AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35664


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35664.t1 MTR_3g073040 98.601 786 8 3 1 784 1 785 0.0 1606
MS.gene35664.t1 MTR_3g073040 98.473 786 8 4 1 784 1 784 0.0 1600
MS.gene35664.t1 MTR_3g073040 98.527 611 6 3 1 609 1 610 0.0 1237
MS.gene35664.t1 MTR_5g459350 79.647 737 140 3 51 783 28 758 0.0 1123
MS.gene35664.t1 MTR_3g097270 66.140 759 220 12 27 774 17 749 0.0 1013
MS.gene35664.t1 MTR_3g086340 57.568 806 302 11 1 770 1 802 0.0 904
MS.gene35664.t1 MTR_4g101410 53.954 784 318 11 1 771 6 759 0.0 821
MS.gene35664.t1 MTR_3g086340 54.854 649 256 8 1 614 1 647 0.0 687
MS.gene35664.t1 MTR_4g101410 62.830 530 192 4 245 771 1 528 0.0 673
MS.gene35664.t1 MTR_7g061830 33.028 436 260 13 344 764 21 439 1.81e-50 184
MS.gene35664.t1 MTR_4g064110 35.501 369 210 13 404 756 71 427 1.08e-49 182
MS.gene35664.t1 MTR_4g115490 43.784 185 24 6 306 487 43 150 5.67e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35664.t1 AT4G08180 73.490 811 178 7 1 775 1 810 0.0 1175
MS.gene35664.t1 AT4G08180 73.490 811 178 7 1 775 1 810 0.0 1175
MS.gene35664.t1 AT4G08180 73.366 811 178 8 1 775 1 809 0.0 1168
MS.gene35664.t1 AT4G08180 72.996 811 181 8 1 775 1 809 0.0 1162
MS.gene35664.t1 AT2G31020 71.644 797 176 11 1 771 1 773 0.0 1091
MS.gene35664.t1 AT1G13170 58.540 808 285 13 1 768 1 798 0.0 934
MS.gene35664.t1 AT1G13170 57.057 829 285 14 1 768 1 819 0.0 922
MS.gene35664.t1 AT4G22540 52.881 781 298 12 1 778 6 719 0.0 814
MS.gene35664.t1 AT4G22540 52.881 781 298 12 1 778 6 719 0.0 814
MS.gene35664.t1 AT4G12460 55.994 709 261 9 72 774 25 688 0.0 805
MS.gene35664.t1 AT4G12460 55.994 709 261 9 72 774 25 688 0.0 805
MS.gene35664.t1 AT4G12460 55.915 710 261 10 72 774 25 689 0.0 801
MS.gene35664.t1 AT2G31030 79.462 409 77 2 363 771 87 488 0.0 691
MS.gene35664.t1 AT4G12460 54.355 620 232 9 72 685 25 599 0.0 671
MS.gene35664.t1 AT4G12460 54.267 621 232 10 72 685 25 600 0.0 667
MS.gene35664.t1 AT4G22540 59.415 547 182 5 233 778 1 508 0.0 665
MS.gene35664.t1 AT4G22540 59.415 547 182 5 233 778 1 508 0.0 665
MS.gene35664.t1 AT4G22540 59.415 547 182 5 233 778 1 508 0.0 665
MS.gene35664.t1 AT4G22540 59.415 547 182 5 233 778 1 508 0.0 665
MS.gene35664.t1 AT4G12460 59.300 543 177 5 233 774 1 500 0.0 664
MS.gene35664.t1 AT4G12460 59.300 543 177 5 233 774 1 500 0.0 664
MS.gene35664.t1 AT4G12460 59.300 543 177 5 233 774 1 500 0.0 664
MS.gene35664.t1 AT4G12460 71.935 367 94 2 406 772 1 358 0.0 578
MS.gene35664.t1 AT1G77730 55.924 211 93 0 72 282 51 261 3.77e-75 245
MS.gene35664.t1 AT3G09300 37.398 369 203 13 404 756 75 431 2.01e-54 195
MS.gene35664.t1 AT5G02100 37.059 340 198 10 404 737 43 372 9.17e-51 184
MS.gene35664.t1 AT5G02100 37.059 340 198 10 404 737 70 399 1.20e-50 184
MS.gene35664.t1 AT5G59420 35.580 371 213 13 402 757 68 427 1.62e-48 178
MS.gene35664.t1 AT5G02100 37.190 242 144 6 404 642 70 306 2.16e-36 140

Find 184 sgRNAs with CRISPR-Local

Find 445 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAACCTTGTTTGGAAAA+TGG 0.142874 3.3:-63255835 MS.gene35664:CDS
TCTCAGGTATACTGTATAAA+TGG 0.156543 3.3:-63260966 MS.gene35664:CDS
TCCCCAAGTAATGGATTAAA+TGG 0.201366 3.3:+63257000 None:intergenic
CTTCAACATTCCACTGTCTT+TGG 0.212989 3.3:+63258160 None:intergenic
GACCAACGGTATTTAGAAAA+TGG 0.224318 3.3:-63255302 MS.gene35664:CDS
AATTTCCAATAGTGAATTAA+TGG 0.249195 3.3:-63260477 MS.gene35664:CDS
AATTCACTATTGGAAATTCT+AGG 0.249524 3.3:+63260482 None:intergenic
AAGCATATGAATGGGGAAAA+AGG 0.258909 3.3:-63257293 MS.gene35664:CDS
TCAATATACAATCTCATATT+AGG 0.273272 3.3:-63256214 MS.gene35664:CDS
GATTCTTCAAATAGATATAT+TGG 0.289474 3.3:-63257516 MS.gene35664:CDS
CCGCTATATGGGAGGGTATT+GGG 0.313081 3.3:-63254985 MS.gene35664:CDS
CCCTGTCGGTACTTTGACTT+TGG 0.314261 3.3:-63256360 MS.gene35664:CDS
ATAGATGATCTGGAGAAATT+TGG 0.319747 3.3:+63254916 None:intergenic
AAGCTTTACTGTGATCATTA+TGG 0.326817 3.3:-63256190 MS.gene35664:CDS
TTCTCTTTCTCTACAGGGTC+TGG 0.326994 3.3:+63257456 None:intergenic
GAAACTAAGAAATCGGCTTC+TGG 0.327367 3.3:-63260423 MS.gene35664:CDS
AAAACAGTATCAACCTTGTT+TGG 0.331476 3.3:-63255842 MS.gene35664:CDS
AAGCGGGGCATACCGCTATA+TGG 0.331482 3.3:-63254997 MS.gene35664:CDS
GCAAAAGTGCTTTGAGGAAA+TGG 0.335060 3.3:-63257337 MS.gene35664:CDS
CTCTCTTACTACAAGATTCA+TGG 0.337848 3.3:-63260889 MS.gene35664:CDS
TGACACGTTACGCCATTTAG+AGG 0.339329 3.3:-63260288 MS.gene35664:intron
AATGATGTAGTACCTCTAAA+TGG 0.341796 3.3:+63260276 None:intergenic
AGTGAGTGAAGCGGCTATTC+AGG 0.343205 3.3:-63260393 MS.gene35664:CDS
GAAAGCATGCATTATGTTAA+TGG 0.344980 3.3:-63255809 MS.gene35664:CDS
GTTAATCATGAAACTGAAAA+AGG 0.347607 3.3:-63260850 MS.gene35664:CDS
ATCAACGACCTCGTCGGAAA+TGG 0.351718 3.3:-63260991 MS.gene35664:CDS
CAGTGACATGCAACTATCAT+AGG 0.356777 3.3:+63256458 None:intergenic
AGGAGCCATTAATTCACTAT+TGG 0.357424 3.3:+63260472 None:intergenic
AAGAGAAAGGCGTCAGTCTT+TGG 0.358167 3.3:-63257440 MS.gene35664:CDS
ATCAACCTTGTTTGGAAAAT+GGG 0.366406 3.3:-63255834 MS.gene35664:CDS
ACGCCTTTCTCTTTCTCTAC+AGG 0.383813 3.3:+63257450 None:intergenic
AGAGGCTCATTAAAGTAAAC+AGG 0.390845 3.3:+63257369 None:intergenic
ACCGCTATATGGGAGGGTAT+TGG 0.405483 3.3:-63254986 MS.gene35664:CDS
GAGGCTAACTATCCAGATAA+AGG 0.405617 3.3:-63256970 MS.gene35664:CDS
GACACATGTCCCGACATCTT+TGG 0.408244 3.3:-63254939 MS.gene35664:CDS
CAACTGAGAAACTAAGAAAT+CGG 0.411924 3.3:-63260430 MS.gene35664:CDS
CGCCTTTCTCTTTCTCTACA+GGG 0.414276 3.3:+63257451 None:intergenic
CTGTATAAATGGGTGAATTA+CGG 0.416373 3.3:-63260955 MS.gene35664:CDS
AAACCATTTAATCCATTACT+TGG 0.416940 3.3:-63257003 MS.gene35664:CDS
AACCATTTAATCCATTACTT+GGG 0.423282 3.3:-63257002 MS.gene35664:CDS
ACCAACGGTATTTAGAAAAT+GGG 0.425568 3.3:-63255301 MS.gene35664:CDS
TGGTTTGCAAATTCTTCCTT+CGG 0.428460 3.3:+63257020 None:intergenic
AGATTCATCGCCGATAACTT+TGG 0.428593 3.3:+63260825 None:intergenic
TGAACTTACCCCTGGATTGA+AGG 0.430474 3.3:-63255663 MS.gene35664:intron
TAAAACATACCTTGCTCCAC+TGG 0.436201 3.3:+63256315 None:intergenic
TCAATGATCAAGGATAATAT+AGG 0.443105 3.3:-63257417 MS.gene35664:CDS
ACTTCATCAGATAGATGATC+TGG 0.448019 3.3:+63254906 None:intergenic
CAATGATCAAGGATAATATA+GGG 0.448265 3.3:-63257416 MS.gene35664:CDS
CTCAGGTATACTGTATAAAT+GGG 0.449071 3.3:-63260965 MS.gene35664:CDS
TGCTTGACCAAGCATATGAA+TGG 0.452390 3.3:-63257302 MS.gene35664:CDS
CAACATCGTCGAAAACCTTT+CGG 0.456810 3.3:-63260763 MS.gene35664:CDS
CTCCCTGCAAAAGTGCTTTG+AGG 0.458956 3.3:-63257343 MS.gene35664:CDS
TGGCAAATTCAGAAAAGTTA+CGG 0.459560 3.3:-63255268 MS.gene35664:CDS
CTCGTCGGAAATGGAATCTC+AGG 0.461361 3.3:-63260982 MS.gene35664:CDS
TTATGGTACGATGCGTATAG+AGG 0.472592 3.3:-63256173 MS.gene35664:CDS
ATTCACTATTGGAAATTCTA+GGG 0.475049 3.3:+63260483 None:intergenic
TCAGCTTACACGAGTACTCT+TGG 0.476511 3.3:+63256146 None:intergenic
CGATGGTTTGTTCTACAAGA+TGG 0.476587 3.3:-63260916 MS.gene35664:CDS
GCTTGACCAAGCATATGAAT+GGG 0.478002 3.3:-63257301 MS.gene35664:CDS
GCGACGGATGGTGGTGGAGG+AGG 0.478863 3.3:+63261105 None:intergenic
TGGAATGTTGAAGATTCCTC+TGG 0.479208 3.3:-63258150 MS.gene35664:CDS
TCATATGTTTCCCCAAGTAA+TGG 0.482582 3.3:+63256991 None:intergenic
CGGTAGTCAGCGAGAACAGC+CGG 0.488308 3.3:-63261034 MS.gene35664:CDS
ACGTTAAATGAACTTACCCC+TGG 0.489426 3.3:-63255671 MS.gene35664:CDS
TTGACTTTGGAATTTGATGA+TGG 0.493794 3.3:-63256347 MS.gene35664:CDS
GTAGACAGACAAGGTCGATC+TGG 0.494544 3.3:-63258205 MS.gene35664:intron
