Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29096.t1 | XP_003601132.1 | 94.2 | 396 | 23 | 0 | 1 | 396 | 1 | 396 | 2.50E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29096.t1 | Q6NQB7 | 70.2 | 406 | 96 | 10 | 1 | 395 | 1 | 392 | 6.5e-157 | 555.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29096.t1 | G7J459 | 94.2 | 396 | 23 | 0 | 1 | 396 | 1 | 396 | 1.8e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene29096 | 0.825549 | 4.41E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene29096 | 0.833606 | 4.84E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene29096 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene29096 | 0.826448 | 2.70E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene29096 | 0.852205 | 5.38E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene29096 | 0.819337 | 1.22E-52 | -1.69E-46 |
| MS.gene049413 | MS.gene29096 | 0.802175 | 6.36E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene29096 | 0.857646 | 1.42E-62 | -1.69E-46 |
| MS.gene049652 | MS.gene29096 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene29096 | 0.819867 | 9.27E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene29096 | 0.81094 | 8.98E-51 | -1.69E-46 |
| MS.gene049976 | MS.gene29096 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene29096 | 0.83681 | 7.52E-57 | -1.69E-46 |
| MS.gene04998 | MS.gene29096 | 0.805916 | 1.06E-49 | -1.69E-46 |
| MS.gene050238 | MS.gene29096 | 0.830219 | 3.32E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene29096 | 0.802631 | 5.12E-49 | -1.69E-46 |
| MS.gene050414 | MS.gene29096 | 0.821148 | 4.71E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene29096 | 0.833432 | 5.35E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene29096 | 0.830914 | 2.25E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene29096 | 0.840706 | 7.40E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene29096 | 0.828307 | 9.67E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene29096 | 0.813609 | 2.35E-51 | -1.69E-46 |
| MS.gene050961 | MS.gene29096 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene051121 | MS.gene29096 | 0.816018 | 6.86E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene29096 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene051234 | MS.gene29096 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene29096 | 0.856625 | 2.83E-62 | -1.69E-46 |
| MS.gene051332 | MS.gene29096 | 0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene051490 | MS.gene29096 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene051541 | MS.gene29096 | 0.802753 | 4.83E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene29096 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene29096 | 0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene29096 | 0.842439 | 2.58E-58 | -1.69E-46 |
| MS.gene051832 | MS.gene29096 | 0.823477 | 1.36E-53 | -1.69E-46 |
| MS.gene051848 | MS.gene29096 | -0.819134 | 1.36E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene29096 | 0.816765 | 4.67E-52 | -1.69E-46 |
| MS.gene05191 | MS.gene29096 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene051959 | MS.gene29096 | 0.83022 | 3.32E-55 | -1.69E-46 |
| MS.gene051960 | MS.gene29096 | 0.827016 | 1.97E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene29096 | 0.804217 | 2.40E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene29096 | 0.86955 | 2.85E-66 | -1.69E-46 |
| MS.gene052037 | MS.gene29096 | 0.816207 | 6.23E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene29096 | 0.84999 | 2.27E-60 | -1.69E-46 |
| MS.gene052239 | MS.gene29096 | -0.80436 | 2.24E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene29096 | 0.824531 | 7.67E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene29096 | 0.840569 | 8.04E-58 | -1.69E-46 |
| MS.gene052493 | MS.gene29096 | 0.86555 | 5.44E-65 | -1.69E-46 |
| MS.gene052533 | MS.gene29096 | 0.839657 | 1.39E-57 | -1.69E-46 |
| MS.gene052534 | MS.gene29096 | 0.814891 | 1.22E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene29096 | 0.830132 | 3.49E-55 | -1.69E-46 |
| MS.gene052681 | MS.gene29096 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene052685 | MS.gene29096 | 0.811841 | 5.72E-51 | -1.69E-46 |
| MS.gene052889 | MS.gene29096 | 0.805293 | 1.43E-49 | -1.69E-46 |
| MS.gene052932 | MS.gene29096 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene053094 | MS.gene29096 | 0.829038 | 6.44E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene29096 | 0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene053151 | MS.gene29096 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene29096 | 0.816884 | 4.39E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene29096 | 0.811981 | 5.33E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene29096 | 0.822365 | 2.46E-53 | -1.69E-46 |
| MS.gene05410 | MS.gene29096 | 0.811513 | 6.74E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene29096 | 0.828784 | 7.41E-55 | -1.69E-46 |
| MS.gene054222 | MS.gene29096 | 0.84329 | 1.54E-58 | -1.69E-46 |
| MS.gene05423 | MS.gene29096 | 0.82419 | 9.23E-54 | -1.69E-46 |
| MS.gene05428 | MS.gene29096 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene05439 | MS.gene29096 | 0.807824 | 4.19E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene29096 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene054489 | MS.gene29096 | 0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene05454 | MS.gene29096 | 0.842332 | 2.76E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene29096 | 0.856392 | 3.32E-62 | -1.69E-46 |
