Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35664.t1 | XP_003601101.1 | 97.8 | 785 | 16 | 1 | 1 | 784 | 1 | 785 | 0.00E+00 | 1435.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35664.t1 | Q8L751 | 70.4 | 810 | 203 | 5 | 1 | 774 | 1 | 809 | 2.9e-310 | 1065.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35664.t1 | G7J3L8 | 97.8 | 785 | 16 | 1 | 1 | 784 | 1 | 785 | 0.0e+00 | 1435.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene73924 | MS.gene35664 | PPI |
MS.gene031848 | MS.gene35664 | PPI |
MS.gene35664 | MS.gene73924 | PPI |
MS.gene067071 | MS.gene35664 | PPI |
MS.gene35664 | MS.gene053748 | PPI |
MS.gene35664 | MS.gene75538 | PPI |
MS.gene30772 | MS.gene35664 | PPI |
MS.gene35664 | MS.gene045181 | PPI |
MS.gene29058 | MS.gene35664 | PPI |
MS.gene35664 | MS.gene031848 | PPI |
MS.gene94096 | MS.gene35664 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35664.t1 | MTR_3g073040 | 98.601 | 786 | 8 | 3 | 1 | 784 | 1 | 785 | 0.0 | 1606 |
MS.gene35664.t1 | MTR_3g073040 | 98.473 | 786 | 8 | 4 | 1 | 784 | 1 | 784 | 0.0 | 1600 |
MS.gene35664.t1 | MTR_3g073040 | 98.527 | 611 | 6 | 3 | 1 | 609 | 1 | 610 | 0.0 | 1237 |
MS.gene35664.t1 | MTR_5g459350 | 79.647 | 737 | 140 | 3 | 51 | 783 | 28 | 758 | 0.0 | 1123 |
MS.gene35664.t1 | MTR_3g097270 | 66.140 | 759 | 220 | 12 | 27 | 774 | 17 | 749 | 0.0 | 1013 |
MS.gene35664.t1 | MTR_3g086340 | 57.568 | 806 | 302 | 11 | 1 | 770 | 1 | 802 | 0.0 | 904 |
MS.gene35664.t1 | MTR_4g101410 | 53.954 | 784 | 318 | 11 | 1 | 771 | 6 | 759 | 0.0 | 821 |
MS.gene35664.t1 | MTR_3g086340 | 54.854 | 649 | 256 | 8 | 1 | 614 | 1 | 647 | 0.0 | 687 |
MS.gene35664.t1 | MTR_4g101410 | 62.830 | 530 | 192 | 4 | 245 | 771 | 1 | 528 | 0.0 | 673 |
MS.gene35664.t1 | MTR_7g061830 | 33.028 | 436 | 260 | 13 | 344 | 764 | 21 | 439 | 1.81e-50 | 184 |
MS.gene35664.t1 | MTR_4g064110 | 35.501 | 369 | 210 | 13 | 404 | 756 | 71 | 427 | 1.08e-49 | 182 |
MS.gene35664.t1 | MTR_4g115490 | 43.784 | 185 | 24 | 6 | 306 | 487 | 43 | 150 | 5.67e-26 | 108 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35664.t1 | AT4G08180 | 73.490 | 811 | 178 | 7 | 1 | 775 | 1 | 810 | 0.0 | 1175 |
MS.gene35664.t1 | AT4G08180 | 73.490 | 811 | 178 | 7 | 1 | 775 | 1 | 810 | 0.0 | 1175 |
MS.gene35664.t1 | AT4G08180 | 73.366 | 811 | 178 | 8 | 1 | 775 | 1 | 809 | 0.0 | 1168 |
MS.gene35664.t1 | AT4G08180 | 72.996 | 811 | 181 | 8 | 1 | 775 | 1 | 809 | 0.0 | 1162 |
MS.gene35664.t1 | AT2G31020 | 71.644 | 797 | 176 | 11 | 1 | 771 | 1 | 773 | 0.0 | 1091 |
MS.gene35664.t1 | AT1G13170 | 58.540 | 808 | 285 | 13 | 1 | 768 | 1 | 798 | 0.0 | 934 |
MS.gene35664.t1 | AT1G13170 | 57.057 | 829 | 285 | 14 | 1 | 768 | 1 | 819 | 0.0 | 922 |
MS.gene35664.t1 | AT4G22540 | 52.881 | 781 | 298 | 12 | 1 | 778 | 6 | 719 | 0.0 | 814 |
MS.gene35664.t1 | AT4G22540 | 52.881 | 781 | 298 | 12 | 1 | 778 | 6 | 719 | 0.0 | 814 |
MS.gene35664.t1 | AT4G12460 | 55.994 | 709 | 261 | 9 | 72 | 774 | 25 | 688 | 0.0 | 805 |
MS.gene35664.t1 | AT4G12460 | 55.994 | 709 | 261 | 9 | 72 | 774 | 25 | 688 | 0.0 | 805 |
MS.gene35664.t1 | AT4G12460 | 55.915 | 710 | 261 | 10 | 72 | 774 | 25 | 689 | 0.0 | 801 |
MS.gene35664.t1 | AT2G31030 | 79.462 | 409 | 77 | 2 | 363 | 771 | 87 | 488 | 0.0 | 691 |
MS.gene35664.t1 | AT4G12460 | 54.355 | 620 | 232 | 9 | 72 | 685 | 25 | 599 | 0.0 | 671 |
MS.gene35664.t1 | AT4G12460 | 54.267 | 621 | 232 | 10 | 72 | 685 | 25 | 600 | 0.0 | 667 |
MS.gene35664.t1 | AT4G22540 | 59.415 | 547 | 182 | 5 | 233 | 778 | 1 | 508 | 0.0 | 665 |
MS.gene35664.t1 | AT4G22540 | 59.415 | 547 | 182 | 5 | 233 | 778 | 1 | 508 | 0.0 | 665 |
MS.gene35664.t1 | AT4G22540 | 59.415 | 547 | 182 | 5 | 233 | 778 | 1 | 508 | 0.0 | 665 |
MS.gene35664.t1 | AT4G22540 | 59.415 | 547 | 182 | 5 | 233 | 778 | 1 | 508 | 0.0 | 665 |
MS.gene35664.t1 | AT4G12460 | 59.300 | 543 | 177 | 5 | 233 | 774 | 1 | 500 | 0.0 | 664 |
MS.gene35664.t1 | AT4G12460 | 59.300 | 543 | 177 | 5 | 233 | 774 | 1 | 500 | 0.0 | 664 |
MS.gene35664.t1 | AT4G12460 | 59.300 | 543 | 177 | 5 | 233 | 774 | 1 | 500 | 0.0 | 664 |
MS.gene35664.t1 | AT4G12460 | 71.935 | 367 | 94 | 2 | 406 | 772 | 1 | 358 | 0.0 | 578 |
MS.gene35664.t1 | AT1G77730 | 55.924 | 211 | 93 | 0 | 72 | 282 | 51 | 261 | 3.77e-75 | 245 |
MS.gene35664.t1 | AT3G09300 | 37.398 | 369 | 203 | 13 | 404 | 756 | 75 | 431 | 2.01e-54 | 195 |
MS.gene35664.t1 | AT5G02100 | 37.059 | 340 | 198 | 10 | 404 | 737 | 43 | 372 | 9.17e-51 | 184 |
MS.gene35664.t1 | AT5G02100 | 37.059 | 340 | 198 | 10 | 404 | 737 | 70 | 399 | 1.20e-50 | 184 |
MS.gene35664.t1 | AT5G59420 | 35.580 | 371 | 213 | 13 | 402 | 757 | 68 | 427 | 1.62e-48 | 178 |
MS.gene35664.t1 | AT5G02100 | 37.190 | 242 | 144 | 6 | 404 | 642 | 70 | 306 | 2.16e-36 | 140 |
Find 184 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCAACCTTGTTTGGAAAA+TGG | 0.142874 | 3.3:-63255835 | MS.gene35664:CDS |
TCTCAGGTATACTGTATAAA+TGG | 0.156543 | 3.3:-63260966 | MS.gene35664:CDS |
TCCCCAAGTAATGGATTAAA+TGG | 0.201366 | 3.3:+63257000 | None:intergenic |
CTTCAACATTCCACTGTCTT+TGG | 0.212989 | 3.3:+63258160 | None:intergenic |
GACCAACGGTATTTAGAAAA+TGG | 0.224318 | 3.3:-63255302 | MS.gene35664:CDS |
AATTTCCAATAGTGAATTAA+TGG | 0.249195 | 3.3:-63260477 | MS.gene35664:CDS |
AATTCACTATTGGAAATTCT+AGG | 0.249524 | 3.3:+63260482 | None:intergenic |
AAGCATATGAATGGGGAAAA+AGG | 0.258909 | 3.3:-63257293 | MS.gene35664:CDS |
TCAATATACAATCTCATATT+AGG | 0.273272 | 3.3:-63256214 | MS.gene35664:CDS |
GATTCTTCAAATAGATATAT+TGG | 0.289474 | 3.3:-63257516 | MS.gene35664:CDS |
CCGCTATATGGGAGGGTATT+GGG | 0.313081 | 3.3:-63254985 | MS.gene35664:CDS |
CCCTGTCGGTACTTTGACTT+TGG | 0.314261 | 3.3:-63256360 | MS.gene35664:CDS |
ATAGATGATCTGGAGAAATT+TGG | 0.319747 | 3.3:+63254916 | None:intergenic |
AAGCTTTACTGTGATCATTA+TGG | 0.326817 | 3.3:-63256190 | MS.gene35664:CDS |
TTCTCTTTCTCTACAGGGTC+TGG | 0.326994 | 3.3:+63257456 | None:intergenic |
GAAACTAAGAAATCGGCTTC+TGG | 0.327367 | 3.3:-63260423 | MS.gene35664:CDS |
AAAACAGTATCAACCTTGTT+TGG | 0.331476 | 3.3:-63255842 | MS.gene35664:CDS |
AAGCGGGGCATACCGCTATA+TGG | 0.331482 | 3.3:-63254997 | MS.gene35664:CDS |
GCAAAAGTGCTTTGAGGAAA+TGG | 0.335060 | 3.3:-63257337 | MS.gene35664:CDS |
CTCTCTTACTACAAGATTCA+TGG | 0.337848 | 3.3:-63260889 | MS.gene35664:CDS |
TGACACGTTACGCCATTTAG+AGG | 0.339329 | 3.3:-63260288 | MS.gene35664:intron |
AATGATGTAGTACCTCTAAA+TGG | 0.341796 | 3.3:+63260276 | None:intergenic |
AGTGAGTGAAGCGGCTATTC+AGG | 0.343205 | 3.3:-63260393 | MS.gene35664:CDS |
GAAAGCATGCATTATGTTAA+TGG | 0.344980 | 3.3:-63255809 | MS.gene35664:CDS |
GTTAATCATGAAACTGAAAA+AGG | 0.347607 | 3.3:-63260850 | MS.gene35664:CDS |
ATCAACGACCTCGTCGGAAA+TGG | 0.351718 | 3.3:-63260991 | MS.gene35664:CDS |
CAGTGACATGCAACTATCAT+AGG | 0.356777 | 3.3:+63256458 | None:intergenic |
AGGAGCCATTAATTCACTAT+TGG | 0.357424 | 3.3:+63260472 | None:intergenic |
AAGAGAAAGGCGTCAGTCTT+TGG | 0.358167 | 3.3:-63257440 | MS.gene35664:CDS |
ATCAACCTTGTTTGGAAAAT+GGG | 0.366406 | 3.3:-63255834 | MS.gene35664:CDS |
ACGCCTTTCTCTTTCTCTAC+AGG | 0.383813 | 3.3:+63257450 | None:intergenic |
AGAGGCTCATTAAAGTAAAC+AGG | 0.390845 | 3.3:+63257369 | None:intergenic |
ACCGCTATATGGGAGGGTAT+TGG | 0.405483 | 3.3:-63254986 | MS.gene35664:CDS |
GAGGCTAACTATCCAGATAA+AGG | 0.405617 | 3.3:-63256970 | MS.gene35664:CDS |
GACACATGTCCCGACATCTT+TGG | 0.408244 | 3.3:-63254939 | MS.gene35664:CDS |
CAACTGAGAAACTAAGAAAT+CGG | 0.411924 | 3.3:-63260430 | MS.gene35664:CDS |
CGCCTTTCTCTTTCTCTACA+GGG | 0.414276 | 3.3:+63257451 | None:intergenic |
CTGTATAAATGGGTGAATTA+CGG | 0.416373 | 3.3:-63260955 | MS.gene35664:CDS |
