Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29036.t1 | XP_003601132.1 | 94.2 | 396 | 23 | 0 | 1 | 396 | 1 | 396 | 2.50E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29036.t1 | Q6NQB7 | 70.2 | 406 | 96 | 10 | 1 | 395 | 1 | 392 | 6.5e-157 | 555.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29036.t1 | G7J459 | 94.2 | 396 | 23 | 0 | 1 | 396 | 1 | 396 | 1.8e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene29036 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene29036 | 0.836348 | 9.87E-57 | -1.69E-46 |
| MS.gene04920 | MS.gene29036 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene29036 | 0.829225 | 5.80E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene29036 | 0.851424 | 8.95E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene29036 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene049413 | MS.gene29036 | 0.803505 | 3.38E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene29036 | 0.859299 | 4.55E-63 | -1.69E-46 |
| MS.gene049652 | MS.gene29036 | 0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene29036 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene29036 | 0.814547 | 1.46E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene29036 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene04998 | MS.gene29036 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene050238 | MS.gene29036 | 0.831718 | 1.42E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene29036 | 0.802728 | 4.89E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene29036 | 0.822684 | 2.08E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene29036 | 0.83604 | 1.18E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene29036 | 0.833807 | 4.31E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene29036 | 0.841853 | 3.69E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene29036 | 0.833549 | 5.00E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene29036 | 0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene050961 | MS.gene29036 | 0.806526 | 7.88E-50 | -1.69E-46 |
| MS.gene051043 | MS.gene29036 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene051121 | MS.gene29036 | 0.81781 | 2.72E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene29036 | 0.801066 | 1.07E-48 | -1.69E-46 |
| MS.gene051234 | MS.gene29036 | 0.80774 | 4.36E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene29036 | 0.855849 | 4.79E-62 | -1.69E-46 |
| MS.gene051332 | MS.gene29036 | 0.807152 | 5.81E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene29036 | 0.834981 | 2.19E-56 | -1.69E-46 |
| MS.gene051676 | MS.gene29036 | 0.806798 | 6.90E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene29036 | 0.838875 | 2.22E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene29036 | 0.845631 | 3.60E-59 | -1.69E-46 |
| MS.gene051832 | MS.gene29036 | 0.82885 | 7.15E-55 | -1.69E-46 |
| MS.gene051848 | MS.gene29036 | -0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene29036 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene05191 | MS.gene29036 | 0.807617 | 4.63E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene29036 | 0.834262 | 3.32E-56 | -1.69E-46 |
| MS.gene051960 | MS.gene29036 | 0.831865 | 1.31E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene29036 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene29036 | 0.867775 | 1.07E-65 | -1.69E-46 |
| MS.gene052037 | MS.gene29036 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene29036 | 0.847785 | 9.28E-60 | -1.69E-46 |
| MS.gene052239 | MS.gene29036 | -0.810289 | 1.24E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene29036 | 0.824304 | 8.68E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene29036 | 0.838679 | 2.49E-57 | -1.69E-46 |
| MS.gene052493 | MS.gene29036 | 0.861725 | 8.38E-64 | -1.69E-46 |
| MS.gene052533 | MS.gene29036 | 0.841016 | 6.13E-58 | -1.69E-46 |
| MS.gene052534 | MS.gene29036 | 0.818973 | 1.48E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene29036 | 0.830582 | 2.71E-55 | -1.69E-46 |
| MS.gene052681 | MS.gene29036 | 0.823504 | 1.34E-53 | -1.69E-46 |
| MS.gene052685 | MS.gene29036 | 0.813716 | 2.22E-51 | -1.69E-46 |
| MS.gene052889 | MS.gene29036 | 0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene29036 | 0.805276 | 1.44E-49 | -1.69E-46 |
| MS.gene053094 | MS.gene29036 | 0.836534 | 8.84E-57 | -1.69E-46 |
| MS.gene053143 | MS.gene29036 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene053151 | MS.gene29036 | 0.804233 | 2.38E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene29036 | 0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene053620 | MS.gene29036 | 0.817548 | 3.12E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene29036 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene29036 | 0.826422 | 2.74E-54 | -1.69E-46 |
| MS.gene05410 | MS.gene29036 | 0.814148 | 1.79E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene29036 | 0.832174 | 1.10E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene29036 | 0.846115 | 2.66E-59 | -1.69E-46 |
| MS.gene05423 | MS.gene29036 | 0.823129 | 1.64E-53 | -1.69E-46 |
| MS.gene05439 | MS.gene29036 | 0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene29036 | 0.811103 | 8.28E-51 | -1.69E-46 |
| MS.gene054489 | MS.gene29036 | 0.82129 | 4.37E-53 | -1.69E-46 |
| MS.gene05454 | MS.gene29036 | 0.842093 | 3.19E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene29036 | 0.857877 | 1.21E-62 | -1.69E-46 |
