Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30750.t1 | XP_003601133.1 | 94.4 | 395 | 22 | 0 | 1 | 395 | 1 | 395 | 2.50E-208 | 734.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30750.t1 | Q6NQB7 | 69.9 | 405 | 98 | 9 | 1 | 394 | 1 | 392 | 5.9e-158 | 558.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30750.t1 | G7J458 | 94.4 | 395 | 22 | 0 | 1 | 395 | 1 | 395 | 1.8e-208 | 734.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051959 | MS.gene30750 | 0.820935 | 5.27E-53 | -1.69E-46 |
| MS.gene051960 | MS.gene30750 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene30750 | 0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene30750 | 0.810045 | 1.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30750 | MS.gene29096 | PPI |
| MS.gene30750 | MS.gene35642 | PPI |
| MS.gene30750 | MS.gene29036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30750.t1 | MTR_3g073370 | 99.494 | 395 | 2 | 0 | 1 | 395 | 1 | 395 | 0.0 | 822 |
| MS.gene30750.t1 | MTR_3g073370 | 99.242 | 396 | 2 | 1 | 1 | 395 | 1 | 396 | 0.0 | 818 |
| MS.gene30750.t1 | MTR_4g048320 | 63.452 | 394 | 136 | 3 | 9 | 395 | 15 | 407 | 0.0 | 528 |
| MS.gene30750.t1 | MTR_4g035490 | 62.176 | 386 | 131 | 4 | 10 | 392 | 7 | 380 | 0.0 | 518 |
| MS.gene30750.t1 | MTR_2g088270 | 62.308 | 390 | 142 | 3 | 9 | 395 | 15 | 402 | 0.0 | 513 |
| MS.gene30750.t1 | MTR_4g048320 | 66.667 | 348 | 109 | 2 | 51 | 395 | 6 | 349 | 1.98e-178 | 500 |
| MS.gene30750.t1 | MTR_4g013305 | 57.107 | 401 | 134 | 3 | 1 | 395 | 10 | 378 | 2.02e-167 | 473 |
| MS.gene30750.t1 | MTR_5g009700 | 41.389 | 360 | 169 | 7 | 16 | 373 | 23 | 342 | 1.47e-85 | 264 |
| MS.gene30750.t1 | MTR_3g090600 | 39.024 | 369 | 180 | 8 | 7 | 373 | 17 | 342 | 3.15e-82 | 255 |
| MS.gene30750.t1 | MTR_5g009700 | 46.953 | 279 | 124 | 4 | 96 | 373 | 1 | 256 | 1.58e-81 | 250 |
| MS.gene30750.t1 | MTR_3g090600 | 39.024 | 369 | 178 | 9 | 7 | 373 | 17 | 340 | 1.28e-80 | 251 |
| MS.gene30750.t1 | MTR_1g012800 | 38.788 | 330 | 178 | 5 | 16 | 344 | 30 | 336 | 8.20e-73 | 231 |
| MS.gene30750.t1 | MTR_3g090600 | 39.365 | 315 | 162 | 8 | 7 | 316 | 17 | 307 | 2.74e-66 | 213 |
| MS.gene30750.t1 | MTR_3g090600 | 39.365 | 315 | 160 | 9 | 7 | 316 | 17 | 305 | 9.60e-65 | 209 |
| MS.gene30750.t1 | MTR_8g463930 | 36.071 | 280 | 163 | 8 | 106 | 382 | 62 | 328 | 1.65e-50 | 173 |
| MS.gene30750.t1 | MTR_2g078030 | 34.752 | 282 | 167 | 7 | 102 | 380 | 53 | 320 | 2.42e-49 | 170 |
| MS.gene30750.t1 | MTR_2g078030 | 36.546 | 249 | 148 | 5 | 102 | 348 | 53 | 293 | 2.17e-47 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30750.t1 | AT1G77810 | 71.537 | 397 | 98 | 7 | 1 | 395 | 1 | 384 | 0.0 | 584 |
| MS.gene30750.t1 | AT1G77810 | 71.000 | 400 | 98 | 8 | 1 | 395 | 1 | 387 | 0.0 | 578 |
| MS.gene30750.t1 | AT1G05170 | 63.198 | 394 | 137 | 3 | 9 | 395 | 15 | 407 | 0.0 | 534 |
| MS.gene30750.t1 | AT1G22015 | 64.541 | 392 | 135 | 4 | 3 | 393 | 5 | 393 | 0.0 | 528 |
| MS.gene30750.t1 | AT1G32930 | 61.364 | 396 | 142 | 3 | 5 | 395 | 10 | 399 | 0.0 | 520 |
| MS.gene30750.t1 | AT1G33430 | 62.245 | 392 | 136 | 5 | 1 | 387 | 1 | 385 | 0.0 | 508 |
| MS.gene30750.t1 | AT2G32430 | 61.929 | 394 | 143 | 2 | 9 | 395 | 16 | 409 | 1.40e-180 | 508 |
| MS.gene30750.t1 | AT4G26940 | 62.404 | 391 | 141 | 4 | 9 | 395 | 19 | 407 | 8.18e-178 | 501 |
| MS.gene30750.t1 | AT1G33430 | 61.000 | 400 | 136 | 6 | 1 | 387 | 1 | 393 | 1.28e-177 | 500 |
| MS.gene30750.t1 | AT1G11730 | 60.104 | 386 | 133 | 6 | 9 | 393 | 17 | 382 | 1.23e-164 | 467 |
| MS.gene30750.t1 | AT1G05170 | 61.159 | 345 | 126 | 3 | 9 | 346 | 15 | 358 | 3.78e-157 | 447 |
| MS.gene30750.t1 | AT1G33430 | 58.730 | 315 | 118 | 5 | 1 | 310 | 1 | 308 | 2.86e-126 | 366 |
| MS.gene30750.t1 | AT4G26940 | 56.061 | 264 | 111 | 3 | 9 | 268 | 19 | 281 | 3.03e-93 | 282 |
| MS.gene30750.t1 | AT5G53340 | 39.130 | 345 | 180 | 8 | 16 | 358 | 19 | 335 | 1.17e-80 | 251 |
| MS.gene30750.t1 | AT5G53340 | 39.818 | 329 | 175 | 6 | 16 | 342 | 19 | 326 | 1.29e-80 | 251 |
| MS.gene30750.t1 | AT2G25300 | 40.060 | 332 | 170 | 8 | 16 | 344 | 31 | 336 | 3.34e-73 | 232 |
| MS.gene30750.t1 | AT2G25300 | 45.560 | 259 | 132 | 4 | 87 | 344 | 8 | 258 | 6.71e-73 | 229 |
