Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35643.t1 | XP_003601131.1 | 92.7 | 478 | 34 | 1 | 1 | 477 | 1 | 478 | 6.00E-225 | 790 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35643.t1 | Q9LT31 | 63.4 | 407 | 130 | 5 | 1 | 390 | 1 | 405 | 5.1e-140 | 499.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35643.t1 | G7J457 | 92.7 | 478 | 34 | 1 | 1 | 477 | 1 | 478 | 4.3e-225 | 790.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene35643 | -0.831446 | 1.66E-55 | -1.69E-46 |
| MS.gene049669 | MS.gene35643 | -0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene35643 | -0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene35643 | -0.809733 | 1.64E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene35643 | -0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene35643 | -0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene35643 | 0.841665 | 4.14E-58 | -1.69E-46 |
| MS.gene061114 | MS.gene35643 | 0.819333 | 1.23E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35643.t1 | MTR_3g073360 | 96.862 | 478 | 14 | 1 | 1 | 477 | 1 | 478 | 0.0 | 941 |
| MS.gene35643.t1 | MTR_3g009180 | 46.133 | 375 | 162 | 4 | 10 | 380 | 13 | 351 | 7.11e-113 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35643.t1 | AT3G19770 | 59.513 | 452 | 144 | 7 | 1 | 429 | 1 | 436 | 0.0 | 524 |
| MS.gene35643.t1 | AT5G09320 | 60.900 | 422 | 140 | 10 | 1 | 408 | 1 | 411 | 8.25e-174 | 495 |
| MS.gene35643.t1 | AT3G19770 | 54.114 | 316 | 106 | 7 | 137 | 429 | 1 | 300 | 4.91e-102 | 310 |
Find 101 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTCGTGCTCTTCTTTC+AGG | 0.092648 | 3.3:-63490290 | MS.gene35643:CDS |
| CTTTCAAAGCTCATCCTCTT+TGG | 0.166383 | 3.3:-63493396 | MS.gene35643:CDS |
| CTAAACTGTTGCAAGGTTAT+TGG | 0.183133 | 3.3:-63491534 | MS.gene35643:CDS |
| ACAAGACTTTCTTGCTAATA+TGG | 0.214200 | 3.3:-63493425 | MS.gene35643:CDS |
| GTTTATTCGACCAGAAAATT+TGG | 0.230820 | 3.3:-63492477 | MS.gene35643:CDS |
| GAATTGAGTTTGTACCTTTA+GGG | 0.268366 | 3.3:+63491428 | None:intergenic |
| AGTTCCATCACTCTCAGATT+TGG | 0.309468 | 3.3:-63490132 | MS.gene35643:CDS |
| TTTCAAAGCTCATCCTCTTT+GGG | 0.311770 | 3.3:-63493395 | MS.gene35643:CDS |
| CTCTCAGATTTGGAGAATAA+AGG | 0.325043 | 3.3:-63490122 | MS.gene35643:CDS |
| CCTACACTAGCAAACATATA+TGG | 0.326586 | 3.3:+63490047 | None:intergenic |
| TGCATCAATGTTTGAGATGA+AGG | 0.345631 | 3.3:+63490358 | None:intergenic |
| AGGGGCAAGTATGATAATTA+AGG | 0.358711 | 3.3:-63490102 | MS.gene35643:CDS |
| AGCTCCAGGAGGATTATCTT+TGG | 0.363959 | 3.3:+63491482 | None:intergenic |
| GACGCCAATCTCGTTTGGTT+GGG | 0.368934 | 3.3:-63490421 | MS.gene35643:CDS |
| GAGTTATCCTCTGATGTATC+AGG | 0.370749 | 3.3:+63489726 | None:intergenic |
| TTTGACGAAATCGGCGGCCG+CGG | 0.383756 | 3.3:+63493603 | None:intergenic |
| TCTCAGATTTGGAGAATAAA+GGG | 0.386680 | 3.3:-63490121 | MS.gene35643:CDS |
| TTGCTCGTGCTCTTCTTTCA+GGG | 0.402976 | 3.3:-63490289 | MS.gene35643:CDS |
| TTTGATGGCTTTGACGAAAT+CGG | 0.409299 | 3.3:+63493594 | None:intergenic |
| ATCGTTTGTAATTCTTTAGC+AGG | 0.422513 | 3.3:+63489997 | None:intergenic |
| GTTTAGACGCCAATCTCGTT+TGG | 0.428125 | 3.3:-63490426 | MS.gene35643:CDS |
| CTGAGCATTAATTTGAGGAT+TGG | 0.430065 | 3.3:+63489911 | None:intergenic |
| AGAAGAGACACCCAATCCTT+TGG | 0.433335 | 3.3:+63489950 | None:intergenic |
| TTTGGAAAGACACACATACT+TGG | 0.443460 | 3.3:+63489968 | None:intergenic |
| TCCTGCTGAGCATTAATTTG+AGG | 0.443479 | 3.3:+63489906 | None:intergenic |
| CGGGCTGACGCATGCGCTCA+AGG | 0.447318 | 3.3:+63493623 | None:intergenic |
| AAAGCTCATCCTCTTTGGGC+TGG | 0.451357 | 3.3:-63493391 | MS.gene35643:CDS |
| GTGTGTCTTTCCAAAGGATT+GGG | 0.451990 | 3.3:-63489960 | MS.gene35643:CDS |
| CTCAGTTTCATCCATCGAAA+TGG | 0.455170 | 3.3:+63490331 | None:intergenic |
| GTCACTGTCTCTCTCAGGAT+CGG | 0.459367 | 3.3:+63493453 | None:intergenic |
| GCTAGTTCCTATCGGTTATG+AGG | 0.461404 | 3.3:+63489635 | None:intergenic |
| CTTCCCCAACCAAACGAGAT+TGG | 0.465068 | 3.3:+63490417 | None:intergenic |
| ATACAAGTAAGTTTGTCTCT+TGG | 0.467430 | 3.3:+63491558 | None:intergenic |
| AGACGCCAATCTCGTTTGGT+TGG | 0.468552 | 3.3:-63490422 | MS.gene35643:CDS |
| CATGATGTTTCGTTCTGAAA+TGG | 0.469832 | 3.3:+63492443 | None:intergenic |
| TGAACAACTTTCAGAGAAGA+TGG | 0.470154 | 3.3:-63492513 | MS.gene35643:CDS |
| TCCTCAAATTAATGCTCAGC+AGG | 0.475789 | 3.3:-63489907 | MS.gene35643:CDS |
| AGAGGAGGCGGCAAACCCTC+TGG | 0.475913 | 3.3:+63489866 | None:intergenic |
| AATGTTTGAGATGAAGGATT+CGG | 0.475951 | 3.3:+63490364 | None:intergenic |