ATGAATCGGAGCTGTCGAAT+CGG 0.495208 3.3:+63261074 None:intergenic
GAAATTTGGCCAAAGATGTC+GGG 0.495648 3.3:+63254930 None:intergenic
TTCTTTCGCCGCTTAACACG+AGG 0.499554 3.3:+63257483 None:intergenic
AAATGGGTGAATTACGGTAA+AGG 0.499944 3.3:-63260949 MS.gene35664:CDS
TATTTCCGACCAAGCTTCAC+CGG 0.500895 3.3:-63261163 MS.gene35664:CDS
CTCGCTGACTACCGTTGCTA+TGG 0.503839 3.3:+63261043 None:intergenic
ATTACTTGGGGAAACATATG+AGG 0.506400 3.3:-63256989 MS.gene35664:CDS
ACAGAACAAACCTTCAATCC+AGG 0.506917 3.3:+63255653 None:intergenic
AATTGATCGAAATCCTCATC+AGG 0.508513 3.3:-63256104 MS.gene35664:intron
CCGCTTAACACGAGGGTGGT+TGG 0.510239 3.3:+63257491 None:intergenic
GAGGTTTCACCGGTGAAGCT+TGG 0.510958 3.3:+63261154 None:intergenic
AGCGGGGCATACCGCTATAT+GGG 0.511106 3.3:-63254996 MS.gene35664:CDS
GAAATTGTTACGTTATCCAC+AGG 0.511919 3.3:+63260452 None:intergenic
TCTTCCTTCGGTTGAAGCAT+AGG 0.512931 3.3:+63257032 None:intergenic
TCCAAAGTCAAAGTACCGAC+AGG 0.512970 3.3:+63256359 None:intergenic
CGAGTGAAGTTATATCTAGT+AGG 0.513384 3.3:+63255704 None:intergenic
GCTTGAGCAACGGCAACGGC+AGG 0.521730 3.3:-63255246 MS.gene35664:intron
GGAAGATGCAAGAGAGCGGT+TGG 0.524178 3.3:-63255049 MS.gene35664:CDS
TCAGCGAGAACAGCCGGCGG+TGG 0.524826 3.3:-63261028 MS.gene35664:CDS
AGAAATTTGGCCAAAGATGT+CGG 0.525441 3.3:+63254929 None:intergenic
CTCGTGTAAGCTGAAATTCA+AGG 0.525932 3.3:-63256137 MS.gene35664:CDS
ACCATTTAATCCATTACTTG+GGG 0.526714 3.3:-63257001 MS.gene35664:CDS
CAGTCTTTGGTCAATGATCA+AGG 0.526816 3.3:-63257427 MS.gene35664:CDS
TTCATGGTATAGTACAAGAT+AGG 0.527159 3.3:-63255871 MS.gene35664:CDS
TGTCAGAGGCTCATCTACTC+TGG 0.527236 3.3:-63255751 MS.gene35664:CDS
CTATGGCTGTGACTATGAAT+CGG 0.529061 3.3:+63261060 None:intergenic
ACTATCCAGATAAAGGCCTT+CGG 0.531626 3.3:-63256963 MS.gene35664:CDS
TGAGGATCGTGTGGCGTGGA+TGG 0.535282 3.3:-63260534 MS.gene35664:CDS
GACTACACTGGGAAGGGGAA+AGG 0.537591 3.3:-63255785 MS.gene35664:CDS
GGGTGAATTACGGTAAAGGA+TGG 0.539666 3.3:-63260945 MS.gene35664:CDS
AGAAATCGGCTTCTGGATGA+AGG 0.540164 3.3:-63260416 MS.gene35664:CDS
ACAGCGACGGATGGTGGTGG+AGG 0.544436 3.3:+63261102 None:intergenic
TTGATTAACGAACCTTGAGA+TGG 0.547636 3.3:+63260734 None:intergenic
GACCCTGTAGAGAAAGAGAA+AGG 0.552010 3.3:-63257453 MS.gene35664:CDS
AACGGAGACGGAGGTTTCAC+CGG 0.553058 3.3:+63261144 None:intergenic
GGTAAGTTCATTTAACGTGA+TGG 0.553206 3.3:+63255676 None:intergenic
GGTCTTAATCTCGAATCTGT+TGG 0.558979 3.3:+63255326 None:intergenic
TATGTTAATGGAGACTACAC+TGG 0.560727 3.3:-63255797 MS.gene35664:CDS
CAGAAATAAAGCACCTGATG+AGG 0.562234 3.3:+63256091 None:intergenic
CTTAATCTCGAATCTGTTGG+TGG 0.564584 3.3:+63255329 None:intergenic
GCATGTCACTGTGAGGGTAC+AGG 0.567627 3.3:-63256446 MS.gene35664:CDS
TTTCACCGGTGAAGCTTGGT+CGG 0.567810 3.3:+63261158 None:intergenic
TAGTGAATTAATGGCTCCTG+TGG 0.568682 3.3:-63260468 MS.gene35664:CDS
TGAGAGAAATGATGTTGCAG+AGG 0.570391 3.3:-63257679 MS.gene35664:CDS
GCGTAACGTGTCAATGAGGA+TGG 0.571861 3.3:+63260298 None:intergenic
TCTGCCTATGCTTCAACCGA+AGG 0.572194 3.3:-63257036 MS.gene35664:CDS
AATGGAGACTACACTGGGAA+GGG 0.575186 3.3:-63255791 MS.gene35664:CDS
TTTCGGTGAAATCCATCTCA+AGG 0.575656 3.3:-63260746 MS.gene35664:intron
CAGAACAAACCTTCAATCCA+GGG 0.575720 3.3:+63255654 None:intergenic
AAAAGTTACGGCTTGAGCAA+CGG 0.579380 3.3:-63255256 MS.gene35664:CDS
TTTCAAAGGATAAAGCAAGC+GGG 0.582090 3.3:-63255013 MS.gene35664:CDS
AGAAAATGGGGAGTATGAGA+TGG 0.586028 3.3:-63255288 MS.gene35664:CDS
CTAACAGCGACGGATGGTGG+TGG 0.587509 3.3:+63261099 None:intergenic
TATGGTACGATGCGTATAGA+GGG 0.589761 3.3:-63256172 MS.gene35664:CDS
ACTTGATGATAGAATATCAC+GGG 0.594848 3.3:+63257620 None:intergenic
CTAAAGTCAGTGAACGGAGA+CGG 0.596230 3.3:+63261132 None:intergenic
GATCTAACAGCGACGGATGG+TGG 0.598948 3.3:+63261096 None:intergenic
TCTACTCTGGAAGCGAAGCA+AGG 0.599412 3.3:-63255738 MS.gene35664:CDS
ATGGAGACTACACTGGGAAG+GGG 0.599481 3.3:-63255790 MS.gene35664:CDS
TCTTTCGCCGCTTAACACGA+GGG 0.600507 3.3:+63257484 None:intergenic
TACGGCTTGAGCAACGGCAA+CGG 0.601494 3.3:-63255250 MS.gene35664:CDS
GTTATATCTAGTAGGAAACA+TGG 0.603267 3.3:+63255712 None:intergenic
TGAAGCTTGGTCGGAAATAG+CGG 0.604247 3.3:+63261167 None:intergenic
TTCAAATCAACAACCACCGC+CGG 0.607128 3.3:+63261015 None:intergenic
GGGGCATACCGCTATATGGG+AGG 0.607716 3.3:-63254993 MS.gene35664:CDS
AGGAAGTGCAAGTGAATCTG+AGG 0.611268 3.3:-63257709 MS.gene35664:CDS
AGTGACATGCAACTATCATA+GGG 0.611714 3.3:+63256459 None:intergenic
TCGGATCTAACAGCGACGGA+TGG 0.614767 3.3:+63261093 None:intergenic
TTTGGAATTTGATGATGGAG+AGG 0.615188 3.3:-63256342 MS.gene35664:CDS
TTGAAGATCAACGACCTCGT+CGG 0.620325 3.3:-63260997 MS.gene35664:CDS
TAATGGAGACTACACTGGGA+AGG 0.620590 3.3:-63255792 MS.gene35664:CDS
ATAGCGGAGACGCAGCAGAA+AGG 0.622468 3.3:+63261183 None:intergenic
TAATGATGCATTTGAATCAG+AGG 0.622502 3.3:-63257547 MS.gene35664:CDS
TTCAAAGGATAAAGCAAGCG+GGG 0.623809 3.3:-63255012 MS.gene35664:CDS
CCAACCACCCTCGTGTTAAG+CGG 0.632540 3.3:-63257491 MS.gene35664:CDS
TCAATTCAGCTTGACCCTGT+CGG 0.632893 3.3:-63256374 MS.gene35664:CDS
CCCAATACCCTCCCATATAG+CGG 0.633388 3.3:+63254985 None:intergenic
CACGTGAGGATCGTGTGGCG+TGG 0.635301 3.3:-63260538 MS.gene35664:CDS
GGCATGCTAAAGTCAGTGAA+CGG 0.635731 3.3:+63261126 None:intergenic
GCTCATTAAAGTAAACAGGA+AGG 0.636659 3.3:+63257373 None:intergenic
AAGAGAGCGGTTGGAGACCG+CGG 0.637259 3.3:-63255040 MS.gene35664:CDS
TTGAGATGGATTTCACCGAA+AGG 0.638900 3.3:+63260748 None:intergenic
GTCACTGTGAGGGTACAGGA+TGG 0.640365 3.3:-63256442 MS.gene35664:CDS
AGGTCATGAATCTTTGTCAG+AGG 0.642853 3.3:-63255765 MS.gene35664:CDS
TTATATCTAGTAGGAAACAT+GGG 0.644332 3.3:+63255713 None:intergenic
TTCGCCGCTTAACACGAGGG+TGG 0.645651 3.3:+63257487 None:intergenic
TCGGCGATGAATCTATTCGA+AGG 0.646280 3.3:-63260816 MS.gene35664:CDS
GTAAAGGATGGAGACCTCGA+TGG 0.652126 3.3:-63260933 MS.gene35664:CDS
CCAAAGTCAAAGTACCGACA+GGG 0.652801 3.3:+63256360 None:intergenic
CAGGGTCAAGCTGAATTGAG+CGG 0.654384 3.3:+63256378 None:intergenic
TTGATGAGAGCCAAAGACAG+TGG 0.659314 3.3:-63258170 MS.gene35664:CDS
CTGAGATTCCATTTCCGACG+AGG 0.660073 3.3:+63260983 None:intergenic
AGAGCGGTTGGAGACCGCGG+TGG 0.664558 3.3:-63255037 MS.gene35664:CDS
AGAGTCACGTGAGGATCGTG+TGG 0.664779 3.3:-63260543 MS.gene35664:CDS
CGACATAGAGAATCCTCATG+AGG 0.667722 3.3:+63257073 None:intergenic
ATGTTAATGGAGACTACACT+GGG 0.668878 3.3:-63255796 MS.gene35664:CDS
GGGCATACCGCTATATGGGA+GGG 0.672787 3.3:-63254992 MS.gene35664:CDS
TACATTATTGTAGACAGACA+AGG 0.673313 3.3:-63258214 MS.gene35664:intron
CCAACGGTATTTAGAAAATG+GGG 0.673934 3.3:-63255300 MS.gene35664:CDS
CTTGACCAAGCATATGAATG+GGG 0.674611 3.3:-63257300 MS.gene35664:CDS
GGTATAGTACAAGATAGGAA+CGG 0.674707 3.3:-63255866 MS.gene35664:CDS
CGAGATTAAGACCAGACCAA+CGG 0.676105 3.3:-63255316 MS.gene35664:CDS
CATAGTCACAGCCATAGCAA+CGG 0.676128 3.3:-63261054 MS.gene35664:CDS
AATGGCGTAACGTGTCAATG+AGG 0.676170 3.3:+63260294 None:intergenic
GCTCGGAAGATGCAAGAGAG+CGG 0.683366 3.3:-63255053 MS.gene35664:CDS
TGCAGGGTGATAGCCTCATG+AGG 0.684284 3.3:-63257086 MS.gene35664:intron
CGAATCGGATCTAACAGCGA+CGG 0.687167 3.3:+63261089 None:intergenic
TTTGAGAGCAGAGTCACGTG+AGG 0.696014 3.3:-63260552 MS.gene35664:CDS
GGATGAAGGAGTGAGTGAAG+CGG 0.698470 3.3:-63260402 MS.gene35664:CDS
AGAACAAACCTTCAATCCAG+GGG 0.698680 3.3:+63255655 None:intergenic
AAGTCAGTGAACGGAGACGG+AGG 0.702717 3.3:+63261135 None:intergenic
AACTTGATGATAGAATATCA+CGG 0.703821 3.3:+63257619 None:intergenic
GATAGTTGCATGTCACTGTG+AGG 0.719382 3.3:-63256453 MS.gene35664:CDS