| MS.gene30750.t1 | AT4G32120 | 38.554 | 332 | 175 | 6 | 16 | 344 | 30 | 335 | 4.10e-72 | 229 |
| MS.gene30750.t1 | AT1G53290 | 35.273 | 275 | 161 | 7 | 111 | 382 | 71 | 331 | 5.02e-50 | 172 |
| MS.gene30750.t1 | AT3G14960 | 35.472 | 265 | 154 | 7 | 119 | 380 | 77 | 327 | 1.08e-48 | 168 |
| MS.gene30750.t1 | AT2G26100 | 36.502 | 263 | 148 | 8 | 122 | 380 | 106 | 353 | 4.34e-48 | 167 |
| MS.gene30750.t1 | AT2G26100 | 37.712 | 236 | 135 | 6 | 122 | 354 | 106 | 332 | 2.93e-45 | 160 |
Find 82 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCATATTTGTGTAAAAT+TGG | 0.192644 | 3.1:+60135400 | None:intergenic |
| TTTCTACTGCAGTTGGATTA+TGG | 0.220482 | 3.1:-60136279 | MS.gene30750:CDS |
| AATCCATTTAGCAGAGATTT+TGG | 0.243247 | 3.1:+60138133 | None:intergenic |
| GACGATGTTCATGTCAATTT+AGG | 0.248599 | 3.1:-60136229 | MS.gene30750:intron |
| AACATATACGTACTGGTTAA+TGG | 0.250748 | 3.1:+60135734 | None:intergenic |
| TATAAACGCCTTCTTCTTCT+TGG | 0.252799 | 3.1:+60137405 | None:intergenic |
| TTCTACTGCAGTTGGATTAT+GGG | 0.266499 | 3.1:-60136278 | MS.gene30750:CDS |
| ATTATCACACCATTTGATTC+AGG | 0.274906 | 3.1:+60137883 | None:intergenic |
| CTACCAAAATCTCTGCTAAA+TGG | 0.276262 | 3.1:-60138136 | MS.gene30750:CDS |
| GGAAGCACCTTCACTGGAAT+TGG | 0.335761 | 3.1:+60137426 | None:intergenic |
| TATGCGTTGCGTCGTTTGAT+TGG | 0.338393 | 3.1:-60135129 | MS.gene30750:CDS |
| TCACTTGGTTCATGGTTCAT+TGG | 0.354905 | 3.1:-60135367 | MS.gene30750:CDS |
| CAATTCATTCATGTCATCCT+TGG | 0.361349 | 3.1:+60137667 | None:intergenic |
| AAATACTTCCGACACGCAAC+CGG | 0.363576 | 3.1:-60135798 | MS.gene30750:CDS |
| AGTACCATGAACCTGAGTTT+TGG | 0.369686 | 3.1:-60135842 | MS.gene30750:CDS |
| AAGACGTTTCACTTGGTTCA+TGG | 0.370236 | 3.1:-60135375 | MS.gene30750:CDS |
| ATATGCAATCTCTAAGGATT+TGG | 0.370357 | 3.1:-60135769 | MS.gene30750:CDS |
| TTGTGATGAGCATGCCAATA+AGG | 0.386549 | 3.1:+60138087 | None:intergenic |
| CTTCTTGGAAGCACCTTCAC+TGG | 0.386928 | 3.1:+60137420 | None:intergenic |
| TACATTGGGTGTATGAAATC+TGG | 0.398028 | 3.1:-60136032 | MS.gene30750:CDS |
| TTTGTTGCTCTTAGGTGTCT+TGG | 0.401003 | 3.1:-60136093 | MS.gene30750:intron |
| GCAGATATATGCAATCTCTA+AGG | 0.418280 | 3.1:-60135775 | MS.gene30750:CDS |
| AGGTGAACAACTTCTTCAAT+TGG | 0.419854 | 3.1:-60137119 | MS.gene30750:CDS |
| GCAAGTTTCCATGTTGCAAA+TGG | 0.421353 | 3.1:-60137500 | MS.gene30750:CDS |
| ATTGTTATCAGATTCATGAT+TGG | 0.426162 | 3.1:-60137082 | MS.gene30750:CDS |
| AATTCATTCATGTCATCCTT+GGG | 0.428243 | 3.1:+60137668 | None:intergenic |
| AAGAAGGCGTTTATAGTGAT+AGG | 0.439791 | 3.1:-60137397 | MS.gene30750:CDS |
| ACTTCCAAAACTCAGGTTCA+TGG | 0.442847 | 3.1:+60135838 | None:intergenic |
| ATCTTATAGCAACATGTTGA+AGG | 0.454177 | 3.1:-60136337 | MS.gene30750:intron |
| CTTCAATTGGAACGGGAGAA+AGG | 0.459349 | 3.1:-60137106 | MS.gene30750:CDS |
| TCTCGCGAAAAGAACTCAAC+TGG | 0.473406 | 3.1:-60137457 | MS.gene30750:CDS |
| ACATGGAAACTTGCTTGTCT+AGG | 0.473506 | 3.1:+60137509 | None:intergenic |
| ACAACTTCTTCAATTGGAAC+GGG | 0.474792 | 3.1:-60137113 | MS.gene30750:CDS |
| GTGAAGGAGATGGAGCTGTT+TGG | 0.475424 | 3.1:-60135048 | MS.gene30750:CDS |
| TAAACACAGCTTTCAGTAGC+AGG | 0.475599 | 3.1:-60137372 | MS.gene30750:CDS |
| ACTTACTTTCGAGATAAAAC+AGG | 0.497626 | 3.1:+60136008 | None:intergenic |
| AGCACGATCTAGAATGCTGT+TGG | 0.503006 | 3.1:+60136487 | None:intergenic |
| ATGTGCTGTGGAACCCCTCC+AGG | 0.515746 | 3.1:-60135313 | MS.gene30750:intron |
| GTGATTCAGTTAGAGAAACT+TGG | 0.516772 | 3.1:-60137342 | MS.gene30750:CDS |
| CAAAACCCAGGGTCTACATT+GGG | 0.517449 | 3.1:-60136046 | MS.gene30750:CDS |
| TCTCCAAACTTCCAAAACTC+AGG | 0.522925 | 3.1:+60135831 | None:intergenic |
| CATGGAAACTTGCTTGTCTA+GGG | 0.524248 | 3.1:+60137510 | None:intergenic |
| AACAACTTCTTCAATTGGAA+CGG | 0.527310 | 3.1:-60137114 | MS.gene30750:CDS |
| CCCGTCATCGTTCAAAACCC+AGG | 0.528161 | 3.1:-60136058 | MS.gene30750:CDS |
| GCGAATGAAGACGTTTCACT+TGG | 0.528259 | 3.1:-60135382 | MS.gene30750:CDS |
| TCAAAATGTGGTGAAGGAGA+TGG | 0.536110 | 3.1:-60135058 | MS.gene30750:CDS |
| CTGGTTAATGGAAATGTAAG+TGG | 0.540832 | 3.1:+60135746 | None:intergenic |