AAACCATTTAATCCATTACT+TGG | 0.416940 | 3.3:-63257003 | MS.gene35664:CDS |
AACCATTTAATCCATTACTT+GGG | 0.423282 | 3.3:-63257002 | MS.gene35664:CDS |
ACCAACGGTATTTAGAAAAT+GGG | 0.425568 | 3.3:-63255301 | MS.gene35664:CDS |
TGGTTTGCAAATTCTTCCTT+CGG | 0.428460 | 3.3:+63257020 | None:intergenic |
AGATTCATCGCCGATAACTT+TGG | 0.428593 | 3.3:+63260825 | None:intergenic |
TGAACTTACCCCTGGATTGA+AGG | 0.430474 | 3.3:-63255663 | MS.gene35664:intron |
TAAAACATACCTTGCTCCAC+TGG | 0.436201 | 3.3:+63256315 | None:intergenic |
TCAATGATCAAGGATAATAT+AGG | 0.443105 | 3.3:-63257417 | MS.gene35664:CDS |
ACTTCATCAGATAGATGATC+TGG | 0.448019 | 3.3:+63254906 | None:intergenic |
CAATGATCAAGGATAATATA+GGG | 0.448265 | 3.3:-63257416 | MS.gene35664:CDS |
CTCAGGTATACTGTATAAAT+GGG | 0.449071 | 3.3:-63260965 | MS.gene35664:CDS |
TGCTTGACCAAGCATATGAA+TGG | 0.452390 | 3.3:-63257302 | MS.gene35664:CDS |
CAACATCGTCGAAAACCTTT+CGG | 0.456810 | 3.3:-63260763 | MS.gene35664:CDS |
CTCCCTGCAAAAGTGCTTTG+AGG | 0.458956 | 3.3:-63257343 | MS.gene35664:CDS |
TGGCAAATTCAGAAAAGTTA+CGG | 0.459560 | 3.3:-63255268 | MS.gene35664:CDS |
CTCGTCGGAAATGGAATCTC+AGG | 0.461361 | 3.3:-63260982 | MS.gene35664:CDS |
TTATGGTACGATGCGTATAG+AGG | 0.472592 | 3.3:-63256173 | MS.gene35664:CDS |
ATTCACTATTGGAAATTCTA+GGG | 0.475049 | 3.3:+63260483 | None:intergenic |
TCAGCTTACACGAGTACTCT+TGG | 0.476511 | 3.3:+63256146 | None:intergenic |
CGATGGTTTGTTCTACAAGA+TGG | 0.476587 | 3.3:-63260916 | MS.gene35664:CDS |
GCTTGACCAAGCATATGAAT+GGG | 0.478002 | 3.3:-63257301 | MS.gene35664:CDS |
GCGACGGATGGTGGTGGAGG+AGG | 0.478863 | 3.3:+63261105 | None:intergenic |
TGGAATGTTGAAGATTCCTC+TGG | 0.479208 | 3.3:-63258150 | MS.gene35664:CDS |
TCATATGTTTCCCCAAGTAA+TGG | 0.482582 | 3.3:+63256991 | None:intergenic |
CGGTAGTCAGCGAGAACAGC+CGG | 0.488308 | 3.3:-63261034 | MS.gene35664:CDS |
ACGTTAAATGAACTTACCCC+TGG | 0.489426 | 3.3:-63255671 | MS.gene35664:CDS |
TTGACTTTGGAATTTGATGA+TGG | 0.493794 | 3.3:-63256347 | MS.gene35664:CDS |
GTAGACAGACAAGGTCGATC+TGG | 0.494544 | 3.3:-63258205 | MS.gene35664:intron |
ATGAATCGGAGCTGTCGAAT+CGG | 0.495208 | 3.3:+63261074 | None:intergenic |
GAAATTTGGCCAAAGATGTC+GGG | 0.495648 | 3.3:+63254930 | None:intergenic |
TTCTTTCGCCGCTTAACACG+AGG | 0.499554 | 3.3:+63257483 | None:intergenic |
AAATGGGTGAATTACGGTAA+AGG | 0.499944 | 3.3:-63260949 | MS.gene35664:CDS |
TATTTCCGACCAAGCTTCAC+CGG | 0.500895 | 3.3:-63261163 | MS.gene35664:CDS |
CTCGCTGACTACCGTTGCTA+TGG | 0.503839 | 3.3:+63261043 | None:intergenic |
ATTACTTGGGGAAACATATG+AGG | 0.506400 | 3.3:-63256989 | MS.gene35664:CDS |
ACAGAACAAACCTTCAATCC+AGG | 0.506917 | 3.3:+63255653 | None:intergenic |
AATTGATCGAAATCCTCATC+AGG | 0.508513 | 3.3:-63256104 | MS.gene35664:intron |
CCGCTTAACACGAGGGTGGT+TGG | 0.510239 | 3.3:+63257491 | None:intergenic |
GAGGTTTCACCGGTGAAGCT+TGG | 0.510958 | 3.3:+63261154 | None:intergenic |
AGCGGGGCATACCGCTATAT+GGG | 0.511106 | 3.3:-63254996 | MS.gene35664:CDS |
GAAATTGTTACGTTATCCAC+AGG | 0.511919 | 3.3:+63260452 | None:intergenic |
TCTTCCTTCGGTTGAAGCAT+AGG | 0.512931 | 3.3:+63257032 | None:intergenic |
TCCAAAGTCAAAGTACCGAC+AGG | 0.512970 | 3.3:+63256359 | None:intergenic |
CGAGTGAAGTTATATCTAGT+AGG | 0.513384 | 3.3:+63255704 | None:intergenic |
GCTTGAGCAACGGCAACGGC+AGG | 0.521730 | 3.3:-63255246 | MS.gene35664:intron |
GGAAGATGCAAGAGAGCGGT+TGG | 0.524178 | 3.3:-63255049 | MS.gene35664:CDS |
TCAGCGAGAACAGCCGGCGG+TGG | 0.524826 | 3.3:-63261028 | MS.gene35664:CDS |
AGAAATTTGGCCAAAGATGT+CGG | 0.525441 | 3.3:+63254929 | None:intergenic |
CTCGTGTAAGCTGAAATTCA+AGG | 0.525932 | 3.3:-63256137 | MS.gene35664:CDS |
ACCATTTAATCCATTACTTG+GGG | 0.526714 | 3.3:-63257001 | MS.gene35664:CDS |
CAGTCTTTGGTCAATGATCA+AGG | 0.526816 | 3.3:-63257427 | MS.gene35664:CDS |
TTCATGGTATAGTACAAGAT+AGG | 0.527159 | 3.3:-63255871 | MS.gene35664:CDS |
TGTCAGAGGCTCATCTACTC+TGG | 0.527236 | 3.3:-63255751 | MS.gene35664:CDS |
CTATGGCTGTGACTATGAAT+CGG | 0.529061 | 3.3:+63261060 | None:intergenic |
ACTATCCAGATAAAGGCCTT+CGG | 0.531626 | 3.3:-63256963 | MS.gene35664:CDS |
TGAGGATCGTGTGGCGTGGA+TGG | 0.535282 | 3.3:-63260534 | MS.gene35664:CDS |
GACTACACTGGGAAGGGGAA+AGG | 0.537591 | 3.3:-63255785 | MS.gene35664:CDS |
GGGTGAATTACGGTAAAGGA+TGG | 0.539666 | 3.3:-63260945 | MS.gene35664:CDS |
AGAAATCGGCTTCTGGATGA+AGG | 0.540164 | 3.3:-63260416 | MS.gene35664:CDS |
ACAGCGACGGATGGTGGTGG+AGG | 0.544436 | 3.3:+63261102 | None:intergenic |
TTGATTAACGAACCTTGAGA+TGG | 0.547636 | 3.3:+63260734 | None:intergenic |
GACCCTGTAGAGAAAGAGAA+AGG | 0.552010 | 3.3:-63257453 | MS.gene35664:CDS |
AACGGAGACGGAGGTTTCAC+CGG | 0.553058 | 3.3:+63261144 | None:intergenic |
GGTAAGTTCATTTAACGTGA+TGG | 0.553206 | 3.3:+63255676 | None:intergenic |
GGTCTTAATCTCGAATCTGT+TGG | 0.558979 | 3.3:+63255326 | None:intergenic |
TATGTTAATGGAGACTACAC+TGG | 0.560727 | 3.3:-63255797 | MS.gene35664:CDS |
CAGAAATAAAGCACCTGATG+AGG | 0.562234 | 3.3:+63256091 | None:intergenic |
CTTAATCTCGAATCTGTTGG+TGG | 0.564584 | 3.3:+63255329 | None:intergenic |
GCATGTCACTGTGAGGGTAC+AGG | 0.567627 | 3.3:-63256446 | MS.gene35664:CDS |
TTTCACCGGTGAAGCTTGGT+CGG | 0.567810 | 3.3:+63261158 | None:intergenic |
TAGTGAATTAATGGCTCCTG+TGG | 0.568682 | 3.3:-63260468 | MS.gene35664:CDS |
TGAGAGAAATGATGTTGCAG+AGG | 0.570391 | 3.3:-63257679 | MS.gene35664:CDS |
GCGTAACGTGTCAATGAGGA+TGG | 0.571861 | 3.3:+63260298 | None:intergenic |
TCTGCCTATGCTTCAACCGA+AGG | 0.572194 | 3.3:-63257036 | MS.gene35664:CDS |
AATGGAGACTACACTGGGAA+GGG | 0.575186 | 3.3:-63255791 | MS.gene35664:CDS |
TTTCGGTGAAATCCATCTCA+AGG | 0.575656 | 3.3:-63260746 | MS.gene35664:intron |
CAGAACAAACCTTCAATCCA+GGG | 0.575720 | 3.3:+63255654 | None:intergenic |
AAAAGTTACGGCTTGAGCAA+CGG | 0.579380 | 3.3:-63255256 | MS.gene35664:CDS |
TTTCAAAGGATAAAGCAAGC+GGG | 0.582090 | 3.3:-63255013 | MS.gene35664:CDS |
AGAAAATGGGGAGTATGAGA+TGG | 0.586028 | 3.3:-63255288 | MS.gene35664:CDS |
CTAACAGCGACGGATGGTGG+TGG | 0.587509 | 3.3:+63261099 | None:intergenic |
TATGGTACGATGCGTATAGA+GGG | 0.589761 | 3.3:-63256172 | MS.gene35664:CDS |
ACTTGATGATAGAATATCAC+GGG | 0.594848 | 3.3:+63257620 | None:intergenic |
CTAAAGTCAGTGAACGGAGA+CGG | 0.596230 | 3.3:+63261132 | None:intergenic |
GATCTAACAGCGACGGATGG+TGG | 0.598948 | 3.3:+63261096 | None:intergenic |
TCTACTCTGGAAGCGAAGCA+AGG | 0.599412 | 3.3:-63255738 | MS.gene35664:CDS |
ATGGAGACTACACTGGGAAG+GGG | 0.599481 | 3.3:-63255790 | MS.gene35664:CDS |
TCTTTCGCCGCTTAACACGA+GGG | 0.600507 | 3.3:+63257484 | None:intergenic |
TACGGCTTGAGCAACGGCAA+CGG | 0.601494 | 3.3:-63255250 | MS.gene35664:CDS |
GTTATATCTAGTAGGAAACA+TGG | 0.603267 | 3.3:+63255712 | None:intergenic |
TGAAGCTTGGTCGGAAATAG+CGG | 0.604247 | 3.3:+63261167 | None:intergenic |
TTCAAATCAACAACCACCGC+CGG | 0.607128 | 3.3:+63261015 | None:intergenic |
GGGGCATACCGCTATATGGG+AGG | 0.607716 | 3.3:-63254993 | MS.gene35664:CDS |
AGGAAGTGCAAGTGAATCTG+AGG | 0.611268 | 3.3:-63257709 | MS.gene35664:CDS |
AGTGACATGCAACTATCATA+GGG | 0.611714 | 3.3:+63256459 | None:intergenic |
TCGGATCTAACAGCGACGGA+TGG | 0.614767 | 3.3:+63261093 | None:intergenic |
TTTGGAATTTGATGATGGAG+AGG | 0.615188 | 3.3:-63256342 | MS.gene35664:CDS |
TTGAAGATCAACGACCTCGT+CGG | 0.620325 | 3.3:-63260997 | MS.gene35664:CDS |
TAATGGAGACTACACTGGGA+AGG | 0.620590 | 3.3:-63255792 | MS.gene35664:CDS |
ATAGCGGAGACGCAGCAGAA+AGG | 0.622468 | 3.3:+63261183 | None:intergenic |
TAATGATGCATTTGAATCAG+AGG | 0.622502 | 3.3:-63257547 | MS.gene35664:CDS |
TTCAAAGGATAAAGCAAGCG+GGG | 0.623809 | 3.3:-63255012 | MS.gene35664:CDS |
CCAACCACCCTCGTGTTAAG+CGG | 0.632540 | 3.3:-63257491 | MS.gene35664:CDS |