| MS.gene05458 | MS.gene29096 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene054641 | MS.gene29096 | 0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene29096 | 0.805016 | 1.64E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene29096 | 0.917168 | 7.37E-86 | -1.69E-46 |
| MS.gene054893 | MS.gene29096 | 0.913572 | 5.27E-84 | -1.69E-46 |
| MS.gene054957 | MS.gene29096 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene055141 | MS.gene29096 | 0.854557 | 1.14E-61 | -1.69E-46 |
| MS.gene055147 | MS.gene29096 | 0.818956 | 1.50E-52 | -1.69E-46 |
| MS.gene055148 | MS.gene29096 | 0.801581 | 8.42E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene29096 | 0.821019 | 5.04E-53 | -1.69E-46 |
| MS.gene055150 | MS.gene29096 | 0.809044 | 2.30E-50 | -1.69E-46 |
| MS.gene055226 | MS.gene29096 | 0.814826 | 1.26E-51 | -1.69E-46 |
| MS.gene055229 | MS.gene29096 | 0.825945 | 3.55E-54 | -1.69E-46 |
| MS.gene055231 | MS.gene29096 | 0.820386 | 7.05E-53 | -1.69E-46 |
| MS.gene055386 | MS.gene29096 | 0.830189 | 3.38E-55 | -1.69E-46 |
| MS.gene05539 | MS.gene29096 | 0.825175 | 5.41E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene29096 | 0.837092 | 6.37E-57 | -1.69E-46 |
| MS.gene05552 | MS.gene29096 | 0.819975 | 8.75E-53 | -1.69E-46 |
| MS.gene055724 | MS.gene29096 | 0.807063 | 6.07E-50 | -1.69E-46 |
| MS.gene055827 | MS.gene29096 | 0.809194 | 2.13E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene29096 | 0.835721 | 1.42E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene29096 | 0.824017 | 1.01E-53 | -1.69E-46 |
| MS.gene05624 | MS.gene29096 | 0.861153 | 1.25E-63 | -1.69E-46 |
| MS.gene056677 | MS.gene29096 | 0.870433 | 1.46E-66 | -1.69E-46 |
| MS.gene056699 | MS.gene29096 | 0.841234 | 5.38E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene29096 | 0.86444 | 1.21E-64 | -1.69E-46 |
| MS.gene05690 | MS.gene29096 | 0.830821 | 2.37E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene29096 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene29096 | 0.862152 | 6.20E-64 | -1.69E-46 |
| MS.gene057155 | MS.gene29096 | 0.807277 | 5.47E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene29096 | 0.811148 | 8.09E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene29096 | 0.815699 | 8.09E-52 | -1.69E-46 |
| MS.gene057622 | MS.gene29096 | 0.82064 | 6.16E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene29096 | 0.815211 | 1.04E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene29096 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene29096 | 0.803471 | 3.43E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene29096 | 0.867016 | 1.87E-65 | -1.69E-46 |
| MS.gene058159 | MS.gene29096 | 0.868244 | 7.54E-66 | -1.69E-46 |
| MS.gene058279 | MS.gene29096 | 0.837647 | 4.59E-57 | -1.69E-46 |
| MS.gene058289 | MS.gene29096 | 0.824706 | 6.98E-54 | -1.69E-46 |
| MS.gene058317 | MS.gene29096 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene29096 | 0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene058592 | MS.gene29096 | 0.826424 | 2.73E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene29096 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene05878 | MS.gene29096 | 0.82207 | 2.88E-53 | -1.69E-46 |
| MS.gene05897 | MS.gene29096 | 0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene29096 | 0.821889 | 3.18E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene29096 | 0.874486 | 6.51E-68 | -1.69E-46 |
| MS.gene059439 | MS.gene29096 | 0.808233 | 3.42E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene29096 | 0.86688 | 2.06E-65 | -1.69E-46 |
| MS.gene05956 | MS.gene29096 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene059686 | MS.gene29096 | 0.80149 | 8.79E-49 | -1.69E-46 |
| MS.gene059774 | MS.gene29096 | 0.881499 | 2.28E-70 | -1.69E-46 |
| MS.gene05985 | MS.gene29096 | -0.864841 | 9.09E-65 | -1.69E-46 |
| MS.gene059901 | MS.gene29096 | -0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene29096 | 0.824368 | 8.38E-54 | -1.69E-46 |
| MS.gene060012 | MS.gene29096 | 0.820686 | 6.02E-53 | -1.69E-46 |
| MS.gene06023 | MS.gene29096 | 0.802678 | 5.01E-49 | -1.69E-46 |
| MS.gene060257 | MS.gene29096 | 0.83311 | 6.44E-56 | -1.69E-46 |
| MS.gene060258 | MS.gene29096 | 0.803299 | 3.73E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene29096 | 0.846554 | 2.02E-59 | -1.69E-46 |
| MS.gene060365 | MS.gene29096 | 0.805465 | 1.32E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene29096 | 0.81585 | 7.48E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene29096 | 0.84189 | 3.61E-58 | -1.69E-46 |
| MS.gene060413 | MS.gene29096 | 0.835215 | 1.91E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene29096 | 0.810716 | 1.00E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene29096 | 0.83788 | 4.00E-57 | -1.69E-46 |
| MS.gene060522 | MS.gene29096 | 0.84544 | 4.06E-59 | -1.69E-46 |
| MS.gene06052 | MS.gene29096 | 0.806131 | 9.55E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene29096 | 0.878755 | 2.17E-69 | -1.69E-46 |
| MS.gene060716 | MS.gene29096 | 0.829579 | 4.76E-55 | -1.69E-46 |
| MS.gene060777 | MS.gene29096 | 0.824862 | 6.41E-54 | -1.69E-46 |
| MS.gene060785 | MS.gene29096 | 0.830743 | 2.47E-55 | -1.69E-46 |
| MS.gene060840 | MS.gene29096 | 0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene29096 | 0.848538 | 5.75E-60 | -1.69E-46 |
| MS.gene060933 | MS.gene29096 | 0.842924 | 1.92E-58 | -1.69E-46 |