| TGCTAATTCCATTTGCAACA+TGG | 0.541094 | 3.1:+60137492 | None:intergenic |
| AGCACCTTCACTGGAATTGG+TGG | 0.541646 | 3.1:+60137429 | None:intergenic |
| TCAAAACCCAGGGTCTACAT+TGG | 0.553999 | 3.1:-60136047 | MS.gene30750:CDS |
| CATACACCCAATGTAGACCC+TGG | 0.557481 | 3.1:+60136040 | None:intergenic |
| GGATTGTGATGTGACCAAAA+AGG | 0.561138 | 3.1:-60137815 | MS.gene30750:intron |
| ATACACCCAATGTAGACCCT+GGG | 0.565448 | 3.1:+60136041 | None:intergenic |
| ACACAAAGACTTCCTTCGCC+TGG | 0.566057 | 3.1:-60136444 | MS.gene30750:intron |
| TCAGATTCATGATTGGCCAC+AGG | 0.573731 | 3.1:-60137075 | MS.gene30750:intron |
| TCGTTTGATTGGAGCTGCAG+TGG | 0.574832 | 3.1:-60135118 | MS.gene30750:CDS |
| TCGGCCACCAATTCCAGTGA+AGG | 0.575721 | 3.1:-60137433 | MS.gene30750:CDS |
| CTTCAAGTATATACCTGGAG+GGG | 0.576115 | 3.1:+60135300 | None:intergenic |
| TGGGAGCAACCTGAATCAAA+TGG | 0.578936 | 3.1:-60137892 | MS.gene30750:CDS |
| AGAGATTGCATATATCTGCC+CGG | 0.580156 | 3.1:+60135779 | None:intergenic |
| TGTGAGTGGAAGGCACAGGC+AGG | 0.591576 | 3.1:-60135157 | MS.gene30750:CDS |
| TGATCTGCCTTACCAGGCGA+AGG | 0.594114 | 3.1:+60136432 | None:intergenic |
| CAGTGGAATCTGCAAGTCAG+TGG | 0.594378 | 3.1:-60135101 | MS.gene30750:CDS |
| AATACTTCCGACACGCAACC+GGG | 0.596160 | 3.1:-60135797 | MS.gene30750:CDS |
| AAATGGAATTAGCAGCAGCT+AGG | 0.599100 | 3.1:-60137483 | MS.gene30750:CDS |
| TTGGCATGCTCATCACAACT+AGG | 0.601087 | 3.1:-60138082 | MS.gene30750:intron |
| GCTTCAAGTATATACCTGGA+GGG | 0.604128 | 3.1:+60135299 | None:intergenic |
| CCGTCATCGTTCAAAACCCA+GGG | 0.605180 | 3.1:-60136057 | MS.gene30750:CDS |
| AGAGAAACTTGGATGCCTCA+AGG | 0.605462 | 3.1:-60137331 | MS.gene30750:intron |
| GATGAGCATGCCAATAAGGA+AGG | 0.608946 | 3.1:+60138091 | None:intergenic |
| ATATCTGCCCGGTTGCGTGT+CGG | 0.614366 | 3.1:+60135790 | None:intergenic |
| CGAAAAGAACTCAACTGGCT+CGG | 0.614371 | 3.1:-60137452 | MS.gene30750:CDS |
| AGGTGCTTCCAAGAAGAAGA+AGG | 0.624772 | 3.1:-60137413 | MS.gene30750:CDS |
| TTGTGCAGACTGTGAGTGGA+AGG | 0.630863 | 3.1:-60135167 | MS.gene30750:intron |
| AGACTGTGAGTGGAAGGCAC+AGG | 0.631807 | 3.1:-60135161 | MS.gene30750:CDS |
| GTGCACTCAAAATGTGGTGA+AGG | 0.632410 | 3.1:-60135064 | MS.gene30750:CDS |
| AAATATGTGCACTCAAAATG+TGG | 0.634913 | 3.1:-60135070 | MS.gene30750:CDS |
| AATGTTGTGCAGACTGTGAG+TGG | 0.643243 | 3.1:-60135171 | MS.gene30750:intron |
| ACAGAAGCAGGAAAAGCCCA+AGG | 0.655089 | 3.1:-60137684 | MS.gene30750:intron |
| GATGACCGCAGTATGTGCTG+TGG | 0.707092 | 3.1:-60135325 | MS.gene30750:CDS |
| AGAACTTCAAGTGATCTCTG+AGG | 0.721031 | 3.1:-60137836 | MS.gene30750:CDS |
| GGGTTCCACAGCACATACTG+CGG | 0.739920 | 3.1:+60135320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCATCTTTAAATTTTTT+AGG | + | chr3.1:60137929-60137948 | None:intergenic | 10.0% |
| !! | AAAAATTACAAATTTCATTG+AGG | - | chr3.1:60137743-60137762 | MS.gene30750:intron | 15.0% |
| !! | TAAGAAAGAATATTATATGT+CGG | + | chr3.1:60137721-60137740 | None:intergenic | 15.0% |
| !!! | TAATTTTGTGTTTAATTTCT+TGG | - | chr3.1:60135643-60135662 | MS.gene30750:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGTAGC+AGG | - | chr3.1:60135267-60135286 | MS.gene30750:intron | 15.0% |
| !! | ATTGATGAAAAAACAAGAAA+TGG | + | chr3.1:60135144-60135163 | None:intergenic | 20.0% |
| !! | CATTATACTCCTAATTTATT+CGG | + | chr3.1:60136228-60136247 | None:intergenic | 20.0% |
| !! | TAATATAGTCTATATGATTC+TGG | - | chr3.1:60136133-60136152 | MS.gene30750:intron | 20.0% |
| !! | TGAGAAAAATATGGATAATT+TGG | - | chr3.1:60136798-60136817 | MS.gene30750:intron | 20.0% |
| !! | TTGATGAAAAAACAAGAAAT+GGG | + | chr3.1:60135143-60135162 | None:intergenic | 20.0% |
| !! | TTTATTCTGTGAGAAAAATA+TGG | - | chr3.1:60136789-60136808 | MS.gene30750:intron | 20.0% |
| !!! | AGTTTTTATCCCTTTTTTTT+AGG | - | chr3.1:60135976-60135995 | MS.gene30750:intron | 20.0% |
| !!! | ATCTTATTTAAGACTCAATT+TGG | - | chr3.1:60135884-60135903 | MS.gene30750:intron | 20.0% |
| !!! | ATGTGTAAAACTAAGTATTT+TGG | - | chr3.1:60136430-60136449 | MS.gene30750:intron | 20.0% |
| !!! | CAAAAAATATGTTCTTGTTT+TGG | - | chr3.1:60136320-60136339 | MS.gene30750:CDS | 20.0% |
| !!! | GTTTTTATCCCTTTTTTTTA+GGG | - | chr3.1:60135977-60135996 | MS.gene30750:intron | 20.0% |