| MS.gene05458 | MS.gene29036 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene29036 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene29036 | 0.916178 | 2.43E-85 | -1.69E-46 |
| MS.gene054893 | MS.gene29036 | 0.913144 | 8.65E-84 | -1.69E-46 |
| MS.gene054957 | MS.gene29036 | 0.8137 | 2.24E-51 | -1.69E-46 |
| MS.gene055141 | MS.gene29036 | 0.855739 | 5.15E-62 | -1.69E-46 |
| MS.gene055147 | MS.gene29036 | 0.824819 | 6.56E-54 | -1.69E-46 |
| MS.gene055148 | MS.gene29036 | 0.80738 | 5.20E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene29036 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene055150 | MS.gene29036 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene055226 | MS.gene29036 | 0.818315 | 2.09E-52 | -1.69E-46 |
| MS.gene055229 | MS.gene29036 | 0.830636 | 2.63E-55 | -1.69E-46 |
| MS.gene055231 | MS.gene29036 | 0.823521 | 1.32E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene29036 | 0.828301 | 9.70E-55 | -1.69E-46 |
| MS.gene05539 | MS.gene29036 | 0.826875 | 2.13E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene29036 | 0.836519 | 8.93E-57 | -1.69E-46 |
| MS.gene05552 | MS.gene29036 | 0.81546 | 9.14E-52 | -1.69E-46 |
| MS.gene055724 | MS.gene29036 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene055827 | MS.gene29036 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene29036 | 0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene29036 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene05624 | MS.gene29036 | 0.860599 | 1.85E-63 | -1.69E-46 |
| MS.gene056677 | MS.gene29036 | 0.877186 | 7.69E-69 | -1.69E-46 |
| MS.gene056699 | MS.gene29036 | 0.844239 | 8.55E-59 | -1.69E-46 |
| MS.gene05686 | MS.gene29036 | 0.866739 | 2.29E-65 | -1.69E-46 |
| MS.gene05690 | MS.gene29036 | 0.832965 | 7.00E-56 | -1.69E-46 |
| MS.gene056973 | MS.gene29036 | 0.800161 | 1.64E-48 | -1.69E-46 |
| MS.gene057034 | MS.gene29036 | 0.808642 | 2.80E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene29036 | 0.865694 | 4.90E-65 | -1.69E-46 |
| MS.gene057155 | MS.gene29036 | 0.80593 | 1.05E-49 | -1.69E-46 |
| MS.gene057174 | MS.gene29036 | 0.814738 | 1.32E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene29036 | 0.821506 | 3.89E-53 | -1.69E-46 |
| MS.gene057622 | MS.gene29036 | 0.823078 | 1.68E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene29036 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene29036 | 0.801233 | 9.92E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene29036 | 0.86562 | 5.18E-65 | -1.69E-46 |
| MS.gene058159 | MS.gene29036 | 0.870242 | 1.69E-66 | -1.69E-46 |
| MS.gene058279 | MS.gene29036 | 0.8413 | 5.16E-58 | -1.69E-46 |
| MS.gene058289 | MS.gene29036 | 0.822084 | 2.86E-53 | -1.69E-46 |
| MS.gene058317 | MS.gene29036 | 0.811722 | 6.07E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene29036 | 0.835591 | 1.53E-56 | -1.69E-46 |
| MS.gene058592 | MS.gene29036 | 0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene058781 | MS.gene29036 | 0.832527 | 8.98E-56 | -1.69E-46 |
| MS.gene05878 | MS.gene29036 | 0.824386 | 8.30E-54 | -1.69E-46 |
| MS.gene05897 | MS.gene29036 | 0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene29036 | 0.822624 | 2.14E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene29036 | 0.874707 | 5.47E-68 | -1.69E-46 |
| MS.gene059439 | MS.gene29036 | 0.80937 | 1.96E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene29036 | 0.872342 | 3.42E-67 | -1.69E-46 |
| MS.gene05956 | MS.gene29036 | 0.804823 | 1.80E-49 | -1.69E-46 |
| MS.gene059686 | MS.gene29036 | 0.803063 | 4.17E-49 | -1.69E-46 |
| MS.gene059774 | MS.gene29036 | 0.885161 | 1.03E-71 | -1.69E-46 |
| MS.gene05985 | MS.gene29036 | -0.870894 | 1.03E-66 | -1.69E-46 |
| MS.gene059901 | MS.gene29036 | -0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene29036 | 0.824671 | 7.12E-54 | -1.69E-46 |
| MS.gene060012 | MS.gene29036 | 0.822685 | 2.08E-53 | -1.69E-46 |
| MS.gene06023 | MS.gene29036 | 0.808158 | 3.55E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene29036 | 0.832179 | 1.10E-55 | -1.69E-46 |
| MS.gene060258 | MS.gene29036 | 0.80893 | 2.43E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene29036 | 0.84604 | 2.79E-59 | -1.69E-46 |
| MS.gene060338 | MS.gene29036 | 0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene29036 | 0.810492 | 1.12E-50 | -1.69E-46 |
| MS.gene060373 | MS.gene29036 | 0.815034 | 1.14E-51 | -1.69E-46 |
| MS.gene060412 | MS.gene29036 | 0.842247 | 2.91E-58 | -1.69E-46 |
| MS.gene060413 | MS.gene29036 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene29036 | 0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene29036 | 0.83385 | 4.21E-56 | -1.69E-46 |
| MS.gene060522 | MS.gene29036 | 0.843644 | 1.23E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene29036 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene060697 | MS.gene29036 | 0.881418 | 2.44E-70 | -1.69E-46 |
| MS.gene060716 | MS.gene29036 | 0.833328 | 5.68E-56 | -1.69E-46 |
| MS.gene060777 | MS.gene29036 | 0.82732 | 1.67E-54 | -1.69E-46 |
| MS.gene060785 | MS.gene29036 | 0.829651 | 4.57E-55 | -1.69E-46 |
| MS.gene060840 | MS.gene29036 | 0.829783 | 4.24E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene29036 | 0.850347 | 1.80E-60 | -1.69E-46 |
| MS.gene060933 | MS.gene29036 | 0.84686 | 1.67E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene29036 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene29036 | 0.845819 | 3.20E-59 | -1.69E-46 |