TCAATTCAGCTTGACCCTGT+CGG | 0.632893 | 3.3:-63256374 | MS.gene35664:CDS |
CCCAATACCCTCCCATATAG+CGG | 0.633388 | 3.3:+63254985 | None:intergenic |
CACGTGAGGATCGTGTGGCG+TGG | 0.635301 | 3.3:-63260538 | MS.gene35664:CDS |
GGCATGCTAAAGTCAGTGAA+CGG | 0.635731 | 3.3:+63261126 | None:intergenic |
GCTCATTAAAGTAAACAGGA+AGG | 0.636659 | 3.3:+63257373 | None:intergenic |
AAGAGAGCGGTTGGAGACCG+CGG | 0.637259 | 3.3:-63255040 | MS.gene35664:CDS |
TTGAGATGGATTTCACCGAA+AGG | 0.638900 | 3.3:+63260748 | None:intergenic |
GTCACTGTGAGGGTACAGGA+TGG | 0.640365 | 3.3:-63256442 | MS.gene35664:CDS |
AGGTCATGAATCTTTGTCAG+AGG | 0.642853 | 3.3:-63255765 | MS.gene35664:CDS |
TTATATCTAGTAGGAAACAT+GGG | 0.644332 | 3.3:+63255713 | None:intergenic |
TTCGCCGCTTAACACGAGGG+TGG | 0.645651 | 3.3:+63257487 | None:intergenic |
TCGGCGATGAATCTATTCGA+AGG | 0.646280 | 3.3:-63260816 | MS.gene35664:CDS |
GTAAAGGATGGAGACCTCGA+TGG | 0.652126 | 3.3:-63260933 | MS.gene35664:CDS |
CCAAAGTCAAAGTACCGACA+GGG | 0.652801 | 3.3:+63256360 | None:intergenic |
CAGGGTCAAGCTGAATTGAG+CGG | 0.654384 | 3.3:+63256378 | None:intergenic |
TTGATGAGAGCCAAAGACAG+TGG | 0.659314 | 3.3:-63258170 | MS.gene35664:CDS |
CTGAGATTCCATTTCCGACG+AGG | 0.660073 | 3.3:+63260983 | None:intergenic |
AGAGCGGTTGGAGACCGCGG+TGG | 0.664558 | 3.3:-63255037 | MS.gene35664:CDS |
AGAGTCACGTGAGGATCGTG+TGG | 0.664779 | 3.3:-63260543 | MS.gene35664:CDS |
CGACATAGAGAATCCTCATG+AGG | 0.667722 | 3.3:+63257073 | None:intergenic |
ATGTTAATGGAGACTACACT+GGG | 0.668878 | 3.3:-63255796 | MS.gene35664:CDS |
GGGCATACCGCTATATGGGA+GGG | 0.672787 | 3.3:-63254992 | MS.gene35664:CDS |
TACATTATTGTAGACAGACA+AGG | 0.673313 | 3.3:-63258214 | MS.gene35664:intron |
CCAACGGTATTTAGAAAATG+GGG | 0.673934 | 3.3:-63255300 | MS.gene35664:CDS |
CTTGACCAAGCATATGAATG+GGG | 0.674611 | 3.3:-63257300 | MS.gene35664:CDS |
GGTATAGTACAAGATAGGAA+CGG | 0.674707 | 3.3:-63255866 | MS.gene35664:CDS |
CGAGATTAAGACCAGACCAA+CGG | 0.676105 | 3.3:-63255316 | MS.gene35664:CDS |
CATAGTCACAGCCATAGCAA+CGG | 0.676128 | 3.3:-63261054 | MS.gene35664:CDS |
AATGGCGTAACGTGTCAATG+AGG | 0.676170 | 3.3:+63260294 | None:intergenic |
GCTCGGAAGATGCAAGAGAG+CGG | 0.683366 | 3.3:-63255053 | MS.gene35664:CDS |
TGCAGGGTGATAGCCTCATG+AGG | 0.684284 | 3.3:-63257086 | MS.gene35664:intron |
CGAATCGGATCTAACAGCGA+CGG | 0.687167 | 3.3:+63261089 | None:intergenic |
TTTGAGAGCAGAGTCACGTG+AGG | 0.696014 | 3.3:-63260552 | MS.gene35664:CDS |
GGATGAAGGAGTGAGTGAAG+CGG | 0.698470 | 3.3:-63260402 | MS.gene35664:CDS |
AGAACAAACCTTCAATCCAG+GGG | 0.698680 | 3.3:+63255655 | None:intergenic |
AAGTCAGTGAACGGAGACGG+AGG | 0.702717 | 3.3:+63261135 | None:intergenic |
AACTTGATGATAGAATATCA+CGG | 0.703821 | 3.3:+63257619 | None:intergenic |
GATAGTTGCATGTCACTGTG+AGG | 0.719382 | 3.3:-63256453 | MS.gene35664:CDS |
ATAGTTGCATGTCACTGTGA+GGG | 0.729407 | 3.3:-63256452 | MS.gene35664:CDS |
CTATATGGGAGGGTATTGGG+AGG | 0.752020 | 3.3:-63254982 | MS.gene35664:CDS |
TCTTGTAGAACAAACCATCG+AGG | 0.774946 | 3.3:+63260919 | None:intergenic |
TAGTCAGCGAGAACAGCCGG+CGG | 0.782686 | 3.3:-63261031 | MS.gene35664:CDS |
TTATCCTTTGAAAACCACCG+CGG | 0.789184 | 3.3:+63255023 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATAAGATAATCATTAT+TGG | + | chr3.3:63260989-63261008 | None:intergenic | 10.0% |
!! | ACTACTAATTTAAAAAATAT+AGG | + | chr3.3:63256415-63256434 | None:intergenic | 10.0% |
!! | CATTATAATTTATTTATTTG+TGG | - | chr3.3:63260710-63260729 | MS.gene35664:intron | 10.0% |
!!! | TTTAGATATTTTATTGATAA+TGG | - | chr3.3:63256334-63256353 | MS.gene35664:CDS | 10.0% |
!! | ATATTAATAATTTCAGATAG+AGG | + | chr3.3:63259573-63259592 | None:intergenic | 15.0% |
!! | ATCATTATTGGAAATTATAA+AGG | + | chr3.3:63260977-63260996 | None:intergenic | 15.0% |
!! | CATGTAAAAGAAATATTAAA+AGG | - | chr3.3:63257198-63257217 | MS.gene35664:intron | 15.0% |
!! | TGAATAATGATTATCTTATA+TGG | - | chr3.3:63260928-63260947 | MS.gene35664:CDS | 15.0% |
!!! | AGAAAAAAAAATGCTTTTAT+CGG | + | chr3.3:63256055-63256074 | None:intergenic | 15.0% |
!!! | ATAATTGCTAATTTTGATTT+CGG | - | chr3.3:63256923-63256942 | MS.gene35664:intron | 15.0% |
!!! | TATTTGTTTTAATGATATTC+AGG | - | chr3.3:63261004-63261023 | MS.gene35664:CDS | 15.0% |
!!! | TTTTCTATTTTTAATTCAGA+AGG | - | chr3.3:63258350-63258369 | MS.gene35664:intron | 15.0% |
!!! | TTTTCTTTTTGTTATTTTTG+AGG | - | chr3.3:63259291-63259310 | MS.gene35664:intron | 15.0% |
!! | AATTTCCAATAGTGAATTAA+TGG | - | chr3.3:63255602-63255621 | MS.gene35664:intron | 20.0% |
!! | ATACATAATCAGTTAAATCA+GGG | + | chr3.3:63257085-63257104 | None:intergenic | 20.0% |
!! | ATATTGATAAACTGTGATTT+AGG | - | chr3.3:63255434-63255453 | MS.gene35664:intron | 20.0% |
!! | ATTACACACTAATTGAATAT+AGG | + | chr3.3:63258256-63258275 | None:intergenic | 20.0% |
!! | ATTTAAAAAATATAGGACAC+CGG | + | chr3.3:63256408-63256427 | None:intergenic | 20.0% |
!! | CAAATATAAACCTTAAAACT+CGG | - | chr3.3:63256611-63256630 | MS.gene35664:intron | 20.0% |
!! | CTTTAATTAGGTATAATAGT+TGG | + | chr3.3:63257455-63257474 | None:intergenic | 20.0% |
!! | GATTCTTCAAATAGATATAT+TGG | - | chr3.3:63258563-63258582 | MS.gene35664:intron | 20.0% |
!! | GTTCTTAAACAAAATATGAT+AGG | + | chr3.3:63256217-63256236 | None:intergenic | 20.0% |
!! | TCAATATACAATCTCATATT+AGG | - | chr3.3:63259865-63259884 | MS.gene35664:intron | 20.0% |
!! | TCTTAAAATCCATATAATTG+TGG | + | chr3.3:63260475-63260494 | None:intergenic | 20.0% |
!! | TTAATGCAAGAAAAATTTAG+TGG | - | chr3.3:63257953-63257972 | MS.gene35664:intron | 20.0% |
!! | TTACACACTAATTGAATATA+GGG | + | chr3.3:63258255-63258274 | None:intergenic | 20.0% |
!! | TTATTTATTTGTGGATACAT+AGG | - | chr3.3:63260719-63260738 | MS.gene35664:intron | 20.0% |
!!! | AACTTAAAAAGCAAATTTTG+GGG | - | chr3.3:63259678-63259697 | MS.gene35664:intron | 20.0% |
!!! | AGCATTTTTTTTTCTTTACT+TGG | - | chr3.3:63256060-63256079 | MS.gene35664:intron | 20.0% |
!!! | ATAATAAACAGTTTTTCACT+AGG | + | chr3.3:63257562-63257581 | None:intergenic | 20.0% |
!!! | ATTTCAAATTAAAGAGCATT+TGG | + | chr3.3:63257116-63257135 | None:intergenic | 20.0% |
!!! | CAACTTAAAAAGCAAATTTT+GGG | - | chr3.3:63259677-63259696 | MS.gene35664:intron | 20.0% |
!!! | CAAGTTCTTTTAAAAGTAAT+GGG | - | chr3.3:63258477-63258496 | MS.gene35664:intron | 20.0% |
!!! | CTATTTAGTTCATGAATAAA+AGG | - | chr3.3:63259456-63259475 | MS.gene35664:intron | 20.0% |
!!! | GAAAAAAAAATGCTTTTATC+GGG | + | chr3.3:63256054-63256073 | None:intergenic | 20.0% |
!!! | GTATATATTTCTTTTTGAGT+GGG | + | chr3.3:63256854-63256873 | None:intergenic | 20.0% |
!!! | GTATGTTTTAATTACTTTAG+TGG | - | chr3.3:63259777-63259796 | MS.gene35664:intron | 20.0% |
!!! | TAATAAACAGTTTTTCACTA+GGG | + | chr3.3:63257561-63257580 | None:intergenic | 20.0% |
!!! | TAGTGGTATGTTTTTTTTAA+TGG | - | chr3.3:63257970-63257989 | MS.gene35664:intron | 20.0% |
!!! | TATATATTTCTTTTTGAGTG+GGG | + | chr3.3:63256853-63256872 | None:intergenic | 20.0% |
!!! | TCAAGTTCTTTTAAAAGTAA+TGG | - | chr3.3:63258476-63258495 | MS.gene35664:intron | 20.0% |
!!! | TGATTAACGATAATTTTATC+AGG | + | chr3.3:63255217-63255236 | None:intergenic | 20.0% |
!!! | TGCGTTGTTTTTATTTATTA+GGG | - | chr3.3:63257013-63257032 | MS.gene35664:CDS | 20.0% |
!!! | TGTATATATTTCTTTTTGAG+TGG | + | chr3.3:63256855-63256874 | None:intergenic | 20.0% |
!!! | TTAACTGGAAGAAAATTTTA+AGG | + | chr3.3:63257407-63257426 | None:intergenic | 20.0% |
!!! | TTAATTTGAAATTGTATGAG+CGG | - | chr3.3:63257124-63257143 | MS.gene35664:intron | 20.0% |
!!! | TTTTTAATGGCTTGTTTATT+AGG | - | chr3.3:63257983-63258002 | MS.gene35664:intron | 20.0% |