| MS.gene060935 | MS.gene29096 | 0.820647 | 6.14E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene29096 | 0.84249 | 2.51E-58 | -1.69E-46 |
| MS.gene061047 | MS.gene29096 | 0.829383 | 5.31E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene29096 | 0.860853 | 1.55E-63 | -1.69E-46 |
| MS.gene061160 | MS.gene29096 | 0.839131 | 1.90E-57 | -1.69E-46 |
| MS.gene061188 | MS.gene29096 | 0.865651 | 5.06E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35642 | MS.gene29096 | PPI |
| MS.gene29096 | MS.gene29036 | PPI |
| MS.gene30750 | MS.gene29096 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29096.t1 | MTR_3g073370 | 99.242 | 396 | 3 | 0 | 1 | 396 | 1 | 396 | 0.0 | 822 |
| MS.gene29096.t1 | MTR_3g073370 | 98.990 | 396 | 3 | 1 | 1 | 396 | 1 | 395 | 0.0 | 816 |
| MS.gene29096.t1 | MTR_4g048320 | 63.291 | 395 | 136 | 4 | 9 | 396 | 15 | 407 | 0.0 | 524 |
| MS.gene29096.t1 | MTR_4g035490 | 62.016 | 387 | 131 | 5 | 10 | 393 | 7 | 380 | 0.0 | 514 |
| MS.gene29096.t1 | MTR_2g088270 | 62.148 | 391 | 142 | 4 | 9 | 396 | 15 | 402 | 0.0 | 509 |
| MS.gene29096.t1 | MTR_4g048320 | 66.667 | 348 | 109 | 2 | 52 | 396 | 6 | 349 | 1.50e-178 | 501 |
| MS.gene29096.t1 | MTR_4g013305 | 56.716 | 402 | 135 | 4 | 1 | 396 | 10 | 378 | 5.58e-165 | 468 |
| MS.gene29096.t1 | MTR_5g009700 | 41.389 | 360 | 167 | 8 | 19 | 374 | 23 | 342 | 4.57e-84 | 260 |
| MS.gene29096.t1 | MTR_3g090600 | 38.919 | 370 | 180 | 8 | 7 | 374 | 17 | 342 | 1.21e-81 | 254 |
| MS.gene29096.t1 | MTR_5g009700 | 46.953 | 279 | 124 | 4 | 97 | 374 | 1 | 256 | 1.83e-81 | 250 |
| MS.gene29096.t1 | MTR_3g090600 | 38.919 | 370 | 178 | 9 | 7 | 374 | 17 | 340 | 4.53e-80 | 249 |
| MS.gene29096.t1 | MTR_1g012800 | 38.671 | 331 | 179 | 5 | 16 | 345 | 29 | 336 | 5.31e-72 | 229 |
| MS.gene29096.t1 | MTR_3g090600 | 39.241 | 316 | 162 | 8 | 7 | 317 | 17 | 307 | 6.17e-66 | 212 |
| MS.gene29096.t1 | MTR_3g090600 | 39.241 | 316 | 160 | 9 | 7 | 317 | 17 | 305 | 2.77e-64 | 208 |
| MS.gene29096.t1 | MTR_8g463930 | 36.071 | 280 | 163 | 8 | 107 | 383 | 62 | 328 | 1.80e-50 | 173 |
| MS.gene29096.t1 | MTR_2g078030 | 34.752 | 282 | 167 | 7 | 103 | 381 | 53 | 320 | 2.61e-49 | 170 |
| MS.gene29096.t1 | MTR_2g078030 | 36.546 | 249 | 148 | 5 | 103 | 349 | 53 | 293 | 2.11e-47 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29096.t1 | AT1G77810 | 71.859 | 398 | 96 | 8 | 1 | 396 | 1 | 384 | 0.0 | 580 |
| MS.gene29096.t1 | AT1G77810 | 71.322 | 401 | 96 | 9 | 1 | 396 | 1 | 387 | 0.0 | 575 |
| MS.gene29096.t1 | AT1G05170 | 63.038 | 395 | 137 | 4 | 9 | 396 | 15 | 407 | 0.0 | 530 |
| MS.gene29096.t1 | AT1G22015 | 64.541 | 392 | 136 | 3 | 3 | 394 | 5 | 393 | 0.0 | 529 |
| MS.gene29096.t1 | AT1G32930 | 60.606 | 396 | 146 | 3 | 5 | 396 | 10 | 399 | 0.0 | 514 |
| MS.gene29096.t1 | AT1G33430 | 63.542 | 384 | 130 | 5 | 10 | 388 | 7 | 385 | 1.05e-179 | 505 |
| MS.gene29096.t1 | AT2G32430 | 61.772 | 395 | 143 | 3 | 9 | 396 | 16 | 409 | 6.33e-179 | 504 |
| MS.gene29096.t1 | AT1G33430 | 62.245 | 392 | 130 | 6 | 10 | 388 | 7 | 393 | 1.20e-176 | 498 |
| MS.gene29096.t1 | AT4G26940 | 61.990 | 392 | 142 | 5 | 9 | 396 | 19 | 407 | 3.46e-176 | 497 |
| MS.gene29096.t1 | AT1G11730 | 59.948 | 387 | 133 | 7 | 9 | 394 | 17 | 382 | 5.01e-163 | 462 |
| MS.gene29096.t1 | AT1G05170 | 60.983 | 346 | 126 | 4 | 9 | 347 | 15 | 358 | 1.98e-155 | 442 |
| MS.gene29096.t1 | AT1G33430 | 60.261 | 307 | 112 | 5 | 10 | 311 | 7 | 308 | 2.00e-125 | 364 |
| MS.gene29096.t1 | AT4G26940 | 55.472 | 265 | 112 | 4 | 9 | 269 | 19 | 281 | 1.62e-91 | 278 |
| MS.gene29096.t1 | AT5G53340 | 41.772 | 316 | 167 | 7 | 48 | 361 | 37 | 337 | 2.39e-80 | 250 |
| MS.gene29096.t1 | AT5G53340 | 42.953 | 298 | 160 | 5 | 48 | 343 | 37 | 326 | 2.50e-80 | 250 |
| MS.gene29096.t1 | AT2G25300 | 45.560 | 259 | 132 | 4 | 88 | 345 | 8 | 258 | 6.77e-73 | 229 |
| MS.gene29096.t1 | AT2G25300 | 40.240 | 333 | 169 | 9 | 16 | 345 | 31 | 336 | 2.59e-72 | 230 |
| MS.gene29096.t1 | AT4G32120 | 44.788 | 259 | 134 | 4 | 88 | 345 | 85 | 335 | 7.04e-71 | 226 |
| MS.gene29096.t1 | AT1G53290 | 35.273 | 275 | 161 | 7 | 112 | 383 | 71 | 331 | 5.20e-50 | 172 |
| MS.gene29096.t1 | AT3G14960 | 35.472 | 265 | 154 | 7 | 120 | 381 | 77 | 327 | 1.03e-48 | 169 |
| MS.gene29096.t1 | AT2G26100 | 36.502 | 263 | 148 | 8 | 123 | 381 | 106 | 353 | 4.64e-48 | 167 |
| MS.gene29096.t1 | AT2G26100 | 37.712 | 236 | 135 | 6 | 123 | 355 | 106 | 332 | 3.50e-45 | 159 |
Find 78 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCATATTTGTGTAAAAT+TGG | 0.192644 | 3.2:+66234697 | None:intergenic |
| TATAAATGCCTTCTTCTTCT+TGG | 0.218514 | 3.2:+66236695 | None:intergenic |
| TTTCTACTGCAGTTGGATTA+TGG | 0.220482 | 3.2:-66235576 | MS.gene29096:CDS |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3.2:+66237424 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3.2:-66235526 | MS.gene29096:intron |
| AACATATACGTACTGGTTAA+TGG | 0.250748 | 3.2:+66235031 | None:intergenic |
| TTCTACTGCAGTTGGATTAT+GGG | 0.266499 | 3.2:-66235575 | MS.gene29096:CDS |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3.2:+66237174 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.289300 | 3.2:-66237427 | MS.gene29096:CDS |
| CATTGAAACTTGCTTGTCTA+AGG | 0.304646 | 3.2:+66236800 | None:intergenic |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3.2:+66236716 | None:intergenic |
| TCACTTGGTTCATGGTTCAT+TGG | 0.354905 | 3.2:-66234664 | MS.gene29096:CDS |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3.2:-66235095 | MS.gene29096:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3.2:-66235139 | MS.gene29096:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3.2:-66234672 | MS.gene29096:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.370357 | 3.2:-66235066 | MS.gene29096:CDS |