| MS.gene061047 | MS.gene29036 | 0.827409 | 1.59E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene29036 | 0.861885 | 7.49E-64 | -1.69E-46 |
| MS.gene061160 | MS.gene29036 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene061188 | MS.gene29036 | 0.869508 | 2.94E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29096 | MS.gene29036 | PPI |
| MS.gene35642 | MS.gene29036 | PPI |
| MS.gene30750 | MS.gene29036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29036.t1 | MTR_3g073370 | 99.242 | 396 | 3 | 0 | 1 | 396 | 1 | 396 | 0.0 | 822 |
| MS.gene29036.t1 | MTR_3g073370 | 98.990 | 396 | 3 | 1 | 1 | 396 | 1 | 395 | 0.0 | 816 |
| MS.gene29036.t1 | MTR_4g048320 | 63.291 | 395 | 136 | 4 | 9 | 396 | 15 | 407 | 0.0 | 524 |
| MS.gene29036.t1 | MTR_4g035490 | 62.016 | 387 | 131 | 5 | 10 | 393 | 7 | 380 | 0.0 | 514 |
| MS.gene29036.t1 | MTR_2g088270 | 62.148 | 391 | 142 | 4 | 9 | 396 | 15 | 402 | 0.0 | 509 |
| MS.gene29036.t1 | MTR_4g048320 | 66.667 | 348 | 109 | 2 | 52 | 396 | 6 | 349 | 1.50e-178 | 501 |
| MS.gene29036.t1 | MTR_4g013305 | 56.716 | 402 | 135 | 4 | 1 | 396 | 10 | 378 | 5.58e-165 | 468 |
| MS.gene29036.t1 | MTR_5g009700 | 41.389 | 360 | 167 | 8 | 19 | 374 | 23 | 342 | 4.57e-84 | 260 |
| MS.gene29036.t1 | MTR_3g090600 | 38.919 | 370 | 180 | 8 | 7 | 374 | 17 | 342 | 1.21e-81 | 254 |
| MS.gene29036.t1 | MTR_5g009700 | 46.953 | 279 | 124 | 4 | 97 | 374 | 1 | 256 | 1.83e-81 | 250 |
| MS.gene29036.t1 | MTR_3g090600 | 38.919 | 370 | 178 | 9 | 7 | 374 | 17 | 340 | 4.53e-80 | 249 |
| MS.gene29036.t1 | MTR_1g012800 | 38.671 | 331 | 179 | 5 | 16 | 345 | 29 | 336 | 5.31e-72 | 229 |
| MS.gene29036.t1 | MTR_3g090600 | 39.241 | 316 | 162 | 8 | 7 | 317 | 17 | 307 | 6.17e-66 | 212 |
| MS.gene29036.t1 | MTR_3g090600 | 39.241 | 316 | 160 | 9 | 7 | 317 | 17 | 305 | 2.77e-64 | 208 |
| MS.gene29036.t1 | MTR_8g463930 | 36.071 | 280 | 163 | 8 | 107 | 383 | 62 | 328 | 1.80e-50 | 173 |
| MS.gene29036.t1 | MTR_2g078030 | 34.752 | 282 | 167 | 7 | 103 | 381 | 53 | 320 | 2.61e-49 | 170 |
| MS.gene29036.t1 | MTR_2g078030 | 36.546 | 249 | 148 | 5 | 103 | 349 | 53 | 293 | 2.11e-47 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29036.t1 | AT1G77810 | 71.859 | 398 | 96 | 8 | 1 | 396 | 1 | 384 | 0.0 | 580 |
| MS.gene29036.t1 | AT1G77810 | 71.322 | 401 | 96 | 9 | 1 | 396 | 1 | 387 | 0.0 | 575 |
| MS.gene29036.t1 | AT1G05170 | 63.038 | 395 | 137 | 4 | 9 | 396 | 15 | 407 | 0.0 | 530 |
| MS.gene29036.t1 | AT1G22015 | 64.541 | 392 | 136 | 3 | 3 | 394 | 5 | 393 | 0.0 | 529 |
| MS.gene29036.t1 | AT1G32930 | 60.606 | 396 | 146 | 3 | 5 | 396 | 10 | 399 | 0.0 | 514 |
| MS.gene29036.t1 | AT1G33430 | 63.542 | 384 | 130 | 5 | 10 | 388 | 7 | 385 | 1.05e-179 | 505 |
| MS.gene29036.t1 | AT2G32430 | 61.772 | 395 | 143 | 3 | 9 | 396 | 16 | 409 | 6.33e-179 | 504 |
| MS.gene29036.t1 | AT1G33430 | 62.245 | 392 | 130 | 6 | 10 | 388 | 7 | 393 | 1.20e-176 | 498 |
| MS.gene29036.t1 | AT4G26940 | 61.990 | 392 | 142 | 5 | 9 | 396 | 19 | 407 | 3.46e-176 | 497 |
| MS.gene29036.t1 | AT1G11730 | 59.948 | 387 | 133 | 7 | 9 | 394 | 17 | 382 | 5.01e-163 | 462 |
| MS.gene29036.t1 | AT1G05170 | 60.983 | 346 | 126 | 4 | 9 | 347 | 15 | 358 | 1.98e-155 | 442 |
| MS.gene29036.t1 | AT1G33430 | 60.261 | 307 | 112 | 5 | 10 | 311 | 7 | 308 | 2.00e-125 | 364 |
| MS.gene29036.t1 | AT4G26940 | 55.472 | 265 | 112 | 4 | 9 | 269 | 19 | 281 | 1.62e-91 | 278 |
| MS.gene29036.t1 | AT5G53340 | 41.772 | 316 | 167 | 7 | 48 | 361 | 37 | 337 | 2.39e-80 | 250 |
| MS.gene29036.t1 | AT5G53340 | 42.953 | 298 | 160 | 5 | 48 | 343 | 37 | 326 | 2.50e-80 | 250 |
| MS.gene29036.t1 | AT2G25300 | 45.560 | 259 | 132 | 4 | 88 | 345 | 8 | 258 | 6.77e-73 | 229 |
| MS.gene29036.t1 | AT2G25300 | 40.240 | 333 | 169 | 9 | 16 | 345 | 31 | 336 | 2.59e-72 | 230 |
| MS.gene29036.t1 | AT4G32120 | 44.788 | 259 | 134 | 4 | 88 | 345 | 85 | 335 | 7.04e-71 | 226 |
| MS.gene29036.t1 | AT1G53290 | 35.273 | 275 | 161 | 7 | 112 | 383 | 71 | 331 | 5.20e-50 | 172 |
| MS.gene29036.t1 | AT3G14960 | 35.472 | 265 | 154 | 7 | 120 | 381 | 77 | 327 | 1.03e-48 | 169 |
| MS.gene29036.t1 | AT2G26100 | 36.502 | 263 | 148 | 8 | 123 | 381 | 106 | 353 | 4.64e-48 | 167 |
| MS.gene29036.t1 | AT2G26100 | 37.712 | 236 | 135 | 6 | 123 | 355 | 106 | 332 | 3.50e-45 | 159 |
Find 78 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCATATTTGTGTAAAAT+TGG | 0.192644 | 3.2:+66186790 | None:intergenic |
| TATAAATGCCTTCTTCTTCT+TGG | 0.218514 | 3.2:+66188788 | None:intergenic |
| TTTCTACTGCAGTTGGATTA+TGG | 0.220482 | 3.2:-66187669 | MS.gene29036:CDS |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3.2:+66189517 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3.2:-66187619 | MS.gene29036:intron |
| AACATATACGTACTGGTTAA+TGG | 0.250748 | 3.2:+66187124 | None:intergenic |
| TTCTACTGCAGTTGGATTAT+GGG | 0.266499 | 3.2:-66187668 | MS.gene29036:CDS |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3.2:+66189267 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.289300 | 3.2:-66189520 | MS.gene29036:CDS |
| CATTGAAACTTGCTTGTCTA+AGG | 0.304646 | 3.2:+66188893 | None:intergenic |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3.2:+66188809 | None:intergenic |
| TCACTTGGTTCATGGTTCAT+TGG | 0.354905 | 3.2:-66186757 | MS.gene29036:CDS |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3.2:-66187188 | MS.gene29036:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3.2:-66187232 | MS.gene29036:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3.2:-66186765 | MS.gene29036:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.370357 | 3.2:-66187159 | MS.gene29036:CDS |