| TTGACGAAATCGGCGGCCGC+GGG | 0.476245 | 3.3:+63493604 | None:intergenic |
| TTCAGGTTTGGCACAGGATG+AGG | 0.476857 | 3.3:-63489682 | MS.gene35643:CDS |
| GAAAACGCCGACGCTTCCTC+TGG | 0.479356 | 3.3:-63493658 | MS.gene35643:CDS |
| AATTCACCTTATCAAAATCA+TGG | 0.481577 | 3.3:-63490242 | MS.gene35643:CDS |
| GATTTGAGTGCAGTTGTGGA+GGG | 0.482098 | 3.3:+63490465 | None:intergenic |
| GCTTCCAAAGATAATCCTCC+TGG | 0.486818 | 3.3:-63491486 | MS.gene35643:CDS |
| TCACTGTCTCTCTCAGGATC+GGG | 0.494208 | 3.3:+63493454 | None:intergenic |
| ATTTCGTCAAAGCCATCAAA+AGG | 0.497514 | 3.3:-63493591 | MS.gene35643:intron |
| CTAGTTCCTATCGGTTATGA+GGG | 0.499567 | 3.3:+63489636 | None:intergenic |
| TGTGTGTCTTTCCAAAGGAT+TGG | 0.507736 | 3.3:-63489961 | MS.gene35643:CDS |
| CAATCCTCAAAATAATGCTC+AGG | 0.511468 | 3.3:-63489826 | MS.gene35643:CDS |
| ACGCCAATCTCGTTTGGTTG+GGG | 0.518389 | 3.3:-63490420 | MS.gene35643:CDS |
| GGCGGCAAACCCTCTGGAAA+GGG | 0.518579 | 3.3:+63489872 | None:intergenic |
| AGTAGATTTGAGTGCAGTTG+TGG | 0.522864 | 3.3:+63490461 | None:intergenic |
| ACGGCGTCACTGTCTCTCTC+AGG | 0.531238 | 3.3:+63493448 | None:intergenic |
| GCTAATCTATGTTACCCTAA+AGG | 0.536558 | 3.3:-63491442 | MS.gene35643:intron |
| AAGTGATTCAGGTTTGGCAC+AGG | 0.537557 | 3.3:-63489688 | MS.gene35643:CDS |
| TTCTCCAAATCTGAGAGTGA+TGG | 0.537645 | 3.3:+63490128 | None:intergenic |
| TCAGAACGAAACATCATGGT+TGG | 0.544171 | 3.3:-63492438 | MS.gene35643:intron |
| GCATTAATTTGAGGATTGGA+TGG | 0.545127 | 3.3:+63489915 | None:intergenic |
| AAGTATGTGTGTCTTTCCAA+AGG | 0.547865 | 3.3:-63489966 | MS.gene35643:CDS |
| CCATATATGTTTGCTAGTGT+AGG | 0.550230 | 3.3:-63490047 | MS.gene35643:CDS |
| AGGGTAACATAGATTAGCAC+AGG | 0.551339 | 3.3:+63491447 | None:intergenic |
| CATTTCAGAACGAAACATCA+TGG | 0.552754 | 3.3:-63492442 | MS.gene35643:CDS |
| AGATTTGAGTGCAGTTGTGG+AGG | 0.554178 | 3.3:+63490464 | None:intergenic |
| GGAAGAAATTCATCAGCTCC+AGG | 0.555756 | 3.3:+63491468 | None:intergenic |
| AGGCGGCAAACCCTCTGGAA+AGG | 0.555765 | 3.3:+63489871 | None:intergenic |
| GGATGGAACATGAGATGAAG+AGG | 0.561692 | 3.3:+63489848 | None:intergenic |
| ACGGAAGAAACTAACTTCAC+CGG | 0.568114 | 3.3:+63493342 | None:intergenic |
| TTGTATTCTAAACTGTTGCA+AGG | 0.570078 | 3.3:-63491541 | MS.gene35643:CDS |
| GAGGCAGCTGCACCAGAGGG+TGG | 0.577158 | 3.3:-63489663 | MS.gene35643:CDS |
| GGCAAGTATGATAATTAAGG+AGG | 0.579130 | 3.3:-63490099 | MS.gene35643:CDS |
| AACATGAGATGAAGAGGAGG+CGG | 0.582983 | 3.3:+63489854 | None:intergenic |
| TGAGCGCATGCGTCAGCCCG+CGG | 0.584848 | 3.3:-63493620 | MS.gene35643:CDS |
| TGATGCAAATGCCATTTCGA+TGG | 0.585306 | 3.3:-63490342 | MS.gene35643:CDS |
| GATGATGAACTCGAAAGTGC+CGG | 0.587723 | 3.3:-63493361 | MS.gene35643:CDS |
| CTCTGGAAAGGGTTTCAACA+TGG | 0.588017 | 3.3:+63489883 | None:intergenic |
| GGATGAGGCAGCTGCACCAG+AGG | 0.592274 | 3.3:-63489667 | MS.gene35643:CDS |
| CAAATCTACTGTACATACAA+AGG | 0.593182 | 3.3:-63490448 | MS.gene35643:CDS |
| GATGTTTCGTTCTGAAATGG+TGG | 0.597900 | 3.3:+63492446 | None:intergenic |
| TTGTGGTCTCACTCTCAACA+TGG | 0.598050 | 3.3:+63489802 | None:intergenic |
| ACAATAGATTCTTCAGACAA+TGG | 0.598478 | 3.3:-63489783 | MS.gene35643:CDS |
| TGGAACTGAAGCAAATACAC+GGG | 0.606683 | 3.3:+63492553 | None:intergenic |
| ATTAGCAAGAAAGTCTTGTA+CGG | 0.609996 | 3.3:+63493429 | None:intergenic |
| CTGGAACTGAAGCAAATACA+CGG | 0.612874 | 3.3:+63492552 | None:intergenic |
| GATGAGGCAGCTGCACCAGA+GGG | 0.615534 | 3.3:-63489666 | MS.gene35643:CDS |
| ATGTTGAAACCCTTTCCAGA+GGG | 0.617465 | 3.3:-63489881 | MS.gene35643:CDS |
| CATGTTGAAACCCTTTCCAG+AGG | 0.617877 | 3.3:-63489882 | MS.gene35643:CDS |
| ACAGAAGATCAACATGTACA+AGG | 0.620589 | 3.3:-63491583 | MS.gene35643:CDS |
| AACTGAGTTTGAGAGAAACA+TGG | 0.628613 | 3.3:-63490315 | MS.gene35643:CDS |
| TCAGAGCAACCAGCCCAAAG+AGG | 0.635777 | 3.3:+63493382 | None:intergenic |
| TGGAACATGAGATGAAGAGG+AGG | 0.643116 | 3.3:+63489851 | None:intergenic |
| GATGGCTTTGACGAAATCGG+CGG | 0.654448 | 3.3:+63493597 | None:intergenic |
| ATTGTCTGAAGAATCTATTG+TGG | 0.654771 | 3.3:+63489785 | None:intergenic |
| AAAGTCTCCTGATACATCAG+AGG | 0.656909 | 3.3:-63489733 | MS.gene35643:CDS |
| CTCAGATTTGGAGAATAAAG+GGG | 0.658898 | 3.3:-63490120 | MS.gene35643:CDS |
| GTGTAAACCAGAGGAAGCGT+CGG | 0.675079 | 3.3:+63493651 | None:intergenic |
| TAGTTCCTATCGGTTATGAG+GGG | 0.675921 | 3.3:+63489637 | None:intergenic |
| AAGGAAGTCGTGTAAACCAG+AGG | 0.678101 | 3.3:+63493642 | None:intergenic |