| TTTGCGTTGCGTCGTTTGAT+TGG | 0.371994 | 3.2:-66234426 | MS.gene29096:CDS |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3.2:+66237378 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3.2:+66236710 | None:intergenic |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3.2:-66235329 | MS.gene29096:CDS |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3.2:-66235390 | MS.gene29096:intron |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3.2:-66235072 | MS.gene29096:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3.2:-66236409 | MS.gene29096:CDS |
| AATTCATTCATGTCATCCTT+AGG | 0.423227 | 3.2:+66236959 | None:intergenic |
| ATTGTTATCAGATTCATGAT+TGG | 0.426162 | 3.2:-66236372 | MS.gene29096:CDS |
| AAGAAGGCATTTATAGTGAT+AGG | 0.426783 | 3.2:-66236687 | MS.gene29096:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3.2:+66235135 | None:intergenic |
| GCAAGTTTCAATGCTGCAAA+TGG | 0.451916 | 3.2:-66236790 | MS.gene29096:CDS |
| ATCTTATAGCAACATGTTGA+AGG | 0.454177 | 3.2:-66235634 | MS.gene29096:intron |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3.2:-66236396 | MS.gene29096:CDS |
| TCTCGCGAAAAGAACTCAAC+TGG | 0.473406 | 3.2:-66236747 | MS.gene29096:CDS |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3.2:-66236403 | MS.gene29096:CDS |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3.2:-66234345 | MS.gene29096:CDS |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3.2:-66236662 | MS.gene29096:CDS |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3.2:+66235305 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3.2:+66235784 | None:intergenic |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3.2:-66234610 | MS.gene29096:intron |
| GTGATTCAGTTAGAGAAACT+TGG | 0.516772 | 3.2:-66236632 | MS.gene29096:CDS |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3.2:-66235343 | MS.gene29096:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3.2:+66235128 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3.2:-66236404 | MS.gene29096:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3.2:-66235355 | MS.gene29096:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3.2:-66234679 | MS.gene29096:CDS |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3.2:-66234355 | MS.gene29096:CDS |
| CTGGTTAATGGAAATGTAAG+TGG | 0.540832 | 3.2:+66235043 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3.2:+66236719 | None:intergenic |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3.2:-66235344 | MS.gene29096:CDS |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3.2:+66235337 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3.2:-66237106 | MS.gene29096:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3.2:+66235338 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3.2:-66235741 | MS.gene29096:intron |
| ACAGAAGCAGGAAAAGCCTA+AGG | 0.573076 | 3.2:-66236975 | MS.gene29096:intron |
| TCAGATTCATGATTGGCCAC+AGG | 0.573731 | 3.2:-66236365 | MS.gene29096:intron |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3.2:-66234415 | MS.gene29096:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3.2:-66236723 | MS.gene29096:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3.2:+66234597 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3.2:-66237183 | MS.gene29096:CDS |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3.2:+66235076 | None:intergenic |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3.2:-66234454 | MS.gene29096:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3.2:+66235729 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3.2:-66234398 | MS.gene29096:CDS |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3.2:-66235094 | MS.gene29096:CDS |
| TTGGCATGCTCATCACAACT+AGG | 0.601087 | 3.2:-66237373 | MS.gene29096:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3.2:+66234596 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3.2:-66235354 | MS.gene29096:CDS |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.605321 | 3.2:-66236703 | MS.gene29096:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3.2:-66236621 | MS.gene29096:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3.2:+66237382 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3.2:+66235087 | None:intergenic |
| CGAAAAGAACTCAACTGGCT+CGG | 0.614371 | 3.2:-66236742 | MS.gene29096:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3.2:-66234464 | MS.gene29096:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3.2:-66234458 | MS.gene29096:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3.2:-66234361 | MS.gene29096:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3.2:-66234367 | MS.gene29096:CDS |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3.2:-66234468 | MS.gene29096:intron |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3.2:-66234622 | MS.gene29096:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3.2:-66237127 | MS.gene29096:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3.2:+66234617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3.2:66237220-66237239 | None:intergenic | 10.0% |
| !!! | TAATTTGATTTTTAATTTCT+TGG | - | chr3.2:66234941-66234960 | MS.gene29096:intron | 10.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3.2:66237034-66237053 | MS.gene29096:intron | 15.0% |