! | AAACCATTTAATCCATTACT+TGG | - | chr3.3:63259076-63259095 | MS.gene35664:intron | 25.0% |
! | AACCATTTAATCCATTACTT+GGG | - | chr3.3:63259077-63259096 | MS.gene35664:intron | 25.0% |
! | AACTCCAACTGATTAAAAAA+GGG | + | chr3.3:63258969-63258988 | None:intergenic | 25.0% |
! | AAGACATCACAAAATGTAAT+AGG | + | chr3.3:63260861-63260880 | None:intergenic | 25.0% |
! | AATTCACTATTGGAAATTCT+AGG | + | chr3.3:63255600-63255619 | None:intergenic | 25.0% |
! | ACAGATTATACATTTAACTC+AGG | - | chr3.3:63256737-63256756 | MS.gene35664:intron | 25.0% |
! | AGAAAGAAAAAAAAAAGCAG+GGG | + | chr3.3:63258219-63258238 | None:intergenic | 25.0% |
! | AGACACATATTAATAGATTC+AGG | - | chr3.3:63257489-63257508 | MS.gene35664:CDS | 25.0% |
! | ATCATGGTTACTAATATAGA+TGG | - | chr3.3:63256557-63256576 | MS.gene35664:intron | 25.0% |
! | ATCTTTCTTTCTGATTTCAT+GGG | - | chr3.3:63259226-63259245 | MS.gene35664:intron | 25.0% |
! | ATTCACTATTGGAAATTCTA+GGG | + | chr3.3:63255599-63255618 | None:intergenic | 25.0% |
! | CAATGATCAAGGATAATATA+GGG | - | chr3.3:63258663-63258682 | MS.gene35664:intron | 25.0% |
! | CAGATTATACATTTAACTCA+GGG | - | chr3.3:63256738-63256757 | MS.gene35664:intron | 25.0% |
! | CTGTCTACAATAATGTAATA+CGG | + | chr3.3:63257862-63257881 | None:intergenic | 25.0% |
! | GAACATGATACACTTTAATT+TGG | - | chr3.3:63259517-63259536 | MS.gene35664:intron | 25.0% |
! | GAGAAAGAAAAAAAAAAGCA+GGG | + | chr3.3:63258220-63258239 | None:intergenic | 25.0% |
! | GATACATAATCAGTTAAATC+AGG | + | chr3.3:63257086-63257105 | None:intergenic | 25.0% |
! | GTTAATCATGAAACTGAAAA+AGG | - | chr3.3:63255229-63255248 | MS.gene35664:intron | 25.0% |
! | TAAAGTGTATCATGTTCATA+GGG | + | chr3.3:63259514-63259533 | None:intergenic | 25.0% |
! | TAAGTGTAAAAATCACAGAT+AGG | + | chr3.3:63258321-63258340 | None:intergenic | 25.0% |
! | TACACACTAATTGAATATAG+GGG | + | chr3.3:63258254-63258273 | None:intergenic | 25.0% |
! | TAGTAAGATGACATTCAAAA+AGG | + | chr3.3:63260167-63260186 | None:intergenic | 25.0% |
! | TATCTTTCTTTCTGATTTCA+TGG | - | chr3.3:63259225-63259244 | MS.gene35664:intron | 25.0% |
! | TCAATGATCAAGGATAATAT+AGG | - | chr3.3:63258662-63258681 | MS.gene35664:intron | 25.0% |
! | TGAGAAAGAAAAAAAAAAGC+AGG | + | chr3.3:63258221-63258240 | None:intergenic | 25.0% |
! | TGCCATATTAAGGAAAATAT+GGG | - | chr3.3:63258844-63258863 | MS.gene35664:intron | 25.0% |
! | TTAAAGTGTATCATGTTCAT+AGG | + | chr3.3:63259515-63259534 | None:intergenic | 25.0% |
! | TTATATCTAGTAGGAAACAT+GGG | + | chr3.3:63260369-63260388 | None:intergenic | 25.0% |
! | TTGTCGAAGATACTTTAATT+AGG | + | chr3.3:63257467-63257486 | None:intergenic | 25.0% |
!! | AAATATATATGTATTGGTGC+CGG | - | chr3.3:63256386-63256405 | MS.gene35664:CDS | 25.0% |
!! | AACTATCTTGTTCTTTCTTT+TGG | + | chr3.3:63260627-63260646 | None:intergenic | 25.0% |
!! | AACTTGATGATAGAATATCA+CGG | + | chr3.3:63258463-63258482 | None:intergenic | 25.0% |
!! | ATCAGATGATAAGAGATTTT+CGG | - | chr3.3:63255479-63255498 | MS.gene35664:intron | 25.0% |
!! | CAAATCATTTTCTGTAACAA+AGG | - | chr3.3:63260567-63260586 | MS.gene35664:CDS | 25.0% |
!! | CACAGAAAAGTATATAACAA+CGG | + | chr3.3:63255867-63255886 | None:intergenic | 25.0% |
!! | GCAACTTAAAAAGCAAATTT+TGG | - | chr3.3:63259676-63259695 | MS.gene35664:intron | 25.0% |
!! | TTAACCATTTGTTAACACAA+GGG | + | chr3.3:63258070-63258089 | None:intergenic | 25.0% |
!! | TTTTGAATGTCATCTTACTA+TGG | - | chr3.3:63260167-63260186 | MS.gene35664:intron | 25.0% |
!!! | AACAGTTTTGTTAAACAAGT+TGG | + | chr3.3:63257764-63257783 | None:intergenic | 25.0% |
!!! | ACATATTTGTGTGTTTTTAC+TGG | - | chr3.3:63260522-63260541 | MS.gene35664:CDS | 25.0% |
!!! | ATATATTTCTTTTTGAGTGG+GGG | + | chr3.3:63256852-63256871 | None:intergenic | 25.0% |
!!! | ATTACATTGCTTTTAGCTTT+TGG | - | chr3.3:63256162-63256181 | MS.gene35664:CDS | 25.0% |
!!! | CGAGTTTTAAGGTTTATATT+TGG | + | chr3.3:63256613-63256632 | None:intergenic | 25.0% |
!!! | GCGTTGTTTTTATTTATTAG+GGG | - | chr3.3:63257014-63257033 | MS.gene35664:CDS | 25.0% |
!!! | GTGCGTTGTTTTTATTTATT+AGG | - | chr3.3:63257012-63257031 | MS.gene35664:CDS | 25.0% |
!!! | TCAAATTGACTTTTCTTTTC+AGG | - | chr3.3:63259834-63259853 | MS.gene35664:intron | 25.0% |
!!! | TGAGCAATAATTTTTTCTTG+AGG | + | chr3.3:63256820-63256839 | None:intergenic | 25.0% |
!!! | TGCATGTTGTTTTGTATTAA+GGG | - | chr3.3:63257800-63257819 | MS.gene35664:intron | 25.0% |
!!! | TTCAAACATAGTTGATGAAT+TGG | + | chr3.3:63255376-63255395 | None:intergenic | 25.0% |
!!! | TTGCATGTTGTTTTGTATTA+AGG | - | chr3.3:63257799-63257818 | MS.gene35664:intron | 25.0% |
AAAACAGTATCAACCTTGTT+TGG | - | chr3.3:63260237-63260256 | MS.gene35664:intron | 30.0% | |
AAAATTCTTGTCCTCCATAT+TGG | + | chr3.3:63259426-63259445 | None:intergenic | 30.0% | |
AAATTCTTGTCCTCCATATT+GGG | + | chr3.3:63259425-63259444 | None:intergenic | 30.0% | |
AACATCTACATTAACCTTTC+TGG | + | chr3.3:63258115-63258134 | None:intergenic | 30.0% | |
AACTTGCAAGATACAAATGA+AGG | + | chr3.3:63257525-63257544 | None:intergenic | 30.0% | |
AAGCTTTACTGTGATCATTA+TGG | - | chr3.3:63259889-63259908 | MS.gene35664:intron | 30.0% | |
AATGATGTAGTACCTCTAAA+TGG | + | chr3.3:63255806-63255825 | None:intergenic | 30.0% | |
AATTCCAGGGAAAAAAACTT+AGG | - | chr3.3:63260126-63260145 | MS.gene35664:intron | 30.0% | |
ACCAACGGTATTTAGAAAAT+GGG | - | chr3.3:63260778-63260797 | MS.gene35664:CDS | 30.0% | |
ACCATTTAATCCATTACTTG+GGG | - | chr3.3:63259078-63259097 | MS.gene35664:intron | 30.0% | |
ACTATACCATGAACCTAAAA+TGG | + | chr3.3:63260201-63260220 | None:intergenic | 30.0% | |
ACTGATAATATATTCCTCTC+TGG | - | chr3.3:63260033-63260052 | MS.gene35664:intron | 30.0% | |
ACTTGCAAGATACAAATGAA+GGG | + | chr3.3:63257524-63257543 | None:intergenic | 30.0% | |
ATAGATGATCTGGAGAAATT+TGG | + | chr3.3:63261166-63261185 | None:intergenic | 30.0% | |
CAACTCCAACTGATTAAAAA+AGG | + | chr3.3:63258970-63258989 | None:intergenic | 30.0% | |
CAACTGAGAAACTAAGAAAT+CGG | - | chr3.3:63255649-63255668 | MS.gene35664:intron | 30.0% | |
CTCAGGTATACTGTATAAAT+GGG | - | chr3.3:63255114-63255133 | MS.gene35664:intron | 30.0% | |
CTGCCATATTAAGGAAAATA+TGG | - | chr3.3:63258843-63258862 | MS.gene35664:intron | 30.0% | |
CTGTATAAATGGGTGAATTA+CGG | - | chr3.3:63255124-63255143 | MS.gene35664:intron | 30.0% | |
CTTTAACTGTCAAAACTTTC+TGG | - | chr3.3:63255891-63255910 | MS.gene35664:intron | 30.0% | |
GGTTAATGTAGATGTTTCAT+AGG | - | chr3.3:63258119-63258138 | MS.gene35664:intron | 30.0% | |
GTTATATCTAGTAGGAAACA+TGG | + | chr3.3:63260370-63260389 | None:intergenic | 30.0% | |
TAATATTTATGCTTCCTCTC+AGG | - | chr3.3:63259587-63259606 | MS.gene35664:intron | 30.0% | |
TAATGATGCATTTGAATCAG+AGG | - | chr3.3:63258532-63258551 | MS.gene35664:intron | 30.0% | |
TACATTATTGTAGACAGACA+AGG | - | chr3.3:63257865-63257884 | MS.gene35664:intron | 30.0% | |
TATACAAGTGTCTATAGAGA+AGG | + | chr3.3:63257294-63257313 | None:intergenic | 30.0% | |
TATATTGCTCTGCCATATTA+AGG | - | chr3.3:63258834-63258853 | MS.gene35664:intron | 30.0% | |
TCTCAGGTATACTGTATAAA+TGG | - | chr3.3:63255113-63255132 | MS.gene35664:intron | 30.0% | |
TCTCTATAGACACTTGTATA+AGG | - | chr3.3:63257294-63257313 | MS.gene35664:CDS | 30.0% | |
TCTTTCTTTCTGATTTCATG+GGG | - | chr3.3:63259227-63259246 | MS.gene35664:intron | 30.0% | |
TGAAAATAACACTCGTATAC+TGG | + | chr3.3:63256959-63256978 | None:intergenic | 30.0% | |
TGGCAAATTCAGAAAAGTTA+CGG | - | chr3.3:63260811-63260830 | MS.gene35664:CDS | 30.0% | |
TGTATGCAGAATTTGAATCA+TGG | - | chr3.3:63256541-63256560 | MS.gene35664:intron | 30.0% | |
TTAAATGTATAATCTGTGCC+AGG | + | chr3.3:63256734-63256753 | None:intergenic | 30.0% | |