| !!! | TGGTTTGAAATAAAAATCAT+GGG | - | chr3.1:60135193-60135212 | MS.gene30750:intron | 20.0% |
| !!! | TTGGTTTGAAATAAAAATCA+TGG | - | chr3.1:60135192-60135211 | MS.gene30750:intron | 20.0% |
| !!! | TTGTTTTGTTTTTGCTTTTT+TGG | - | chr3.1:60135448-60135467 | MS.gene30750:intron | 20.0% |
| !!! | TTTATATGGGTTTTACTTAA+TGG | - | chr3.1:60136632-60136651 | MS.gene30750:intron | 20.0% |
| !!! | TTTTTATCCCTTTTTTTTAG+GGG | - | chr3.1:60135978-60135997 | MS.gene30750:intron | 20.0% |
| ! | AAAAAAGGGATAAAAACTCA+AGG | + | chr3.1:60135974-60135993 | None:intergenic | 25.0% |
| ! | AAGAAACAAATCTAGCTAAA+AGG | + | chr3.1:60135591-60135610 | None:intergenic | 25.0% |
| ! | AAGGAAAAAACAGAGAAAAT+TGG | + | chr3.1:60135078-60135097 | None:intergenic | 25.0% |
| ! | ACATGATCTGATCATTTATA+TGG | - | chr3.1:60136618-60136637 | MS.gene30750:intron | 25.0% |
| ! | AGAAAAACAAAGAACTGTAA+CGG | + | chr3.1:60136574-60136593 | None:intergenic | 25.0% |
| ! | ATATTGGGATGAAAAATTTG+AGG | - | chr3.1:60135922-60135941 | MS.gene30750:intron | 25.0% |
| ! | ATTGTTATCAGATTCATGAT+TGG | - | chr3.1:60136103-60136122 | MS.gene30750:intron | 25.0% |
| ! | CATGATCTGATCATTTATAT+GGG | - | chr3.1:60136619-60136638 | MS.gene30750:intron | 25.0% |
| ! | GAAACTACCAAAACAAAATT+TGG | - | chr3.1:60136170-60136189 | MS.gene30750:intron | 25.0% |
| ! | TAAAGGTTTAAAAGAAACGA+TGG | + | chr3.1:60137025-60137044 | None:intergenic | 25.0% |
| ! | TATGATATCCCTTTGATATT+GGG | - | chr3.1:60135907-60135926 | MS.gene30750:intron | 25.0% |
| ! | TTAGGAGATAATAACAATGA+AGG | - | chr3.1:60136199-60136218 | MS.gene30750:intron | 25.0% |
| ! | TTCGCATATTTGTGTAAAAT+TGG | + | chr3.1:60137788-60137807 | None:intergenic | 25.0% |
| ! | TTTAGGTATATATCTGTCTT+AGG | - | chr3.1:60136973-60136992 | MS.gene30750:intron | 25.0% |
| !! | ATTTTTCATCCCAATATCAA+AGG | + | chr3.1:60135919-60135938 | None:intergenic | 25.0% |
| !! | GGTTTGAAATAAAAATCATG+GGG | - | chr3.1:60135194-60135213 | MS.gene30750:intron | 25.0% |
| !! | TGAACTTTATGATCTGATTT+TGG | - | chr3.1:60135240-60135259 | MS.gene30750:intron | 25.0% |
| !! | TTTCAAAGTGACTTATGTTT+TGG | + | chr3.1:60136403-60136422 | None:intergenic | 25.0% |
| !! | TTTTTCATCCCAATATCAAA+GGG | + | chr3.1:60135918-60135937 | None:intergenic | 25.0% |
| !!! | AACAAAATTTGGTGTGATTT+AGG | - | chr3.1:60136181-60136200 | MS.gene30750:intron | 25.0% |
| !!! | AATAAGATAGTTTTACCTTG+AGG | + | chr3.1:60135872-60135891 | None:intergenic | 25.0% |
| !!! | AATCACACCAAATTTTGTTT+TGG | + | chr3.1:60136180-60136199 | None:intergenic | 25.0% |
| !!! | TTATTTTTTTGGGGGAAATA+GGG | + | chr3.1:60137061-60137080 | None:intergenic | 25.0% |
| !!! | TTTGGCTTAATTTTGACATT+TGG | - | chr3.1:60136816-60136835 | MS.gene30750:intron | 25.0% |
| AAATATGTGCACTCAAAATG+TGG | - | chr3.1:60138115-60138134 | MS.gene30750:CDS | 30.0% | |
| AACAACTTCTTCAATTGGAA+CGG | - | chr3.1:60136071-60136090 | MS.gene30750:CDS | 30.0% | |
| AATTCATTCATGTCATCCTT+GGG | + | chr3.1:60135520-60135539 | None:intergenic | 30.0% | |
| ACAAGCTGAGATTTCATATT+TGG | + | chr3.1:60137655-60137674 | None:intergenic | 30.0% | |
| ACTTACTTTCGAGATAAAAC+AGG | + | chr3.1:60137180-60137199 | None:intergenic | 30.0% | |
| ATAAACATTAAGCCACAATC+AGG | + | chr3.1:60137285-60137304 | None:intergenic | 30.0% | |
| ATCTTATAGCAACATGTTGA+AGG | - | chr3.1:60136848-60136867 | MS.gene30750:intron | 30.0% | |
| ATTATCACACCATTTGATTC+AGG | + | chr3.1:60135305-60135324 | None:intergenic | 30.0% | |
| CAAATCTAGCTAAAAGGAAA+TGG | + | chr3.1:60135585-60135604 | None:intergenic | 30.0% | |
| CATATAGACTATATTACCTG+TGG | + | chr3.1:60136129-60136148 | None:intergenic | 30.0% | |
| CTTCTGTTATTCCAAAAAAG+TGG | + | chr3.1:60135488-60135507 | None:intergenic | 30.0% | |
| GAAAAACAAAGAACTGTAAC+GGG | + | chr3.1:60136573-60136592 | None:intergenic | 30.0% | |
| GTAAAGAAACATATACGTAC+TGG | + | chr3.1:60137461-60137480 | None:intergenic | 30.0% | |
| GTAGGATGTTTCTTATTGTT+TGG | - | chr3.1:60136255-60136274 | MS.gene30750:CDS | 30.0% | |
| GTATGATATCCCTTTGATAT+TGG | - | chr3.1:60135906-60135925 | MS.gene30750:intron | 30.0% | |
| GTTATTCCAAAAAAGTGGTA+GGG | + | chr3.1:60135483-60135502 | None:intergenic | 30.0% | |
