Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35816.t1 | XP_003596988.1 | 99.6 | 979 | 4 | 0 | 1 | 979 | 1 | 979 | 0.00E+00 | 1969.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35816.t1 | Q9SIB9 | 85.8 | 959 | 131 | 2 | 26 | 979 | 32 | 990 | 0.0e+00 | 1687.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35816.t1 | G7ITZ5 | 99.6 | 979 | 4 | 0 | 1 | 979 | 1 | 979 | 0.0e+00 | 1969.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052361 | MS.gene35816 | 0.828356 | 9.41E-55 | -1.69E-46 |
MS.gene054016 | MS.gene35816 | 0.846525 | 2.06E-59 | -1.69E-46 |
MS.gene054017 | MS.gene35816 | 0.995112 | 3.96E-213 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35816 | MS.gene02695 | PPI |
MS.gene56790 | MS.gene35816 | PPI |
MS.gene35816 | MS.gene99212 | PPI |
MS.gene35816 | MS.gene42646 | PPI |
MS.gene35816 | MS.gene011805 | PPI |
MS.gene35816 | MS.gene014952 | PPI |
MS.gene041065 | MS.gene35816 | PPI |
MS.gene35816 | MS.gene90508 | PPI |
MS.gene32746 | MS.gene35816 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35816.t1 | MTR_2g088360 | 99.591 | 979 | 4 | 0 | 1 | 979 | 1 | 979 | 0.0 | 2018 |
MS.gene35816.t1 | MTR_4g048190 | 89.566 | 968 | 92 | 2 | 15 | 979 | 18 | 979 | 0.0 | 1805 |
MS.gene35816.t1 | MTR_5g022940 | 84.710 | 896 | 136 | 1 | 83 | 977 | 2 | 897 | 0.0 | 1609 |
MS.gene35816.t1 | MTR_1g075520 | 76.275 | 902 | 206 | 2 | 79 | 979 | 1 | 895 | 0.0 | 1445 |
MS.gene35816.t1 | MTR_5g022940 | 85.246 | 793 | 117 | 0 | 185 | 977 | 1 | 793 | 0.0 | 1442 |
MS.gene35816.t1 | MTR_2g067620 | 85.962 | 577 | 41 | 6 | 136 | 693 | 134 | 689 | 0.0 | 960 |
MS.gene35816.t1 | MTR_2g067620 | 81.325 | 166 | 1 | 1 | 844 | 979 | 700 | 865 | 8.76e-76 | 267 |
MS.gene35816.t1 | MTR_4g115490 | 70.833 | 144 | 16 | 2 | 660 | 802 | 154 | 272 | 1.58e-56 | 197 |
MS.gene35816.t1 | MTR_4g074000 | 44.295 | 149 | 69 | 3 | 782 | 917 | 1 | 148 | 4.01e-25 | 105 |
MS.gene35816.t1 | MTR_1g045750 | 23.810 | 462 | 251 | 16 | 205 | 651 | 122 | 497 | 2.93e-16 | 83.6 |
MS.gene35816.t1 | MTR_1g073200 | 26.582 | 395 | 238 | 13 | 264 | 651 | 170 | 519 | 4.68e-14 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35816.t1 | AT2G05710 | 87.460 | 933 | 116 | 1 | 48 | 979 | 58 | 990 | 0.0 | 1724 |