ATAGTTGCATGTCACTGTGA+GGG 0.729407 3.3:-63256452 MS.gene35664:CDS
CTATATGGGAGGGTATTGGG+AGG 0.752020 3.3:-63254982 MS.gene35664:CDS
TCTTGTAGAACAAACCATCG+AGG 0.774946 3.3:+63260919 None:intergenic
TAGTCAGCGAGAACAGCCGG+CGG 0.782686 3.3:-63261031 MS.gene35664:CDS
TTATCCTTTGAAAACCACCG+CGG 0.789184 3.3:+63255023 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAGATAATCATTAT+TGG + chr3.3:63260989-63261008 None:intergenic 10.0%
!! ACTACTAATTTAAAAAATAT+AGG + chr3.3:63256415-63256434 None:intergenic 10.0%
!! CATTATAATTTATTTATTTG+TGG - chr3.3:63260710-63260729 MS.gene35664:intron 10.0%
!!! TTTAGATATTTTATTGATAA+TGG - chr3.3:63256334-63256353 MS.gene35664:CDS 10.0%
!! ATATTAATAATTTCAGATAG+AGG + chr3.3:63259573-63259592 None:intergenic 15.0%
!! ATCATTATTGGAAATTATAA+AGG + chr3.3:63260977-63260996 None:intergenic 15.0%
!! CATGTAAAAGAAATATTAAA+AGG - chr3.3:63257198-63257217 MS.gene35664:intron 15.0%
!! TGAATAATGATTATCTTATA+TGG - chr3.3:63260928-63260947 MS.gene35664:CDS 15.0%
!!! AGAAAAAAAAATGCTTTTAT+CGG + chr3.3:63256055-63256074 None:intergenic 15.0%
!!! ATAATTGCTAATTTTGATTT+CGG - chr3.3:63256923-63256942 MS.gene35664:intron 15.0%
!!! TATTTGTTTTAATGATATTC+AGG - chr3.3:63261004-63261023 MS.gene35664:CDS 15.0%
!!! TTTTCTATTTTTAATTCAGA+AGG - chr3.3:63258350-63258369 MS.gene35664:intron 15.0%
!!! TTTTCTTTTTGTTATTTTTG+AGG - chr3.3:63259291-63259310 MS.gene35664:intron 15.0%
!! AATTTCCAATAGTGAATTAA+TGG - chr3.3:63255602-63255621 MS.gene35664:intron 20.0%
!! ATACATAATCAGTTAAATCA+GGG + chr3.3:63257085-63257104 None:intergenic 20.0%
!! ATATTGATAAACTGTGATTT+AGG - chr3.3:63255434-63255453 MS.gene35664:intron 20.0%
!! ATTACACACTAATTGAATAT+AGG + chr3.3:63258256-63258275 None:intergenic 20.0%
!! ATTTAAAAAATATAGGACAC+CGG + chr3.3:63256408-63256427 None:intergenic 20.0%
!! CAAATATAAACCTTAAAACT+CGG - chr3.3:63256611-63256630 MS.gene35664:intron 20.0%
!! CTTTAATTAGGTATAATAGT+TGG + chr3.3:63257455-63257474 None:intergenic 20.0%
!! GATTCTTCAAATAGATATAT+TGG - chr3.3:63258563-63258582 MS.gene35664:intron 20.0%
!! GTTCTTAAACAAAATATGAT+AGG + chr3.3:63256217-63256236 None:intergenic 20.0%
!! TCAATATACAATCTCATATT+AGG - chr3.3:63259865-63259884 MS.gene35664:intron 20.0%
!! TCTTAAAATCCATATAATTG+TGG + chr3.3:63260475-63260494 None:intergenic 20.0%
!! TTAATGCAAGAAAAATTTAG+TGG - chr3.3:63257953-63257972 MS.gene35664:intron 20.0%
!! TTACACACTAATTGAATATA+GGG + chr3.3:63258255-63258274 None:intergenic 20.0%
!! TTATTTATTTGTGGATACAT+AGG - chr3.3:63260719-63260738 MS.gene35664:intron 20.0%
!!! AACTTAAAAAGCAAATTTTG+GGG - chr3.3:63259678-63259697 MS.gene35664:intron 20.0%
!!! AGCATTTTTTTTTCTTTACT+TGG - chr3.3:63256060-63256079 MS.gene35664:intron 20.0%
!!! ATAATAAACAGTTTTTCACT+AGG + chr3.3:63257562-63257581 None:intergenic 20.0%
!!! ATTTCAAATTAAAGAGCATT+TGG + chr3.3:63257116-63257135 None:intergenic 20.0%
!!! CAACTTAAAAAGCAAATTTT+GGG - chr3.3:63259677-63259696 MS.gene35664:intron 20.0%
!!! CAAGTTCTTTTAAAAGTAAT+GGG - chr3.3:63258477-63258496 MS.gene35664:intron 20.0%
!!! CTATTTAGTTCATGAATAAA+AGG - chr3.3:63259456-63259475 MS.gene35664:intron 20.0%
!!! GAAAAAAAAATGCTTTTATC+GGG + chr3.3:63256054-63256073 None:intergenic 20.0%
!!! GTATATATTTCTTTTTGAGT+GGG + chr3.3:63256854-63256873 None:intergenic 20.0%
!!! GTATGTTTTAATTACTTTAG+TGG - chr3.3:63259777-63259796 MS.gene35664:intron 20.0%
!!! TAATAAACAGTTTTTCACTA+GGG + chr3.3:63257561-63257580 None:intergenic 20.0%
!!! TAGTGGTATGTTTTTTTTAA+TGG - chr3.3:63257970-63257989 MS.gene35664:intron 20.0%
!!! TATATATTTCTTTTTGAGTG+GGG + chr3.3:63256853-63256872 None:intergenic 20.0%
!!! TCAAGTTCTTTTAAAAGTAA+TGG - chr3.3:63258476-63258495 MS.gene35664:intron 20.0%
!!! TGATTAACGATAATTTTATC+AGG + chr3.3:63255217-63255236 None:intergenic 20.0%
!!! TGCGTTGTTTTTATTTATTA+GGG - chr3.3:63257013-63257032 MS.gene35664:CDS 20.0%
!!! TGTATATATTTCTTTTTGAG+TGG + chr3.3:63256855-63256874 None:intergenic 20.0%
!!! TTAACTGGAAGAAAATTTTA+AGG + chr3.3:63257407-63257426 None:intergenic 20.0%
!!! TTAATTTGAAATTGTATGAG+CGG - chr3.3:63257124-63257143 MS.gene35664:intron 20.0%
!!! TTTTTAATGGCTTGTTTATT+AGG - chr3.3:63257983-63258002 MS.gene35664:intron 20.0%
! AAACCATTTAATCCATTACT+TGG - chr3.3:63259076-63259095 MS.gene35664:intron 25.0%
! AACCATTTAATCCATTACTT+GGG - chr3.3:63259077-63259096 MS.gene35664:intron 25.0%
! AACTCCAACTGATTAAAAAA+GGG + chr3.3:63258969-63258988 None:intergenic 25.0%
! AAGACATCACAAAATGTAAT+AGG + chr3.3:63260861-63260880 None:intergenic 25.0%
! AATTCACTATTGGAAATTCT+AGG + chr3.3:63255600-63255619 None:intergenic 25.0%
! ACAGATTATACATTTAACTC+AGG - chr3.3:63256737-63256756 MS.gene35664:intron 25.0%
! AGAAAGAAAAAAAAAAGCAG+GGG + chr3.3:63258219-63258238 None:intergenic 25.0%
! AGACACATATTAATAGATTC+AGG - chr3.3:63257489-63257508 MS.gene35664:CDS 25.0%
! ATCATGGTTACTAATATAGA+TGG - chr3.3:63256557-63256576 MS.gene35664:intron 25.0%
! ATCTTTCTTTCTGATTTCAT+GGG - chr3.3:63259226-63259245 MS.gene35664:intron 25.0%
! ATTCACTATTGGAAATTCTA+GGG + chr3.3:63255599-63255618 None:intergenic 25.0%
! CAATGATCAAGGATAATATA+GGG - chr3.3:63258663-63258682 MS.gene35664:intron 25.0%
! CAGATTATACATTTAACTCA+GGG - chr3.3:63256738-63256757 MS.gene35664:intron 25.0%
! CTGTCTACAATAATGTAATA+CGG + chr3.3:63257862-63257881 None:intergenic 25.0%
! GAACATGATACACTTTAATT+TGG - chr3.3:63259517-63259536 MS.gene35664:intron 25.0%
! GAGAAAGAAAAAAAAAAGCA+GGG + chr3.3:63258220-63258239 None:intergenic 25.0%
! GATACATAATCAGTTAAATC+AGG + chr3.3:63257086-63257105 None:intergenic 25.0%
! GTTAATCATGAAACTGAAAA+AGG - chr3.3:63255229-63255248 MS.gene35664:intron 25.0%
! TAAAGTGTATCATGTTCATA+GGG + chr3.3:63259514-63259533 None:intergenic 25.0%
! TAAGTGTAAAAATCACAGAT+AGG + chr3.3:63258321-63258340 None:intergenic 25.0%
! TACACACTAATTGAATATAG+GGG + chr3.3:63258254-63258273 None:intergenic 25.0%
! TAGTAAGATGACATTCAAAA+AGG + chr3.3:63260167-63260186 None:intergenic 25.0%
! TATCTTTCTTTCTGATTTCA+TGG - chr3.3:63259225-63259244 MS.gene35664:intron 25.0%
! TCAATGATCAAGGATAATAT+AGG - chr3.3:63258662-63258681 MS.gene35664:intron 25.0%
! TGAGAAAGAAAAAAAAAAGC+AGG + chr3.3:63258221-63258240 None:intergenic 25.0%
! TGCCATATTAAGGAAAATAT+GGG - chr3.3:63258844-63258863 MS.gene35664:intron 25.0%
! TTAAAGTGTATCATGTTCAT+AGG + chr3.3:63259515-63259534 None:intergenic 25.0%
! TTATATCTAGTAGGAAACAT+GGG + chr3.3:63260369-63260388 None:intergenic 25.0%
! TTGTCGAAGATACTTTAATT+AGG + chr3.3:63257467-63257486 None:intergenic 25.0%
!! AAATATATATGTATTGGTGC+CGG - chr3.3:63256386-63256405 MS.gene35664:CDS 25.0%
!! AACTATCTTGTTCTTTCTTT+TGG + chr3.3:63260627-63260646 None:intergenic 25.0%
!! AACTTGATGATAGAATATCA+CGG + chr3.3:63258463-63258482 None:intergenic 25.0%
!! ATCAGATGATAAGAGATTTT+CGG - chr3.3:63255479-63255498 MS.gene35664:intron 25.0%
!! CAAATCATTTTCTGTAACAA+AGG - chr3.3:63260567-63260586 MS.gene35664:CDS 25.0%
!! CACAGAAAAGTATATAACAA+CGG + chr3.3:63255867-63255886 None:intergenic 25.0%
!! GCAACTTAAAAAGCAAATTT+TGG - chr3.3:63259676-63259695 MS.gene35664:intron 25.0%
!! TTAACCATTTGTTAACACAA+GGG + chr3.3:63258070-63258089 None:intergenic 25.0%
!! TTTTGAATGTCATCTTACTA+TGG - chr3.3:63260167-63260186 MS.gene35664:intron 25.0%
!!! AACAGTTTTGTTAAACAAGT+TGG + chr3.3:63257764-63257783 None:intergenic 25.0%
!!! ACATATTTGTGTGTTTTTAC+TGG - chr3.3:63260522-63260541 MS.gene35664:CDS 25.0%
!!! ATATATTTCTTTTTGAGTGG+GGG + chr3.3:63256852-63256871 None:intergenic 25.0%