| !! | TAAGAAAGAATATTATATGT+CGG | + | chr3.2:66237012-66237031 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGTAGC+AGG | - | chr3.2:66234564-66234583 | MS.gene29096:intron | 15.0% |
| !! | ATTGATGAAAAAACAAGAAA+TGG | + | chr3.2:66234441-66234460 | None:intergenic | 20.0% |
| !! | CATTATACTCCTAATTTATT+CGG | + | chr3.2:66235526-66235545 | None:intergenic | 20.0% |
| !! | TAATATAGTCTATATGATTC+TGG | - | chr3.2:66235431-66235450 | MS.gene29096:intron | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3.2:66236089-66236108 | MS.gene29096:intron | 20.0% |
| !! | TTGATGAAAAAACAAGAAAT+GGG | + | chr3.2:66234440-66234459 | None:intergenic | 20.0% |
| !! | TTTATATGGATTCTACTTAA+TGG | - | chr3.2:66235923-66235942 | MS.gene29096:intron | 20.0% |
| !! | TTTATTGTGTGAGAAAAATA+TGG | - | chr3.2:66236080-66236099 | MS.gene29096:intron | 20.0% |
| !!! | AGTTTTTATCCCTATTTTTT+AGG | - | chr3.2:66235274-66235293 | MS.gene29096:intron | 20.0% |
| !!! | ATCTTATTTAAGACTCAATT+TGG | - | chr3.2:66235182-66235201 | MS.gene29096:intron | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3.2:66235728-66235747 | MS.gene29096:intron | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3.2:66235618-66235637 | MS.gene29096:CDS | 20.0% |
| !!! | GTTTTTATCCCTATTTTTTA+GGG | - | chr3.2:66235275-66235294 | MS.gene29096:intron | 20.0% |
| !!! | TTTTTATCCCTATTTTTTAG+GGG | - | chr3.2:66235276-66235295 | MS.gene29096:intron | 20.0% |
| ! | AAAATAGGGATAAAAACTCA+AGG | + | chr3.2:66235272-66235291 | None:intergenic | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3.2:66234888-66234907 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3.2:66234375-66234394 | None:intergenic | 25.0% |
| ! | ACATGATCTGTTCATTTATA+TGG | - | chr3.2:66235909-66235928 | MS.gene29096:intron | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+AGG | + | chr3.2:66235865-66235884 | None:intergenic | 25.0% |
| ! | ATATTGGGATGAAAAATTTG+AGG | - | chr3.2:66235220-66235239 | MS.gene29096:intron | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3.2:66235401-66235420 | MS.gene29096:intron | 25.0% |
| ! | GAAAAACAAAGAACTGTAAA+GGG | + | chr3.2:66235864-66235883 | None:intergenic | 25.0% |
| ! | GAAACTACCAAAACAAAATT+TGG | - | chr3.2:66235468-66235487 | MS.gene29096:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3.2:66236316-66236335 | None:intergenic | 25.0% |
| ! | TATGATATCCCTTTGATATT+GGG | - | chr3.2:66235205-66235224 | MS.gene29096:intron | 25.0% |
| ! | TGAACTTTATGATCTGATTT+AGG | - | chr3.2:66234537-66234556 | MS.gene29096:intron | 25.0% |
| ! | TTAGGAGATAATAACAATGA+AGG | - | chr3.2:66235497-66235516 | MS.gene29096:intron | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+TGG | + | chr3.2:66237079-66237098 | None:intergenic | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3.2:66236264-66236283 | MS.gene29096:intron | 25.0% |
| !! | ATTTTTCATCCCAATATCAA+AGG | + | chr3.2:66235217-66235236 | None:intergenic | 25.0% |
| !! | TGGTTTGAAATCAAAATCAT+GGG | - | chr3.2:66234490-66234509 | MS.gene29096:intron | 25.0% |
| !! | TTGGTTTGAAATCAAAATCA+TGG | - | chr3.2:66234489-66234508 | MS.gene29096:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3.2:66235701-66235720 | None:intergenic | 25.0% |
| !! | TTTTTCATCCCAATATCAAA+GGG | + | chr3.2:66235216-66235235 | None:intergenic | 25.0% |
| !!! | AACAAAATTTGGTGTGATTT+AGG | - | chr3.2:66235479-66235498 | MS.gene29096:intron | 25.0% |
| !!! | AATAAGATAGTTTTACCTTG+AGG | + | chr3.2:66235170-66235189 | None:intergenic | 25.0% |
| !!! | AATCACACCAAATTTTGTTT+TGG | + | chr3.2:66235478-66235497 | None:intergenic | 25.0% |
| !!! | GGTCACTTGATTATTTTTAT+TGG | - | chr3.2:66235749-66235768 | MS.gene29096:CDS | 25.0% |
| !!! | GTGTGTTATTTTTGCTTTTT+TGG | - | chr3.2:66234745-66234764 | MS.gene29096:intron | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3.2:66236352-66236371 | None:intergenic | 25.0% |
| !!! | TTTGGCTTAATTTTGACATT+TGG | - | chr3.2:66236107-66236126 | MS.gene29096:intron | 25.0% |
| !!! | TTTTAATTTCTTGGATTCCA+GGG | - | chr3.2:66234950-66234969 | MS.gene29096:intron | 25.0% |
| !!! | TTTTTAATTTCTTGGATTCC+AGG | - | chr3.2:66234949-66234968 | MS.gene29096:intron | 25.0% |
| AAATATGTGCACTCAAAATG+TGG | - | chr3.2:66237406-66237425 | MS.gene29096:CDS | 30.0% | |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3.2:66235369-66235388 | MS.gene29096:CDS | 30.0% | |
| AATTCATTCATGTCATCCTT+AGG | + | chr3.2:66234817-66234836 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3.2:66236946-66236965 | None:intergenic | 30.0% | |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3.2:66236471-66236490 | None:intergenic | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3.2:66236139-66236158 | MS.gene29096:intron | 30.0% | |
| ATTATCACACCATTTGATTC+AGG | + | chr3.2:66234602-66234621 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3.2:66234882-66234901 | None:intergenic | 30.0% | |
| CATATAGACTATATTACCTG+TGG | + | chr3.2:66235427-66235446 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3.2:66234785-66234804 | None:intergenic | 30.0% | |
| GTAAAGAAACATATACGTAC+TGG | + | chr3.2:66236752-66236771 | None:intergenic | 30.0% | |
| GTAGGATGTTTCTTATTGTT+TGG | - | chr3.2:66235553-66235572 | MS.gene29096:CDS | 30.0% | |
| GTATGATATCCCTTTGATAT+TGG | - | chr3.2:66235204-66235223 | MS.gene29096:intron | 30.0% | |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3.2:66234780-66234799 | None:intergenic | 30.0% | |
| GTTGTTGAGTTTAACTATGA+TGG | - | chr3.2:66235298-66235317 | MS.gene29096:intron | 30.0% | |
| TATAAATGCCTTCTTCTTCT+TGG | + | chr3.2:66235081-66235100 | None:intergenic | 30.0% | |