MS.gene35816.t1 | AT4G26970 | 80.126 | 951 | 189 | 0 | 29 | 979 | 45 | 995 | 0.0 | 1619 |
MS.gene35816.t1 | AT4G35830 | 84.281 | 897 | 141 | 0 | 83 | 979 | 2 | 898 | 0.0 | 1605 |
MS.gene35816.t1 | AT4G35830 | 84.654 | 795 | 122 | 0 | 185 | 979 | 1 | 795 | 0.0 | 1432 |
MS.gene35816.t1 | AT5G54950 | 75.439 | 57 | 14 | 0 | 902 | 958 | 1 | 57 | 1.22e-24 | 98.6 |
MS.gene35816.t1 | AT4G13430 | 25.909 | 440 | 235 | 15 | 225 | 651 | 140 | 501 | 1.21e-17 | 87.8 |
Find 298 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAATTCTCTCAAAACTTT+TGG | 0.200994 | 2.1:-13483664 | None:intergenic |
GCCTATTGCCTGTTGAATTT+TGG | 0.202495 | 2.1:+13482708 | MS.gene35816:CDS |
GCCAATATGTCTCCTGAATA+TGG | 0.241612 | 2.1:+13478855 | MS.gene35816:CDS |
AAGCCTGGTGGTGGTGAATT+TGG | 0.262576 | 2.1:+13477079 | MS.gene35816:CDS |
ACAAGTCTTGCTCCTGGTTC+TGG | 0.266793 | 2.1:+13480417 | MS.gene35816:CDS |
AGGGCAGTATCTTGCCTCTT+TGG | 0.272951 | 2.1:-13479258 | None:intergenic |
ATGTTTACTTGAGGGATATT+TGG | 0.273088 | 2.1:+13482369 | MS.gene35816:CDS |
TAACTGTCACACAAATTCTT+AGG | 0.279077 | 2.1:+13478669 | MS.gene35816:CDS |
ACCACATGTATTGGCAATTC+AGG | 0.281196 | 2.1:+13480660 | MS.gene35816:CDS |
CTCGTTGTTCCTCCTGGTTC+TGG | 0.283190 | 2.1:+13478089 | MS.gene35816:CDS |
CCCATGGTTGCTCCATATTC+AGG | 0.293010 | 2.1:-13478867 | None:intergenic |
GAGTCGCTGGATGGGGTGTT+GGG | 0.293228 | 2.1:+13478334 | MS.gene35816:CDS |
GAGAATTCATCGCAGTAATT+TGG | 0.293240 | 2.1:+13483677 | MS.gene35816:CDS |
ACTTTGTCTTGTGCTTCTTT+TGG | 0.305193 | 2.1:-13480061 | None:intergenic |
GAATGCAGTGCAGGCTAATA+TGG | 0.306167 | 2.1:+13477995 | MS.gene35816:CDS |
AAGAAGGACTTCAACTCTTA+TGG | 0.309032 | 2.1:+13482822 | MS.gene35816:CDS |
ATTCCCCTTTGCTTCAAATC+TGG | 0.321664 | 2.1:+13483714 | MS.gene35816:CDS |
GTTGTGGCTTATGCTCTTGC+TGG | 0.322295 | 2.1:+13480969 | MS.gene35816:CDS |
GGAGTCGCTGGATGGGGTGT+TGG | 0.326677 | 2.1:+13478333 | MS.gene35816:CDS |
AGTCCCAGCTGTTGTTGATT+TGG | 0.331621 | 2.1:+13477594 | MS.gene35816:CDS |
TGACAGAGATACAAGGCTTC+AGG | 0.333044 | 2.1:+13483426 | MS.gene35816:intron |
CAACATCTGCTTTAGTAACT+TGG | 0.337431 | 2.1:-13477382 | None:intergenic |
TCCATATTCAGGAGACATAT+TGG | 0.356776 | 2.1:-13478856 | None:intergenic |