| GTTGTTGAGTTTAACTATGA+TGG | - | chr3.1:60136000-60136019 | MS.gene30750:intron | 30.0% | |
| TCAACAACCCCTAAAAAAAA+GGG | + | chr3.1:60135988-60136007 | None:intergenic | 30.0% | |
| TCAAGGATTACTAACTATAC+AGG | + | chr3.1:60135957-60135976 | None:intergenic | 30.0% | |
| TCTTTACACAGTCCTTAATT+TGG | - | chr3.1:60137474-60137493 | MS.gene30750:CDS | 30.0% | |
| TGATCAGATCATGTAGTAAT+TGG | + | chr3.1:60136612-60136631 | None:intergenic | 30.0% | |
| TGTTATTCCAAAAAAGTGGT+AGG | + | chr3.1:60135484-60135503 | None:intergenic | 30.0% | |
| TTCCATTCAAAAATGATCCT+CGG | + | chr3.1:60137503-60137522 | None:intergenic | 30.0% | |
| ! | AATCCATTTAGCAGAGATTT+TGG | + | chr3.1:60135055-60135074 | None:intergenic | 30.0% |
| ! | ATATGCAATCTCTAAGGATT+TGG | - | chr3.1:60137416-60137435 | MS.gene30750:CDS | 30.0% |
| ! | ATTTTCTTTTCTACTGCAGT+TGG | - | chr3.1:60136899-60136918 | MS.gene30750:intron | 30.0% |
| ! | GTTTAATTTCTTGGATGCTA+GGG | - | chr3.1:60135652-60135671 | MS.gene30750:intron | 30.0% |
| ! | TAATCAACCACATACCTTTT+TGG | + | chr3.1:60135387-60135406 | None:intergenic | 30.0% |
| ! | TGTTTAATTTCTTGGATGCT+AGG | - | chr3.1:60135651-60135670 | MS.gene30750:intron | 30.0% |
| ! | TTCATAGTTCTTTGAGTTTG+AGG | + | chr3.1:60136503-60136522 | None:intergenic | 30.0% |
| ! | TTTTGTGTTGTGAGTGATTT+TGG | - | chr3.1:60135173-60135192 | MS.gene30750:intron | 30.0% |
| !! | AACATATACGTACTGGTTAA+TGG | + | chr3.1:60137454-60137473 | None:intergenic | 30.0% |
| !! | ACGTTGTTTCTGCATTTATA+GGG | - | chr3.1:60137314-60137333 | MS.gene30750:intron | 30.0% |
| !!! | AAGAGCGGAGTTATTTTTTT+GGG | + | chr3.1:60137071-60137090 | None:intergenic | 30.0% |
| !!! | GTTATTTTTTTGGGGGAAAT+AGG | + | chr3.1:60137062-60137081 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTCCTTCCTTAT+TGG | - | chr3.1:60135084-60135103 | MS.gene30750:CDS | 30.0% |
| !!! | TTTTTTGGAATAACAGAAGC+AGG | - | chr3.1:60135489-60135508 | MS.gene30750:intron | 30.0% |
| !!! | TTTTTTTTGTAGCAGGATGT+GGG | - | chr3.1:60135274-60135293 | MS.gene30750:intron | 30.0% |
| !!! | TTTTTTTTTGTAGCAGGATG+TGG | - | chr3.1:60135273-60135292 | MS.gene30750:intron | 30.0% |
| AAAGTAAGTACACTGGATTC+TGG | - | chr3.1:60137191-60137210 | MS.gene30750:intron | 35.0% | |
| AAGTTGCACTGAAACAACAA+TGG | + | chr3.1:60136678-60136697 | None:intergenic | 35.0% | |
| ACAACTTCTTCAATTGGAAC+GGG | - | chr3.1:60136072-60136091 | MS.gene30750:CDS | 35.0% | |
| ACACTGGATTCTGGATTATT+TGG | - | chr3.1:60137200-60137219 | MS.gene30750:intron | 35.0% | |
| ACTATGAATGCCTGCAAAAA+TGG | - | chr3.1:60136515-60136534 | MS.gene30750:intron | 35.0% | |
| AGGTGAACAACTTCTTCAAT+TGG | - | chr3.1:60136066-60136085 | MS.gene30750:CDS | 35.0% | |
| CAATTCATTCATGTCATCCT+TGG | + | chr3.1:60135521-60135540 | None:intergenic | 35.0% | |
| CTACCAAAATCTCTGCTAAA+TGG | - | chr3.1:60135049-60135068 | MS.gene30750:CDS | 35.0% | |
| CTCAACAACCCCTAAAAAAA+AGG | + | chr3.1:60135989-60136008 | None:intergenic | 35.0% | |
| CTGGTTAATGGAAATGTAAG+TGG | + | chr3.1:60137442-60137461 | None:intergenic | 35.0% | |
| CTTGTATGACCAATATCACT+TGG | - | chr3.1:60136538-60136557 | MS.gene30750:intron | 35.0% | |
| GACGATGTTCATGTCAATTT+AGG | - | chr3.1:60136956-60136975 | MS.gene30750:intron | 35.0% | |
| GATTGCTTCAAGTATATACC+TGG | + | chr3.1:60137893-60137912 | None:intergenic | 35.0% | |
| GCAGATATATGCAATCTCTA+AGG | - | chr3.1:60137410-60137429 | MS.gene30750:CDS | 35.0% | |
| GGATACATAAAGATTCTTGC+TGG | + | chr3.1:60137700-60137719 | None:intergenic | 35.0% | |
| GTGATTCAGTTAGAGAAACT+TGG | - | chr3.1:60135843-60135862 | MS.gene30750:CDS | 35.0% | |
| GTTGTTCACCTGATCAAAAT+CGG | + | chr3.1:60136057-60136076 | None:intergenic | 35.0% | |
| TACATTGGGTGTATGAAATC+TGG | - | chr3.1:60137153-60137172 | MS.gene30750:intron | 35.0% | |
| TATAAACGCCTTCTTCTTCT+TGG | + | chr3.1:60135783-60135802 | None:intergenic | 35.0% | |
| TATCTCGAAAGTAAGTACAC+TGG | - | chr3.1:60137184-60137203 | MS.gene30750:intron | 35.0% | |
| TGAAGGTGACCGAATAAATT+AGG | - | chr3.1:60136216-60136235 | MS.gene30750:intron | 35.0% | |
| TGCAGAAACAACGTCAAAAA+TGG | + | chr3.1:60137308-60137327 | None:intergenic | 35.0% | |