!!! ATTACATTGCTTTTAGCTTT+TGG - chr3.3:63256162-63256181 MS.gene35664:CDS 25.0%
!!! CGAGTTTTAAGGTTTATATT+TGG + chr3.3:63256613-63256632 None:intergenic 25.0%
!!! GCGTTGTTTTTATTTATTAG+GGG - chr3.3:63257014-63257033 MS.gene35664:CDS 25.0%
!!! GTGCGTTGTTTTTATTTATT+AGG - chr3.3:63257012-63257031 MS.gene35664:CDS 25.0%
!!! TCAAATTGACTTTTCTTTTC+AGG - chr3.3:63259834-63259853 MS.gene35664:intron 25.0%
!!! TGAGCAATAATTTTTTCTTG+AGG + chr3.3:63256820-63256839 None:intergenic 25.0%
!!! TGCATGTTGTTTTGTATTAA+GGG - chr3.3:63257800-63257819 MS.gene35664:intron 25.0%
!!! TTCAAACATAGTTGATGAAT+TGG + chr3.3:63255376-63255395 None:intergenic 25.0%
!!! TTGCATGTTGTTTTGTATTA+AGG - chr3.3:63257799-63257818 MS.gene35664:intron 25.0%
AAAACAGTATCAACCTTGTT+TGG - chr3.3:63260237-63260256 MS.gene35664:intron 30.0%
AAAATTCTTGTCCTCCATAT+TGG + chr3.3:63259426-63259445 None:intergenic 30.0%
AAATTCTTGTCCTCCATATT+GGG + chr3.3:63259425-63259444 None:intergenic 30.0%
AACATCTACATTAACCTTTC+TGG + chr3.3:63258115-63258134 None:intergenic 30.0%
AACTTGCAAGATACAAATGA+AGG + chr3.3:63257525-63257544 None:intergenic 30.0%
AAGCTTTACTGTGATCATTA+TGG - chr3.3:63259889-63259908 MS.gene35664:intron 30.0%
AATGATGTAGTACCTCTAAA+TGG + chr3.3:63255806-63255825 None:intergenic 30.0%
AATTCCAGGGAAAAAAACTT+AGG - chr3.3:63260126-63260145 MS.gene35664:intron 30.0%
ACCAACGGTATTTAGAAAAT+GGG - chr3.3:63260778-63260797 MS.gene35664:CDS 30.0%
ACCATTTAATCCATTACTTG+GGG - chr3.3:63259078-63259097 MS.gene35664:intron 30.0%
ACTATACCATGAACCTAAAA+TGG + chr3.3:63260201-63260220 None:intergenic 30.0%
ACTGATAATATATTCCTCTC+TGG - chr3.3:63260033-63260052 MS.gene35664:intron 30.0%
ACTTGCAAGATACAAATGAA+GGG + chr3.3:63257524-63257543 None:intergenic 30.0%
ATAGATGATCTGGAGAAATT+TGG + chr3.3:63261166-63261185 None:intergenic 30.0%
CAACTCCAACTGATTAAAAA+AGG + chr3.3:63258970-63258989 None:intergenic 30.0%
CAACTGAGAAACTAAGAAAT+CGG - chr3.3:63255649-63255668 MS.gene35664:intron 30.0%
CTCAGGTATACTGTATAAAT+GGG - chr3.3:63255114-63255133 MS.gene35664:intron 30.0%
CTGCCATATTAAGGAAAATA+TGG - chr3.3:63258843-63258862 MS.gene35664:intron 30.0%
CTGTATAAATGGGTGAATTA+CGG - chr3.3:63255124-63255143 MS.gene35664:intron 30.0%
CTTTAACTGTCAAAACTTTC+TGG - chr3.3:63255891-63255910 MS.gene35664:intron 30.0%
GGTTAATGTAGATGTTTCAT+AGG - chr3.3:63258119-63258138 MS.gene35664:intron 30.0%
GTTATATCTAGTAGGAAACA+TGG + chr3.3:63260370-63260389 None:intergenic 30.0%
TAATATTTATGCTTCCTCTC+AGG - chr3.3:63259587-63259606 MS.gene35664:intron 30.0%
TAATGATGCATTTGAATCAG+AGG - chr3.3:63258532-63258551 MS.gene35664:intron 30.0%
TACATTATTGTAGACAGACA+AGG - chr3.3:63257865-63257884 MS.gene35664:intron 30.0%
TATACAAGTGTCTATAGAGA+AGG + chr3.3:63257294-63257313 None:intergenic 30.0%
TATATTGCTCTGCCATATTA+AGG - chr3.3:63258834-63258853 MS.gene35664:intron 30.0%
TCTCAGGTATACTGTATAAA+TGG - chr3.3:63255113-63255132 MS.gene35664:intron 30.0%
TCTCTATAGACACTTGTATA+AGG - chr3.3:63257294-63257313 MS.gene35664:CDS 30.0%
TCTTTCTTTCTGATTTCATG+GGG - chr3.3:63259227-63259246 MS.gene35664:intron 30.0%
TGAAAATAACACTCGTATAC+TGG + chr3.3:63256959-63256978 None:intergenic 30.0%
TGGCAAATTCAGAAAAGTTA+CGG - chr3.3:63260811-63260830 MS.gene35664:CDS 30.0%
TGTATGCAGAATTTGAATCA+TGG - chr3.3:63256541-63256560 MS.gene35664:intron 30.0%
TTAAATGTATAATCTGTGCC+AGG + chr3.3:63256734-63256753 None:intergenic 30.0%
TTCATGGTATAGTACAAGAT+AGG - chr3.3:63260208-63260227 MS.gene35664:intron 30.0%
! AATATGGAGGACAAGAATTT+TGG - chr3.3:63259425-63259444 MS.gene35664:intron 30.0%
! ACTTGATGATAGAATATCAC+GGG + chr3.3:63258462-63258481 None:intergenic 30.0%
! ATCAACCTTGTTTGGAAAAT+GGG - chr3.3:63260245-63260264 MS.gene35664:intron 30.0%
! CTTAACCATTTGTTAACACA+AGG + chr3.3:63258071-63258090 None:intergenic 30.0%
! GAAAGCATGCATTATGTTAA+TGG - chr3.3:63260270-63260289 MS.gene35664:intron 30.0%
! TAACCATTTGTTAACACAAG+GGG + chr3.3:63258069-63258088 None:intergenic 30.0%
! TACTAAGAGTGTATTCAAAC+TGG + chr3.3:63257174-63257193 None:intergenic 30.0%
! TAGTCTTCGCATAGTTTTTA+AGG - chr3.3:63258040-63258059 MS.gene35664:intron 30.0%
! TATCAACCTTGTTTGGAAAA+TGG - chr3.3:63260244-63260263 MS.gene35664:intron 30.0%
! TGCCCATATTTTCCTTAATA+TGG + chr3.3:63258849-63258868 None:intergenic 30.0%
! TTGGATCAACTTCTAACTTT+TGG + chr3.3:63257352-63257371 None:intergenic 30.0%
! TTTTCAAAGGATAAAGCAAG+CGG - chr3.3:63261065-63261084 MS.gene35664:CDS 30.0%
! TTTTTCTTGCATTAATCCAG+AGG + chr3.3:63257948-63257967 None:intergenic 30.0%
!! AATCATACAAGAGTATTGCT+TGG + chr3.3:63257376-63257395 None:intergenic 30.0%
!! GTTTTAATGATATTCAGGCT+CGG - chr3.3:63261009-63261028 MS.gene35664:CDS 30.0%
!! TTGACTTTGGAATTTGATGA+TGG - chr3.3:63259732-63259751 MS.gene35664:intron 30.0%
!!! ATTGCTAATTTTGATTTCGG+TGG - chr3.3:63256926-63256945 MS.gene35664:intron 30.0%
!!! TCTTCCCTTTTTTAATCAGT+TGG - chr3.3:63258962-63258981 MS.gene35664:intron 30.0%
!!! TTGCTTTTAGCTTTTGGTAT+AGG - chr3.3:63256168-63256187 MS.gene35664:CDS 30.0%
AAAAAAAAGCAGGGGAAGTT+AGG + chr3.3:63258211-63258230 None:intergenic 35.0%
AAAAAAAGCAGGGGAAGTTA+GGG + chr3.3:63258210-63258229 None:intergenic 35.0%
AAAGCACATTCAGACAATAG+TGG + chr3.3:63259273-63259292 None:intergenic 35.0%
AAATGGGTGAATTACGGTAA+AGG - chr3.3:63255130-63255149 MS.gene35664:intron 35.0%
AAGCATATGAATGGGGAAAA+AGG - chr3.3:63258786-63258805 MS.gene35664:intron 35.0%
AAGGAACAATGTTCCCAATA+TGG - chr3.3:63259409-63259428 MS.gene35664:intron 35.0%
AATCTGTGTATTAGAGACAG+TGG + chr3.3:63258185-63258204 None:intergenic 35.0%
AATGATCGGATTACAATTCC+AGG - chr3.3:63260112-63260131 MS.gene35664:intron 35.0%
AATTGATCGAAATCCTCATC+AGG - chr3.3:63259975-63259994 MS.gene35664:intron 35.0%
ACACACTTTGTACCAATGAT+CGG - chr3.3:63260098-63260117 MS.gene35664:intron 35.0%
ACACTAATTGAATATAGGGG+TGG + chr3.3:63258251-63258270 None:intergenic 35.0%
ACTGCATTGAAAGAGCTAAT+AGG + chr3.3:63258932-63258951 None:intergenic 35.0%
ACTTCATCAGATAGATGATC+TGG + chr3.3:63261176-63261195 None:intergenic 35.0%
AGAAATTTGGCCAAAGATGT+CGG + chr3.3:63261153-63261172 None:intergenic 35.0%
AGAGGCTCATTAAAGTAAAC+AGG + chr3.3:63258713-63258732 None:intergenic 35.0%
AGCATATGAATGGGGAAAAA+GGG - chr3.3:63258787-63258806 MS.gene35664:intron 35.0%
AGGAGCCATTAATTCACTAT+TGG + chr3.3:63255610-63255629 None:intergenic 35.0%
AGTGACATGCAACTATCATA+GGG + chr3.3:63259623-63259642 None:intergenic 35.0%
ATAAAACACATACTCCGACA+TGG + chr3.3:63256472-63256491 None:intergenic 35.0%
ATGATCGGATTACAATTCCA+GGG - chr3.3:63260113-63260132 MS.gene35664:intron 35.0%
ATGTAGATGTTTCATAGGTC+TGG - chr3.3:63258124-63258143 MS.gene35664:intron 35.0%
ATGTTAATGGAGACTACACT+GGG - chr3.3:63260283-63260302 MS.gene35664:intron 35.0%
ATTACTTGGGGAAACATATG+AGG - chr3.3:63259090-63259109 MS.gene35664:intron 35.0%
CACAATACGCATAATGAAGA+TGG + chr3.3:63260650-63260669 None:intergenic 35.0%
CACAGATAGGTTATAGCAAT+TGG + chr3.3:63258308-63258327 None:intergenic 35.0%
CCAACGGTATTTAGAAAATG+GGG - chr3.3:63260779-63260798 MS.gene35664:CDS 35.0%
CGAGTGAAGTTATATCTAGT+AGG + chr3.3:63260378-63260397 None:intergenic 35.0%
CTAGTAAAATGCCAAAAACC+CGG + chr3.3:63260685-63260704 None:intergenic 35.0%
CTCTCTTACTACAAGATTCA+TGG - chr3.3:63255190-63255209 MS.gene35664:intron 35.0%
GAAAAAGGCTCCAAAGTTAT+CGG - chr3.3:63255244-63255263 MS.gene35664:intron 35.0%
GAAAAAGGGTAAGTCAGATT+TGG - chr3.3:63258801-63258820 MS.gene35664:intron 35.0%
GAAATTGTTACGTTATCCAC+AGG + chr3.3:63255630-63255649 None:intergenic 35.0%