CAATTTGTTTGCCCTGAGAT+AGG | 0.357810 | 2.1:-13479051 | None:intergenic |
CTTAGGAAACATGGTGTTGT+AGG | 0.358938 | 2.1:+13478686 | MS.gene35816:CDS |
GCTTCTGCTATCTCAGAAAA+TGG | 0.360827 | 2.1:+13480702 | MS.gene35816:CDS |
TTACAATACCTCAAGCTAAC+TGG | 0.361768 | 2.1:+13478915 | MS.gene35816:CDS |
GGCTTCAATATTGTTGGATT+CGG | 0.364215 | 2.1:+13480633 | MS.gene35816:CDS |
ACCCTTGGCTGCCCAATCCC+TGG | 0.364580 | 2.1:-13483496 | None:intergenic |
CATCGCAAGATCGCCACTTC+CGG | 0.365943 | 2.1:+13475974 | MS.gene35816:CDS |
AAAACCTCTCCTTGTTTCTC+TGG | 0.366881 | 2.1:-13478028 | None:intergenic |
GTGAATTATCGTTGGCTGAC+AGG | 0.368225 | 2.1:+13478823 | MS.gene35816:CDS |
GCCCTCAAAATTACGGTTCC+CGG | 0.379970 | 2.1:-13480898 | None:intergenic |
TCTAGAAAGAGGAAATAGTT+TGG | 0.380399 | 2.1:-13475774 | None:intergenic |
CTCTTTGGTCCTGAGATACA+TGG | 0.380632 | 2.1:-13479243 | None:intergenic |
TACATATGAAGCTATTACTA+AGG | 0.380840 | 2.1:+13482548 | MS.gene35816:CDS |
GAGCAAGGCTTCAATATTGT+TGG | 0.381018 | 2.1:+13480627 | MS.gene35816:CDS |
GATGGAGTCACGGCGTCCTT+TGG | 0.386324 | 2.1:+13475891 | MS.gene35816:CDS |
CAGTGGAAGTTCCAGGGATT+GGG | 0.390267 | 2.1:+13483485 | MS.gene35816:CDS |
GGTGGAACGGGCGGCGTTAG+CGG | 0.391565 | 2.1:-13475861 | None:intergenic |
TGCCTCCCCTCCATTGGTTG+TGG | 0.396095 | 2.1:+13480953 | MS.gene35816:CDS |
CATGCCACCATTGTGCTGGC+TGG | 0.398424 | 2.1:+13483450 | MS.gene35816:CDS |
GCCCATCAATCATAGTTGTA+TGG | 0.399890 | 2.1:-13478308 | None:intergenic |
GGCGTTAGCGGCGGCGGATG+AGG | 0.400584 | 2.1:-13475849 | None:intergenic |
ATGGTGTTACCCGGTGTTGT+TGG | 0.400750 | 2.1:+13478593 | MS.gene35816:CDS |
CTTTGCTCCAGGCAATGGTA+TGG | 0.401240 | 2.1:+13478800 | MS.gene35816:intron |
AGTCGCTGGATGGGGTGTTG+GGG | 0.406574 | 2.1:+13478335 | MS.gene35816:CDS |
TGTTGGAATGTGCACAGTCT+TGG | 0.407414 | 2.1:-13482934 | None:intergenic |
GTTGTTGGGTTCAAGTTGTC+TGG | 0.407565 | 2.1:+13478608 | MS.gene35816:CDS |
GTTGGAATGTGCACAGTCTT+GGG | 0.410552 | 2.1:-13482933 | None:intergenic |
TGAAAGAAATGAAGTCTGAT+TGG | 0.410840 | 2.1:+13479379 | MS.gene35816:CDS |
TCTCTCAATGATCCGAGAAT+TGG | 0.411423 | 2.1:+13477121 | MS.gene35816:CDS |
GTAGCATCTGCTGTGCTGTC+CGG | 0.413083 | 2.1:+13480879 | MS.gene35816:CDS |
TGTAATGTTACATGATCTAC+AGG | 0.417998 | 2.1:-13478897 | None:intergenic |