| TGCTAATTCCATTTGCAACA+TGG | + | chr3.1:60135696-60135715 | None:intergenic | 35.0% | |
| TTCTACTGCAGTTGGATTAT+GGG | - | chr3.1:60136907-60136926 | MS.gene30750:intron | 35.0% | |
| TTGCTTCCAATAAAATCTGC+AGG | + | chr3.1:60137571-60137590 | None:intergenic | 35.0% | |
| TTGTTCACCTGATCAAAATC+GGG | + | chr3.1:60136056-60136075 | None:intergenic | 35.0% | |
| TTTCTACTGCAGTTGGATTA+TGG | - | chr3.1:60136906-60136925 | MS.gene30750:intron | 35.0% | |
| ! | GATAGTCCTGCAGATTTTAT+TGG | - | chr3.1:60137562-60137581 | MS.gene30750:intron | 35.0% |
| !! | AACCGAGGATCATTTTTGAA+TGG | - | chr3.1:60137498-60137517 | MS.gene30750:CDS | 35.0% |
| !! | AAGAAGGCGTTTATAGTGAT+AGG | - | chr3.1:60135788-60135807 | MS.gene30750:CDS | 35.0% |
| !! | GACGTTGTTTCTGCATTTAT+AGG | - | chr3.1:60137313-60137332 | MS.gene30750:intron | 35.0% |
| !! | TCTTGCTGGTTCTATTATCA+AGG | + | chr3.1:60137686-60137705 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTTTGGAGAAGA+GGG | - | chr3.1:60137360-60137379 | MS.gene30750:CDS | 35.0% |
| !!! | AGAGCGGAGTTATTTTTTTG+GGG | + | chr3.1:60137070-60137089 | None:intergenic | 35.0% |
| !!! | AGTAAACCCTACCACTTTTT+TGG | - | chr3.1:60135474-60135493 | MS.gene30750:intron | 35.0% |
| !!! | GAAGAGCGGAGTTATTTTTT+TGG | + | chr3.1:60137072-60137091 | None:intergenic | 35.0% |
| !!! | TTATTTTTGTCTGAACCCTC+CGG | + | chr3.1:60137244-60137263 | None:intergenic | 35.0% |
| AAAACAAGAAATGGGCGAGA+AGG | + | chr3.1:60135135-60135154 | None:intergenic | 40.0% | |
| AAACAAGAAATGGGCGAGAA+GGG | + | chr3.1:60135134-60135153 | None:intergenic | 40.0% | |
| AAATGGAATTAGCAGCAGCT+AGG | - | chr3.1:60135702-60135721 | MS.gene30750:intron | 40.0% | |
| AAGACGTTTCACTTGGTTCA+TGG | - | chr3.1:60137810-60137829 | MS.gene30750:intron | 40.0% | |
| ACTTCCAAAACTCAGGTTCA+TGG | + | chr3.1:60137350-60137369 | None:intergenic | 40.0% | |
| AGAACTTCAAGTGATCTCTG+AGG | - | chr3.1:60135349-60135368 | MS.gene30750:CDS | 40.0% | |
| AGAGATTGCATATATCTGCC+CGG | + | chr3.1:60137409-60137428 | None:intergenic | 40.0% | |
| CTAAGAGCAACAAAGAAGAG+CGG | + | chr3.1:60137086-60137105 | None:intergenic | 40.0% | |
| CTGGATTCTGGATTATTTGG+AGG | - | chr3.1:60137203-60137222 | MS.gene30750:intron | 40.0% | |
| CTTCAAGTATATACCTGGAG+GGG | + | chr3.1:60137888-60137907 | None:intergenic | 40.0% | |
| GAATAATGATCTGCCTTACC+AGG | + | chr3.1:60136762-60136781 | None:intergenic | 40.0% | |
| GCAAGTTTCCATGTTGCAAA+TGG | - | chr3.1:60135685-60135704 | MS.gene30750:intron | 40.0% | |
| GCTTCAAGTATATACCTGGA+GGG | + | chr3.1:60137889-60137908 | None:intergenic | 40.0% | |
| GGATTGTGATGTGACCAAAA+AGG | - | chr3.1:60135370-60135389 | MS.gene30750:CDS | 40.0% | |
| TAAACACAGCTTTCAGTAGC+AGG | - | chr3.1:60135813-60135832 | MS.gene30750:CDS | 40.0% | |
| TCAAAATGTGGTGAAGGAGA+TGG | - | chr3.1:60138127-60138146 | MS.gene30750:CDS | 40.0% | |
| TCACTTGGTTCATGGTTCAT+TGG | - | chr3.1:60137818-60137837 | MS.gene30750:CDS | 40.0% | |
| TCTCCAAACTTCCAAAACTC+AGG | + | chr3.1:60137357-60137376 | None:intergenic | 40.0% | |
| TGCTTCAAGTATATACCTGG+AGG | + | chr3.1:60137890-60137909 | None:intergenic | 40.0% | |
| TGTTCACCTGATCAAAATCG+GGG | + | chr3.1:60136055-60136074 | None:intergenic | 40.0% | |
| TTGTGATGAGCATGCCAATA+AGG | + | chr3.1:60135101-60135120 | None:intergenic | 40.0% | |
| TTTGTTGCTCTTAGGTGTCT+TGG | - | chr3.1:60137092-60137111 | MS.gene30750:CDS | 40.0% | |
| ! | ACATGGAAACTTGCTTGTCT+AGG | + | chr3.1:60135679-60135698 | None:intergenic | 40.0% |
| ! | AGTACCATGAACCTGAGTTT+TGG | - | chr3.1:60137343-60137362 | MS.gene30750:CDS | 40.0% |
| ! | ATTGGCCTGCAATCATAATG+AGG | + | chr3.1:60137770-60137789 | None:intergenic | 40.0% |
| ! | CATGGAAACTTGCTTGTCTA+GGG | + | chr3.1:60135678-60135697 | None:intergenic | 40.0% |
| ! | GATGTGACCAAAAAGGTATG+TGG | - | chr3.1:60135377-60135396 | MS.gene30750:CDS | 40.0% |
| !!! | GAACCTGAGTTTTGGAAGTT+TGG | - | chr3.1:60137351-60137370 | MS.gene30750:CDS | 40.0% |
| !!! | GAGCGGAGTTATTTTTTTGG+GGG | + | chr3.1:60137069-60137088 | None:intergenic | 40.0% |
| !!! | GTCATACAAGCCATTTTTGC+AGG | + | chr3.1:60136528-60136547 | None:intergenic | 40.0% |