| AGTTCCTATCGGTTATGAGG+GGG | 0.683453 | 3.3:+63489638 | None:intergenic |
| AGAAATTCATCAGCTCCAGG+AGG | 0.733938 | 3.3:+63491471 | None:intergenic |
| GGAACTGAAGCAAATACACG+GGG | 0.751718 | 3.3:+63492554 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATATCTTCAATTA+TGG | + | chr3.3:63490028-63490047 | None:intergenic | 10.0% |
| !! | AATAAATGAAAATAAGAATA+CGG | + | chr3.3:63489991-63490010 | None:intergenic | 10.0% |
| !!! | ATATTTTATCATTAGAAAAA+AGG | - | chr3.3:63490972-63490991 | MS.gene35643:intron | 10.0% |
| !! | AGAGAGAATATAAAATTTAA+GGG | + | chr3.3:63491674-63491693 | None:intergenic | 15.0% |
| !! | ATAAAATATATGCATATTTG+TGG | + | chr3.3:63492444-63492463 | None:intergenic | 15.0% |
| !! | ATAATTTATTAGAAAAGTGA+AGG | + | chr3.3:63492200-63492219 | None:intergenic | 15.0% |
| !! | CTATATTATAATTGAAAATG+GGG | + | chr3.3:63490634-63490653 | None:intergenic | 15.0% |
| !! | GCTATATTATAATTGAAAAT+GGG | + | chr3.3:63490635-63490654 | None:intergenic | 15.0% |
| !! | TAAAATATATGCATATTTGT+GGG | + | chr3.3:63492443-63492462 | None:intergenic | 15.0% |
| !! | TATGTATTTCTTAATAACTT+TGG | + | chr3.3:63491162-63491181 | None:intergenic | 15.0% |
| !! | TGCTATATTATAATTGAAAA+TGG | + | chr3.3:63490636-63490655 | None:intergenic | 15.0% |
| !! | TTATTTACAAACTAATATTG+TGG | + | chr3.3:63491531-63491550 | None:intergenic | 15.0% |
| !!! | AAATAACTAGTTTGTTAATT+AGG | - | chr3.3:63490209-63490228 | MS.gene35643:CDS | 15.0% |
| !!! | GTCAAAATTGTAATTTTTAT+TGG | + | chr3.3:63491620-63491639 | None:intergenic | 15.0% |
| !!! | TCACTTTTCTAATAAATTAT+GGG | - | chr3.3:63492200-63492219 | MS.gene35643:intron | 15.0% |
| !!! | TTCACTTTTCTAATAAATTA+TGG | - | chr3.3:63492199-63492218 | MS.gene35643:intron | 15.0% |
| !! | GAGAGAGAATATAAAATTTA+AGG | + | chr3.3:63491675-63491694 | None:intergenic | 20.0% |
| !! | GATAAAATATTGTTATCGTT+GGG | + | chr3.3:63490962-63490981 | None:intergenic | 20.0% |
| !! | TGATAAAATATTGTTATCGT+TGG | + | chr3.3:63490963-63490982 | None:intergenic | 20.0% |
| !! | TTCAATTATAATATAGCAGT+TGG | - | chr3.3:63490638-63490657 | MS.gene35643:intron | 20.0% |
| !!! | AATTGAATCAATTGATTCTT+AGG | + | chr3.3:63491476-63491495 | None:intergenic | 20.0% |
| !!! | ATATTCCTAAACTCTATTTT+AGG | - | chr3.3:63492747-63492766 | MS.gene35643:intron | 20.0% |
| !!! | ATGAATTGTTTCTATAACAA+AGG | - | chr3.3:63490302-63490321 | MS.gene35643:CDS | 20.0% |
| !!! | CTATGTATTTCAATGTTTTT+TGG | - | chr3.3:63491387-63491406 | MS.gene35643:intron | 20.0% |
| !!! | GGAAGTAATAAAAACATTTT+TGG | + | chr3.3:63492179-63492198 | None:intergenic | 20.0% |
| !!! | GGAATAAAATGTTTTGTAAA+AGG | + | chr3.3:63491946-63491965 | None:intergenic | 20.0% |
| !!! | TACAAAACATTTTATTCCAA+TGG | - | chr3.3:63491948-63491967 | MS.gene35643:intron | 20.0% |
| !!! | TTACAATTTTGACTTGTTAA+TGG | - | chr3.3:63491627-63491646 | MS.gene35643:intron | 20.0% |
| !!! | TTGATAGCAAAATATTTCAA+AGG | + | chr3.3:63492542-63492561 | None:intergenic | 20.0% |
| !!! | TTGTAAAAGGTCTTATAATT+AGG | + | chr3.3:63491933-63491952 | None:intergenic | 20.0% |
| !!! | TTTAAAACTGAACTAAAAGA+CGG | + | chr3.3:63491089-63491108 | None:intergenic | 20.0% |
| !!! | TTTTAAGAAAAGTCTTCTAT+TGG | - | chr3.3:63492805-63492824 | MS.gene35643:intron | 20.0% |
| !!! | TTTTCTAATAAATTATGGGT+AGG | - | chr3.3:63492204-63492223 | MS.gene35643:intron | 20.0% |
| ! | AAATAATGATTGCCAATTGT+GGG | - | chr3.3:63491545-63491564 | MS.gene35643:CDS | 25.0% |
| ! | AATGTATCAGTGAATTGATT+AGG | + | chr3.3:63489788-63489807 | None:intergenic | 25.0% |
| ! | AATTATGTTCAATGAATGCT+AGG | - | chr3.3:63491007-63491026 | MS.gene35643:intron | 25.0% |
| ! | AATTCACCTTATCAAAATCA+TGG | - | chr3.3:63493069-63493088 | MS.gene35643:intron | 25.0% |
| ! | AGAAAATATGTTAGTTGAGT+AGG | + | chr3.3:63491207-63491226 | None:intergenic | 25.0% |
| ! | ATATAAAATTTAAGGGATGC+AGG | + | chr3.3:63491667-63491686 | None:intergenic | 25.0% |
| ! | ATGTATCAGTGAATTGATTA+GGG | + | chr3.3:63489787-63489806 | None:intergenic | 25.0% |
| ! | ATGTATCTACAAATTTGTAG+AGG | + | chr3.3:63492002-63492021 | None:intergenic | 25.0% |
| ! | ATGTGATGAAACTAGATAAA+TGG | - | chr3.3:63492591-63492610 | MS.gene35643:intron | 25.0% |
| ! | CCTATAAAGTGTATTAGTAA+GGG | + | chr3.3:63492047-63492066 | None:intergenic | 25.0% |
| ! | CTTGTCGTATAGAATTAATT+TGG | - | chr3.3:63492150-63492169 | MS.gene35643:intron | 25.0% |
| ! | GAAAATATGTTAGTTGAGTA+GGG | + | chr3.3:63491206-63491225 | None:intergenic | 25.0% |
| ! | GCAAAATATTTCAAAGGAAA+AGG | + | chr3.3:63492536-63492555 | None:intergenic | 25.0% |