CAGGTCAATCTTGAATATCT+TGG | 0.418183 | 2.1:+13478225 | MS.gene35816:intron |
CGCAGTAATTTGGTAGGAAT+GGG | 0.418887 | 2.1:+13483687 | MS.gene35816:CDS |
CTTGTCAAGTTTCCCTTGAA+AGG | 0.419364 | 2.1:-13477049 | None:intergenic |
GTCGCTGGATGGGGTGTTGG+GGG | 0.419966 | 2.1:+13478336 | MS.gene35816:CDS |
AATACGGCAGTGGAAGTTCC+AGG | 0.422241 | 2.1:+13483478 | MS.gene35816:CDS |
AGGGCATGCCACCATTGTGC+TGG | 0.422305 | 2.1:+13483446 | MS.gene35816:CDS |
CTTGTTTACAATTCGTATGT+TGG | 0.422861 | 2.1:-13482889 | None:intergenic |
TCCCATACAACTATGATTGA+TGG | 0.423307 | 2.1:+13478306 | MS.gene35816:CDS |
AAATTCACCACCACCAGGCT+TGG | 0.423386 | 2.1:-13477077 | None:intergenic |
CAAACCCAAGTGTTATGCTT+GGG | 0.423891 | 2.1:+13480170 | MS.gene35816:CDS |
CTCTATCCTGACAGTGTGGT+TGG | 0.425659 | 2.1:+13478276 | MS.gene35816:CDS |
AAGACTGTGCACATTCCAAC+AGG | 0.426168 | 2.1:+13482936 | MS.gene35816:CDS |
TGATCAACAACTAGATCAAC+AGG | 0.426916 | 2.1:-13477942 | None:intergenic |
TACTGTCACCAAAATTCAAC+AGG | 0.429302 | 2.1:-13482716 | None:intergenic |
TTTCCACCCCACGCTGCATA+AGG | 0.429814 | 2.1:-13482800 | None:intergenic |
CTATCTTGCCTCCCCTCCAT+TGG | 0.433525 | 2.1:+13480947 | MS.gene35816:CDS |
CCGGGTAACACCATGCTCAT+AGG | 0.436873 | 2.1:-13478584 | None:intergenic |
ACGGGCGGCGTTAGCGGCGG+CGG | 0.437741 | 2.1:-13475855 | None:intergenic |
AGCCAAGGGTCCCATGCTAT+TGG | 0.439651 | 2.1:+13483509 | MS.gene35816:CDS |
CTGCTGAGAAGCTGTATTCA+TGG | 0.439794 | 2.1:+13482601 | MS.gene35816:CDS |
ACCAAAATTCAACAGGCAAT+AGG | 0.439902 | 2.1:-13482709 | None:intergenic |
TCGCAGTAATTTGGTAGGAA+TGG | 0.441035 | 2.1:+13483686 | MS.gene35816:CDS |
TGGGCTTGGAGTCGCTGGAT+GGG | 0.441530 | 2.1:+13478326 | MS.gene35816:CDS |
TCGTGAATGTATGTTGAGTT+GGG | 0.443228 | 2.1:-13482627 | None:intergenic |
GGCTGGTCTTGTTGCAAAGA+AGG | 0.443338 | 2.1:+13480192 | MS.gene35816:CDS |
AATATGCTCGTTGTTCCTCC+TGG | 0.443434 | 2.1:+13478083 | MS.gene35816:CDS |
GACTTTGAAAAGGAGCCGTT+AGG | 0.444702 | 2.1:+13482326 | MS.gene35816:CDS |
ATCTGAGGACGGAGAGAGAC+AGG | 0.445324 | 2.1:-13475920 | None:intergenic |
AAGCTATTGAACGGCGAAGT+TGG | 0.446095 | 2.1:+13482909 | MS.gene35816:CDS |
CCATCGGTTAACGGTGGAAC+GGG | 0.447523 | 2.1:-13475873 | None:intergenic |