| !!! | GTTTTGGAAGTTTGGAGAAG+AGG | - | chr3.1:60137359-60137378 | MS.gene30750:CDS | 40.0% |
| AAATACTTCCGACACGCAAC+CGG | - | chr3.1:60137387-60137406 | MS.gene30750:CDS | 45.0% | |
| AATGTTGTGCAGACTGTGAG+TGG | - | chr3.1:60138014-60138033 | MS.gene30750:intron | 45.0% | |
| AGAGAAACTTGGATGCCTCA+AGG | - | chr3.1:60135854-60135873 | MS.gene30750:intron | 45.0% | |
| AGCCAACTGCCAAGTGATAT+TGG | + | chr3.1:60136550-60136569 | None:intergenic | 45.0% | |
| AGGGCAGAGATAAGTGGTAA+AGG | + | chr3.1:60137042-60137061 | None:intergenic | 45.0% | |
| AGGTGCTTCCAAGAAGAAGA+AGG | - | chr3.1:60135772-60135791 | MS.gene30750:CDS | 45.0% | |
| ATACACCCAATGTAGACCCT+GGG | + | chr3.1:60137147-60137166 | None:intergenic | 45.0% | |
| CAAAACCCAGGGTCTACATT+GGG | - | chr3.1:60137139-60137158 | MS.gene30750:intron | 45.0% | |
| CGAAAAGAACTCAACTGGCT+CGG | - | chr3.1:60135733-60135752 | MS.gene30750:intron | 45.0% | |
| CGCTCTTCTTTGTTGCTCTT+AGG | - | chr3.1:60137084-60137103 | MS.gene30750:CDS | 45.0% | |
| CTTCAATTGGAACGGGAGAA+AGG | - | chr3.1:60136079-60136098 | MS.gene30750:CDS | 45.0% | |
| GACCAATATCACTTGGCAGT+TGG | - | chr3.1:60136545-60136564 | MS.gene30750:intron | 45.0% | |
| GAGGTCCTCATTATGATTGC+AGG | - | chr3.1:60137762-60137781 | MS.gene30750:intron | 45.0% | |
| GATCCTCGGTTGCCAAATTA+AGG | + | chr3.1:60137489-60137508 | None:intergenic | 45.0% | |
| GATGAGCATGCCAATAAGGA+AGG | + | chr3.1:60135097-60135116 | None:intergenic | 45.0% | |
| GCGAATGAAGACGTTTCACT+TGG | - | chr3.1:60137803-60137822 | MS.gene30750:intron | 45.0% | |
| GGAAATAGGGCAGAGATAAG+TGG | + | chr3.1:60137048-60137067 | None:intergenic | 45.0% | |
| GGAGTATAATGCGAAGCTGT+AGG | - | chr3.1:60136237-60136256 | MS.gene30750:CDS | 45.0% | |
| GTGCACTCAAAATGTGGTGA+AGG | - | chr3.1:60138121-60138140 | MS.gene30750:CDS | 45.0% | |
| GTTCACCTGATCAAAATCGG+GGG | + | chr3.1:60136054-60136073 | None:intergenic | 45.0% | |
| TATGCGTTGCGTCGTTTGAT+TGG | - | chr3.1:60138056-60138075 | MS.gene30750:intron | 45.0% | |
| TCAAAACCCAGGGTCTACAT+TGG | - | chr3.1:60137138-60137157 | MS.gene30750:intron | 45.0% | |
| TCTCGCGAAAAGAACTCAAC+TGG | - | chr3.1:60135728-60135747 | MS.gene30750:intron | 45.0% | |
| TGGGAGCAACCTGAATCAAA+TGG | - | chr3.1:60135293-60135312 | MS.gene30750:intron | 45.0% | |
| TTAAGCCACAATCAGGAGCA+TGG | + | chr3.1:60137278-60137297 | None:intergenic | 45.0% | |
| TTGGCATGCTCATCACAACT+AGG | - | chr3.1:60135103-60135122 | MS.gene30750:CDS | 45.0% | |
| ! | AGCACGATCTAGAATGCTGT+TGG | + | chr3.1:60136701-60136720 | None:intergenic | 45.0% |
| ! | AGTCCTTAATTTGGCAACCG+AGG | - | chr3.1:60137483-60137502 | MS.gene30750:CDS | 45.0% |
| ! | TCAGATTCATGATTGGCCAC+AGG | - | chr3.1:60136110-60136129 | MS.gene30750:intron | 45.0% |
| !! | TTTGTCCCCCGATTTTGATC+AGG | - | chr3.1:60136046-60136065 | MS.gene30750:CDS | 45.0% |
| !!! | TTTTGAACGATGACGGGCAA+GGG | + | chr3.1:60137124-60137143 | None:intergenic | 45.0% |
| AAGACTTCCTTCGCCTGGTA+AGG | - | chr3.1:60136746-60136765 | MS.gene30750:intron | 50.0% | |
| AATACTTCCGACACGCAACC+GGG | - | chr3.1:60137388-60137407 | MS.gene30750:CDS | 50.0% | |
| ACACAAAGACTTCCTTCGCC+TGG | - | chr3.1:60136741-60136760 | MS.gene30750:intron | 50.0% | |
| ACAGAAGCAGGAAAAGCCCA+AGG | - | chr3.1:60135501-60135520 | MS.gene30750:intron | 50.0% | |
| AGCACCTTCACTGGAATTGG+TGG | + | chr3.1:60135759-60135778 | None:intergenic | 50.0% | |
| CAGTGGAATCTGCAAGTCAG+TGG | - | chr3.1:60138084-60138103 | MS.gene30750:CDS | 50.0% | |
| CATACACCCAATGTAGACCC+TGG | + | chr3.1:60137148-60137167 | None:intergenic | 50.0% | |
| CCGTCATCGTTCAAAACCCA+GGG | - | chr3.1:60137128-60137147 | MS.gene30750:intron | 50.0% | |
| CTCTTCCATGCTCCTGATTG+TGG | - | chr3.1:60137270-60137289 | MS.gene30750:intron | 50.0% | |
| GTGAAGGAGATGGAGCTGTT+TGG | - | chr3.1:60138137-60138156 | MS.gene30750:CDS | 50.0% | |
| TCGTTTGATTGGAGCTGCAG+TGG | - | chr3.1:60138067-60138086 | MS.gene30750:intron | 50.0% | |
| TTGTGCAGACTGTGAGTGGA+AGG | - | chr3.1:60138018-60138037 | MS.gene30750:intron | 50.0% | |
| !! | CTTCTTGGAAGCACCTTCAC+TGG | + | chr3.1:60135768-60135787 | None:intergenic | 50.0% |
| !! | GGAAGCACCTTCACTGGAAT+TGG | + | chr3.1:60135762-60135781 | None:intergenic | 50.0% |