| ! | GTATTAGTAAGGGATATATT+TGG | + | chr3.3:63492037-63492056 | None:intergenic | 25.0% |
| ! | TAAATAATGATTGCCAATTG+TGG | - | chr3.3:63491544-63491563 | MS.gene35643:CDS | 25.0% |
| ! | TAACTTTATCCACATGAAAA+TGG | + | chr3.3:63492775-63492794 | None:intergenic | 25.0% |
| ! | TATATTCTCTCTCATTCTTA+TGG | - | chr3.3:63491682-63491701 | MS.gene35643:intron | 25.0% |
| ! | TCATTGAACATAATTACACA+TGG | + | chr3.3:63491002-63491021 | None:intergenic | 25.0% |
| ! | TCCTATAAAGTGTATTAGTA+AGG | + | chr3.3:63492048-63492067 | None:intergenic | 25.0% |
| ! | TGTATCTACAAATTTGTAGA+GGG | + | chr3.3:63492001-63492020 | None:intergenic | 25.0% |
| ! | TTAAAACTGAACTAAAAGAC+GGG | + | chr3.3:63491088-63491107 | None:intergenic | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | + | chr3.3:63490235-63490254 | None:intergenic | 25.0% |
| ! | TTGAAATTAAGATGGTGAAA+AGG | + | chr3.3:63489758-63489777 | None:intergenic | 25.0% |
| ! | TTTAGTGCATCATTGAATTT+AGG | - | chr3.3:63492662-63492681 | MS.gene35643:intron | 25.0% |
| !! | AAAGGTCTTATAATTAGGAA+CGG | + | chr3.3:63491928-63491947 | None:intergenic | 25.0% |
| !! | AATCATGGGTCTTATATATA+TGG | + | chr3.3:63492075-63492094 | None:intergenic | 25.0% |
| !! | AGACTTTTCTGATTTTTCAT+TGG | + | chr3.3:63493565-63493584 | None:intergenic | 25.0% |
| !! | ATAGTTTCGTTTTCAAATCA+TGG | - | chr3.3:63489833-63489852 | MS.gene35643:CDS | 25.0% |
| !! | ATCATGGGTCTTATATATAT+GGG | + | chr3.3:63492074-63492093 | None:intergenic | 25.0% |
| !! | ATTTAAATTGACTGGTTCTT+GGG | - | chr3.3:63491362-63491381 | MS.gene35643:intron | 25.0% |
| !! | GCAGTAAATAAGTTCTAATA+AGG | - | chr3.3:63490399-63490418 | MS.gene35643:CDS | 25.0% |
| !! | TAACATATTTTCTCTGACAT+GGG | - | chr3.3:63491214-63491233 | MS.gene35643:intron | 25.0% |
| !! | TTAATTGTTTAAAACACGAG+TGG | - | chr3.3:63490153-63490172 | MS.gene35643:CDS | 25.0% |
| !!! | ATAAGTTGAATGATGTTTTC+AGG | - | chr3.3:63493235-63493254 | MS.gene35643:intron | 25.0% |
| !!! | ATGATTTTGATAAGGTGAAT+TGG | + | chr3.3:63493070-63493089 | None:intergenic | 25.0% |
| !!! | TAAGTTGAATGATGTTTTCA+GGG | - | chr3.3:63493236-63493255 | MS.gene35643:intron | 25.0% |
| !!! | TATTCAGTTTGTTCTAAAGT+TGG | - | chr3.3:63491419-63491438 | MS.gene35643:intron | 25.0% |
| !!! | TGATTTTGATAAGGTGAATT+GGG | + | chr3.3:63493069-63493088 | None:intergenic | 25.0% |
| AAACAATGCTAGCACTTTAA+GGG | + | chr3.3:63490592-63490611 | None:intergenic | 30.0% | |
| AAAGTGGCAAAGTAAAAGTA+TGG | + | chr3.3:63492255-63492274 | None:intergenic | 30.0% | |
| AAATATCATCTTGCAAACAC+TGG | - | chr3.3:63492390-63492409 | MS.gene35643:intron | 30.0% | |
| AAATGTTGACAGAAAACGAA+TGG | + | chr3.3:63491331-63491350 | None:intergenic | 30.0% | |
| AAGTGCTAGAAAAATTCTTC+CGG | - | chr3.3:63491568-63491587 | MS.gene35643:CDS | 30.0% | |
| AATCACTCGTCACTATTTAT+AGG | + | chr3.3:63490539-63490558 | None:intergenic | 30.0% | |
| AATCACTTATGAGACTGTAT+GGG | + | chr3.3:63490376-63490395 | None:intergenic | 30.0% | |
| ACAAGACTTTCTTGCTAATA+TGG | - | chr3.3:63489886-63489905 | MS.gene35643:CDS | 30.0% | |
| ACAATAGATTCTTCAGACAA+TGG | - | chr3.3:63493528-63493547 | MS.gene35643:intron | 30.0% | |
| AGAATTGAGTTTGTACCTTT+AGG | + | chr3.3:63491887-63491906 | None:intergenic | 30.0% | |
| AGCAATCAATCAGCAAATAT+AGG | + | chr3.3:63490676-63490695 | None:intergenic | 30.0% | |
| ATACAAGTAAGTTTGTCTCT+TGG | + | chr3.3:63491756-63491775 | None:intergenic | 30.0% | |
| ATCACTCGTCACTATTTATA+GGG | + | chr3.3:63490538-63490557 | None:intergenic | 30.0% | |
| ATCGTTTGTAATTCTTTAGC+AGG | + | chr3.3:63493317-63493336 | None:intergenic | 30.0% | |
| ATGCATATTTGTGGGTAATA+TGG | + | chr3.3:63492435-63492454 | None:intergenic | 30.0% | |
| ATTGTCTGAAGAATCTATTG+TGG | + | chr3.3:63493529-63493548 | None:intergenic | 30.0% | |
| CAAATCTACTGTACATACAA+AGG | - | chr3.3:63492863-63492882 | MS.gene35643:intron | 30.0% | |
| CCAAATGCATTTAAATTGAC+TGG | - | chr3.3:63491354-63491373 | MS.gene35643:intron | 30.0% | |
| CCAGTAAATAAGCTCAAATA+AGG | - | chr3.3:63490435-63490454 | MS.gene35643:CDS | 30.0% | |
| CCAGTCAATTTAAATGCATT+TGG | + | chr3.3:63491357-63491376 | None:intergenic | 30.0% | |
| CCCTTACTAATACACTTTAT+AGG | - | chr3.3:63492044-63492063 | MS.gene35643:intron | 30.0% | |
| CTAACTAACCTATGAACTAA+GGG | + | chr3.3:63490477-63490496 | None:intergenic | 30.0% | |
| CTTCATAAAAAAGACAACTC+CGG | + | chr3.3:63491590-63491609 | None:intergenic | 30.0% | |
| GAATTGAGTTTGTACCTTTA+GGG | + | chr3.3:63491886-63491905 | None:intergenic | 30.0% | |