GGCGCATGACTTAGGTTTGA+AGG | 0.447741 | 2.1:+13480213 | MS.gene35816:CDS |
GCAGTGGAAGTTCCAGGGAT+TGG | 0.448099 | 2.1:+13483484 | MS.gene35816:CDS |
AGCTGGTGAAAATCCTTTCA+AGG | 0.448607 | 2.1:+13477036 | MS.gene35816:intron |
GCAAAGAAGGCGCATGACTT+AGG | 0.450258 | 2.1:+13480205 | MS.gene35816:CDS |
CAATGATAGAGGCCTATCTC+AGG | 0.454653 | 2.1:+13479039 | MS.gene35816:CDS |
TCTATCCTGACAGTGTGGTT+GGG | 0.455891 | 2.1:+13478277 | MS.gene35816:CDS |
GGGCTTGGAGTCGCTGGATG+GGG | 0.456615 | 2.1:+13478327 | MS.gene35816:CDS |
CTCGTGAATGTATGTTGAGT+TGG | 0.457019 | 2.1:-13482628 | None:intergenic |
GTTGCAAAATTCGATTTCCA+TGG | 0.457117 | 2.1:+13480082 | MS.gene35816:CDS |
ATGGGCTTGGAGTCGCTGGA+TGG | 0.459040 | 2.1:+13478325 | MS.gene35816:CDS |
TAGCATCTGCTGTGCTGTCC+GGG | 0.459362 | 2.1:+13480880 | MS.gene35816:CDS |
GGTGAGGATGCTGACACCTT+GGG | 0.460474 | 2.1:+13483735 | MS.gene35816:CDS |
CAAGCCAAATCAACAACAGC+TGG | 0.461130 | 2.1:-13477598 | None:intergenic |
TCACGAGCCTCCATACTTCA+AGG | 0.461990 | 2.1:+13482644 | MS.gene35816:CDS |
CCACATGTATTGGCAATTCA+GGG | 0.462224 | 2.1:+13480661 | MS.gene35816:CDS |
TTTGCTCCAGGCAATGGTAT+GGG | 0.463247 | 2.1:+13478801 | MS.gene35816:intron |
TGGTGTTACCCGGTGTTGTT+GGG | 0.465294 | 2.1:+13478594 | MS.gene35816:CDS |
CTTGTAATTCGTTCCACATA+GGG | 0.465949 | 2.1:-13482575 | None:intergenic |
GCCTGCTCGTGTTCTTCTCC+AGG | 0.467838 | 2.1:+13477460 | MS.gene35816:CDS |
CCATCCTTTCCTGTCCCTAA+CGG | 0.468008 | 2.1:-13482341 | None:intergenic |
CTCACCAGATTTGAAGCAAA+GGG | 0.468492 | 2.1:-13483718 | None:intergenic |
GTATTCTATCAGAATTCTCC+TGG | 0.469390 | 2.1:+13477331 | MS.gene35816:CDS |
TGATAACAAAGTGGGATTCA+AGG | 0.470540 | 2.1:+13479413 | MS.gene35816:CDS |
GGCTTATGCTCTTGCTGGCA+CGG | 0.470773 | 2.1:+13480974 | MS.gene35816:CDS |
GCTGACACCTTGGGATTGAC+TGG | 0.471027 | 2.1:+13483744 | MS.gene35816:CDS |
AGGAGACATATTGGCAATAG+TGG | 0.471422 | 2.1:-13478847 | None:intergenic |
TACCAATAGCATGGGACCCT+TGG | 0.471976 | 2.1:-13483511 | None:intergenic |
ATGGATCCTCCTGGACCTCA+TGG | 0.472294 | 2.1:+13482675 | MS.gene35816:CDS |
CAGTTGTGACGGTGACATCT+TGG | 0.472921 | 2.1:-13483821 | None:intergenic |
AGAACACGAGCAGGCTTGAA+AGG | 0.473996 | 2.1:-13477452 | None:intergenic |
ATGGTCATGTCCTTGAAGTA+TGG | 0.475691 | 2.1:-13482654 | None:intergenic |