| TCAACAACCCCTAAAAAATA+GGG | + | chr3.2:66235286-66235305 | None:intergenic | 30.0% | |
| TCAAGGATTACTAACTATAC+AGG | + | chr3.2:66235255-66235274 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3.2:66236765-66236784 | MS.gene29096:CDS | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3.2:66234781-66234800 | None:intergenic | 30.0% | |
| TTCCATTCAAAAATGATCCT+CGG | + | chr3.2:66236794-66236813 | None:intergenic | 30.0% | |
| TTTGTCTATGTGATGAATGA+TGG | - | chr3.2:66236835-66236854 | MS.gene29096:intron | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3.2:66234352-66234371 | None:intergenic | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3.2:66236707-66236726 | MS.gene29096:CDS | 30.0% |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3.2:66236190-66236209 | MS.gene29096:intron | 30.0% |
| ! | GGTTTGAAATCAAAATCATG+GGG | - | chr3.2:66234491-66234510 | MS.gene29096:intron | 30.0% |
| ! | TAATCAACCACATACCTTTT+TGG | + | chr3.2:66234684-66234703 | None:intergenic | 30.0% |
| ! | TTTTGTGTTGTGAGTGATTT+TGG | - | chr3.2:66234470-66234489 | MS.gene29096:intron | 30.0% |
| !! | AACATATACGTACTGGTTAA+TGG | + | chr3.2:66236745-66236764 | None:intergenic | 30.0% |
| !! | AAGAAGGCATTTATAGTGAT+AGG | - | chr3.2:66235086-66235105 | MS.gene29096:CDS | 30.0% |
| !! | ACGTTGTTTCTGCATTTATA+GGG | - | chr3.2:66236605-66236624 | MS.gene29096:intron | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3.2:66236362-66236381 | None:intergenic | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3.2:66236353-66236372 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3.2:66234381-66234400 | MS.gene29096:CDS | 30.0% |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3.2:66234786-66234805 | MS.gene29096:intron | 30.0% |
| !!! | TTTTTTTTGTAGCAGGATGT+GGG | - | chr3.2:66234571-66234590 | MS.gene29096:intron | 30.0% |
| !!! | TTTTTTTTTGTAGCAGGATG+TGG | - | chr3.2:66234570-66234589 | MS.gene29096:intron | 30.0% |
| AAAACAAGAAATGGGCAAGA+AGG | + | chr3.2:66234432-66234451 | None:intergenic | 35.0% | |
| AAACAAGAAATGGGCAAGAA+GGG | + | chr3.2:66234431-66234450 | None:intergenic | 35.0% | |
| AAAGTAAGTACACTGGATTC+TGG | - | chr3.2:66236482-66236501 | MS.gene29096:intron | 35.0% | |
| AAGTTGCACTGAAACAACAA+TGG | + | chr3.2:66235969-66235988 | None:intergenic | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3.2:66235370-66235389 | MS.gene29096:CDS | 35.0% | |
| ACACTGGATTCTGGATTATT+TGG | - | chr3.2:66236491-66236510 | MS.gene29096:intron | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3.2:66235813-66235832 | MS.gene29096:intron | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3.2:66235364-66235383 | MS.gene29096:CDS | 35.0% | |
| ATAAGCATTAAGCCACAATC+AGG | + | chr3.2:66236576-66236595 | None:intergenic | 35.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3.2:66234346-66234365 | MS.gene29096:CDS | 35.0% | |
| CTCAACAACCCCTAAAAAAT+AGG | + | chr3.2:66235287-66235306 | None:intergenic | 35.0% | |
| CTGGTTAATGGAAATGTAAG+TGG | + | chr3.2:66236733-66236752 | None:intergenic | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3.2:66235836-66235855 | MS.gene29096:intron | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3.2:66236247-66236266 | MS.gene29096:intron | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3.2:66237184-66237203 | None:intergenic | 35.0% | |
| GCAGATATATGCAATCTCTA+AGG | - | chr3.2:66236701-66236720 | MS.gene29096:CDS | 35.0% | |
| GGATACATAAAGATTCTTGC+TGG | + | chr3.2:66236991-66237010 | None:intergenic | 35.0% | |
| GTGATTCAGTTAGAGAAACT+TGG | - | chr3.2:66235141-66235160 | MS.gene29096:CDS | 35.0% | |
| GTTGTTCACCTGATCAAAAT+CGG | + | chr3.2:66235355-66235374 | None:intergenic | 35.0% | |
| TACATTGGGTGTATGAAATC+TGG | - | chr3.2:66236444-66236463 | MS.gene29096:intron | 35.0% | |
| TATCTCGAAAGTAAGTACAC+TGG | - | chr3.2:66236475-66236494 | MS.gene29096:intron | 35.0% | |
| TGAACAGATCATGTAGTGAT+TGG | + | chr3.2:66235903-66235922 | None:intergenic | 35.0% | |
| TGAAGGTGACCGAATAAATT+AGG | - | chr3.2:66235514-66235533 | MS.gene29096:intron | 35.0% | |
| TGCAGAAACAACGTCAAAAA+TGG | + | chr3.2:66236599-66236618 | None:intergenic | 35.0% | |
| TTCATAGTTCTCTGAGTTTG+AGG | + | chr3.2:66235801-66235820 | None:intergenic | 35.0% | |
| TTCTACTGCAGTTGGATTAT+GGG | - | chr3.2:66236198-66236217 | MS.gene29096:intron | 35.0% | |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3.2:66236862-66236881 | None:intergenic | 35.0% | |
| TTGTTCACCTGATCAAAATC+GGG | + | chr3.2:66235354-66235373 | None:intergenic | 35.0% | |
| TTTCTACTGCAGTTGGATTA+TGG | - | chr3.2:66236197-66236216 | MS.gene29096:intron | 35.0% | |
| ! | CATTGAAACTTGCTTGTCTA+AGG | + | chr3.2:66234976-66234995 | None:intergenic | 35.0% |
| !! | AACCGAGGATCATTTTTGAA+TGG | - | chr3.2:66236789-66236808 | MS.gene29096:CDS | 35.0% |
| !! | GACGTTGTTTCTGCATTTAT+AGG | - | chr3.2:66236604-66236623 | MS.gene29096:intron | 35.0% |
| !! | TCTTGCTGGTTCTATTATCA+AGG | + | chr3.2:66236977-66236996 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3.2:66236651-66236670 | MS.gene29096:CDS | 35.0% |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3.2:66236361-66236380 | None:intergenic | 35.0% |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3.2:66234771-66234790 | MS.gene29096:intron | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3.2:66236363-66236382 | None:intergenic | 35.0% |