TTCATGGTATAGTACAAGAT+AGG | - | chr3.3:63260208-63260227 | MS.gene35664:intron | 30.0% | |
! | AATATGGAGGACAAGAATTT+TGG | - | chr3.3:63259425-63259444 | MS.gene35664:intron | 30.0% |
! | ACTTGATGATAGAATATCAC+GGG | + | chr3.3:63258462-63258481 | None:intergenic | 30.0% |
! | ATCAACCTTGTTTGGAAAAT+GGG | - | chr3.3:63260245-63260264 | MS.gene35664:intron | 30.0% |
! | CTTAACCATTTGTTAACACA+AGG | + | chr3.3:63258071-63258090 | None:intergenic | 30.0% |
! | GAAAGCATGCATTATGTTAA+TGG | - | chr3.3:63260270-63260289 | MS.gene35664:intron | 30.0% |
! | TAACCATTTGTTAACACAAG+GGG | + | chr3.3:63258069-63258088 | None:intergenic | 30.0% |
! | TACTAAGAGTGTATTCAAAC+TGG | + | chr3.3:63257174-63257193 | None:intergenic | 30.0% |
! | TAGTCTTCGCATAGTTTTTA+AGG | - | chr3.3:63258040-63258059 | MS.gene35664:intron | 30.0% |
! | TATCAACCTTGTTTGGAAAA+TGG | - | chr3.3:63260244-63260263 | MS.gene35664:intron | 30.0% |
! | TGCCCATATTTTCCTTAATA+TGG | + | chr3.3:63258849-63258868 | None:intergenic | 30.0% |
! | TTGGATCAACTTCTAACTTT+TGG | + | chr3.3:63257352-63257371 | None:intergenic | 30.0% |
! | TTTTCAAAGGATAAAGCAAG+CGG | - | chr3.3:63261065-63261084 | MS.gene35664:CDS | 30.0% |
! | TTTTTCTTGCATTAATCCAG+AGG | + | chr3.3:63257948-63257967 | None:intergenic | 30.0% |
!! | AATCATACAAGAGTATTGCT+TGG | + | chr3.3:63257376-63257395 | None:intergenic | 30.0% |
!! | GTTTTAATGATATTCAGGCT+CGG | - | chr3.3:63261009-63261028 | MS.gene35664:CDS | 30.0% |
!! | TTGACTTTGGAATTTGATGA+TGG | - | chr3.3:63259732-63259751 | MS.gene35664:intron | 30.0% |
!!! | ATTGCTAATTTTGATTTCGG+TGG | - | chr3.3:63256926-63256945 | MS.gene35664:intron | 30.0% |
!!! | TCTTCCCTTTTTTAATCAGT+TGG | - | chr3.3:63258962-63258981 | MS.gene35664:intron | 30.0% |
!!! | TTGCTTTTAGCTTTTGGTAT+AGG | - | chr3.3:63256168-63256187 | MS.gene35664:CDS | 30.0% |
AAAAAAAAGCAGGGGAAGTT+AGG | + | chr3.3:63258211-63258230 | None:intergenic | 35.0% | |
AAAAAAAGCAGGGGAAGTTA+GGG | + | chr3.3:63258210-63258229 | None:intergenic | 35.0% | |
AAAGCACATTCAGACAATAG+TGG | + | chr3.3:63259273-63259292 | None:intergenic | 35.0% | |
AAATGGGTGAATTACGGTAA+AGG | - | chr3.3:63255130-63255149 | MS.gene35664:intron | 35.0% | |
AAGCATATGAATGGGGAAAA+AGG | - | chr3.3:63258786-63258805 | MS.gene35664:intron | 35.0% | |
AAGGAACAATGTTCCCAATA+TGG | - | chr3.3:63259409-63259428 | MS.gene35664:intron | 35.0% | |
AATCTGTGTATTAGAGACAG+TGG | + | chr3.3:63258185-63258204 | None:intergenic | 35.0% | |
AATGATCGGATTACAATTCC+AGG | - | chr3.3:63260112-63260131 | MS.gene35664:intron | 35.0% | |
AATTGATCGAAATCCTCATC+AGG | - | chr3.3:63259975-63259994 | MS.gene35664:intron | 35.0% | |
ACACACTTTGTACCAATGAT+CGG | - | chr3.3:63260098-63260117 | MS.gene35664:intron | 35.0% | |
ACACTAATTGAATATAGGGG+TGG | + | chr3.3:63258251-63258270 | None:intergenic | 35.0% | |
ACTGCATTGAAAGAGCTAAT+AGG | + | chr3.3:63258932-63258951 | None:intergenic | 35.0% | |
ACTTCATCAGATAGATGATC+TGG | + | chr3.3:63261176-63261195 | None:intergenic | 35.0% | |
AGAAATTTGGCCAAAGATGT+CGG | + | chr3.3:63261153-63261172 | None:intergenic | 35.0% | |
AGAGGCTCATTAAAGTAAAC+AGG | + | chr3.3:63258713-63258732 | None:intergenic | 35.0% | |
AGCATATGAATGGGGAAAAA+GGG | - | chr3.3:63258787-63258806 | MS.gene35664:intron | 35.0% | |
AGGAGCCATTAATTCACTAT+TGG | + | chr3.3:63255610-63255629 | None:intergenic | 35.0% | |
AGTGACATGCAACTATCATA+GGG | + | chr3.3:63259623-63259642 | None:intergenic | 35.0% | |
ATAAAACACATACTCCGACA+TGG | + | chr3.3:63256472-63256491 | None:intergenic | 35.0% | |
ATGATCGGATTACAATTCCA+GGG | - | chr3.3:63260113-63260132 | MS.gene35664:intron | 35.0% | |
ATGTAGATGTTTCATAGGTC+TGG | - | chr3.3:63258124-63258143 | MS.gene35664:intron | 35.0% | |
ATGTTAATGGAGACTACACT+GGG | - | chr3.3:63260283-63260302 | MS.gene35664:intron | 35.0% | |
ATTACTTGGGGAAACATATG+AGG | - | chr3.3:63259090-63259109 | MS.gene35664:intron | 35.0% | |
CACAATACGCATAATGAAGA+TGG | + | chr3.3:63260650-63260669 | None:intergenic | 35.0% | |
CACAGATAGGTTATAGCAAT+TGG | + | chr3.3:63258308-63258327 | None:intergenic | 35.0% | |
CCAACGGTATTTAGAAAATG+GGG | - | chr3.3:63260779-63260798 | MS.gene35664:CDS | 35.0% | |
CGAGTGAAGTTATATCTAGT+AGG | + | chr3.3:63260378-63260397 | None:intergenic | 35.0% | |
CTAGTAAAATGCCAAAAACC+CGG | + | chr3.3:63260685-63260704 | None:intergenic | 35.0% | |
CTCTCTTACTACAAGATTCA+TGG | - | chr3.3:63255190-63255209 | MS.gene35664:intron | 35.0% | |
GAAAAAGGCTCCAAAGTTAT+CGG | - | chr3.3:63255244-63255263 | MS.gene35664:intron | 35.0% | |
GAAAAAGGGTAAGTCAGATT+TGG | - | chr3.3:63258801-63258820 | MS.gene35664:intron | 35.0% | |
GAAATTGTTACGTTATCCAC+AGG | + | chr3.3:63255630-63255649 | None:intergenic | 35.0% | |
GACCAACGGTATTTAGAAAA+TGG | - | chr3.3:63260777-63260796 | MS.gene35664:CDS | 35.0% | |
GCTCATTAAAGTAAACAGGA+AGG | + | chr3.3:63258709-63258728 | None:intergenic | 35.0% | |
GGTAAGTTCATTTAACGTGA+TGG | + | chr3.3:63260406-63260425 | None:intergenic | 35.0% | |
GGTATAGTACAAGATAGGAA+CGG | - | chr3.3:63260213-63260232 | MS.gene35664:intron | 35.0% | |
GGTTGTTTGTGTAGAACTAA+TGG | + | chr3.3:63259493-63259512 | None:intergenic | 35.0% | |
GTTACTAATATAGATGGCTC+AGG | - | chr3.3:63256563-63256582 | MS.gene35664:intron | 35.0% | |
TAAAACACATACTCCGACAT+GGG | + | chr3.3:63256471-63256490 | None:intergenic | 35.0% | |
TACCATGAACCTAAAATGGA+AGG | + | chr3.3:63260197-63260216 | None:intergenic | 35.0% | |
TACGTGTTGCCACAATTATA+TGG | - | chr3.3:63260463-63260482 | MS.gene35664:CDS | 35.0% | |
TAGCTCTTTCAATGCAGTAT+TGG | - | chr3.3:63258934-63258953 | MS.gene35664:intron | 35.0% | |
TATGTTAATGGAGACTACAC+TGG | - | chr3.3:63260282-63260301 | MS.gene35664:intron | 35.0% | |
TATTCAAGCCTGAATTCTCA+AGG | + | chr3.3:63260914-63260933 | None:intergenic | 35.0% | |
TATTGTGTGTGTTTGTTTGC+CGG | - | chr3.3:63260663-63260682 | MS.gene35664:intron | 35.0% | |
TCATATGTTTCCCCAAGTAA+TGG | + | chr3.3:63259091-63259110 | None:intergenic | 35.0% | |
TGGAATTGTAATCCGATCAT+TGG | + | chr3.3:63260113-63260132 | None:intergenic | 35.0% | |
TGTGTACACAATCAGTTTCA+TGG | - | chr3.3:63256516-63256535 | MS.gene35664:intron | 35.0% | |
TTGATTAACGAACCTTGAGA+TGG | + | chr3.3:63255348-63255367 | None:intergenic | 35.0% | |
TTGGAAACCATGACAACATT+GGG | + | chr3.3:63257745-63257764 | None:intergenic | 35.0% | |
TTGTAGTACCTTGAGAATTC+AGG | - | chr3.3:63260903-63260922 | MS.gene35664:CDS | 35.0% | |
TTTCAAAGGATAAAGCAAGC+GGG | - | chr3.3:63261066-63261085 | MS.gene35664:CDS | 35.0% | |
TTTCTGATTTCATGGGGTAT+TGG | - | chr3.3:63259233-63259252 | MS.gene35664:intron | 35.0% | |
! | CTGCATTGATGATATGCTTA+CGG | - | chr3.3:63257696-63257715 | MS.gene35664:CDS | 35.0% |
! | CTTTTGGTATAGGAGATAGA+TGG | - | chr3.3:63256178-63256197 | MS.gene35664:CDS | 35.0% |
! | TGGTTTGCAAATTCTTCCTT+CGG | + | chr3.3:63259062-63259081 | None:intergenic | 35.0% |
! | TGTCGGAGTATGTGTTTTAT+AGG | - | chr3.3:63256472-63256491 | MS.gene35664:CDS | 35.0% |
! | TTTCGTACTTCCGAGTTTTA+AGG | + | chr3.3:63256624-63256643 | None:intergenic | 35.0% |
! | TTTTCTAAATACCGTTGGTC+TGG | + | chr3.3:63260777-63260796 | None:intergenic | 35.0% |
! | TTTTTCCCCATTCATATGCT+TGG | + | chr3.3:63258787-63258806 | None:intergenic | 35.0% |
!! | ACTGCTTTAAAACCAAACCA+GGG | + | chr3.3:63259811-63259830 | None:intergenic | 35.0% |
!! | GGTGCTTTATTTCTGTTTCA+TGG | - | chr3.3:63259996-63260015 | MS.gene35664:intron | 35.0% |
!! | TACAAGAGTATTGCTTGGTT+TGG | + | chr3.3:63257371-63257390 | None:intergenic | 35.0% |
!! | TACTGCTTTAAAACCAAACC+AGG | + | chr3.3:63259812-63259831 | None:intergenic | 35.0% |
!! | TCCCCAAGTAATGGATTAAA+TGG | + | chr3.3:63259082-63259101 | None:intergenic | 35.0% |