GACCAACGGTATTTAGAAAA+TGG - chr3.3:63260777-63260796 MS.gene35664:CDS 35.0%
GCTCATTAAAGTAAACAGGA+AGG + chr3.3:63258709-63258728 None:intergenic 35.0%
GGTAAGTTCATTTAACGTGA+TGG + chr3.3:63260406-63260425 None:intergenic 35.0%
GGTATAGTACAAGATAGGAA+CGG - chr3.3:63260213-63260232 MS.gene35664:intron 35.0%
GGTTGTTTGTGTAGAACTAA+TGG + chr3.3:63259493-63259512 None:intergenic 35.0%
GTTACTAATATAGATGGCTC+AGG - chr3.3:63256563-63256582 MS.gene35664:intron 35.0%
TAAAACACATACTCCGACAT+GGG + chr3.3:63256471-63256490 None:intergenic 35.0%
TACCATGAACCTAAAATGGA+AGG + chr3.3:63260197-63260216 None:intergenic 35.0%
TACGTGTTGCCACAATTATA+TGG - chr3.3:63260463-63260482 MS.gene35664:CDS 35.0%
TAGCTCTTTCAATGCAGTAT+TGG - chr3.3:63258934-63258953 MS.gene35664:intron 35.0%
TATGTTAATGGAGACTACAC+TGG - chr3.3:63260282-63260301 MS.gene35664:intron 35.0%
TATTCAAGCCTGAATTCTCA+AGG + chr3.3:63260914-63260933 None:intergenic 35.0%
TATTGTGTGTGTTTGTTTGC+CGG - chr3.3:63260663-63260682 MS.gene35664:intron 35.0%
TCATATGTTTCCCCAAGTAA+TGG + chr3.3:63259091-63259110 None:intergenic 35.0%
TGGAATTGTAATCCGATCAT+TGG + chr3.3:63260113-63260132 None:intergenic 35.0%
TGTGTACACAATCAGTTTCA+TGG - chr3.3:63256516-63256535 MS.gene35664:intron 35.0%
TTGATTAACGAACCTTGAGA+TGG + chr3.3:63255348-63255367 None:intergenic 35.0%
TTGGAAACCATGACAACATT+GGG + chr3.3:63257745-63257764 None:intergenic 35.0%
TTGTAGTACCTTGAGAATTC+AGG - chr3.3:63260903-63260922 MS.gene35664:CDS 35.0%
TTTCAAAGGATAAAGCAAGC+GGG - chr3.3:63261066-63261085 MS.gene35664:CDS 35.0%
TTTCTGATTTCATGGGGTAT+TGG - chr3.3:63259233-63259252 MS.gene35664:intron 35.0%
! CTGCATTGATGATATGCTTA+CGG - chr3.3:63257696-63257715 MS.gene35664:CDS 35.0%
! CTTTTGGTATAGGAGATAGA+TGG - chr3.3:63256178-63256197 MS.gene35664:CDS 35.0%
! TGGTTTGCAAATTCTTCCTT+CGG + chr3.3:63259062-63259081 None:intergenic 35.0%
! TGTCGGAGTATGTGTTTTAT+AGG - chr3.3:63256472-63256491 MS.gene35664:CDS 35.0%
! TTTCGTACTTCCGAGTTTTA+AGG + chr3.3:63256624-63256643 None:intergenic 35.0%
! TTTTCTAAATACCGTTGGTC+TGG + chr3.3:63260777-63260796 None:intergenic 35.0%
! TTTTTCCCCATTCATATGCT+TGG + chr3.3:63258787-63258806 None:intergenic 35.0%
!! ACTGCTTTAAAACCAAACCA+GGG + chr3.3:63259811-63259830 None:intergenic 35.0%
!! GGTGCTTTATTTCTGTTTCA+TGG - chr3.3:63259996-63260015 MS.gene35664:intron 35.0%
!! TACAAGAGTATTGCTTGGTT+TGG + chr3.3:63257371-63257390 None:intergenic 35.0%
!! TACTGCTTTAAAACCAAACC+AGG + chr3.3:63259812-63259831 None:intergenic 35.0%
!! TCCCCAAGTAATGGATTAAA+TGG + chr3.3:63259082-63259101 None:intergenic 35.0%
!! TTCAGACAATAGTGGATCTA+TGG + chr3.3:63259265-63259284 None:intergenic 35.0%
!! TTTGGAATTTGATGATGGAG+AGG - chr3.3:63259737-63259756 MS.gene35664:intron 35.0%
!!! AACTCTTTTGAAAGTGTCCA+GGG + chr3.3:63256091-63256110 None:intergenic 35.0%
!!! TAACTCTTTTGAAAGTGTCC+AGG + chr3.3:63256092-63256111 None:intergenic 35.0%
!!! TAAGAGATTTTCGGTGTTCA+CGG - chr3.3:63255488-63255507 MS.gene35664:intron 35.0%
AAAAAAGCAGGGGAAGTTAG+GGG + chr3.3:63258209-63258228 None:intergenic 40.0%
AAAAACCGAAGGCCTTTATC+TGG + chr3.3:63259124-63259143 None:intergenic 40.0%
AAAAGTTACGGCTTGAGCAA+CGG - chr3.3:63260823-63260842 MS.gene35664:CDS 40.0%
ACAGAACAAACCTTCAATCC+AGG + chr3.3:63260429-63260448 None:intergenic 40.0%
ACAGAAGCGAAGTAGATGTA+AGG + chr3.3:63259385-63259404 None:intergenic 40.0%
ACGTTAAATGAACTTACCCC+TGG - chr3.3:63260408-63260427 MS.gene35664:CDS 40.0%
ACTATCCAGATAAAGGCCTT+CGG - chr3.3:63259116-63259135 MS.gene35664:intron 40.0%
AGAACAAACCTTCAATCCAG+GGG + chr3.3:63260427-63260446 None:intergenic 40.0%
AGAGACACACCTAATCTCAT+AGG + chr3.3:63255985-63256004 None:intergenic 40.0%
AGATTCATCGCCGATAACTT+TGG + chr3.3:63255257-63255276 None:intergenic 40.0%
AGGCTCGAGAAAAAAGAAAC+TGG - chr3.3:63261117-63261136 MS.gene35664:CDS 40.0%
AGGTCATGAATCTTTGTCAG+AGG - chr3.3:63260314-63260333 MS.gene35664:CDS 40.0%
ATAGTTGCATGTCACTGTGA+GGG - chr3.3:63259627-63259646 MS.gene35664:intron 40.0%
ATTGTGTACACAGAATGCAG+TGG + chr3.3:63256508-63256527 None:intergenic 40.0%
ATTGTGTGTGTTTGTTTGCC+GGG - chr3.3:63260664-63260683 MS.gene35664:intron 40.0%
CAACATCGTCGAAAACCTTT+CGG - chr3.3:63255316-63255335 MS.gene35664:CDS 40.0%
CAGAACAAACCTTCAATCCA+GGG + chr3.3:63260428-63260447 None:intergenic 40.0%
CAGTCTTTGGTCAATGATCA+AGG - chr3.3:63258652-63258671 MS.gene35664:intron 40.0%
CAGTGACATGCAACTATCAT+AGG + chr3.3:63259624-63259643 None:intergenic 40.0%
CGTAAGCATATCATCAATGC+AGG + chr3.3:63257698-63257717 None:intergenic 40.0%
CTAATATAGATGGCTCAGGT+AGG - chr3.3:63256567-63256586 MS.gene35664:intron 40.0%
CTACATTATACAAGCCAGAG+AGG + chr3.3:63260050-63260069 None:intergenic 40.0%
CTACTTCGCTTCTGTTTGAA+AGG - chr3.3:63259390-63259409 MS.gene35664:intron 40.0%
CTATGGCTGTGACTATGAAT+CGG + chr3.3:63255022-63255041 None:intergenic 40.0%
CTCGTGTAAGCTGAAATTCA+AGG - chr3.3:63259942-63259961 MS.gene35664:intron 40.0%
CTTAATCTCGAATCTGTTGG+TGG + chr3.3:63260753-63260772 None:intergenic 40.0%
CTTCAACATTCCACTGTCTT+TGG + chr3.3:63257922-63257941 None:intergenic 40.0%
CTTGACCAAGCATATGAATG+GGG - chr3.3:63258779-63258798 MS.gene35664:intron 40.0%
GAAATTTGGCCAAAGATGTC+GGG + chr3.3:63261152-63261171 None:intergenic 40.0%
GAACAATGTTCCCAATATGG+AGG - chr3.3:63259412-63259431 MS.gene35664:intron 40.0%
GAGCAATGATGATCACTGAA+GGG - chr3.3:63256121-63256140 MS.gene35664:CDS 40.0%
GAGGCTAACTATCCAGATAA+AGG - chr3.3:63259109-63259128 MS.gene35664:intron 40.0%
GCATTAGTTGATCAGCTGTA+TGG + chr3.3:63257433-63257452 None:intergenic 40.0%
GCTTGACCAAGCATATGAAT+GGG - chr3.3:63258778-63258797 MS.gene35664:intron 40.0%
GGCTCGAGAAAAAAGAAACT+GGG - chr3.3:63261118-63261137 MS.gene35664:CDS 40.0%
GGTCTTAATCTCGAATCTGT+TGG + chr3.3:63260756-63260775 None:intergenic 40.0%
GTTGGAAACCATGACAACAT+TGG + chr3.3:63257746-63257765 None:intergenic 40.0%
TAAAACATACCTTGCTCCAC+TGG + chr3.3:63259767-63259786 None:intergenic 40.0%
TAGTGAATTAATGGCTCCTG+TGG - chr3.3:63255611-63255630 MS.gene35664:intron 40.0%
TATGGTACGATGCGTATAGA+GGG - chr3.3:63259907-63259926 MS.gene35664:intron 40.0%
TCAGTGCAATATTGTCTGAC+AGG + chr3.3:63257585-63257604 None:intergenic 40.0%
TCATTGGTACAAAGTGTGTG+AGG + chr3.3:63260097-63260116 None:intergenic 40.0%
TCCCTATAAAACTGTAGGCT+CGG + chr3.3:63257059-63257078 None:intergenic 40.0%
TCGGCTCTCGTAGTAAAAAT+AGG + chr3.3:63257040-63257059 None:intergenic 40.0%
TCTTGTAGAACAAACCATCG+AGG + chr3.3:63255163-63255182 None:intergenic 40.0%
TGAATTGCCCAATGTTGTCA+TGG - chr3.3:63257735-63257754 MS.gene35664:intron 40.0%
TGAGAGAAATGATGTTGCAG+AGG - chr3.3:63258400-63258419 MS.gene35664:intron 40.0%
TGCTTGACCAAGCATATGAA+TGG - chr3.3:63258777-63258796 MS.gene35664:intron 40.0%
TGGAATGTTGAAGATTCCTC+TGG - chr3.3:63257929-63257948 MS.gene35664:intron 40.0%
TTATGGTACGATGCGTATAG+AGG - chr3.3:63259906-63259925 MS.gene35664:intron 40.0%
TTCAAAGGATAAAGCAAGCG+GGG - chr3.3:63261067-63261086 MS.gene35664:CDS 40.0%
TTCTTTACTTGGACATTCCC+TGG - chr3.3:63256071-63256090 MS.gene35664:intron 40.0%
TTTCGGTGAAATCCATCTCA+AGG - chr3.3:63255333-63255352 MS.gene35664:CDS 40.0%
! AACTCGGAAGTACGAAATTG+TGG - chr3.3:63256627-63256646 MS.gene35664:intron 40.0%
! AGAAAATGGGGAGTATGAGA+TGG - chr3.3:63260791-63260810 MS.gene35664:CDS 40.0%
! AGGTTTTCGACGATGTTGAT+AGG + chr3.3:63255314-63255333 None:intergenic 40.0%
! CAGAAATAAAGCACCTGATG+AGG + chr3.3:63259991-63260010 None:intergenic 40.0%
! CAGACAATATTGCACTGATC+AGG - chr3.3:63257587-63257606 MS.gene35664:CDS 40.0%