| TTTGCGTTGCGTCGTTTGAT+TGG | 0.371994 | 3.2:-66186519 | MS.gene29036:CDS |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3.2:+66189471 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3.2:+66188803 | None:intergenic |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3.2:-66187422 | MS.gene29036:CDS |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3.2:-66187483 | MS.gene29036:intron |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3.2:-66187165 | MS.gene29036:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3.2:-66188502 | MS.gene29036:CDS |
| AATTCATTCATGTCATCCTT+AGG | 0.423227 | 3.2:+66189052 | None:intergenic |
| ATTGTTATCAGATTCATGAT+TGG | 0.426162 | 3.2:-66188465 | MS.gene29036:CDS |
| AAGAAGGCATTTATAGTGAT+AGG | 0.426783 | 3.2:-66188780 | MS.gene29036:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3.2:+66187228 | None:intergenic |
| GCAAGTTTCAATGCTGCAAA+TGG | 0.451916 | 3.2:-66188883 | MS.gene29036:CDS |
| ATCTTATAGCAACATGTTGA+AGG | 0.454177 | 3.2:-66187727 | MS.gene29036:intron |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3.2:-66188489 | MS.gene29036:CDS |
| TCTCGCGAAAAGAACTCAAC+TGG | 0.473406 | 3.2:-66188840 | MS.gene29036:CDS |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3.2:-66188496 | MS.gene29036:CDS |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3.2:-66186438 | MS.gene29036:CDS |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3.2:-66188755 | MS.gene29036:CDS |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3.2:+66187398 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3.2:+66187877 | None:intergenic |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3.2:-66186703 | MS.gene29036:intron |
| GTGATTCAGTTAGAGAAACT+TGG | 0.516772 | 3.2:-66188725 | MS.gene29036:CDS |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3.2:-66187436 | MS.gene29036:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3.2:+66187221 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3.2:-66188497 | MS.gene29036:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3.2:-66187448 | MS.gene29036:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3.2:-66186772 | MS.gene29036:CDS |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3.2:-66186448 | MS.gene29036:CDS |
| CTGGTTAATGGAAATGTAAG+TGG | 0.540832 | 3.2:+66187136 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3.2:+66188812 | None:intergenic |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3.2:-66187437 | MS.gene29036:CDS |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3.2:+66187430 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3.2:-66189199 | MS.gene29036:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3.2:+66187431 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3.2:-66187834 | MS.gene29036:intron |
| ACAGAAGCAGGAAAAGCCTA+AGG | 0.573076 | 3.2:-66189068 | MS.gene29036:intron |
| TCAGATTCATGATTGGCCAC+AGG | 0.573731 | 3.2:-66188458 | MS.gene29036:intron |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3.2:-66186508 | MS.gene29036:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3.2:-66188816 | MS.gene29036:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3.2:+66186690 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3.2:-66189276 | MS.gene29036:CDS |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3.2:+66187169 | None:intergenic |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3.2:-66186547 | MS.gene29036:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3.2:+66187822 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3.2:-66186491 | MS.gene29036:CDS |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3.2:-66187187 | MS.gene29036:CDS |
| TTGGCATGCTCATCACAACT+AGG | 0.601087 | 3.2:-66189466 | MS.gene29036:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3.2:+66186689 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3.2:-66187447 | MS.gene29036:CDS |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.605321 | 3.2:-66188796 | MS.gene29036:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3.2:-66188714 | MS.gene29036:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3.2:+66189475 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3.2:+66187180 | None:intergenic |
| CGAAAAGAACTCAACTGGCT+CGG | 0.614371 | 3.2:-66188835 | MS.gene29036:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3.2:-66186557 | MS.gene29036:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3.2:-66186551 | MS.gene29036:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3.2:-66186454 | MS.gene29036:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3.2:-66186460 | MS.gene29036:CDS |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3.2:-66186561 | MS.gene29036:intron |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3.2:-66186715 | MS.gene29036:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3.2:-66189220 | MS.gene29036:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3.2:+66186710 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3.2:66189313-66189332 | None:intergenic | 10.0% |
| !!! | TAATTTGATTTTTAATTTCT+TGG | - | chr3.2:66187034-66187053 | MS.gene29036:intron | 10.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3.2:66189127-66189146 | MS.gene29036:intron | 15.0% |
| !! | TAAGAAAGAATATTATATGT+CGG | + | chr3.2:66189105-66189124 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGTAGC+AGG | - | chr3.2:66186657-66186676 | MS.gene29036:intron | 15.0% |