!! | TTCAGACAATAGTGGATCTA+TGG | + | chr3.3:63259265-63259284 | None:intergenic | 35.0% |
!! | TTTGGAATTTGATGATGGAG+AGG | - | chr3.3:63259737-63259756 | MS.gene35664:intron | 35.0% |
!!! | AACTCTTTTGAAAGTGTCCA+GGG | + | chr3.3:63256091-63256110 | None:intergenic | 35.0% |
!!! | TAACTCTTTTGAAAGTGTCC+AGG | + | chr3.3:63256092-63256111 | None:intergenic | 35.0% |
!!! | TAAGAGATTTTCGGTGTTCA+CGG | - | chr3.3:63255488-63255507 | MS.gene35664:intron | 35.0% |
AAAAAAGCAGGGGAAGTTAG+GGG | + | chr3.3:63258209-63258228 | None:intergenic | 40.0% | |
AAAAACCGAAGGCCTTTATC+TGG | + | chr3.3:63259124-63259143 | None:intergenic | 40.0% | |
AAAAGTTACGGCTTGAGCAA+CGG | - | chr3.3:63260823-63260842 | MS.gene35664:CDS | 40.0% | |
ACAGAACAAACCTTCAATCC+AGG | + | chr3.3:63260429-63260448 | None:intergenic | 40.0% | |
ACAGAAGCGAAGTAGATGTA+AGG | + | chr3.3:63259385-63259404 | None:intergenic | 40.0% | |
ACGTTAAATGAACTTACCCC+TGG | - | chr3.3:63260408-63260427 | MS.gene35664:CDS | 40.0% | |
ACTATCCAGATAAAGGCCTT+CGG | - | chr3.3:63259116-63259135 | MS.gene35664:intron | 40.0% | |
AGAACAAACCTTCAATCCAG+GGG | + | chr3.3:63260427-63260446 | None:intergenic | 40.0% | |
AGAGACACACCTAATCTCAT+AGG | + | chr3.3:63255985-63256004 | None:intergenic | 40.0% | |
AGATTCATCGCCGATAACTT+TGG | + | chr3.3:63255257-63255276 | None:intergenic | 40.0% | |
AGGCTCGAGAAAAAAGAAAC+TGG | - | chr3.3:63261117-63261136 | MS.gene35664:CDS | 40.0% | |
AGGTCATGAATCTTTGTCAG+AGG | - | chr3.3:63260314-63260333 | MS.gene35664:CDS | 40.0% | |
ATAGTTGCATGTCACTGTGA+GGG | - | chr3.3:63259627-63259646 | MS.gene35664:intron | 40.0% | |
ATTGTGTACACAGAATGCAG+TGG | + | chr3.3:63256508-63256527 | None:intergenic | 40.0% | |
ATTGTGTGTGTTTGTTTGCC+GGG | - | chr3.3:63260664-63260683 | MS.gene35664:intron | 40.0% | |
CAACATCGTCGAAAACCTTT+CGG | - | chr3.3:63255316-63255335 | MS.gene35664:CDS | 40.0% | |
CAGAACAAACCTTCAATCCA+GGG | + | chr3.3:63260428-63260447 | None:intergenic | 40.0% | |
CAGTCTTTGGTCAATGATCA+AGG | - | chr3.3:63258652-63258671 | MS.gene35664:intron | 40.0% | |
CAGTGACATGCAACTATCAT+AGG | + | chr3.3:63259624-63259643 | None:intergenic | 40.0% | |
CGTAAGCATATCATCAATGC+AGG | + | chr3.3:63257698-63257717 | None:intergenic | 40.0% | |
CTAATATAGATGGCTCAGGT+AGG | - | chr3.3:63256567-63256586 | MS.gene35664:intron | 40.0% | |
CTACATTATACAAGCCAGAG+AGG | + | chr3.3:63260050-63260069 | None:intergenic | 40.0% | |
CTACTTCGCTTCTGTTTGAA+AGG | - | chr3.3:63259390-63259409 | MS.gene35664:intron | 40.0% | |
CTATGGCTGTGACTATGAAT+CGG | + | chr3.3:63255022-63255041 | None:intergenic | 40.0% | |
CTCGTGTAAGCTGAAATTCA+AGG | - | chr3.3:63259942-63259961 | MS.gene35664:intron | 40.0% | |
CTTAATCTCGAATCTGTTGG+TGG | + | chr3.3:63260753-63260772 | None:intergenic | 40.0% | |
CTTCAACATTCCACTGTCTT+TGG | + | chr3.3:63257922-63257941 | None:intergenic | 40.0% | |
CTTGACCAAGCATATGAATG+GGG | - | chr3.3:63258779-63258798 | MS.gene35664:intron | 40.0% | |
GAAATTTGGCCAAAGATGTC+GGG | + | chr3.3:63261152-63261171 | None:intergenic | 40.0% | |
GAACAATGTTCCCAATATGG+AGG | - | chr3.3:63259412-63259431 | MS.gene35664:intron | 40.0% | |
GAGCAATGATGATCACTGAA+GGG | - | chr3.3:63256121-63256140 | MS.gene35664:CDS | 40.0% | |
GAGGCTAACTATCCAGATAA+AGG | - | chr3.3:63259109-63259128 | MS.gene35664:intron | 40.0% | |
GCATTAGTTGATCAGCTGTA+TGG | + | chr3.3:63257433-63257452 | None:intergenic | 40.0% | |
GCTTGACCAAGCATATGAAT+GGG | - | chr3.3:63258778-63258797 | MS.gene35664:intron | 40.0% | |
GGCTCGAGAAAAAAGAAACT+GGG | - | chr3.3:63261118-63261137 | MS.gene35664:CDS | 40.0% | |
GGTCTTAATCTCGAATCTGT+TGG | + | chr3.3:63260756-63260775 | None:intergenic | 40.0% | |
GTTGGAAACCATGACAACAT+TGG | + | chr3.3:63257746-63257765 | None:intergenic | 40.0% | |
TAAAACATACCTTGCTCCAC+TGG | + | chr3.3:63259767-63259786 | None:intergenic | 40.0% | |
TAGTGAATTAATGGCTCCTG+TGG | - | chr3.3:63255611-63255630 | MS.gene35664:intron | 40.0% | |
TATGGTACGATGCGTATAGA+GGG | - | chr3.3:63259907-63259926 | MS.gene35664:intron | 40.0% | |
TCAGTGCAATATTGTCTGAC+AGG | + | chr3.3:63257585-63257604 | None:intergenic | 40.0% | |
TCATTGGTACAAAGTGTGTG+AGG | + | chr3.3:63260097-63260116 | None:intergenic | 40.0% | |
TCCCTATAAAACTGTAGGCT+CGG | + | chr3.3:63257059-63257078 | None:intergenic | 40.0% | |
TCGGCTCTCGTAGTAAAAAT+AGG | + | chr3.3:63257040-63257059 | None:intergenic | 40.0% | |
TCTTGTAGAACAAACCATCG+AGG | + | chr3.3:63255163-63255182 | None:intergenic | 40.0% | |
TGAATTGCCCAATGTTGTCA+TGG | - | chr3.3:63257735-63257754 | MS.gene35664:intron | 40.0% | |
TGAGAGAAATGATGTTGCAG+AGG | - | chr3.3:63258400-63258419 | MS.gene35664:intron | 40.0% | |
TGCTTGACCAAGCATATGAA+TGG | - | chr3.3:63258777-63258796 | MS.gene35664:intron | 40.0% | |
TGGAATGTTGAAGATTCCTC+TGG | - | chr3.3:63257929-63257948 | MS.gene35664:intron | 40.0% | |
TTATGGTACGATGCGTATAG+AGG | - | chr3.3:63259906-63259925 | MS.gene35664:intron | 40.0% | |
TTCAAAGGATAAAGCAAGCG+GGG | - | chr3.3:63261067-63261086 | MS.gene35664:CDS | 40.0% | |
TTCTTTACTTGGACATTCCC+TGG | - | chr3.3:63256071-63256090 | MS.gene35664:intron | 40.0% | |
TTTCGGTGAAATCCATCTCA+AGG | - | chr3.3:63255333-63255352 | MS.gene35664:CDS | 40.0% | |
! | AACTCGGAAGTACGAAATTG+TGG | - | chr3.3:63256627-63256646 | MS.gene35664:intron | 40.0% |
! | AGAAAATGGGGAGTATGAGA+TGG | - | chr3.3:63260791-63260810 | MS.gene35664:CDS | 40.0% |
! | AGGTTTTCGACGATGTTGAT+AGG | + | chr3.3:63255314-63255333 | None:intergenic | 40.0% |
! | CAGAAATAAAGCACCTGATG+AGG | + | chr3.3:63259991-63260010 | None:intergenic | 40.0% |
! | CAGACAATATTGCACTGATC+AGG | - | chr3.3:63257587-63257606 | MS.gene35664:CDS | 40.0% |
! | CATTAACCTTTCTGGCAATG+CGG | + | chr3.3:63258107-63258126 | None:intergenic | 40.0% |
! | CCCCATTTTCTAAATACCGT+TGG | + | chr3.3:63260782-63260801 | None:intergenic | 40.0% |
! | GAAACTAAGAAATCGGCTTC+TGG | - | chr3.3:63255656-63255675 | MS.gene35664:intron | 40.0% |
! | GGGTACAGGATGGAAATTTT+CGG | - | chr3.3:63259647-63259666 | MS.gene35664:intron | 40.0% |
! | GGTACAGGATGGAAATTTTC+GGG | - | chr3.3:63259648-63259667 | MS.gene35664:intron | 40.0% |
! | GGTTTTCGACGATGTTGATA+GGG | + | chr3.3:63255313-63255332 | None:intergenic | 40.0% |
! | GTACAGGATGGAAATTTTCG+GGG | - | chr3.3:63259649-63259668 | MS.gene35664:intron | 40.0% |
! | TACAGGATGGAAATTTTCGG+GGG | - | chr3.3:63259650-63259669 | MS.gene35664:intron | 40.0% |
! | TATGGCATGCCTTCCATTTT+AGG | - | chr3.3:63260185-63260204 | MS.gene35664:intron | 40.0% |
! | TCAGCTGTATGGCTTTTAAC+TGG | + | chr3.3:63257422-63257441 | None:intergenic | 40.0% |
! | TTATCCTTTGAAAACCACCG+CGG | + | chr3.3:63261059-63261078 | None:intergenic | 40.0% |
! | TTCGTCCCATTTTCCAAACA+AGG | + | chr3.3:63260253-63260272 | None:intergenic | 40.0% |
! | TTGAGATGGATTTCACCGAA+AGG | + | chr3.3:63255334-63255353 | None:intergenic | 40.0% |
!! | AGCCTACAGTTTTATAGGGA+CGG | - | chr3.3:63257059-63257078 | MS.gene35664:CDS | 40.0% |
!! | CGATGGTTTGTTCTACAAGA+TGG | - | chr3.3:63255163-63255182 | MS.gene35664:intron | 40.0% |
!! | GCAAAAGTGCTTTGAGGAAA+TGG | - | chr3.3:63258742-63258761 | MS.gene35664:intron | 40.0% |
!! | TTCCTCAAAGCACTTTTGCA+GGG | + | chr3.3:63258741-63258760 | None:intergenic | 40.0% |
!! | TTTCCTCAAAGCACTTTTGC+AGG | + | chr3.3:63258742-63258761 | None:intergenic | 40.0% |
!!! | AACGCCTAAGTTTTTTTCCC+TGG | + | chr3.3:63260133-63260152 | None:intergenic | 40.0% |
!!! | AAGAGATTTTCGGTGTTCAC+GGG | - | chr3.3:63255489-63255508 | MS.gene35664:intron | 40.0% |
!!! | ATTTCTTTTTGAGTGGGGGT+GGG | + | chr3.3:63256848-63256867 | None:intergenic | 40.0% |