! CATTAACCTTTCTGGCAATG+CGG + chr3.3:63258107-63258126 None:intergenic 40.0%
! CCCCATTTTCTAAATACCGT+TGG + chr3.3:63260782-63260801 None:intergenic 40.0%
! GAAACTAAGAAATCGGCTTC+TGG - chr3.3:63255656-63255675 MS.gene35664:intron 40.0%
! GGGTACAGGATGGAAATTTT+CGG - chr3.3:63259647-63259666 MS.gene35664:intron 40.0%
! GGTACAGGATGGAAATTTTC+GGG - chr3.3:63259648-63259667 MS.gene35664:intron 40.0%
! GGTTTTCGACGATGTTGATA+GGG + chr3.3:63255313-63255332 None:intergenic 40.0%
! GTACAGGATGGAAATTTTCG+GGG - chr3.3:63259649-63259668 MS.gene35664:intron 40.0%
! TACAGGATGGAAATTTTCGG+GGG - chr3.3:63259650-63259669 MS.gene35664:intron 40.0%
! TATGGCATGCCTTCCATTTT+AGG - chr3.3:63260185-63260204 MS.gene35664:intron 40.0%
! TCAGCTGTATGGCTTTTAAC+TGG + chr3.3:63257422-63257441 None:intergenic 40.0%
! TTATCCTTTGAAAACCACCG+CGG + chr3.3:63261059-63261078 None:intergenic 40.0%
! TTCGTCCCATTTTCCAAACA+AGG + chr3.3:63260253-63260272 None:intergenic 40.0%
! TTGAGATGGATTTCACCGAA+AGG + chr3.3:63255334-63255353 None:intergenic 40.0%
!! AGCCTACAGTTTTATAGGGA+CGG - chr3.3:63257059-63257078 MS.gene35664:CDS 40.0%
!! CGATGGTTTGTTCTACAAGA+TGG - chr3.3:63255163-63255182 MS.gene35664:intron 40.0%
!! GCAAAAGTGCTTTGAGGAAA+TGG - chr3.3:63258742-63258761 MS.gene35664:intron 40.0%
!! TTCCTCAAAGCACTTTTGCA+GGG + chr3.3:63258741-63258760 None:intergenic 40.0%
!! TTTCCTCAAAGCACTTTTGC+AGG + chr3.3:63258742-63258761 None:intergenic 40.0%
!!! AACGCCTAAGTTTTTTTCCC+TGG + chr3.3:63260133-63260152 None:intergenic 40.0%
!!! AAGAGATTTTCGGTGTTCAC+GGG - chr3.3:63255489-63255508 MS.gene35664:intron 40.0%
!!! ATTTCTTTTTGAGTGGGGGT+GGG + chr3.3:63256848-63256867 None:intergenic 40.0%
!!! TATTTCTTTTTGAGTGGGGG+TGG + chr3.3:63256849-63256868 None:intergenic 40.0%
!!! TGCCTTCCATTTTAGGTTCA+TGG - chr3.3:63260192-63260211 MS.gene35664:intron 40.0%
AAAAAGCAGGGGAAGTTAGG+GGG + chr3.3:63258208-63258227 None:intergenic 45.0%
AATGGAGACTACACTGGGAA+GGG - chr3.3:63260288-63260307 MS.gene35664:intron 45.0%
AATGGCGTAACGTGTCAATG+AGG + chr3.3:63255788-63255807 None:intergenic 45.0%
ACACGGACACCTATGAGATT+AGG - chr3.3:63255973-63255992 MS.gene35664:intron 45.0%
ACACTTATGTGAGCTATCGG+AGG + chr3.3:63256031-63256050 None:intergenic 45.0%
ACATTTCCGCATTGCCAGAA+AGG - chr3.3:63258098-63258117 MS.gene35664:intron 45.0%
ACGCCTTTCTCTTTCTCTAC+AGG + chr3.3:63258632-63258651 None:intergenic 45.0%
ATAGCAATTGGCTAGCAGGT+AGG + chr3.3:63258296-63258315 None:intergenic 45.0%
ATCAGTTGGAGTTGCTATGC+AGG - chr3.3:63258976-63258995 MS.gene35664:intron 45.0%
ATCGTGTGAGATACCCATGT+CGG - chr3.3:63256455-63256474 MS.gene35664:CDS 45.0%
ATGAATCGGAGCTGTCGAAT+CGG + chr3.3:63255008-63255027 None:intergenic 45.0%
CAGGAGTCATCTTGACTAAC+AGG - chr3.3:63257606-63257625 MS.gene35664:CDS 45.0%
CATAGTCACAGCCATAGCAA+CGG - chr3.3:63255025-63255044 MS.gene35664:CDS 45.0%
CCAGGATTCTGATCAGAACA+TGG + chr3.3:63256716-63256735 None:intergenic 45.0%
CCATGTTCTGATCAGAATCC+TGG - chr3.3:63256713-63256732 MS.gene35664:intron 45.0%
CCTCCCCTTGTGTTAACAAA+TGG - chr3.3:63258063-63258082 MS.gene35664:intron 45.0%
CGACATAGAGAATCCTCATG+AGG + chr3.3:63259009-63259028 None:intergenic 45.0%
CGAGATTAAGACCAGACCAA+CGG - chr3.3:63260763-63260782 MS.gene35664:CDS 45.0%
CGAGCAATGATGATCACTGA+AGG - chr3.3:63256120-63256139 MS.gene35664:CDS 45.0%
CGCCTTTCTCTTTCTCTACA+GGG + chr3.3:63258631-63258650 None:intergenic 45.0%
CTAAAGTCAGTGAACGGAGA+CGG + chr3.3:63254950-63254969 None:intergenic 45.0%
GACCCTGTAGAGAAAGAGAA+AGG - chr3.3:63258626-63258645 MS.gene35664:intron 45.0%
GATAGTTGCATGTCACTGTG+AGG - chr3.3:63259626-63259645 MS.gene35664:intron 45.0%
GGCATGCTAAAGTCAGTGAA+CGG + chr3.3:63254956-63254975 None:intergenic 45.0%
GGGACACTTATGTGAGCTAT+CGG + chr3.3:63256034-63256053 None:intergenic 45.0%
GGGTGAATTACGGTAAAGGA+TGG - chr3.3:63255134-63255153 MS.gene35664:intron 45.0%
GGTTATAGCAATTGGCTAGC+AGG + chr3.3:63258300-63258319 None:intergenic 45.0%
TAATGGAGACTACACTGGGA+AGG - chr3.3:63260287-63260306 MS.gene35664:intron 45.0%
TATTTCCGACCAAGCTTCAC+CGG - chr3.3:63254916-63254935 MS.gene35664:CDS 45.0%
TCAATTCAGCTTGACCCTGT+CGG - chr3.3:63259705-63259724 MS.gene35664:intron 45.0%
TCAGCTTACACGAGTACTCT+TGG + chr3.3:63259936-63259955 None:intergenic 45.0%
TCAGTTGGAGTTGCTATGCA+GGG - chr3.3:63258977-63258996 MS.gene35664:intron 45.0%
TCGGCGATGAATCTATTCGA+AGG - chr3.3:63255263-63255282 MS.gene35664:CDS 45.0%
TCTTCCTTCGGTTGAAGCAT+AGG + chr3.3:63259050-63259069 None:intergenic 45.0%
TCTTTGCACTCCCCAAAGAA+CGG + chr3.3:63256764-63256783 None:intergenic 45.0%
TGAACTTACCCCTGGATTGA+AGG - chr3.3:63260416-63260435 MS.gene35664:CDS 45.0%
TGAAGCTTGGTCGGAAATAG+CGG + chr3.3:63254915-63254934 None:intergenic 45.0%
TGACACGTTACGCCATTTAG+AGG - chr3.3:63255791-63255810 MS.gene35664:CDS 45.0%
TGACTAACAGGTCAAGAGCT+TGG - chr3.3:63257618-63257637 MS.gene35664:CDS 45.0%
TGAGATTAGGTGTGTCTCTG+AGG - chr3.3:63255986-63256005 MS.gene35664:intron 45.0%
TGTGCTAATGCTCGCATCTT+TGG - chr3.3:63259356-63259375 MS.gene35664:intron 45.0%
TTAACTCAGGGCCGTTCTTT+GGG - chr3.3:63256750-63256769 MS.gene35664:intron 45.0%
TTCAAATCAACAACCACCGC+CGG + chr3.3:63255067-63255086 None:intergenic 45.0%
TTCTCTTTCTCTACAGGGTC+TGG + chr3.3:63258626-63258645 None:intergenic 45.0%
TTCTTGAGGCCCATCACTTT+AGG + chr3.3:63256806-63256825 None:intergenic 45.0%
TTGAAGATCAACGACCTCGT+CGG - chr3.3:63255082-63255101 MS.gene35664:intron 45.0%
TTGATGAGAGCCAAAGACAG+TGG - chr3.3:63257909-63257928 MS.gene35664:intron 45.0%
TTTAACTCAGGGCCGTTCTT+TGG - chr3.3:63256749-63256768 MS.gene35664:intron 45.0%
! AGAAATCGGCTTCTGGATGA+AGG - chr3.3:63255663-63255682 MS.gene35664:intron 45.0%
! AGGAAGTGCAAGTGAATCTG+AGG - chr3.3:63258370-63258389 MS.gene35664:intron 45.0%
! CCATTTGTTAACACAAGGGG+AGG + chr3.3:63258066-63258085 None:intergenic 45.0%
! CCTTCGGTTTTTCTCAGAGA+AGG - chr3.3:63259132-63259151 MS.gene35664:intron 45.0%
! CCTTCTCTGAGAAAAACCGA+AGG + chr3.3:63259135-63259154 None:intergenic 45.0%
! GTGTTTGTTTGCCGGGTTTT+TGG - chr3.3:63260671-63260690 MS.gene35664:intron 45.0%
!! AAGAGAAAGGCGTCAGTCTT+TGG - chr3.3:63258639-63258658 MS.gene35664:intron 45.0%
!! AGCAGTTCCTCTCTGAAACA+CGG - chr3.3:63255956-63255975 MS.gene35664:intron 45.0%
!! AGCCGAGCCTACAGTTTTAT+AGG - chr3.3:63257054-63257073 MS.gene35664:CDS 45.0%
!! ATGATGGAGAGGTTTTCCAG+TGG - chr3.3:63259748-63259767 MS.gene35664:intron 45.0%
!! CCAAAGTCAAAGTACCGACA+GGG + chr3.3:63259722-63259741 None:intergenic 45.0%
!! GCCGAGCCTACAGTTTTATA+GGG - chr3.3:63257055-63257074 MS.gene35664:CDS 45.0%
!! TCCAAAGTCAAAGTACCGAC+AGG + chr3.3:63259723-63259742 None:intergenic 45.0%
!!! TTTCTTTTTGAGTGGGGGTG+GGG + chr3.3:63256847-63256866 None:intergenic 45.0%
!! ATAAATAAATATATATGTAT+TGG - chr3.3:63256380-63256399 MS.gene35664:CDS 5.0%
!! CAAATTAAAATAAATTTATA+GGG + chr3.3:63257321-63257340 None:intergenic 5.0%
!! TCAAATTAAAATAAATTTAT+AGG + chr3.3:63257322-63257341 None:intergenic 5.0%
AGATGGCTCAGGTAGGAGTT+TGG - chr3.3:63256574-63256593 MS.gene35664:intron 50.0%
AGTGAGTGAAGCGGCTATTC+AGG - chr3.3:63255686-63255705 MS.gene35664:CDS 50.0%
ATCAACGACCTCGTCGGAAA+TGG - chr3.3:63255088-63255107 MS.gene35664:intron 50.0%
ATGGAGACTACACTGGGAAG+GGG - chr3.3:63260289-63260308 MS.gene35664:CDS 50.0%
CAGGGTCAAGCTGAATTGAG+CGG + chr3.3:63259704-63259723 None:intergenic 50.0%
CCCAATACCCTCCCATATAG+CGG + chr3.3:63261097-63261116 None:intergenic 50.0%
CGAATCGGATCTAACAGCGA+CGG + chr3.3:63254993-63255012 None:intergenic 50.0%