| GATAGTGTGTAAAGATAGTT+AGG | - | chr3.3:63490496-63490515 | MS.gene35643:intron | 30.0% | |
| GTTTATTCGACCAGAAAATT+TGG | - | chr3.3:63490834-63490853 | MS.gene35643:intron | 30.0% | |
| TAATCACTTATGAGACTGTA+TGG | + | chr3.3:63490377-63490396 | None:intergenic | 30.0% | |
| TACTGAAAAACAAAGCAAAG+TGG | + | chr3.3:63492271-63492290 | None:intergenic | 30.0% | |
| TAGCATTGTTTGTAATCGAA+GGG | - | chr3.3:63490601-63490620 | MS.gene35643:intron | 30.0% | |
| TCTAACTAACCTATGAACTA+AGG | + | chr3.3:63490478-63490497 | None:intergenic | 30.0% | |
| TCTCAGATTTGGAGAATAAA+GGG | - | chr3.3:63493190-63493209 | MS.gene35643:intron | 30.0% | |
| TGAGTTTGATATTGCTACAT+TGG | + | chr3.3:63491046-63491065 | None:intergenic | 30.0% | |
| TTGATATTGCTACATTGGAT+TGG | + | chr3.3:63491041-63491060 | None:intergenic | 30.0% | |
| TTGTATTCTAAACTGTTGCA+AGG | - | chr3.3:63491770-63491789 | MS.gene35643:intron | 30.0% | |
| ! | AAATGCAACTGTACACTTTT+TGG | - | chr3.3:63491109-63491128 | MS.gene35643:intron | 30.0% |
| ! | AAGTGGCAAAGTAAAAGTAT+GGG | + | chr3.3:63492254-63492273 | None:intergenic | 30.0% |
| ! | AATGTCTTTTGAACTTCTCA+TGG | - | chr3.3:63492500-63492519 | MS.gene35643:CDS | 30.0% |
| ! | AATGTTTGAGATGAAGGATT+CGG | + | chr3.3:63492950-63492969 | None:intergenic | 30.0% |
| ! | ATAAGACCCATGATTTTTGT+TGG | - | chr3.3:63492080-63492099 | MS.gene35643:intron | 30.0% |
| ! | ATTAGCAAGAAAGTCTTGTA+CGG | + | chr3.3:63489885-63489904 | None:intergenic | 30.0% |
| ! | ATTGATTCTTAGGAAAAGCT+TGG | + | chr3.3:63491466-63491485 | None:intergenic | 30.0% |
| ! | CATTTAAATTGACTGGTTCT+TGG | - | chr3.3:63491361-63491380 | MS.gene35643:intron | 30.0% |
| ! | CCTTATTTGAGCTTATTTAC+TGG | + | chr3.3:63490438-63490457 | None:intergenic | 30.0% |
| ! | CTAACATATTTTCTCTGACA+TGG | - | chr3.3:63491213-63491232 | MS.gene35643:intron | 30.0% |
| ! | CTAATTTTGCATCAGATGAT+GGG | + | chr3.3:63493116-63493135 | None:intergenic | 30.0% |
| ! | GAAAAAAAGTGATTCAGGTT+TGG | - | chr3.3:63493617-63493636 | MS.gene35643:CDS | 30.0% |
| ! | GCAAACTTTATTTGTACAAG+TGG | + | chr3.3:63492302-63492321 | None:intergenic | 30.0% |
| ! | TAAGACCCATGATTTTTGTT+GGG | - | chr3.3:63492081-63492100 | MS.gene35643:intron | 30.0% |
| ! | TAATTTTGCATCAGATGATG+GGG | + | chr3.3:63493115-63493134 | None:intergenic | 30.0% |
| ! | TCATCATGTTTTACATCATC+TGG | + | chr3.3:63490781-63490800 | None:intergenic | 30.0% |
| ! | TCTAATTTTGCATCAGATGA+TGG | + | chr3.3:63493117-63493136 | None:intergenic | 30.0% |
| ! | TGTAGAGGGTCTTATATTTA+GGG | + | chr3.3:63491987-63492006 | None:intergenic | 30.0% |
| ! | TTGTAGAGGGTCTTATATTT+AGG | + | chr3.3:63491988-63492007 | None:intergenic | 30.0% |
| !! | AGTTTGTTCTAAAGTTGGAT+GGG | - | chr3.3:63491424-63491443 | MS.gene35643:intron | 30.0% |
| !! | TTTGTTAATTAGGCCTTGTT+TGG | - | chr3.3:63490219-63490238 | MS.gene35643:CDS | 30.0% |
| !!! | TGTCTTTTTTATGAAGGCTT+TGG | - | chr3.3:63491594-63491613 | MS.gene35643:CDS | 30.0% |
| AAAGATAGTTAGGCCAAACA+AGG | - | chr3.3:63490506-63490525 | MS.gene35643:intron | 35.0% | |
| AACTGAGTTTGAGAGAAACA+TGG | - | chr3.3:63492996-63493015 | MS.gene35643:intron | 35.0% | |
| AAGTATGTGTGTCTTTCCAA+AGG | - | chr3.3:63493345-63493364 | MS.gene35643:intron | 35.0% | |
| ACAGAAGATCAACATGTACA+AGG | - | chr3.3:63491728-63491747 | MS.gene35643:intron | 35.0% | |
| AGCATTGTTTGTAATCGAAG+GGG | - | chr3.3:63490602-63490621 | MS.gene35643:intron | 35.0% | |
| AGGGGCAAGTATGATAATTA+AGG | - | chr3.3:63493209-63493228 | MS.gene35643:intron | 35.0% | |
| ATTTCGTCAAAGCCATCAAA+AGG | - | chr3.3:63489720-63489739 | MS.gene35643:CDS | 35.0% | |
| CAAACAATGCTAGCACTTTA+AGG | + | chr3.3:63490593-63490612 | None:intergenic | 35.0% | |
| CAATCCTCAAAATAATGCTC+AGG | - | chr3.3:63493485-63493504 | MS.gene35643:CDS | 35.0% | |
| CATTTCAGAACGAAACATCA+TGG | - | chr3.3:63490869-63490888 | MS.gene35643:intron | 35.0% | |
| CCTACACTAGCAAACATATA+TGG | + | chr3.3:63493267-63493286 | None:intergenic | 35.0% | |
| CCTGAGAAAAAAAGTGATTC+AGG | - | chr3.3:63493612-63493631 | MS.gene35643:CDS | 35.0% | |
| CTAAACTGTTGCAAGGTTAT+TGG | - | chr3.3:63491777-63491796 | MS.gene35643:intron | 35.0% | |
| CTAGCATTGTTTGTAATCGA+AGG | - | chr3.3:63490600-63490619 | MS.gene35643:intron | 35.0% | |
| CTCAGATTTGGAGAATAAAG+GGG | - | chr3.3:63493191-63493210 | MS.gene35643:intron | 35.0% | |
| CTCTCAGATTTGGAGAATAA+AGG | - | chr3.3:63493189-63493208 | MS.gene35643:intron | 35.0% | |