| !! | ATTGATGAAAAAACAAGAAA+TGG | + | chr3.2:66186534-66186553 | None:intergenic | 20.0% |
| !! | CATTATACTCCTAATTTATT+CGG | + | chr3.2:66187619-66187638 | None:intergenic | 20.0% |
| !! | TAATATAGTCTATATGATTC+TGG | - | chr3.2:66187524-66187543 | MS.gene29036:intron | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3.2:66188182-66188201 | MS.gene29036:intron | 20.0% |
| !! | TTGATGAAAAAACAAGAAAT+GGG | + | chr3.2:66186533-66186552 | None:intergenic | 20.0% |
| !! | TTTATATGGATTCTACTTAA+TGG | - | chr3.2:66188016-66188035 | MS.gene29036:intron | 20.0% |
| !! | TTTATTGTGTGAGAAAAATA+TGG | - | chr3.2:66188173-66188192 | MS.gene29036:intron | 20.0% |
| !!! | AGTTTTTATCCCTATTTTTT+AGG | - | chr3.2:66187367-66187386 | MS.gene29036:intron | 20.0% |
| !!! | ATCTTATTTAAGACTCAATT+TGG | - | chr3.2:66187275-66187294 | MS.gene29036:intron | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3.2:66187821-66187840 | MS.gene29036:intron | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3.2:66187711-66187730 | MS.gene29036:CDS | 20.0% |
| !!! | GTTTTTATCCCTATTTTTTA+GGG | - | chr3.2:66187368-66187387 | MS.gene29036:intron | 20.0% |
| !!! | TTTTTATCCCTATTTTTTAG+GGG | - | chr3.2:66187369-66187388 | MS.gene29036:intron | 20.0% |
| ! | AAAATAGGGATAAAAACTCA+AGG | + | chr3.2:66187365-66187384 | None:intergenic | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3.2:66186981-66187000 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3.2:66186468-66186487 | None:intergenic | 25.0% |
| ! | ACATGATCTGTTCATTTATA+TGG | - | chr3.2:66188002-66188021 | MS.gene29036:intron | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+AGG | + | chr3.2:66187958-66187977 | None:intergenic | 25.0% |
| ! | ATATTGGGATGAAAAATTTG+AGG | - | chr3.2:66187313-66187332 | MS.gene29036:intron | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3.2:66187494-66187513 | MS.gene29036:intron | 25.0% |
| ! | GAAAAACAAAGAACTGTAAA+GGG | + | chr3.2:66187957-66187976 | None:intergenic | 25.0% |
| ! | GAAACTACCAAAACAAAATT+TGG | - | chr3.2:66187561-66187580 | MS.gene29036:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3.2:66188409-66188428 | None:intergenic | 25.0% |
| ! | TATGATATCCCTTTGATATT+GGG | - | chr3.2:66187298-66187317 | MS.gene29036:intron | 25.0% |
| ! | TGAACTTTATGATCTGATTT+AGG | - | chr3.2:66186630-66186649 | MS.gene29036:intron | 25.0% |
| ! | TTAGGAGATAATAACAATGA+AGG | - | chr3.2:66187590-66187609 | MS.gene29036:intron | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+TGG | + | chr3.2:66189172-66189191 | None:intergenic | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3.2:66188357-66188376 | MS.gene29036:intron | 25.0% |
| !! | ATTTTTCATCCCAATATCAA+AGG | + | chr3.2:66187310-66187329 | None:intergenic | 25.0% |
| !! | TGGTTTGAAATCAAAATCAT+GGG | - | chr3.2:66186583-66186602 | MS.gene29036:intron | 25.0% |
| !! | TTGGTTTGAAATCAAAATCA+TGG | - | chr3.2:66186582-66186601 | MS.gene29036:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3.2:66187794-66187813 | None:intergenic | 25.0% |
| !! | TTTTTCATCCCAATATCAAA+GGG | + | chr3.2:66187309-66187328 | None:intergenic | 25.0% |
| !!! | AACAAAATTTGGTGTGATTT+AGG | - | chr3.2:66187572-66187591 | MS.gene29036:intron | 25.0% |
| !!! | AATAAGATAGTTTTACCTTG+AGG | + | chr3.2:66187263-66187282 | None:intergenic | 25.0% |
| !!! | AATCACACCAAATTTTGTTT+TGG | + | chr3.2:66187571-66187590 | None:intergenic | 25.0% |
| !!! | GGTCACTTGATTATTTTTAT+TGG | - | chr3.2:66187842-66187861 | MS.gene29036:CDS | 25.0% |
| !!! | GTGTGTTATTTTTGCTTTTT+TGG | - | chr3.2:66186838-66186857 | MS.gene29036:intron | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3.2:66188445-66188464 | None:intergenic | 25.0% |
| !!! | TTTGGCTTAATTTTGACATT+TGG | - | chr3.2:66188200-66188219 | MS.gene29036:intron | 25.0% |
| !!! | TTTTAATTTCTTGGATTCCA+GGG | - | chr3.2:66187043-66187062 | MS.gene29036:intron | 25.0% |
| !!! | TTTTTAATTTCTTGGATTCC+AGG | - | chr3.2:66187042-66187061 | MS.gene29036:intron | 25.0% |
| AAATATGTGCACTCAAAATG+TGG | - | chr3.2:66189499-66189518 | MS.gene29036:CDS | 30.0% | |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3.2:66187462-66187481 | MS.gene29036:CDS | 30.0% | |
| AATTCATTCATGTCATCCTT+AGG | + | chr3.2:66186910-66186929 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3.2:66189039-66189058 | None:intergenic | 30.0% | |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3.2:66188564-66188583 | None:intergenic | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3.2:66188232-66188251 | MS.gene29036:intron | 30.0% | |
| ATTATCACACCATTTGATTC+AGG | + | chr3.2:66186695-66186714 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3.2:66186975-66186994 | None:intergenic | 30.0% | |
| CATATAGACTATATTACCTG+TGG | + | chr3.2:66187520-66187539 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3.2:66186878-66186897 | None:intergenic | 30.0% | |
| GTAAAGAAACATATACGTAC+TGG | + | chr3.2:66188845-66188864 | None:intergenic | 30.0% | |
| GTAGGATGTTTCTTATTGTT+TGG | - | chr3.2:66187646-66187665 | MS.gene29036:CDS | 30.0% | |
| GTATGATATCCCTTTGATAT+TGG | - | chr3.2:66187297-66187316 | MS.gene29036:intron | 30.0% | |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3.2:66186873-66186892 | None:intergenic | 30.0% | |
| GTTGTTGAGTTTAACTATGA+TGG | - | chr3.2:66187391-66187410 | MS.gene29036:intron | 30.0% | |
| TATAAATGCCTTCTTCTTCT+TGG | + | chr3.2:66187174-66187193 | None:intergenic | 30.0% | |
| TCAACAACCCCTAAAAAATA+GGG | + | chr3.2:66187379-66187398 | None:intergenic | 30.0% | |