| !!! | TTATTTTTGTCTGAACCCTC+CGG | + | chr3.2:66236535-66236554 | None:intergenic | 35.0% |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3.2:66237101-66237120 | MS.gene29096:intron | 40.0% | |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3.2:66236641-66236660 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3.2:66234646-66234665 | MS.gene29096:CDS | 40.0% | |
| AGAGATTGCATATATCTGCC+CGG | + | chr3.2:66236700-66236719 | None:intergenic | 40.0% | |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3.2:66236377-66236396 | None:intergenic | 40.0% | |
| CTGGATTCTGGATTATTTGG+AGG | - | chr3.2:66236494-66236513 | MS.gene29096:intron | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3.2:66237179-66237198 | None:intergenic | 40.0% | |
| GAATAATGATCTGCCTTACC+AGG | + | chr3.2:66236053-66236072 | None:intergenic | 40.0% | |
| GCAAGTTTCAATGCTGCAAA+TGG | - | chr3.2:66234983-66235002 | MS.gene29096:intron | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3.2:66237180-66237199 | None:intergenic | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3.2:66234667-66234686 | MS.gene29096:CDS | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3.2:66235111-66235130 | MS.gene29096:CDS | 40.0% | |
| TAAAGGGAGCCAAGTGATAT+TGG | + | chr3.2:66235848-66235867 | None:intergenic | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3.2:66237418-66237437 | MS.gene29096:CDS | 40.0% | |
| TCACTTGGTTCATGGTTCAT+TGG | - | chr3.2:66237109-66237128 | MS.gene29096:CDS | 40.0% | |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3.2:66236648-66236667 | None:intergenic | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3.2:66237181-66237200 | None:intergenic | 40.0% | |
| TGTTCACCTGATCAAAATCG+GGG | + | chr3.2:66235353-66235372 | None:intergenic | 40.0% | |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3.2:66234398-66234417 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3.2:66236383-66236402 | MS.gene29096:CDS | 40.0% | |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3.2:66236634-66236653 | MS.gene29096:CDS | 40.0% |
| ! | ATTGGCCTGCAATCATAATG+AGG | + | chr3.2:66237061-66237080 | None:intergenic | 40.0% |
| ! | GATGGTCCTGCAGATTTTAT+TGG | - | chr3.2:66236853-66236872 | MS.gene29096:intron | 40.0% |
| ! | GATGTGACCAAAAAGGTATG+TGG | - | chr3.2:66234674-66234693 | MS.gene29096:CDS | 40.0% |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3.2:66236642-66236661 | MS.gene29096:CDS | 40.0% |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3.2:66236360-66236379 | None:intergenic | 40.0% |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3.2:66235826-66235845 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3.2:66236650-66236669 | MS.gene29096:CDS | 40.0% |
| AAATACTTCCGACACGCAAC+CGG | - | chr3.2:66236678-66236697 | MS.gene29096:CDS | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3.2:66237305-66237324 | MS.gene29096:intron | 45.0% | |
| ACAGAAGCAGGAAAAGCCTA+AGG | - | chr3.2:66234798-66234817 | MS.gene29096:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3.2:66235152-66235171 | MS.gene29096:intron | 45.0% | |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3.2:66236333-66236352 | None:intergenic | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3.2:66235070-66235089 | MS.gene29096:CDS | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3.2:66236438-66236457 | None:intergenic | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3.2:66236430-66236449 | MS.gene29096:intron | 45.0% | |
| CGAAAAGAACTCAACTGGCT+CGG | - | chr3.2:66235031-66235050 | MS.gene29096:intron | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3.2:66236375-66236394 | MS.gene29096:CDS | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3.2:66235377-66235396 | MS.gene29096:CDS | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3.2:66237053-66237072 | MS.gene29096:intron | 45.0% | |
| GATCCTCGGTTGCCAAATTA+AGG | + | chr3.2:66236780-66236799 | None:intergenic | 45.0% | |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3.2:66234394-66234413 | None:intergenic | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3.2:66237094-66237113 | MS.gene29096:intron | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3.2:66236339-66236358 | None:intergenic | 45.0% | |
| GGAGTATAATGCGAAGCTGT+AGG | - | chr3.2:66235535-66235554 | MS.gene29096:CDS | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3.2:66237412-66237431 | MS.gene29096:CDS | 45.0% | |
| GTTCACCTGATCAAAATCGG+GGG | + | chr3.2:66235352-66235371 | None:intergenic | 45.0% | |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3.2:66236429-66236448 | MS.gene29096:intron | 45.0% | |
| TCTCGCGAAAAGAACTCAAC+TGG | - | chr3.2:66235026-66235045 | MS.gene29096:intron | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3.2:66234590-66234609 | MS.gene29096:intron | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3.2:66236569-66236588 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3.2:66234400-66234419 | MS.gene29096:CDS | 45.0% | |
| TTTGCGTTGCGTCGTTTGAT+TGG | - | chr3.2:66237347-66237366 | MS.gene29096:intron | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3.2:66235992-66236011 | None:intergenic | 45.0% |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3.2:66236774-66236793 | MS.gene29096:CDS | 45.0% |
| ! | TCAGATTCATGATTGGCCAC+AGG | - | chr3.2:66235408-66235427 | MS.gene29096:intron | 45.0% |