| GAAAGAATAGCATCAAAGCT+AGG | - | chr3.3:63492710-63492729 | MS.gene35643:intron | 35.0% | |
| GACATCCCAACAAAAATCAT+GGG | + | chr3.3:63492089-63492108 | None:intergenic | 35.0% | |
| GCTAATCTATGTTACCCTAA+AGG | - | chr3.3:63491869-63491888 | MS.gene35643:intron | 35.0% | |
| GGCAAGTATGATAATTAAGG+AGG | - | chr3.3:63493212-63493231 | MS.gene35643:intron | 35.0% | |
| GGTACCTATAATGTGTAACA+CGG | + | chr3.3:63491310-63491329 | None:intergenic | 35.0% | |
| GGTTCGGATTGAAATTAAGA+TGG | + | chr3.3:63489766-63489785 | None:intergenic | 35.0% | |
| GTAGGACTTACGAATATGTA+GGG | - | chr3.3:63492222-63492241 | MS.gene35643:intron | 35.0% | |
| GTCTTATAATTAGGAACGGA+GGG | + | chr3.3:63491924-63491943 | None:intergenic | 35.0% | |
| GTTGGGATGTCCTATAAAAA+GGG | - | chr3.3:63492098-63492117 | MS.gene35643:intron | 35.0% | |
| TACAACAGGACAATGTTCAA+CGG | - | chr3.3:63492359-63492378 | MS.gene35643:intron | 35.0% | |
| TATGGTTATGCTGTGATGAA+TGG | + | chr3.3:63492417-63492436 | None:intergenic | 35.0% | |
| TCAGTGAATTGATTAGGGTT+CGG | + | chr3.3:63489782-63489801 | None:intergenic | 35.0% | |
| TGAACAACTTTCAGAGAAGA+TGG | - | chr3.3:63490798-63490817 | MS.gene35643:intron | 35.0% | |
| TGGCACCTAAAATAGAGTTT+AGG | + | chr3.3:63492755-63492774 | None:intergenic | 35.0% | |
| TGTTGGGATGTCCTATAAAA+AGG | - | chr3.3:63492097-63492116 | MS.gene35643:intron | 35.0% | |
| TTAAGATGGTGAAAAGGAGA+AGG | + | chr3.3:63489752-63489771 | None:intergenic | 35.0% | |
| TTCTCCGTGTTACACATTAT+AGG | - | chr3.3:63491303-63491322 | MS.gene35643:intron | 35.0% | |
| TTTCAAAGCTCATCCTCTTT+GGG | - | chr3.3:63489916-63489935 | MS.gene35643:CDS | 35.0% | |
| TTTCAATTTGATGCACCACT+GGG | - | chr3.3:63491495-63491514 | MS.gene35643:CDS | 35.0% | |
| TTTCTTGTGACATGTACAAC+AGG | - | chr3.3:63492345-63492364 | MS.gene35643:intron | 35.0% | |
| TTTGGAAAGACACACATACT+TGG | + | chr3.3:63493346-63493365 | None:intergenic | 35.0% | |
| ! | AGCTTATTTACTGGTCTGTT+TGG | + | chr3.3:63490429-63490448 | None:intergenic | 35.0% |
| ! | CCATATATGTTTGCTAGTGT+AGG | - | chr3.3:63493264-63493283 | MS.gene35643:intron | 35.0% |
| ! | CTACATCTACATTGCAGTTT+TGG | - | chr3.3:63490121-63490140 | MS.gene35643:CDS | 35.0% |
| ! | CTGAGCATTAATTTGAGGAT+TGG | + | chr3.3:63493403-63493422 | None:intergenic | 35.0% |
| ! | GATTTTTCATTGGAAGCTAC+AGG | + | chr3.3:63493555-63493574 | None:intergenic | 35.0% |
| ! | GCATTAATTTGAGGATTGGA+TGG | + | chr3.3:63493399-63493418 | None:intergenic | 35.0% |
| ! | TGCATCAATGTTTGAGATGA+AGG | + | chr3.3:63492956-63492975 | None:intergenic | 35.0% |
| ! | TTCTATTGGTGATACTATGC+AGG | - | chr3.3:63492819-63492838 | MS.gene35643:intron | 35.0% |
| ! | TTTTCAATTTGATGCACCAC+TGG | - | chr3.3:63491494-63491513 | MS.gene35643:CDS | 35.0% |
| !! | CAGTTTGTTCTAAAGTTGGA+TGG | - | chr3.3:63491423-63491442 | MS.gene35643:intron | 35.0% |
| !! | CATGATGTTTCGTTCTGAAA+TGG | + | chr3.3:63490871-63490890 | None:intergenic | 35.0% |
| !! | CATTGCAGTTTTGGCAATAA+TGG | - | chr3.3:63490130-63490149 | MS.gene35643:CDS | 35.0% |
| !! | TGCTGTCCATGATTTTGATA+AGG | + | chr3.3:63493078-63493097 | None:intergenic | 35.0% |
| !! | TTTGATGGCTTTGACGAAAT+CGG | + | chr3.3:63489720-63489739 | None:intergenic | 35.0% |
| !!! | CCTGAATCACTTTTTTTCTC+AGG | + | chr3.3:63493615-63493634 | None:intergenic | 35.0% |
| !!! | CGGAGTTGTCTTTTTTATGA+AGG | - | chr3.3:63491588-63491607 | MS.gene35643:CDS | 35.0% |
| !!! | CTGAGCATTATTTTGAGGAT+TGG | + | chr3.3:63493487-63493506 | None:intergenic | 35.0% |
| !!! | GCATTATTTTGAGGATTGGA+TGG | + | chr3.3:63493483-63493502 | None:intergenic | 35.0% |
| !!! | TTTTAGGTGCCATTTTCATG+TGG | - | chr3.3:63492763-63492782 | MS.gene35643:intron | 35.0% |
| AAAGTCTCCTGATACATCAG+AGG | - | chr3.3:63493578-63493597 | MS.gene35643:intron | 40.0% | |
| AACTTTGGTCGCTAGTTAGT+TGG | + | chr3.3:63491147-63491166 | None:intergenic | 40.0% | |
| ACAACAGGACAATGTTCAAC+GGG | - | chr3.3:63492360-63492379 | MS.gene35643:intron | 40.0% | |
| ACGGAAGAAACTAACTTCAC+CGG | + | chr3.3:63489972-63489991 | None:intergenic | 40.0% | |
| ACTAACCTATGAACTAAGGG+TGG | + | chr3.3:63490474-63490493 | None:intergenic | 40.0% | |
| AGAGAGGATCATCTTGTCAT+TGG | - | chr3.3:63490561-63490580 | MS.gene35643:intron | 40.0% | |
| AGGGTAACATAGATTAGCAC+AGG | + | chr3.3:63491867-63491886 | None:intergenic | 40.0% | |
| AGTAGATTTGAGTGCAGTTG+TGG | + | chr3.3:63492853-63492872 | None:intergenic | 40.0% | |
| AGTTCCATCACTCTCAGATT+TGG | - | chr3.3:63493179-63493198 | MS.gene35643:intron | 40.0% | |