| TCAAGGATTACTAACTATAC+AGG | + | chr3.2:66187348-66187367 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3.2:66188858-66188877 | MS.gene29036:CDS | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3.2:66186874-66186893 | None:intergenic | 30.0% | |
| TTCCATTCAAAAATGATCCT+CGG | + | chr3.2:66188887-66188906 | None:intergenic | 30.0% | |
| TTTGTCTATGTGATGAATGA+TGG | - | chr3.2:66188928-66188947 | MS.gene29036:intron | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3.2:66186445-66186464 | None:intergenic | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3.2:66188800-66188819 | MS.gene29036:CDS | 30.0% |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3.2:66188283-66188302 | MS.gene29036:intron | 30.0% |
| ! | GGTTTGAAATCAAAATCATG+GGG | - | chr3.2:66186584-66186603 | MS.gene29036:intron | 30.0% |
| ! | TAATCAACCACATACCTTTT+TGG | + | chr3.2:66186777-66186796 | None:intergenic | 30.0% |
| ! | TTTTGTGTTGTGAGTGATTT+TGG | - | chr3.2:66186563-66186582 | MS.gene29036:intron | 30.0% |
| !! | AACATATACGTACTGGTTAA+TGG | + | chr3.2:66188838-66188857 | None:intergenic | 30.0% |
| !! | AAGAAGGCATTTATAGTGAT+AGG | - | chr3.2:66187179-66187198 | MS.gene29036:CDS | 30.0% |
| !! | ACGTTGTTTCTGCATTTATA+GGG | - | chr3.2:66188698-66188717 | MS.gene29036:intron | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3.2:66188455-66188474 | None:intergenic | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3.2:66188446-66188465 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3.2:66186474-66186493 | MS.gene29036:CDS | 30.0% |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3.2:66186879-66186898 | MS.gene29036:intron | 30.0% |
| !!! | TTTTTTTTGTAGCAGGATGT+GGG | - | chr3.2:66186664-66186683 | MS.gene29036:intron | 30.0% |
| !!! | TTTTTTTTTGTAGCAGGATG+TGG | - | chr3.2:66186663-66186682 | MS.gene29036:intron | 30.0% |
| AAAACAAGAAATGGGCAAGA+AGG | + | chr3.2:66186525-66186544 | None:intergenic | 35.0% | |
| AAACAAGAAATGGGCAAGAA+GGG | + | chr3.2:66186524-66186543 | None:intergenic | 35.0% | |
| AAAGTAAGTACACTGGATTC+TGG | - | chr3.2:66188575-66188594 | MS.gene29036:intron | 35.0% | |
| AAGTTGCACTGAAACAACAA+TGG | + | chr3.2:66188062-66188081 | None:intergenic | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3.2:66187463-66187482 | MS.gene29036:CDS | 35.0% | |
| ACACTGGATTCTGGATTATT+TGG | - | chr3.2:66188584-66188603 | MS.gene29036:intron | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3.2:66187906-66187925 | MS.gene29036:intron | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3.2:66187457-66187476 | MS.gene29036:CDS | 35.0% | |
| ATAAGCATTAAGCCACAATC+AGG | + | chr3.2:66188669-66188688 | None:intergenic | 35.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3.2:66186439-66186458 | MS.gene29036:CDS | 35.0% | |
| CTCAACAACCCCTAAAAAAT+AGG | + | chr3.2:66187380-66187399 | None:intergenic | 35.0% | |
| CTGGTTAATGGAAATGTAAG+TGG | + | chr3.2:66188826-66188845 | None:intergenic | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3.2:66187929-66187948 | MS.gene29036:intron | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3.2:66188340-66188359 | MS.gene29036:intron | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3.2:66189277-66189296 | None:intergenic | 35.0% | |
| GCAGATATATGCAATCTCTA+AGG | - | chr3.2:66188794-66188813 | MS.gene29036:CDS | 35.0% | |
| GGATACATAAAGATTCTTGC+TGG | + | chr3.2:66189084-66189103 | None:intergenic | 35.0% | |
| GTGATTCAGTTAGAGAAACT+TGG | - | chr3.2:66187234-66187253 | MS.gene29036:CDS | 35.0% | |
| GTTGTTCACCTGATCAAAAT+CGG | + | chr3.2:66187448-66187467 | None:intergenic | 35.0% | |
| TACATTGGGTGTATGAAATC+TGG | - | chr3.2:66188537-66188556 | MS.gene29036:intron | 35.0% | |
| TATCTCGAAAGTAAGTACAC+TGG | - | chr3.2:66188568-66188587 | MS.gene29036:intron | 35.0% | |
| TGAACAGATCATGTAGTGAT+TGG | + | chr3.2:66187996-66188015 | None:intergenic | 35.0% | |
| TGAAGGTGACCGAATAAATT+AGG | - | chr3.2:66187607-66187626 | MS.gene29036:intron | 35.0% | |
| TGCAGAAACAACGTCAAAAA+TGG | + | chr3.2:66188692-66188711 | None:intergenic | 35.0% | |
| TTCATAGTTCTCTGAGTTTG+AGG | + | chr3.2:66187894-66187913 | None:intergenic | 35.0% | |
| TTCTACTGCAGTTGGATTAT+GGG | - | chr3.2:66188291-66188310 | MS.gene29036:intron | 35.0% | |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3.2:66188955-66188974 | None:intergenic | 35.0% | |
| TTGTTCACCTGATCAAAATC+GGG | + | chr3.2:66187447-66187466 | None:intergenic | 35.0% | |
| TTTCTACTGCAGTTGGATTA+TGG | - | chr3.2:66188290-66188309 | MS.gene29036:intron | 35.0% | |
| ! | CATTGAAACTTGCTTGTCTA+AGG | + | chr3.2:66187069-66187088 | None:intergenic | 35.0% |
| !! | AACCGAGGATCATTTTTGAA+TGG | - | chr3.2:66188882-66188901 | MS.gene29036:CDS | 35.0% |
| !! | GACGTTGTTTCTGCATTTAT+AGG | - | chr3.2:66188697-66188716 | MS.gene29036:intron | 35.0% |
| !! | TCTTGCTGGTTCTATTATCA+AGG | + | chr3.2:66189070-66189089 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3.2:66188744-66188763 | MS.gene29036:CDS | 35.0% |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3.2:66188454-66188473 | None:intergenic | 35.0% |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3.2:66186864-66186883 | MS.gene29036:intron | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3.2:66188456-66188475 | None:intergenic | 35.0% |