CTCGTCGGAAATGGAATCTC+AGG - chr3.3:63255097-63255116 MS.gene35664:intron 50.0%
CTGAGATTCCATTTCCGACG+AGG + chr3.3:63255099-63255118 None:intergenic 50.0%
GACACATGTCCCGACATCTT+TGG - chr3.3:63261140-63261159 MS.gene35664:CDS 50.0%
GCGTAACGTGTCAATGAGGA+TGG + chr3.3:63255784-63255803 None:intergenic 50.0%
GGATGAAGGAGTGAGTGAAG+CGG - chr3.3:63255677-63255696 MS.gene35664:CDS 50.0%
GGCCGTCCCTATAAAACTGT+AGG + chr3.3:63257064-63257083 None:intergenic 50.0%
GTAAAGGATGGAGACCTCGA+TGG - chr3.3:63255146-63255165 MS.gene35664:intron 50.0%
GTACACAGAATGCAGTGGAG+AGG + chr3.3:63256503-63256522 None:intergenic 50.0%
GTAGACAGACAAGGTCGATC+TGG - chr3.3:63257874-63257893 MS.gene35664:intron 50.0%
TAACTCAGGGCCGTTCTTTG+GGG - chr3.3:63256751-63256770 MS.gene35664:intron 50.0%
TAGGTGTCCGTGTTTCAGAG+AGG + chr3.3:63255966-63255985 None:intergenic 50.0%
TCTGCCTATGCTTCAACCGA+AGG - chr3.3:63259043-63259062 MS.gene35664:intron 50.0%
TCTTTCGCCGCTTAACACGA+GGG + chr3.3:63258598-63258617 None:intergenic 50.0%
TGTCAGAGGCTCATCTACTC+TGG - chr3.3:63260328-63260347 MS.gene35664:CDS 50.0%
TTCTTTCGCCGCTTAACACG+AGG + chr3.3:63258599-63258618 None:intergenic 50.0%
TTGAGGCCCATCACTTTAGG+AGG + chr3.3:63256803-63256822 None:intergenic 50.0%
TTTCACCGGTGAAGCTTGGT+CGG + chr3.3:63254924-63254943 None:intergenic 50.0%
TTTGAGAGCAGAGTCACGTG+AGG - chr3.3:63255527-63255546 MS.gene35664:intron 50.0%
! ACCGCTATATGGGAGGGTAT+TGG - chr3.3:63261093-63261112 MS.gene35664:CDS 50.0%
! AGAGGTTTTCCAGTGGAGCA+AGG - chr3.3:63259755-63259774 MS.gene35664:intron 50.0%
! CCCTGTCGGTACTTTGACTT+TGG - chr3.3:63259719-63259738 MS.gene35664:intron 50.0%
! TCTACTCTGGAAGCGAAGCA+AGG - chr3.3:63260341-63260360 MS.gene35664:CDS 50.0%
!! CCGCTATATGGGAGGGTATT+GGG - chr3.3:63261094-63261113 MS.gene35664:CDS 50.0%
!! CTATATGGGAGGGTATTGGG+AGG - chr3.3:63261097-63261116 MS.gene35664:CDS 50.0%
!! CTCAAAGCACTTTTGCAGGG+AGG + chr3.3:63258738-63258757 None:intergenic 50.0%
!! CTCCCTGCAAAAGTGCTTTG+AGG - chr3.3:63258736-63258755 MS.gene35664:intron 50.0%
AACGGAGACGGAGGTTTCAC+CGG + chr3.3:63254938-63254957 None:intergenic 55.0%
AAGCGGGGCATACCGCTATA+TGG - chr3.3:63261082-63261101 MS.gene35664:CDS 55.0%
AAGTCAGTGAACGGAGACGG+AGG + chr3.3:63254947-63254966 None:intergenic 55.0%
AGAGTCACGTGAGGATCGTG+TGG - chr3.3:63255536-63255555 MS.gene35664:intron 55.0%
AGCGGGGCATACCGCTATAT+GGG - chr3.3:63261083-63261102 MS.gene35664:CDS 55.0%
AGCTGGGCCTCCTAAAGTGA+TGG - chr3.3:63256793-63256812 MS.gene35664:intron 55.0%
AGGGTGATGACTGACCTGAG+AGG + chr3.3:63259604-63259623 None:intergenic 55.0%
CACAGAATGCAGTGGAGAGG+AGG + chr3.3:63256500-63256519 None:intergenic 55.0%
CCAACCACCCTCGTGTTAAG+CGG - chr3.3:63258588-63258607 MS.gene35664:intron 55.0%
CTTTAGTGGCTGTCATGCCC+TGG - chr3.3:63259791-63259810 MS.gene35664:intron 55.0%
GACTACACTGGGAAGGGGAA+AGG - chr3.3:63260294-63260313 MS.gene35664:CDS 55.0%
GAGGTTTCACCGGTGAAGCT+TGG + chr3.3:63254928-63254947 None:intergenic 55.0%
GATCTAACAGCGACGGATGG+TGG + chr3.3:63254986-63255005 None:intergenic 55.0%
GCAAAGAGCTCAACCGAGCT+GGG - chr3.3:63256777-63256796 MS.gene35664:intron 55.0%
GCTCGGAAGATGCAAGAGAG+CGG - chr3.3:63261026-63261045 MS.gene35664:CDS 55.0%
GCTGGGCCTCCTAAAGTGAT+GGG - chr3.3:63256794-63256813 MS.gene35664:intron 55.0%
GGAAGATGCAAGAGAGCGGT+TGG - chr3.3:63261030-63261049 MS.gene35664:CDS 55.0%
GGGCATACCGCTATATGGGA+GGG - chr3.3:63261087-63261106 MS.gene35664:CDS 55.0%
TACGGCTTGAGCAACGGCAA+CGG - chr3.3:63260829-63260848 MS.gene35664:CDS 55.0%
TCGGATCTAACAGCGACGGA+TGG + chr3.3:63254989-63255008 None:intergenic 55.0%
TGCAAAGAGCTCAACCGAGC+TGG - chr3.3:63256776-63256795 MS.gene35664:intron 55.0%
TGCAGGGTGATAGCCTCATG+AGG - chr3.3:63258993-63259012 MS.gene35664:intron 55.0%
! ATAGCGGAGACGCAGCAGAA+AGG + chr3.3:63254899-63254918 None:intergenic 55.0%
! CACTTTTGCAGGGAGGAGAG+AGG + chr3.3:63258731-63258750 None:intergenic 55.0%
! CTCGCTGACTACCGTTGCTA+TGG + chr3.3:63255039-63255058 None:intergenic 55.0%
! GAGACCGCGGTGGTTTTCAA+AGG - chr3.3:63261052-63261071 MS.gene35664:CDS 55.0%
! GCATGTCACTGTGAGGGTAC+AGG - chr3.3:63259633-63259652 MS.gene35664:intron 55.0%
! GTCACTGTGAGGGTACAGGA+TGG - chr3.3:63259637-63259656 MS.gene35664:intron 55.0%
! TCACTTTAGGAGGCCCAGCT+CGG + chr3.3:63256793-63256812 None:intergenic 55.0%
!! TCTCTGAGGCTGACACTCGT+AGG - chr3.3:63256000-63256019 MS.gene35664:intron 55.0%
AAGAGAGCGGTTGGAGACCG+CGG - chr3.3:63261039-63261058 MS.gene35664:CDS 60.0%
CCGCTTAACACGAGGGTGGT+TGG + chr3.3:63258591-63258610 None:intergenic 60.0%
CGGTAGTCAGCGAGAACAGC+CGG - chr3.3:63255045-63255064 MS.gene35664:CDS 60.0%
GGGGCATACCGCTATATGGG+AGG - chr3.3:63261086-63261105 MS.gene35664:CDS 60.0%
GTGGCTGTCATGCCCTGGTT+TGG - chr3.3:63259796-63259815 MS.gene35664:intron 60.0%
TAGTCAGCGAGAACAGCCGG+CGG - chr3.3:63255048-63255067 MS.gene35664:CDS 60.0%
TGAGGATCGTGTGGCGTGGA+TGG - chr3.3:63255545-63255564 MS.gene35664:intron 60.0%
TTCGCCGCTTAACACGAGGG+TGG + chr3.3:63258595-63258614 None:intergenic 60.0%
! CTAACAGCGACGGATGGTGG+TGG + chr3.3:63254983-63255002 None:intergenic 60.0%
CACGTGAGGATCGTGTGGCG+TGG - chr3.3:63255541-63255560 MS.gene35664:intron 65.0%
GCTTGAGCAACGGCAACGGC+AGG - chr3.3:63260833-63260852 MS.gene35664:CDS 65.0%
!! ACAGCGACGGATGGTGGTGG+AGG + chr3.3:63254980-63254999 None:intergenic 65.0%
AGAGCGGTTGGAGACCGCGG+TGG - chr3.3:63261042-63261061 MS.gene35664:CDS 70.0%
TCAGCGAGAACAGCCGGCGG+TGG - chr3.3:63255051-63255070 MS.gene35664:CDS 70.0%
!! GCGACGGATGGTGGTGGAGG+AGG + chr3.3:63254977-63254996 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 63254890 63261211 63254890 ID=MS.gene35664
chr3.3 mRNA 63254890 63261211 63254890 ID=MS.gene35664.t1;Parent=MS.gene35664
chr3.3 exon 63260747 63261211 63260747 ID=MS.gene35664.t1.exon1;Parent=MS.gene35664.t1
chr3.3 CDS 63260747 63261211 63260747 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63260289 63260645 63260289 ID=MS.gene35664.t1.exon2;Parent=MS.gene35664.t1
chr3.3 CDS 63260289 63260645 63260289 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63258127 63258223 63258127 ID=MS.gene35664.t1.exon3;Parent=MS.gene35664.t1
chr3.3 CDS 63258127 63258223 63258127 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63257293 63257732 63257293 ID=MS.gene35664.t1.exon4;Parent=MS.gene35664.t1
chr3.3 CDS 63257293 63257732 63257293 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63256948 63257103 63256948 ID=MS.gene35664.t1.exon5;Parent=MS.gene35664.t1
chr3.3 CDS 63256948 63257103 63256948 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63256325 63256492 63256325 ID=MS.gene35664.t1.exon6;Parent=MS.gene35664.t1
chr3.3 CDS 63256325 63256492 63256325 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63256105 63256245 63256105 ID=MS.gene35664.t1.exon7;Parent=MS.gene35664.t1
chr3.3 CDS 63256105 63256245 63256105 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63255664 63255894 63255664 ID=MS.gene35664.t1.exon8;Parent=MS.gene35664.t1
chr3.3 CDS 63255664 63255894 63255664 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63255247 63255360 63255247 ID=MS.gene35664.t1.exon9;Parent=MS.gene35664.t1
chr3.3 CDS 63255247 63255360 63255247 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
chr3.3 exon 63254890 63255075 63254890 ID=MS.gene35664.t1.exon10;Parent=MS.gene35664.t1
chr3.3 CDS 63254890 63255075 63254890 ID=cds.MS.gene35664.t1;Parent=MS.gene35664.t1
Gene Sequence