| ATGTTGAAACCCTTTCCAGA+GGG | - | chr3.3:63493430-63493449 | MS.gene35643:CDS | 40.0% | |
| CTCAGTTTCATCCATCGAAA+TGG | + | chr3.3:63492983-63493002 | None:intergenic | 40.0% | |
| CTGGAACTGAAGCAAATACA+CGG | + | chr3.3:63490762-63490781 | None:intergenic | 40.0% | |
| CTTTCAAAGCTCATCCTCTT+TGG | - | chr3.3:63489915-63489934 | MS.gene35643:CDS | 40.0% | |
| GAGAGGATCATCTTGTCATT+GGG | - | chr3.3:63490562-63490581 | MS.gene35643:intron | 40.0% | |
| GAGTTATCCTCTGATGTATC+AGG | + | chr3.3:63493588-63493607 | None:intergenic | 40.0% | |
| GATTGATTGCTCTTACCTCT+GGG | - | chr3.3:63490685-63490704 | MS.gene35643:intron | 40.0% | |
| GGACATCCCAACAAAAATCA+TGG | + | chr3.3:63492090-63492109 | None:intergenic | 40.0% | |
| GGATGTCCTATAAAAAGGGT+GGG | - | chr3.3:63492102-63492121 | MS.gene35643:intron | 40.0% | |
| GGGACAAAACTTTAGACCAT+TGG | + | chr3.3:63491967-63491986 | None:intergenic | 40.0% | |
| GGTAGGACTTACGAATATGT+AGG | - | chr3.3:63492221-63492240 | MS.gene35643:intron | 40.0% | |
| GTGTGTCTTTCCAAAGGATT+GGG | - | chr3.3:63493351-63493370 | MS.gene35643:intron | 40.0% | |
| TCAGAACGAAACATCATGGT+TGG | - | chr3.3:63490873-63490892 | MS.gene35643:intron | 40.0% | |
| TCCTCAAATTAATGCTCAGC+AGG | - | chr3.3:63493404-63493423 | MS.gene35643:CDS | 40.0% | |
| TGATTGATTGCTCTTACCTC+TGG | - | chr3.3:63490684-63490703 | MS.gene35643:intron | 40.0% | |
| TGGAACTGAAGCAAATACAC+GGG | + | chr3.3:63490761-63490780 | None:intergenic | 40.0% | |
| TGTACATGATCAAAACCCAG+AGG | + | chr3.3:63490703-63490722 | None:intergenic | 40.0% | |
| TGTGTGTCTTTCCAAAGGAT+TGG | - | chr3.3:63493350-63493369 | MS.gene35643:intron | 40.0% | |
| TTCTCCAAATCTGAGAGTGA+TGG | + | chr3.3:63493186-63493205 | None:intergenic | 40.0% | |
| ! | AGAAGGAAGGAACCTTTTGA+TGG | + | chr3.3:63489735-63489754 | None:intergenic | 40.0% |
| ! | GGCTTGATGTCCAAATTTTC+TGG | + | chr3.3:63490847-63490866 | None:intergenic | 40.0% |
| ! | GGTCTTATAATTAGGAACGG+AGG | + | chr3.3:63491925-63491944 | None:intergenic | 40.0% |
| ! | TCCTGCTGAGCATTAATTTG+AGG | + | chr3.3:63493408-63493427 | None:intergenic | 40.0% |
| ! | TGATGCAAATGCCATTTCGA+TGG | - | chr3.3:63492969-63492988 | MS.gene35643:intron | 40.0% |
| ! | TTTCTAGCACTTCCCACAAT+TGG | + | chr3.3:63491560-63491579 | None:intergenic | 40.0% |
| !! | CTGGGTTTTGATCATGTACA+GGG | - | chr3.3:63490703-63490722 | MS.gene35643:intron | 40.0% |
| !! | GATGTTTCGTTCTGAAATGG+TGG | + | chr3.3:63490868-63490887 | None:intergenic | 40.0% |
| !! | TCTGGGTTTTGATCATGTAC+AGG | - | chr3.3:63490702-63490721 | MS.gene35643:intron | 40.0% |
| !! | TGGTCCTGAGCATTATTTTG+AGG | + | chr3.3:63493492-63493511 | None:intergenic | 40.0% |
| AACATGAGATGAAGAGGAGG+CGG | + | chr3.3:63493460-63493479 | None:intergenic | 45.0% | |
| AAGGAAGTCGTGTAAACCAG+AGG | + | chr3.3:63489672-63489691 | None:intergenic | 45.0% | |
| ACAGACCACCCTTAGTTCAT+AGG | - | chr3.3:63490466-63490485 | MS.gene35643:CDS | 45.0% | |
| AGAAATTCATCAGCTCCAGG+AGG | + | chr3.3:63491843-63491862 | None:intergenic | 45.0% | |
| AGAAGAGACACCCAATCCTT+TGG | + | chr3.3:63493364-63493383 | None:intergenic | 45.0% | |
| AGATTTGAGTGCAGTTGTGG+AGG | + | chr3.3:63492850-63492869 | None:intergenic | 45.0% | |
| AGCTCCAGGAGGATTATCTT+TGG | + | chr3.3:63491832-63491851 | None:intergenic | 45.0% | |
| AGTCTCACAGTCTCATACGT+AGG | + | chr3.3:63492620-63492639 | None:intergenic | 45.0% | |
| AGTGACGAGTGATTAGAGAG+AGG | - | chr3.3:63490545-63490564 | MS.gene35643:intron | 45.0% | |
| CATGTTGAAACCCTTTCCAG+AGG | - | chr3.3:63493429-63493448 | MS.gene35643:CDS | 45.0% | |
| GATGGTGAAAAGGAGAAGGA+AGG | + | chr3.3:63489748-63489767 | None:intergenic | 45.0% | |
| GATTTGAGTGCAGTTGTGGA+GGG | + | chr3.3:63492849-63492868 | None:intergenic | 45.0% | |
| GCTTCCAAAGATAATCCTCC+TGG | - | chr3.3:63491825-63491844 | MS.gene35643:intron | 45.0% | |
| GGAACTGAAGCAAATACACG+GGG | + | chr3.3:63490760-63490779 | None:intergenic | 45.0% | |
| GGAAGAAATTCATCAGCTCC+AGG | + | chr3.3:63491846-63491865 | None:intergenic | 45.0% | |
| GGATGGAACATGAGATGAAG+AGG | + | chr3.3:63493466-63493485 | None:intergenic | 45.0% | |
| GGGATGTCCTATAAAAAGGG+TGG | - | chr3.3:63492101-63492120 | MS.gene35643:intron | 45.0% | |
| GTCCTATAAAAAGGGTGGGA+GGG | - | chr3.3:63492106-63492125 | MS.gene35643:intron | 45.0% | |
| GTCGCTAGTTAGTTGGCATT+GGG | + | chr3.3:63491140-63491159 | None:intergenic | 45.0% | |
| GTTTAGACGCCAATCTCGTT+TGG | - | chr3.3:63492885-63492904 | MS.gene35643:intron | 45.0% | |
| TGAACTAAGGGTGGTCTGTT+TGG | + | chr3.3:63490465-63490484 | None:intergenic | 45.0% | |