| !!! | TTATTTTTGTCTGAACCCTC+CGG | + | chr3.2:66188628-66188647 | None:intergenic | 35.0% |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3.2:66189194-66189213 | MS.gene29036:intron | 40.0% | |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3.2:66188734-66188753 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3.2:66186739-66186758 | MS.gene29036:CDS | 40.0% | |
| AGAGATTGCATATATCTGCC+CGG | + | chr3.2:66188793-66188812 | None:intergenic | 40.0% | |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3.2:66188470-66188489 | None:intergenic | 40.0% | |
| CTGGATTCTGGATTATTTGG+AGG | - | chr3.2:66188587-66188606 | MS.gene29036:intron | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3.2:66189272-66189291 | None:intergenic | 40.0% | |
| GAATAATGATCTGCCTTACC+AGG | + | chr3.2:66188146-66188165 | None:intergenic | 40.0% | |
| GCAAGTTTCAATGCTGCAAA+TGG | - | chr3.2:66187076-66187095 | MS.gene29036:intron | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3.2:66189273-66189292 | None:intergenic | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3.2:66186760-66186779 | MS.gene29036:CDS | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3.2:66187204-66187223 | MS.gene29036:CDS | 40.0% | |
| TAAAGGGAGCCAAGTGATAT+TGG | + | chr3.2:66187941-66187960 | None:intergenic | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3.2:66189511-66189530 | MS.gene29036:CDS | 40.0% | |
| TCACTTGGTTCATGGTTCAT+TGG | - | chr3.2:66189202-66189221 | MS.gene29036:CDS | 40.0% | |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3.2:66188741-66188760 | None:intergenic | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3.2:66189274-66189293 | None:intergenic | 40.0% | |
| TGTTCACCTGATCAAAATCG+GGG | + | chr3.2:66187446-66187465 | None:intergenic | 40.0% | |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3.2:66186491-66186510 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3.2:66188476-66188495 | MS.gene29036:CDS | 40.0% | |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3.2:66188727-66188746 | MS.gene29036:CDS | 40.0% |
| ! | ATTGGCCTGCAATCATAATG+AGG | + | chr3.2:66189154-66189173 | None:intergenic | 40.0% |
| ! | GATGGTCCTGCAGATTTTAT+TGG | - | chr3.2:66188946-66188965 | MS.gene29036:intron | 40.0% |
| ! | GATGTGACCAAAAAGGTATG+TGG | - | chr3.2:66186767-66186786 | MS.gene29036:CDS | 40.0% |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3.2:66188735-66188754 | MS.gene29036:CDS | 40.0% |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3.2:66188453-66188472 | None:intergenic | 40.0% |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3.2:66187919-66187938 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3.2:66188743-66188762 | MS.gene29036:CDS | 40.0% |
| AAATACTTCCGACACGCAAC+CGG | - | chr3.2:66188771-66188790 | MS.gene29036:CDS | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3.2:66189398-66189417 | MS.gene29036:intron | 45.0% | |
| ACAGAAGCAGGAAAAGCCTA+AGG | - | chr3.2:66186891-66186910 | MS.gene29036:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3.2:66187245-66187264 | MS.gene29036:intron | 45.0% | |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3.2:66188426-66188445 | None:intergenic | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3.2:66187163-66187182 | MS.gene29036:CDS | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3.2:66188531-66188550 | None:intergenic | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3.2:66188523-66188542 | MS.gene29036:intron | 45.0% | |
| CGAAAAGAACTCAACTGGCT+CGG | - | chr3.2:66187124-66187143 | MS.gene29036:intron | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3.2:66188468-66188487 | MS.gene29036:CDS | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3.2:66187470-66187489 | MS.gene29036:CDS | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3.2:66189146-66189165 | MS.gene29036:intron | 45.0% | |
| GATCCTCGGTTGCCAAATTA+AGG | + | chr3.2:66188873-66188892 | None:intergenic | 45.0% | |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3.2:66186487-66186506 | None:intergenic | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3.2:66189187-66189206 | MS.gene29036:intron | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3.2:66188432-66188451 | None:intergenic | 45.0% | |
| GGAGTATAATGCGAAGCTGT+AGG | - | chr3.2:66187628-66187647 | MS.gene29036:CDS | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3.2:66189505-66189524 | MS.gene29036:CDS | 45.0% | |
| GTTCACCTGATCAAAATCGG+GGG | + | chr3.2:66187445-66187464 | None:intergenic | 45.0% | |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3.2:66188522-66188541 | MS.gene29036:intron | 45.0% | |
| TCTCGCGAAAAGAACTCAAC+TGG | - | chr3.2:66187119-66187138 | MS.gene29036:intron | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3.2:66186683-66186702 | MS.gene29036:intron | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3.2:66188662-66188681 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3.2:66186493-66186512 | MS.gene29036:CDS | 45.0% | |
| TTTGCGTTGCGTCGTTTGAT+TGG | - | chr3.2:66189440-66189459 | MS.gene29036:intron | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3.2:66188085-66188104 | None:intergenic | 45.0% |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3.2:66188867-66188886 | MS.gene29036:CDS | 45.0% |
| ! | TCAGATTCATGATTGGCCAC+AGG | - | chr3.2:66187501-66187520 | MS.gene29036:intron | 45.0% |