| !!! | CCCTGGGTTTTGAACGATGA+CGG | + | chr3.1:60137131-60137150 | None:intergenic | 50.0% |
| !!! | CCTGGGTTTTGAACGATGAC+GGG | + | chr3.1:60137130-60137149 | None:intergenic | 50.0% |
| !!! | GTTTTGAACGATGACGGGCA+AGG | + | chr3.1:60137125-60137144 | None:intergenic | 50.0% |
| ATATCTGCCCGGTTGCGTGT+CGG | + | chr3.1:60137398-60137417 | None:intergenic | 55.0% | |
| CCCGTCATCGTTCAAAACCC+AGG | - | chr3.1:60137127-60137146 | MS.gene30750:intron | 55.0% | |
| GATGACCGCAGTATGTGCTG+TGG | - | chr3.1:60137860-60137879 | MS.gene30750:CDS | 55.0% | |
| GGGTTCCACAGCACATACTG+CGG | + | chr3.1:60137868-60137887 | None:intergenic | 55.0% | |
| TCGGCCACCAATTCCAGTGA+AGG | - | chr3.1:60135752-60135771 | MS.gene30750:CDS | 55.0% | |
| TCTGAACCCTCCGGCTTCTA+GGG | + | chr3.1:60137235-60137254 | None:intergenic | 55.0% | |
| TGATCTGCCTTACCAGGCGA+AGG | + | chr3.1:60136756-60136775 | None:intergenic | 55.0% | |
| ! | AGACTGTGAGTGGAAGGCAC+AGG | - | chr3.1:60138024-60138043 | MS.gene30750:intron | 55.0% |
| ATGTGCTGTGGAACCCCTCC+AGG | - | chr3.1:60137872-60137891 | MS.gene30750:CDS | 60.0% | |
| CCTTTCCCCTAGAAGCCGGA+GGG | - | chr3.1:60137226-60137245 | MS.gene30750:intron | 60.0% | |
| CTGAACCCTCCGGCTTCTAG+GGG | + | chr3.1:60137234-60137253 | None:intergenic | 60.0% | |
| GAGGCCTTTCCCCTAGAAGC+CGG | - | chr3.1:60137222-60137241 | MS.gene30750:intron | 60.0% | |
| GTCTGAACCCTCCGGCTTCT+AGG | + | chr3.1:60137236-60137255 | None:intergenic | 60.0% | |
| ! | TGTGAGTGGAAGGCACAGGC+AGG | - | chr3.1:60138028-60138047 | MS.gene30750:intron | 60.0% |
| GCCTTTCCCCTAGAAGCCGG+AGG | - | chr3.1:60137225-60137244 | MS.gene30750:intron | 65.0% | |
| ! | CCCTCCGGCTTCTAGGGGAA+AGG | + | chr3.1:60137229-60137248 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 60135033 | 60138174 | 60135033 | ID=MS.gene30750 |
| chr3.1 | mRNA | 60135033 | 60138174 | 60135033 | ID=MS.gene30750.t1;Parent=MS.gene30750 |
| chr3.1 | exon | 60138083 | 60138174 | 60138083 | ID=MS.gene30750.t1.exon1;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60138083 | 60138174 | 60138083 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60137816 | 60137918 | 60137816 | ID=MS.gene30750.t1.exon2;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60137816 | 60137918 | 60137816 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60137644 | 60137702 | 60137644 | ID=MS.gene30750.t1.exon3;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60137644 | 60137702 | 60137644 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60137332 | 60137534 | 60137332 | ID=MS.gene30750.t1.exon4;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60137332 | 60137534 | 60137332 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60137076 | 60137139 | 60137076 | ID=MS.gene30750.t1.exon5;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60137076 | 60137139 | 60137076 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60136445 | 60136517 | 60136445 | ID=MS.gene30750.t1.exon6;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60136445 | 60136517 | 60136445 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60136230 | 60136350 | 60136230 | ID=MS.gene30750.t1.exon7;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60136230 | 60136350 | 60136230 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60136014 | 60136101 | 60136014 | ID=MS.gene30750.t1.exon8;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60136014 | 60136101 | 60136014 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60135747 | 60135872 | 60135747 | ID=MS.gene30750.t1.exon9;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60135747 | 60135872 | 60135747 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60135314 | 60135423 | 60135314 | ID=MS.gene30750.t1.exon10;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60135314 | 60135423 | 60135314 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| chr3.1 | exon | 60135033 | 60135181 | 60135033 | ID=MS.gene30750.t1.exon11;Parent=MS.gene30750.t1 |
| chr3.1 | CDS | 60135033 | 60135181 | 60135033 | ID=cds.MS.gene30750.t1;Parent=MS.gene30750.t1 |
| Gene Sequence |
| Protein sequence |