| TGGAACATGAGATGAAGAGG+AGG | + | chr3.3:63493463-63493482 | None:intergenic | 45.0% | |
| TGTCCTATAAAAAGGGTGGG+AGG | - | chr3.3:63492105-63492124 | MS.gene35643:intron | 45.0% | |
| TGTGTAACACGGAGAAAGCA+TGG | + | chr3.3:63491299-63491318 | None:intergenic | 45.0% | |
| TTGCTCGTGCTCTTCTTTCA+GGG | - | chr3.3:63493022-63493041 | MS.gene35643:intron | 45.0% | |
| TTGTGGTCTCACTCTCAACA+TGG | + | chr3.3:63493512-63493531 | None:intergenic | 45.0% | |
| TTTGCTCGTGCTCTTCTTTC+AGG | - | chr3.3:63493021-63493040 | MS.gene35643:intron | 45.0% | |
| ! | AAGTGATTCAGGTTTGGCAC+AGG | - | chr3.3:63493623-63493642 | MS.gene35643:CDS | 45.0% |
| ! | CTCTGGAAAGGGTTTCAACA+TGG | + | chr3.3:63493431-63493450 | None:intergenic | 45.0% |
| ! | GATGATGAACTCGAAAGTGC+CGG | - | chr3.3:63489950-63489969 | MS.gene35643:CDS | 45.0% |
| ! | TATAGGGAGCATGCCTTGTT+TGG | + | chr3.3:63490522-63490541 | None:intergenic | 45.0% |
| !! | AAATTTAAATTATAAGAATA+GGG | + | chr3.3:63491256-63491275 | None:intergenic | 5.0% |
| !! | TAAATTTAAATTATAAGAAT+AGG | + | chr3.3:63491257-63491276 | None:intergenic | 5.0% |
| AAAGCTCATCCTCTTTGGGC+TGG | - | chr3.3:63489920-63489939 | MS.gene35643:CDS | 50.0% | |
| ACGCCAATCTCGTTTGGTTG+GGG | - | chr3.3:63492891-63492910 | MS.gene35643:intron | 50.0% | |
| AGACGCCAATCTCGTTTGGT+TGG | - | chr3.3:63492889-63492908 | MS.gene35643:intron | 50.0% | |
| CTTCCCCAACCAAACGAGAT+TGG | + | chr3.3:63492897-63492916 | None:intergenic | 50.0% | |
| GACGCCAATCTCGTTTGGTT+GGG | - | chr3.3:63492890-63492909 | MS.gene35643:intron | 50.0% | |
| GGTCGCTAGTTAGTTGGCAT+TGG | + | chr3.3:63491141-63491160 | None:intergenic | 50.0% | |
| GTCACTGTCTCTCTCAGGAT+CGG | + | chr3.3:63489861-63489880 | None:intergenic | 50.0% | |
| TCACTGTCTCTCTCAGGATC+GGG | + | chr3.3:63489860-63489879 | None:intergenic | 50.0% | |
| TGTGGCTAATGAGAACCCAG+TGG | + | chr3.3:63491513-63491532 | None:intergenic | 50.0% | |
| ! | CTCCCTCCCACCCTTTTTAT+AGG | + | chr3.3:63492111-63492130 | None:intergenic | 50.0% |
| ! | GTGTAAACCAGAGGAAGCGT+CGG | + | chr3.3:63489663-63489682 | None:intergenic | 50.0% |
| !! | GATGGCTTTGACGAAATCGG+CGG | + | chr3.3:63489717-63489736 | None:intergenic | 50.0% |
| TCAGAGCAACCAGCCCAAAG+AGG | + | chr3.3:63489932-63489951 | None:intergenic | 55.0% | |
| ACGGCGTCACTGTCTCTCTC+AGG | + | chr3.3:63489866-63489885 | None:intergenic | 60.0% | |
| GAAAACGCCGACGCTTCCTC+TGG | - | chr3.3:63489653-63489672 | MS.gene35643:CDS | 60.0% | |
| TTTGACGAAATCGGCGGCCG+CGG | + | chr3.3:63489711-63489730 | None:intergenic | 60.0% | |
| ! | AGGCGGCAAACCCTCTGGAA+AGG | + | chr3.3:63493443-63493462 | None:intergenic | 60.0% |
| ! | GGCGGCAAACCCTCTGGAAA+GGG | + | chr3.3:63493442-63493461 | None:intergenic | 60.0% |
| AGAGGAGGCGGCAAACCCTC+TGG | + | chr3.3:63493448-63493467 | None:intergenic | 65.0% | |
| GAGGGTGGTGCCCCCTCATA+AGG | - | chr3.3:63493663-63493682 | MS.gene35643:CDS | 65.0% | |
| TTGACGAAATCGGCGGCCGC+GGG | + | chr3.3:63489710-63489729 | None:intergenic | 65.0% | |
| !! | TATGAGGGGGCACCACCCTC+TGG | + | chr3.3:63493663-63493682 | None:intergenic | 65.0% |
| CGGGCTGACGCATGCGCTCA+AGG | + | chr3.3:63489691-63489710 | None:intergenic | 70.0% | |
| TGAGCGCATGCGTCAGCCCG+CGG | - | chr3.3:63489691-63489710 | MS.gene35643:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 63489650 | 63493683 | 63489650 | ID=MS.gene35643 |
| chr3.3 | mRNA | 63489650 | 63493683 | 63489650 | ID=MS.gene35643.t1;Parent=MS.gene35643 |
| chr3.3 | exon | 63493592 | 63493683 | 63493592 | ID=MS.gene35643.t1.exon1;Parent=MS.gene35643.t1 |
| chr3.3 | CDS | 63493592 | 63493683 | 63493592 | ID=cds.MS.gene35643.t1;Parent=MS.gene35643.t1 |
| chr3.3 | exon | 63493357 | 63493504 | 63493357 | ID=MS.gene35643.t1.exon2;Parent=MS.gene35643.t1 |
| chr3.3 | CDS | 63493357 | 63493504 | 63493357 | ID=cds.MS.gene35643.t1;Parent=MS.gene35643.t1 |
| chr3.3 | exon | 63492439 | 63492609 | 63492439 | ID=MS.gene35643.t1.exon3;Parent=MS.gene35643.t1 |
| chr3.3 | CDS | 63492439 | 63492609 | 63492439 | ID=cds.MS.gene35643.t1;Parent=MS.gene35643.t1 |
| chr3.3 | exon | 63491443 | 63491622 | 63491443 | ID=MS.gene35643.t1.exon4;Parent=MS.gene35643.t1 |
| chr3.3 | CDS | 63491443 | 63491622 | 63491443 | ID=cds.MS.gene35643.t1;Parent=MS.gene35643.t1 |
| chr3.3 | exon | 63489650 | 63490492 | 63489650 | ID=MS.gene35643.t1.exon5;Parent=MS.gene35643.t1 |
| chr3.3 | CDS | 63489650 | 63490492 | 63489650 | ID=cds.MS.gene35643.t1;Parent=MS.gene35643.t1 |
| Gene Sequence |
| Protein sequence |