| !! | TTTGTCCCCCGATTTTGATC+AGG | - | chr3.2:66235344-66235363 | MS.gene29096:CDS | 45.0% |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3.2:66236415-66236434 | None:intergenic | 45.0% |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3.2:66236037-66236056 | MS.gene29096:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3.2:66236679-66236698 | MS.gene29096:CDS | 50.0% | |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3.2:66236032-66236051 | MS.gene29096:intron | 50.0% | |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3.2:66235057-66235076 | None:intergenic | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3.2:66237375-66237394 | MS.gene29096:CDS | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3.2:66236439-66236458 | None:intergenic | 50.0% | |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3.2:66236419-66236438 | MS.gene29096:intron | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3.2:66236561-66236580 | MS.gene29096:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3.2:66237428-66237447 | MS.gene29096:CDS | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3.2:66237358-66237377 | MS.gene29096:intron | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3.2:66237309-66237328 | MS.gene29096:intron | 50.0% | |
| ! | AACTTGCTTGTCTAAGGCCC+TGG | + | chr3.2:66234970-66234989 | None:intergenic | 50.0% |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3.2:66235066-66235085 | None:intergenic | 50.0% |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3.2:66235060-66235079 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3.2:66236422-66236441 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3.2:66236421-66236440 | None:intergenic | 50.0% |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3.2:66236416-66236435 | None:intergenic | 50.0% |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3.2:66236689-66236708 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3.2:66236418-66236437 | MS.gene29096:intron | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3.2:66237151-66237170 | MS.gene29096:CDS | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3.2:66237159-66237178 | None:intergenic | 55.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3.2:66235050-66235069 | MS.gene29096:CDS | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3.2:66236526-66236545 | None:intergenic | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3.2:66236047-66236066 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3.2:66237315-66237334 | MS.gene29096:intron | 55.0% |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3.2:66237163-66237182 | MS.gene29096:CDS | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3.2:66236517-66236536 | MS.gene29096:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3.2:66236525-66236544 | None:intergenic | 60.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3.2:66236513-66236532 | MS.gene29096:intron | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3.2:66236527-66236546 | None:intergenic | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3.2:66237319-66237338 | MS.gene29096:intron | 60.0% |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3.2:66236516-66236535 | MS.gene29096:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3.2:66236520-66236539 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 66234330 | 66237465 | 66234330 | ID=MS.gene29096 |
| chr3.2 | mRNA | 66234330 | 66237465 | 66234330 | ID=MS.gene29096.t1;Parent=MS.gene29096 |
| chr3.2 | exon | 66237374 | 66237465 | 66237374 | ID=MS.gene29096.t1.exon1;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66237374 | 66237465 | 66237374 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66237107 | 66237212 | 66237107 | ID=MS.gene29096.t1.exon2;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66237107 | 66237212 | 66237107 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66236935 | 66236993 | 66236935 | ID=MS.gene29096.t1.exon3;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66236935 | 66236993 | 66236935 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66236622 | 66236824 | 66236622 | ID=MS.gene29096.t1.exon4;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66236622 | 66236824 | 66236622 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66236366 | 66236429 | 66236366 | ID=MS.gene29096.t1.exon5;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66236366 | 66236429 | 66236366 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66235742 | 66235814 | 66235742 | ID=MS.gene29096.t1.exon6;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66235742 | 66235814 | 66235742 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66235527 | 66235647 | 66235527 | ID=MS.gene29096.t1.exon7;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66235527 | 66235647 | 66235527 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66235311 | 66235398 | 66235311 | ID=MS.gene29096.t1.exon8;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66235311 | 66235398 | 66235311 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66235044 | 66235169 | 66235044 | ID=MS.gene29096.t1.exon9;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66235044 | 66235169 | 66235044 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66234611 | 66234720 | 66234611 | ID=MS.gene29096.t1.exon10;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66234611 | 66234720 | 66234611 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| chr3.2 | exon | 66234330 | 66234478 | 66234330 | ID=MS.gene29096.t1.exon11;Parent=MS.gene29096.t1 |
| chr3.2 | CDS | 66234330 | 66234478 | 66234330 | ID=cds.MS.gene29096.t1;Parent=MS.gene29096.t1 |
| Gene Sequence |
| Protein sequence |