!!! | TATTTCTTTTTGAGTGGGGG+TGG | + | chr3.3:63256849-63256868 | None:intergenic | 40.0% |
!!! | TGCCTTCCATTTTAGGTTCA+TGG | - | chr3.3:63260192-63260211 | MS.gene35664:intron | 40.0% |
AAAAAGCAGGGGAAGTTAGG+GGG | + | chr3.3:63258208-63258227 | None:intergenic | 45.0% | |
AATGGAGACTACACTGGGAA+GGG | - | chr3.3:63260288-63260307 | MS.gene35664:intron | 45.0% | |
AATGGCGTAACGTGTCAATG+AGG | + | chr3.3:63255788-63255807 | None:intergenic | 45.0% | |
ACACGGACACCTATGAGATT+AGG | - | chr3.3:63255973-63255992 | MS.gene35664:intron | 45.0% | |
ACACTTATGTGAGCTATCGG+AGG | + | chr3.3:63256031-63256050 | None:intergenic | 45.0% | |
ACATTTCCGCATTGCCAGAA+AGG | - | chr3.3:63258098-63258117 | MS.gene35664:intron | 45.0% | |
ACGCCTTTCTCTTTCTCTAC+AGG | + | chr3.3:63258632-63258651 | None:intergenic | 45.0% | |
ATAGCAATTGGCTAGCAGGT+AGG | + | chr3.3:63258296-63258315 | None:intergenic | 45.0% | |
ATCAGTTGGAGTTGCTATGC+AGG | - | chr3.3:63258976-63258995 | MS.gene35664:intron | 45.0% | |
ATCGTGTGAGATACCCATGT+CGG | - | chr3.3:63256455-63256474 | MS.gene35664:CDS | 45.0% | |
ATGAATCGGAGCTGTCGAAT+CGG | + | chr3.3:63255008-63255027 | None:intergenic | 45.0% | |
CAGGAGTCATCTTGACTAAC+AGG | - | chr3.3:63257606-63257625 | MS.gene35664:CDS | 45.0% | |
CATAGTCACAGCCATAGCAA+CGG | - | chr3.3:63255025-63255044 | MS.gene35664:CDS | 45.0% | |
CCAGGATTCTGATCAGAACA+TGG | + | chr3.3:63256716-63256735 | None:intergenic | 45.0% | |
CCATGTTCTGATCAGAATCC+TGG | - | chr3.3:63256713-63256732 | MS.gene35664:intron | 45.0% | |
CCTCCCCTTGTGTTAACAAA+TGG | - | chr3.3:63258063-63258082 | MS.gene35664:intron | 45.0% | |
CGACATAGAGAATCCTCATG+AGG | + | chr3.3:63259009-63259028 | None:intergenic | 45.0% | |
CGAGATTAAGACCAGACCAA+CGG | - | chr3.3:63260763-63260782 | MS.gene35664:CDS | 45.0% | |
CGAGCAATGATGATCACTGA+AGG | - | chr3.3:63256120-63256139 | MS.gene35664:CDS | 45.0% | |
CGCCTTTCTCTTTCTCTACA+GGG | + | chr3.3:63258631-63258650 | None:intergenic | 45.0% | |
CTAAAGTCAGTGAACGGAGA+CGG | + | chr3.3:63254950-63254969 | None:intergenic | 45.0% | |
GACCCTGTAGAGAAAGAGAA+AGG | - | chr3.3:63258626-63258645 | MS.gene35664:intron | 45.0% | |
GATAGTTGCATGTCACTGTG+AGG | - | chr3.3:63259626-63259645 | MS.gene35664:intron | 45.0% | |
GGCATGCTAAAGTCAGTGAA+CGG | + | chr3.3:63254956-63254975 | None:intergenic | 45.0% | |
GGGACACTTATGTGAGCTAT+CGG | + | chr3.3:63256034-63256053 | None:intergenic | 45.0% | |
GGGTGAATTACGGTAAAGGA+TGG | - | chr3.3:63255134-63255153 | MS.gene35664:intron | 45.0% | |
GGTTATAGCAATTGGCTAGC+AGG | + | chr3.3:63258300-63258319 | None:intergenic | 45.0% | |
TAATGGAGACTACACTGGGA+AGG | - | chr3.3:63260287-63260306 | MS.gene35664:intron | 45.0% | |
TATTTCCGACCAAGCTTCAC+CGG | - | chr3.3:63254916-63254935 | MS.gene35664:CDS | 45.0% | |
TCAATTCAGCTTGACCCTGT+CGG | - | chr3.3:63259705-63259724 | MS.gene35664:intron | 45.0% | |
TCAGCTTACACGAGTACTCT+TGG | + | chr3.3:63259936-63259955 | None:intergenic | 45.0% | |
TCAGTTGGAGTTGCTATGCA+GGG | - | chr3.3:63258977-63258996 | MS.gene35664:intron | 45.0% | |
TCGGCGATGAATCTATTCGA+AGG | - | chr3.3:63255263-63255282 | MS.gene35664:CDS | 45.0% | |
TCTTCCTTCGGTTGAAGCAT+AGG | + | chr3.3:63259050-63259069 | None:intergenic | 45.0% | |
TCTTTGCACTCCCCAAAGAA+CGG | + | chr3.3:63256764-63256783 | None:intergenic | 45.0% | |
TGAACTTACCCCTGGATTGA+AGG | - | chr3.3:63260416-63260435 | MS.gene35664:CDS | 45.0% | |
TGAAGCTTGGTCGGAAATAG+CGG | + | chr3.3:63254915-63254934 | None:intergenic | 45.0% | |
TGACACGTTACGCCATTTAG+AGG | - | chr3.3:63255791-63255810 | MS.gene35664:CDS | 45.0% | |
TGACTAACAGGTCAAGAGCT+TGG | - | chr3.3:63257618-63257637 | MS.gene35664:CDS | 45.0% | |
TGAGATTAGGTGTGTCTCTG+AGG | - | chr3.3:63255986-63256005 | MS.gene35664:intron | 45.0% | |
TGTGCTAATGCTCGCATCTT+TGG | - | chr3.3:63259356-63259375 | MS.gene35664:intron | 45.0% | |
TTAACTCAGGGCCGTTCTTT+GGG | - | chr3.3:63256750-63256769 | MS.gene35664:intron | 45.0% | |
TTCAAATCAACAACCACCGC+CGG | + | chr3.3:63255067-63255086 | None:intergenic | 45.0% | |
TTCTCTTTCTCTACAGGGTC+TGG | + | chr3.3:63258626-63258645 | None:intergenic | 45.0% | |
TTCTTGAGGCCCATCACTTT+AGG | + | chr3.3:63256806-63256825 | None:intergenic | 45.0% | |
TTGAAGATCAACGACCTCGT+CGG | - | chr3.3:63255082-63255101 | MS.gene35664:intron | 45.0% | |
TTGATGAGAGCCAAAGACAG+TGG | - | chr3.3:63257909-63257928 | MS.gene35664:intron | 45.0% | |
TTTAACTCAGGGCCGTTCTT+TGG | - | chr3.3:63256749-63256768 | MS.gene35664:intron | 45.0% | |
! | AGAAATCGGCTTCTGGATGA+AGG | - | chr3.3:63255663-63255682 | MS.gene35664:intron | 45.0% |
! | AGGAAGTGCAAGTGAATCTG+AGG | - | chr3.3:63258370-63258389 | MS.gene35664:intron | 45.0% |
! | CCATTTGTTAACACAAGGGG+AGG | + | chr3.3:63258066-63258085 | None:intergenic | 45.0% |
! | CCTTCGGTTTTTCTCAGAGA+AGG | - | chr3.3:63259132-63259151 | MS.gene35664:intron | 45.0% |
! | CCTTCTCTGAGAAAAACCGA+AGG | + | chr3.3:63259135-63259154 | None:intergenic | 45.0% |
! | GTGTTTGTTTGCCGGGTTTT+TGG | - | chr3.3:63260671-63260690 | MS.gene35664:intron | 45.0% |
!! | AAGAGAAAGGCGTCAGTCTT+TGG | - | chr3.3:63258639-63258658 | MS.gene35664:intron | 45.0% |
!! | AGCAGTTCCTCTCTGAAACA+CGG | - | chr3.3:63255956-63255975 | MS.gene35664:intron | 45.0% |
!! | AGCCGAGCCTACAGTTTTAT+AGG | - | chr3.3:63257054-63257073 | MS.gene35664:CDS | 45.0% |
!! | ATGATGGAGAGGTTTTCCAG+TGG | - | chr3.3:63259748-63259767 | MS.gene35664:intron | 45.0% |
!! | CCAAAGTCAAAGTACCGACA+GGG | + | chr3.3:63259722-63259741 | None:intergenic | 45.0% |
!! | GCCGAGCCTACAGTTTTATA+GGG | - | chr3.3:63257055-63257074 | MS.gene35664:CDS | 45.0% |
!! | TCCAAAGTCAAAGTACCGAC+AGG | + | chr3.3:63259723-63259742 | None:intergenic | 45.0% |
!!! | TTTCTTTTTGAGTGGGGGTG+GGG | + | chr3.3:63256847-63256866 | None:intergenic | 45.0% |
!! | ATAAATAAATATATATGTAT+TGG | - | chr3.3:63256380-63256399 | MS.gene35664:CDS | 5.0% |
!! | CAAATTAAAATAAATTTATA+GGG | + | chr3.3:63257321-63257340 | None:intergenic | 5.0% |
!! | TCAAATTAAAATAAATTTAT+AGG | + | chr3.3:63257322-63257341 | None:intergenic | 5.0% |
AGATGGCTCAGGTAGGAGTT+TGG | - | chr3.3:63256574-63256593 | MS.gene35664:intron | 50.0% | |
AGTGAGTGAAGCGGCTATTC+AGG | - | chr3.3:63255686-63255705 | MS.gene35664:CDS | 50.0% | |
ATCAACGACCTCGTCGGAAA+TGG | - | chr3.3:63255088-63255107 | MS.gene35664:intron | 50.0% | |
ATGGAGACTACACTGGGAAG+GGG | - | chr3.3:63260289-63260308 | MS.gene35664:CDS | 50.0% | |
CAGGGTCAAGCTGAATTGAG+CGG | + | chr3.3:63259704-63259723 | None:intergenic | 50.0% | |
CCCAATACCCTCCCATATAG+CGG | + | chr3.3:63261097-63261116 | None:intergenic | 50.0% | |
CGAATCGGATCTAACAGCGA+CGG | + | chr3.3:63254993-63255012 | None:intergenic | 50.0% | |
CTCGTCGGAAATGGAATCTC+AGG | - | chr3.3:63255097-63255116 | MS.gene35664:intron | 50.0% | |
CTGAGATTCCATTTCCGACG+AGG | + | chr3.3:63255099-63255118 | None:intergenic | 50.0% | |
GACACATGTCCCGACATCTT+TGG | - | chr3.3:63261140-63261159 | MS.gene35664:CDS | 50.0% | |
GCGTAACGTGTCAATGAGGA+TGG | + | chr3.3:63255784-63255803 | None:intergenic | 50.0% | |
GGATGAAGGAGTGAGTGAAG+CGG | - | chr3.3:63255677-63255696 | MS.gene35664:CDS | 50.0% | |
GGCCGTCCCTATAAAACTGT+AGG | + | chr3.3:63257064-63257083 | None:intergenic | 50.0% | |
GTAAAGGATGGAGACCTCGA+TGG | - | chr3.3:63255146-63255165 | MS.gene35664:intron | 50.0% | |
GTACACAGAATGCAGTGGAG+AGG | + | chr3.3:63256503-63256522 | None:intergenic | 50.0% | |
GTAGACAGACAAGGTCGATC+TGG | - | chr3.3:63257874-63257893 | MS.gene35664:intron | 50.0% | |
TAACTCAGGGCCGTTCTTTG+GGG | - | chr3.3:63256751-63256770 | MS.gene35664:intron | 50.0% | |
TAGGTGTCCGTGTTTCAGAG+AGG | + | chr3.3:63255966-63255985 | None:intergenic | 50.0% | |