>MS.gene35664

ATGCATCCTTTCTGCTGCGTCTCCGCTATTTCCGACCAAGCTTCACCGGTGAAACCTCCGTCTCCGTTCACTGACTTTAGCATGCCTCCTCCACCACCATCCGTCGCTGTTAGATCCGATTCGACAGCTCCGATTCATAGTCACAGCCATAGCAACGGTAGTCAGCGAGAACAGCCGGCGGTGGTTGTTGATTTGAAGATCAACGACCTCGTCGGAAATGGAATCTCAGGTATACTGTATAAATGGGTGAATTACGGTAAAGGATGGAGACCTCGATGGTTTGTTCTACAAGATGGAGTTCTCTCTTACTACAAGATTCATGGACCTGATAAAATTATCGTTAATCATGAAACTGAAAAAGGCTCCAAAGTTATCGGCGATGAATCTATTCGAAGGATCAATCGCAATCGTAATTCTTATCCCTATCAACATCGTCGAAAACCTTTCGGTGAAATCCATCTCAAGGTTCGTTAATCAATTAATCCAATTCATCAACTATGTTTGAATCAGTATTCATATGATTAATTTTGATTTTGATTTTAAAATATTGATAAACTGTGATTTAGGTTTCAACGATTCGCGAGAGTAAATCAGATGATAAGAGATTTTCGGTGTTCACGGGAATGAAGAGACTTCATTTGAGAGCAGAGTCACGTGAGGATCGTGTGGCGTGGATGGAAGCTTTGCAAGCAGTGAAAGATATGTTCCCTAGAATTTCCAATAGTGAATTAATGGCTCCTGTGGATAACGTAACAATTTCAACTGAGAAACTAAGAAATCGGCTTCTGGATGAAGGAGTGAGTGAAGCGGCTATTCAGGACAGTGAACAAATTATGAAAACTGAGTTTGCAGCGTTACAGAATCAATTAGTGTTGCTTAAGCAGAAGCATTCCATCCTCATTGACACGTTACGCCATTTAGAGGTACTACATCATTTTTAATTCAAGTTGAAATCTTCAATTGTGTTTTACTATCCGTTGTTATATACTTTTCTGTGTTTACTTTAACTGTCAAAACTTTCTGGTTTGTAATACTTCAATTGAGAGAAGATTAATTGTAAAGCGTAAGCAGTTCCTCTCTGAAACACGGACACCTATGAGATTAGGTGTGTCTCTGAGGCTGACACTCGTAGGTCACTCCTCCGATAGCTCACATAAGTGTCCCGATAAAAGCATTTTTTTTTCTTTACTTGGACATTCCCTGGACACTTTCAAAAGAGTTAAAATATGTCGAGCAATGATGATCACTGAAGGGTTAGAGACATTAAATTTGATTACATTGCTTTTAGCTTTTGGTATAGGAGATAGATGGATAAAGATGAAAACCTATCATATTTTGTTTAAGAACTTTTTGTAATGAAACAATTTGTTCAATTAAGATGCACATATATGTAATGAAACAATTTGTTCAATTAAAATGCACATATATATAGTTTAATTATTAATTTAGATATTTTATTGATAATGGTCATATTTTATTTTTTATAATAAATAAATAAATATATATGTATTGGTGCCGGTGTCCTATATTTTTTAAATTAGTAGTGTCGATGTGTTCGTGTTTGTATCGTGTGAGATACCCATGTCGGAGTATGTGTTTTATAGGTTCCTCCTCTCCACTGCATTCTGTGTACACAATCAGTTTCATGGCTTGTATGCAGAATTTGAATCATGGTTACTAATATAGATGGCTCAGGTAGGAGTTTGGTATCGTAATGTGACCAAATATAAACCTTAAAACTCGGAAGTACGAAATTGTGGTCAATGAGTTATTCTTATGAAGTTTTATAGCTCATTTATTTACTCTACTGTAACTTCTAATGACCATGTTCTGATCAGAATCCTGGCACAGATTATACATTTAACTCAGGGCCGTTCTTTGGGGAGTGCAAAGAGCTCAACCGAGCTGGGCCTCCTAAAGTGATGGGCCTCAAGAAAAAATTATTGCTCAATATCCCCACCCCCACTCAAAAAGAAATATATACATGTTTCATGTTTCAATTTCTAAGTAAAAAAAGCACGTCTTTAGTAAAAATAATTGCTAATTTTGATTTCGGTGGCTAATAACCAGTATACGAGTGTTATTTTCAATTTAAATAGAAGATTAATCTTTTAAAAAAATTGTGCGTTGTTTTTATTTATTAGGGGCCTATTTTTACTACGAGAGCCGAGCCTACAGTTTTATAGGGACGGCCCTGATTTAACTGATTATGTATCTGTTCAACCAAATGCTCTTTAATTTGAAATTGTATGAGCGGTGAGATGCTACATCAATTTAAGAACCAGTTTGAATACACTCTTAGTAAAAACATGTAAAAGAAATATTAAAAGGATCTTGCAATAACTGAGTATTTTTAAACATCAGCTTCTGTATCTCAATTTTTCAATAGCTCTCTCATTTACCTTCTCTATAGACACTTGTATAAGGACCCTATAAATTTATTTTAATTTGAGAAGTTTCCAAAAGTTAGAAGTTGATCCAAACCAAGCAATACTCTTGTATGATTTATTACGACCTTAAAATTTTCTTCCAGTTAAAAGCCATACAGCTGATCAACTAATGCCAACTATTATACCTAATTAAAGTATCTTCGACAATTAGACACATATTAATAGATTCAGGTTTATTTCTCCCTTCATTTGTATCTTGCAAGTTGCAAGCGTGTCTTCCCTAGTGAAAAACTGTTTATTATCCTGTCAGACAATATTGCACTGATCAGGAGTCATCTTGACTAACAGGTCAAGAGCTTGGTATATTCTACATGTGATGACTATTTTAATTTGATGTTTTTTAATCTGATTAAATCCTGCATTGATGATATGCTTACGGCATTATTTTAATCAACTGAATTGCCCAATGTTGTCATGGTTTCCAACTTGTTTAACAAAACTGTTTACTCTCTAATTGTTTTGCATGTTGTTTTGTATTAAGGGTAAACTTTTTATTATAGTGTGTTAATAAACTTTCGTCCGTATTACATTATTGTAGACAGACAAGGTCGATCTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAATGTTGAAGATTCCTCTGGATTAATGCAAGAAAAATTTAGTGGTATGTTTTTTTTAATGGCTTGTTTATTAGGCATTAGTTTTCTCATATGCTCAACAGTCAAAATCTAGTCTTCGCATAGTTTTTAAGGCCTCCCCTTGTGTTAACAAATGGTTAAGATTTCAGACATTTCCGCATTGCCAGAAAGGTTAATGTAGATGTTTCATAGGTCTGGTGATTCATTTTCTTGAAACTTTAAGTATTTATCTTCCACTGTCTCTAATACACAGATTCCCCCTAACTTCCCCTGCTTTTTTTTTTCTTTCTCAAATCTTTCCACCCCTATATTCAATTAGTGTGTAATCTGTAATGCTTATTACTCCTACCTGCTAGCCAATTGCTATAACCTATCTGTGATTTTTACACTTATTTGTTTCATTTTCTATTTTTAATTCAGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGAGAGAAATGATGTTGCAGAGGAAGAAACAGATGACGATGACAATGTCTTTTTTGATACCCGTGATATTCTATCATCAAGTTCTTTTAAAAGTAATGGGTCTGATTATAGAGTATCATCTTTCTCATCTGATAATGATGCATTTGAATCAGAGGACGATGTAGATTCTTCAAATAGATATATTGGAACCAACCACCCTCGTGTTAAGCGGCGAAAGAAATTGCCAGACCCTGTAGAGAAAGAGAAAGGCGTCAGTCTTTGGTCAATGATCAAGGATAATATAGGGAAAGATCTAACAAAAGTTTGCCTTCCTGTTTACTTTAATGAGCCTCTCTCCTCCCTGCAAAAGTGCTTTGAGGAAATGGAGTACTCATATCTGCTTGACCAAGCATATGAATGGGGAAAAAGGGTAAGTCAGATTTGGCTGATAGATTTATATTGCTCTGCCATATTAAGGAAAATATGGGCACTTCAATATGATCTAAGAAAACTAATTGATAAAATGTTGCGCAATGTTGATTTTTTTTTACCTATTAGCTCTTTCAATGCAGTATTGGTGTGCTCTTCCCTTTTTTAATCAGTTGGAGTTGCTATGCAGGGTGATAGCCTCATGAGGATTCTCTATGTCGCTGCTTTTGCTGTATCTGCCTATGCTTCAACCGAAGGAAGAATTTGCAAACCATTTAATCCATTACTTGGGGAAACATATGAGGCTAACTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAGAAGGTATAATATATAATGACATTATGAATGTATTACCTTTTTACAAGTCAATTAATCATGATAAATTCTTCGTCTATCTTTCTTTCTGATTTCATGGGGTATTGGTTTCTTCCATAGATCCACTATTGTCTGAATGTGCTTTTTCTTTTTGTTATTTTTGAGGTCGAAATGAGAGTTACTTGAATAATTTATTTGATGAAAACTGTGTGCTAATGCTCGCATCTTTGGACTCCTTACATCTACTTCGCTTCTGTTTGAAAGGAACAATGTTCCCAATATGGAGGACAAGAATTTTGGAAACTACACTATTTAGTTCATGAATAAAAGGAGTAATTGAGTCCATTAGTTCTACACAAACAACCCTATGAACATGATACACTTTAATTTGGAGATACAAATTTTCTTTTTTCAATCTATGTCCTCTATCTGAAATTATTAATATTTATGCTTCCTCTCAGGTCAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGATGGAAATTTTCGGGGGATAGCAACTTAAAAAGCAAATTTTGGGGCCGCTCAATTCAGCTTGACCCTGTCGGTACTTTGACTTTGGAATTTGATGATGGAGAGGTTTTCCAGTGGAGCAAGGTATGTTTTAATTACTTTAGTGGCTGTCATGCCCTGGTTTGGTTTTAAAGCAGTAAATCAAATTGACTTTTCTTTTCAGGTTACGACATCAATATACAATCTCATATTAGGAAAGCTTTACTGTGATCATTATGGTACGATGCGTATAGAGGGAAACCAAGAGTACTCGTGTAAGCTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCATCAGGTGCTTTATTTCTGTTTCATGGATTTCATTTTTTTTACTGATAATATATTCCTCTCTGGCTTGTATAATGTAGAGTATCTTATTGTATAGATTTCATCCTCACACACTTTGTACCAATGATCGGATTACAATTCCAGGGAAAAAAACTTAGGCGTTTGAATAAATATCCTTTTTGAATGTCATCTTACTATGGCATGCCTTCCATTTTAGGTTCATGGTATAGTACAAGATAGGAACGGAAAAACAGTATCAACCTTGTTTGGAAAATGGGACGAAAGCATGCATTATGTTAATGGAGACTACACTGGGAAGGGGAAAGGTCATGAATCTTTGTCAGAGGCTCATCTACTCTGGAAGCGAAGCAAGGCTCCCATGTTTCCTACTAGATATAACTTCACTCGTTTTGCCATCACGTTAAATGAACTTACCCCTGGATTGAAGGTTTGTTCTGTTAACTAATACTTTTTACGTGTTGCCACAATTATATGGATTTTAAGAATAAATATTCTCTGCAATTTGTGCATTACATATTTGTGTGTTTTTACTGGAGTTGACTTAACTCTTCATTAACAAATCATTTTCTGTAACAAAGGTGAAGTATGAATCATTTGAATATAACAAGTAAATCCAAAAGAAAGAACAAGATAGTTCCATCTTCATTATGCGTATTGTGTGTGTTTGTTTGCCGGGTTTTTGGCATTTTACTAGACATTCATTATAATTTATTTATTTGTGGATACATAGGAGAAATTGCCACCAACAGATTCGAGATTAAGACCAGACCAACGGTATTTAGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTACGGCTTGAGCAACGGCAACGGCAGGTGCCTATTACATTTTGTGATGTCTTATCTTTGTTTTTACTAAATCATTTGTAGTACCTTGAGAATTCAGGCTTGAATAATGATTATCTTATATGGATCACATGTCATAGACACACATGCCTTTATAATTTCCAATAATGATTATCTTATATTTGTTTTAATGATATTCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAGACCGCGGTGGTTTTCAAAGGATAAAGCAAGCGGGGCATACCGCTATATGGGAGGGTATTGGGAGGCTCGAGAAAAAAGAAACTGGGACACATGTCCCGACATCTTTGGCCAAATTTCTCCAGATCATCTATCTGATGAAGTTCAAATTACATCTTAA

Protein sequence

>MS.gene35664.t1

MHPFCCVSAISDQASPVKPPSPFTDFSMPPPPPSVAVRSDSTAPIHSHSHSNGSQREQPAVVVDLKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNHETEKGSKVIGDESIRRINRNRNSYPYQHRRKPFGEIHLKVSTIRESKSDDKRFSVFTGMKRLHLRAESREDRVAWMEALQAVKDMFPRISNSELMAPVDNVTISTEKLRNRLLDEGVSEAAIQDSEQIMKTEFAALQNQLVLLKQKHSILIDTLRHLETDKVDLENTVVDESQRQWNVEDSSGLMQEKFSEGSASESEDDNERNDVAEEETDDDDNVFFDTRDILSSSSFKSNGSDYRVSSFSSDNDAFESEDDVDSSNRYIGTNHPRVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGKRGDSLMRILYVAAFAVSAYASTEGRICKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFSGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNQEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMHYVNGDYTGKGKGHESLSEAHLLWKRSKAPMFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWRPRWFSKDKASGAYRYMGGYWEAREKRNWDTCPDIFGQISPDHLSDEVQITS