| !! | TTTGTCCCCCGATTTTGATC+AGG | - | chr3.2:66187437-66187456 | MS.gene29036:CDS | 45.0% |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3.2:66188508-66188527 | None:intergenic | 45.0% |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3.2:66188130-66188149 | MS.gene29036:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3.2:66188772-66188791 | MS.gene29036:CDS | 50.0% | |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3.2:66188125-66188144 | MS.gene29036:intron | 50.0% | |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3.2:66187150-66187169 | None:intergenic | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3.2:66189468-66189487 | MS.gene29036:CDS | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3.2:66188532-66188551 | None:intergenic | 50.0% | |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3.2:66188512-66188531 | MS.gene29036:intron | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3.2:66188654-66188673 | MS.gene29036:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3.2:66189521-66189540 | MS.gene29036:CDS | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3.2:66189451-66189470 | MS.gene29036:intron | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3.2:66189402-66189421 | MS.gene29036:intron | 50.0% | |
| ! | AACTTGCTTGTCTAAGGCCC+TGG | + | chr3.2:66187063-66187082 | None:intergenic | 50.0% |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3.2:66187159-66187178 | None:intergenic | 50.0% |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3.2:66187153-66187172 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3.2:66188515-66188534 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3.2:66188514-66188533 | None:intergenic | 50.0% |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3.2:66188509-66188528 | None:intergenic | 50.0% |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3.2:66188782-66188801 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3.2:66188511-66188530 | MS.gene29036:intron | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3.2:66189244-66189263 | MS.gene29036:CDS | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3.2:66189252-66189271 | None:intergenic | 55.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3.2:66187143-66187162 | MS.gene29036:CDS | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3.2:66188619-66188638 | None:intergenic | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3.2:66188140-66188159 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3.2:66189408-66189427 | MS.gene29036:intron | 55.0% |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3.2:66189256-66189275 | MS.gene29036:CDS | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3.2:66188610-66188629 | MS.gene29036:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3.2:66188618-66188637 | None:intergenic | 60.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3.2:66188606-66188625 | MS.gene29036:intron | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3.2:66188620-66188639 | None:intergenic | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3.2:66189412-66189431 | MS.gene29036:intron | 60.0% |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3.2:66188609-66188628 | MS.gene29036:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3.2:66188613-66188632 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 66186423 | 66189558 | 66186423 | ID=MS.gene29036 |
| chr3.2 | mRNA | 66186423 | 66189558 | 66186423 | ID=MS.gene29036.t1;Parent=MS.gene29036 |
| chr3.2 | exon | 66189467 | 66189558 | 66189467 | ID=MS.gene29036.t1.exon1;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66189467 | 66189558 | 66189467 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66189200 | 66189305 | 66189200 | ID=MS.gene29036.t1.exon2;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66189200 | 66189305 | 66189200 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66189028 | 66189086 | 66189028 | ID=MS.gene29036.t1.exon3;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66189028 | 66189086 | 66189028 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66188715 | 66188917 | 66188715 | ID=MS.gene29036.t1.exon4;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66188715 | 66188917 | 66188715 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66188459 | 66188522 | 66188459 | ID=MS.gene29036.t1.exon5;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66188459 | 66188522 | 66188459 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66187835 | 66187907 | 66187835 | ID=MS.gene29036.t1.exon6;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66187835 | 66187907 | 66187835 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66187620 | 66187740 | 66187620 | ID=MS.gene29036.t1.exon7;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66187620 | 66187740 | 66187620 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66187404 | 66187491 | 66187404 | ID=MS.gene29036.t1.exon8;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66187404 | 66187491 | 66187404 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66187137 | 66187262 | 66187137 | ID=MS.gene29036.t1.exon9;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66187137 | 66187262 | 66187137 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66186704 | 66186813 | 66186704 | ID=MS.gene29036.t1.exon10;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66186704 | 66186813 | 66186704 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| chr3.2 | exon | 66186423 | 66186571 | 66186423 | ID=MS.gene29036.t1.exon11;Parent=MS.gene29036.t1 |
| chr3.2 | CDS | 66186423 | 66186571 | 66186423 | ID=cds.MS.gene29036.t1;Parent=MS.gene29036.t1 |
| Gene Sequence |
| Protein sequence |