TCTGCCTATGCTTCAACCGA+AGG | - | chr3.3:63259043-63259062 | MS.gene35664:intron | 50.0% | |
TCTTTCGCCGCTTAACACGA+GGG | + | chr3.3:63258598-63258617 | None:intergenic | 50.0% | |
TGTCAGAGGCTCATCTACTC+TGG | - | chr3.3:63260328-63260347 | MS.gene35664:CDS | 50.0% | |
TTCTTTCGCCGCTTAACACG+AGG | + | chr3.3:63258599-63258618 | None:intergenic | 50.0% | |
TTGAGGCCCATCACTTTAGG+AGG | + | chr3.3:63256803-63256822 | None:intergenic | 50.0% | |
TTTCACCGGTGAAGCTTGGT+CGG | + | chr3.3:63254924-63254943 | None:intergenic | 50.0% | |
TTTGAGAGCAGAGTCACGTG+AGG | - | chr3.3:63255527-63255546 | MS.gene35664:intron | 50.0% | |
! | ACCGCTATATGGGAGGGTAT+TGG | - | chr3.3:63261093-63261112 | MS.gene35664:CDS | 50.0% |
! | AGAGGTTTTCCAGTGGAGCA+AGG | - | chr3.3:63259755-63259774 | MS.gene35664:intron | 50.0% |
! | CCCTGTCGGTACTTTGACTT+TGG | - | chr3.3:63259719-63259738 | MS.gene35664:intron | 50.0% |
! | TCTACTCTGGAAGCGAAGCA+AGG | - | chr3.3:63260341-63260360 | MS.gene35664:CDS | 50.0% |
!! | CCGCTATATGGGAGGGTATT+GGG | - | chr3.3:63261094-63261113 | MS.gene35664:CDS | 50.0% |
!! | CTATATGGGAGGGTATTGGG+AGG | - | chr3.3:63261097-63261116 | MS.gene35664:CDS | 50.0% |
!! | CTCAAAGCACTTTTGCAGGG+AGG | + | chr3.3:63258738-63258757 | None:intergenic | 50.0% |
!! | CTCCCTGCAAAAGTGCTTTG+AGG | - | chr3.3:63258736-63258755 | MS.gene35664:intron | 50.0% |
AACGGAGACGGAGGTTTCAC+CGG | + | chr3.3:63254938-63254957 | None:intergenic | 55.0% | |
AAGCGGGGCATACCGCTATA+TGG | - | chr3.3:63261082-63261101 | MS.gene35664:CDS | 55.0% | |
AAGTCAGTGAACGGAGACGG+AGG | + | chr3.3:63254947-63254966 | None:intergenic | 55.0% | |
AGAGTCACGTGAGGATCGTG+TGG | - | chr3.3:63255536-63255555 | MS.gene35664:intron | 55.0% | |
AGCGGGGCATACCGCTATAT+GGG | - | chr3.3:63261083-63261102 | MS.gene35664:CDS | 55.0% | |
AGCTGGGCCTCCTAAAGTGA+TGG | - | chr3.3:63256793-63256812 | MS.gene35664:intron | 55.0% | |
AGGGTGATGACTGACCTGAG+AGG | + | chr3.3:63259604-63259623 | None:intergenic | 55.0% | |
CACAGAATGCAGTGGAGAGG+AGG | + | chr3.3:63256500-63256519 | None:intergenic | 55.0% | |
CCAACCACCCTCGTGTTAAG+CGG | - | chr3.3:63258588-63258607 | MS.gene35664:intron | 55.0% | |
CTTTAGTGGCTGTCATGCCC+TGG | - | chr3.3:63259791-63259810 | MS.gene35664:intron | 55.0% | |
GACTACACTGGGAAGGGGAA+AGG | - | chr3.3:63260294-63260313 | MS.gene35664:CDS | 55.0% | |
GAGGTTTCACCGGTGAAGCT+TGG | + | chr3.3:63254928-63254947 | None:intergenic | 55.0% | |
GATCTAACAGCGACGGATGG+TGG | + | chr3.3:63254986-63255005 | None:intergenic | 55.0% | |
GCAAAGAGCTCAACCGAGCT+GGG | - | chr3.3:63256777-63256796 | MS.gene35664:intron | 55.0% | |
GCTCGGAAGATGCAAGAGAG+CGG | - | chr3.3:63261026-63261045 | MS.gene35664:CDS | 55.0% | |
GCTGGGCCTCCTAAAGTGAT+GGG | - | chr3.3:63256794-63256813 | MS.gene35664:intron | 55.0% | |
GGAAGATGCAAGAGAGCGGT+TGG | - | chr3.3:63261030-63261049 | MS.gene35664:CDS | 55.0% | |
GGGCATACCGCTATATGGGA+GGG | - | chr3.3:63261087-63261106 | MS.gene35664:CDS | 55.0% | |
TACGGCTTGAGCAACGGCAA+CGG | - | chr3.3:63260829-63260848 | MS.gene35664:CDS | 55.0% | |
TCGGATCTAACAGCGACGGA+TGG | + | chr3.3:63254989-63255008 | None:intergenic | 55.0% | |
TGCAAAGAGCTCAACCGAGC+TGG | - | chr3.3:63256776-63256795 | MS.gene35664:intron | 55.0% | |
TGCAGGGTGATAGCCTCATG+AGG | - | chr3.3:63258993-63259012 | MS.gene35664:intron | 55.0% | |
! | ATAGCGGAGACGCAGCAGAA+AGG | + | chr3.3:63254899-63254918 | None:intergenic | 55.0% |
! | CACTTTTGCAGGGAGGAGAG+AGG | + | chr3.3:63258731-63258750 | None:intergenic | 55.0% |
! | CTCGCTGACTACCGTTGCTA+TGG | + | chr3.3:63255039-63255058 | None:intergenic | 55.0% |
! | GAGACCGCGGTGGTTTTCAA+AGG | - | chr3.3:63261052-63261071 | MS.gene35664:CDS | 55.0% |
! | GCATGTCACTGTGAGGGTAC+AGG | - | chr3.3:63259633-63259652 | MS.gene35664:intron | 55.0% |
! | GTCACTGTGAGGGTACAGGA+TGG | - | chr3.3:63259637-63259656 | MS.gene35664:intron | 55.0% |
! | TCACTTTAGGAGGCCCAGCT+CGG | + | chr3.3:63256793-63256812 | None:intergenic | 55.0% |
!! | TCTCTGAGGCTGACACTCGT+AGG | - | chr3.3:63256000-63256019 | MS.gene35664:intron | 55.0% |
AAGAGAGCGGTTGGAGACCG+CGG | - | chr3.3:63261039-63261058 | MS.gene35664:CDS | 60.0% | |
CCGCTTAACACGAGGGTGGT+TGG | + | chr3.3:63258591-63258610 | None:intergenic | 60.0% | |
CGGTAGTCAGCGAGAACAGC+CGG | - | chr3.3:63255045-63255064 | MS.gene35664:CDS | 60.0% | |
GGGGCATACCGCTATATGGG+AGG | - | chr3.3:63261086-63261105 | MS.gene35664:CDS | 60.0% | |
GTGGCTGTCATGCCCTGGTT+TGG | - | chr3.3:63259796-63259815 | MS.gene35664:intron | 60.0% | |
TAGTCAGCGAGAACAGCCGG+CGG | - | chr3.3:63255048-63255067 | MS.gene35664:CDS | 60.0% | |
TGAGGATCGTGTGGCGTGGA+TGG | - | chr3.3:63255545-63255564 | MS.gene35664:intron | 60.0% | |
TTCGCCGCTTAACACGAGGG+TGG | + | chr3.3:63258595-63258614 | None:intergenic | 60.0% | |
! | CTAACAGCGACGGATGGTGG+TGG | + | chr3.3:63254983-63255002 | None:intergenic | 60.0% |
CACGTGAGGATCGTGTGGCG+TGG | - | chr3.3:63255541-63255560 | MS.gene35664:intron | 65.0% | |
GCTTGAGCAACGGCAACGGC+AGG | - | chr3.3:63260833-63260852 | MS.gene35664:CDS | 65.0% | |
!! | ACAGCGACGGATGGTGGTGG+AGG | + | chr3.3:63254980-63254999 | None:intergenic | 65.0% |
AGAGCGGTTGGAGACCGCGG+TGG | - | chr3.3:63261042-63261061 | MS.gene35664:CDS | 70.0% | |
TCAGCGAGAACAGCCGGCGG+TGG | - | chr3.3:63255051-63255070 | MS.gene35664:CDS | 70.0% | |
!! | GCGACGGATGGTGGTGGAGG+AGG | + | chr3.3:63254977-63254996 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 63254890 | 63261211 | 63254890 | ID=MS.gene35664 |
chr3.3 | mRNA | 63254890 | 63261211 | 63254890 | ID=MS.gene35664.t1;Parent=MS.gene35664 |
chr3.3 | exon | 63260747 | 63261211 | 63260747 | ID=MS.gene35664.t1.exon1;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63260747 | 63261211 | 63260747 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63260289 | 63260645 | 63260289 | ID=MS.gene35664.t1.exon2;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63260289 | 63260645 | 63260289 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63258127 | 63258223 | 63258127 | ID=MS.gene35664.t1.exon3;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63258127 | 63258223 | 63258127 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63257293 | 63257732 | 63257293 | ID=MS.gene35664.t1.exon4;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63257293 | 63257732 | 63257293 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63256948 | 63257103 | 63256948 | ID=MS.gene35664.t1.exon5;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63256948 | 63257103 | 63256948 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63256325 | 63256492 | 63256325 | ID=MS.gene35664.t1.exon6;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63256325 | 63256492 | 63256325 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63256105 | 63256245 | 63256105 | ID=MS.gene35664.t1.exon7;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63256105 | 63256245 | 63256105 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63255664 | 63255894 | 63255664 | ID=MS.gene35664.t1.exon8;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63255664 | 63255894 | 63255664 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63255247 | 63255360 | 63255247 | ID=MS.gene35664.t1.exon9;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63255247 | 63255360 | 63255247 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
chr3.3 | exon | 63254890 | 63255075 | 63254890 | ID=MS.gene35664.t1.exon10;Parent=MS.gene35664.t1 |
chr3.3 | CDS | 63254890 | 63255075 | 63254890 | ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1 |
Gene Sequence |
Protein sequence |