC+TGG | - | chr3.3:63496072-63496091 | MS.gene35642:intron | 40.0% | |
| TGAAAAGAACTCAACTGGCT+CGG | - | chr3.3:63496077-63496096 | MS.gene35642:intron | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3.3:63498234-63498253 | None:intergenic | 40.0% | |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3.3:63495440-63495459 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3.3:63497436-63497455 | MS.gene35642:CDS | 40.0% | |
| ! | ACATGGAAACTTGCTTGTCT+AGG | + | chr3.3:63496023-63496042 | None:intergenic | 40.0% |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3.3:63497687-63497706 | MS.gene35642:CDS | 40.0% |
| ! | CATGGAAACTTGCTTGTCTA+GGG | + | chr3.3:63496022-63496041 | None:intergenic | 40.0% |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3.3:63497695-63497714 | MS.gene35642:CDS | 40.0% |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3.3:63497413-63497432 | None:intergenic | 40.0% |
| !!! | GGTTTTTTTGTAGCAGGATG+TGG | - | chr3.3:63495617-63495636 | MS.gene35642:intron | 40.0% |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3.3:63496872-63496891 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3.3:63497703-63497722 | MS.gene35642:CDS | 40.0% |
| AAATACTTCCGACACGCAAC+CGG | - | chr3.3:63497731-63497750 | MS.gene35642:CDS | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3.3:63498358-63498377 | MS.gene35642:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3.3:63496198-63496217 | MS.gene35642:intron | 45.0% | |
| AGCCAACTGCCAAGTGATAT+TGG | + | chr3.3:63496894-63496913 | None:intergenic | 45.0% | |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3.3:63497386-63497405 | None:intergenic | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3.3:63496116-63496135 | MS.gene35642:CDS | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3.3:63497491-63497510 | None:intergenic | 45.0% | |
| ATCGGCCTGCAATCATAATG+AGG | + | chr3.3:63498114-63498133 | None:intergenic | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3.3:63497483-63497502 | MS.gene35642:intron | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3.3:63497428-63497447 | MS.gene35642:CDS | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3.3:63496422-63496441 | MS.gene35642:intron | 45.0% | |
| GACCAATATCACTTGGCAGT+TGG | - | chr3.3:63496889-63496908 | MS.gene35642:intron | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3.3:63498106-63498125 | MS.gene35642:intron | 45.0% | |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3.3:63495436-63495455 | None:intergenic | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3.3:63498147-63498166 | MS.gene35642:intron | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3.3:63497392-63497411 | None:intergenic | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3.3:63498465-63498484 | MS.gene35642:CDS | 45.0% | |
| GTTCCTCGGTTGCCAAATTA+AGG | + | chr3.3:63497833-63497852 | None:intergenic | 45.0% | |
| TATGCGTTGCGTCGTTTGAT+TGG | - | chr3.3:63498400-63498419 | MS.gene35642:intron | 45.0% | |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3.3:63497482-63497501 | MS.gene35642:intron | 45.0% | |
| TCAGATTCATGATTGGGCAC+AGG | - | chr3.3:63496453-63496472 | MS.gene35642:intron | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3.3:63495637-63495656 | MS.gene35642:intron | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3.3:63497622-63497641 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3.3:63495442-63495461 | MS.gene35642:CDS | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3.3:63497045-63497064 | None:intergenic | 45.0% |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3.3:63497827-63497846 | MS.gene35642:CDS | 45.0% |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3.3:63497468-63497487 | None:intergenic | 45.0% |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3.3:63497090-63497109 | MS.gene35642:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3.3:63497732-63497751 | MS.gene35642:CDS | 50.0% | |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3.3:63497085-63497104 | MS.gene35642:intron | 50.0% | |
| ACAGAAGCAGGAAAAGCCCA+AGG | - | chr3.3:63495845-63495864 | MS.gene35642:intron | 50.0% | |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3.3:63496103-63496122 | None:intergenic | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3.3:63498428-63498447 | MS.gene35642:CDS | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3.3:63497492-63497511 | None:intergenic | 50.0% | |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3.3:63497472-63497491 | MS.gene35642:intron | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3.3:63497614-63497633 | MS.gene35642:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3.3:63498481-63498500 | MS.gene35642:CDS | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3.3:63498411-63498430 | MS.gene35642:intron | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3.3:63498362-63498381 | MS.gene35642:intron | 50.0% | |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3.3:63496112-63496131 | None:intergenic | 50.0% |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3.3:63496106-63496125 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3.3:63497475-63497494 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3.3:63497474-63497493 | None:intergenic | 50.0% |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3.3:63497469-63497488 | None:intergenic | 50.0% |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3.3:63497742-63497761 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3.3:63497471-63497490 | MS.gene35642:intron | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3.3:63498204-63498223 | MS.gene35642:CDS | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3.3:63498212-63498231 | None:intergenic | 55.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3.3:63496096-63496115 | MS.gene35642:CDS | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3.3:63497579-63497598 | None:intergenic | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3.3:63497100-63497119 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3.3:63498368-63498387 | MS.gene35642:intron | 55.0% |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3.3:63498216-63498235 | MS.gene35642:CDS | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3.3:63497570-63497589 | MS.gene35642:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3.3:63497578-63497597 | None:intergenic | 60.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3.3:63497566-63497585 | MS.gene35642:intron | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3.3:63497580-63497599 | None:intergenic | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3.3:63498372-63498391 | MS.gene35642:intron | 60.0% |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3.3:63497569-63497588 | MS.gene35642:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3.3:63497573-63497592 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 63495372 | 63498518 | 63495372 | ID=MS.gene35642 |
| chr3.3 | mRNA | 63495372 | 63498518 | 63495372 | ID=MS.gene35642.t1;Parent=MS.gene35642 |
| chr3.3 | exon | 63498427 | 63498518 | 63498427 | ID=MS.gene35642.t1.exon1;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63498427 | 63498518 | 63498427 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63498155 | 63498257 | 63498155 | ID=MS.gene35642.t1.exon2;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63498155 | 63498257 | 63498155 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63497983 | 63498041 | 63497983 | ID=MS.gene35642.t1.exon3;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63497983 | 63498041 | 63497983 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63497671 | 63497873 | 63497671 | ID=MS.gene35642.t1.exon4;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63497671 | 63497873 | 63497671 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63497416 | 63497479 | 63497416 | ID=MS.gene35642.t1.exon5;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63497416 | 63497479 | 63497416 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63496784 | 63496856 | 63496784 | ID=MS.gene35642.t1.exon6;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63496784 | 63496856 | 63496784 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63496569 | 63496689 | 63496569 | ID=MS.gene35642.t1.exon7;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63496569 | 63496689 | 63496569 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63496353 | 63496440 | 63496353 | ID=MS.gene35642.t1.exon8;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63496353 | 63496440 | 63496353 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63496086 | 63496211 | 63496086 | ID=MS.gene35642.t1.exon9;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63496086 | 63496211 | 63496086 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63495653 | 63495762 | 63495653 | ID=MS.gene35642.t1.exon10;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63495653 | 63495762 | 63495653 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| chr3.3 | exon | 63495372 | 63495520 | 63495372 | ID=MS.gene35642.t1.exon11;Parent=MS.gene35642.t1 |
| chr3.3 | CDS | 63495372 | 63495520 | 63495372 | ID=cds.MS.gene35642.t1;Parent=MS.gene35642.t1 |
| Gene Sequence |
| Protein sequence |