GACAGAGATACAAGGCTTCA+GGG | 0.477290 | 2.1:+13483427 | MS.gene35816:intron |
ACAACTATGATTGATGGGCT+TGG | 0.477538 | 2.1:+13478312 | MS.gene35816:CDS |
TTCGGCTGTACCACATGTAT+TGG | 0.477825 | 2.1:+13480651 | MS.gene35816:CDS |
TCAGTCCCAACCACACTGTC+AGG | 0.479411 | 2.1:-13478282 | None:intergenic |
GAAAAGGAGCCGTTAGGGAC+AGG | 0.481014 | 2.1:+13482332 | MS.gene35816:CDS |
CACAATACCTTATGCAGCGT+GGG | 0.484741 | 2.1:+13482793 | MS.gene35816:CDS |
GCACTCGGCCCTCAAAATTA+CGG | 0.485012 | 2.1:-13480905 | None:intergenic |
AATGACTTCACTTCTTAATG+AGG | 0.487043 | 2.1:-13484118 | None:intergenic |
GCATACTTCCCTATGTCATC+AGG | 0.488632 | 2.1:+13484093 | MS.gene35816:CDS |
GAGGAACAACGAGCATATTA+CGG | 0.489483 | 2.1:-13478079 | None:intergenic |
TGCATAAGGTATTGTGCAGC+AGG | 0.491012 | 2.1:-13482786 | None:intergenic |
GAAGCAGAGGCAGCAATGCT+TGG | 0.491053 | 2.1:+13478363 | MS.gene35816:CDS |
GCGGGAGATCGAACGGGAGA+AGG | 0.492838 | 2.1:-13475821 | None:intergenic |
TGGCAAGAATGTTTACTTGA+GGG | 0.494069 | 2.1:+13482361 | MS.gene35816:CDS |
AAGGTCAGAGAATGCAGTGC+AGG | 0.494971 | 2.1:+13477986 | MS.gene35816:CDS |
CCTTTGCTTCAAATCTGGTG+AGG | 0.494973 | 2.1:+13483719 | MS.gene35816:CDS |
ACATAAAGCTTCTCCCCTGT+TGG | 0.495420 | 2.1:-13482951 | None:intergenic |
TTCCAGGGATTGGGCAGCCA+AGG | 0.496253 | 2.1:+13483494 | MS.gene35816:CDS |
TCAGACTTCATTTCTTTCAA+AGG | 0.497520 | 2.1:-13479375 | None:intergenic |
GCCGTGACTCCATCGGTTAA+CGG | 0.498431 | 2.1:-13475882 | None:intergenic |
ATTGATGGGCTTGGAGTCGC+TGG | 0.499266 | 2.1:+13478321 | MS.gene35816:CDS |
TTCTAATAAGATCAATCCTC+TGG | 0.501652 | 2.1:+13477654 | MS.gene35816:CDS |
CCCATCAATCATAGTTGTAT+GGG | 0.501899 | 2.1:-13478307 | None:intergenic |
TGTCAGGCAACACGTTGGAT+TGG | 0.501963 | 2.1:-13482515 | None:intergenic |
CACTTCTTCCAGTTAGCTTG+AGG | 0.504054 | 2.1:-13478923 | None:intergenic |
GCATGCGTGATGCTATGAAT+AGG | 0.504170 | 2.1:+13477620 | MS.gene35816:CDS |
AGAGGCAGCAATGCTTGGCC+AGG | 0.505091 | 2.1:+13478368 | MS.gene35816:CDS |
TGGTGAGGATGCTGACACCT+TGG | 0.505357 | 2.1:+13483734 | MS.gene35816:CDS |
TCCTTCACACCATGAGGTCC+AGG | 0.505579 | 2.1:-13482684 | None:intergenic |
GGTTGACATTGACTTTGAAA+AGG | 0.506476 | 2.1:+13482316 | MS.gene35816:intron |
GCAATGATGAAGTTATGTCT+AGG | 0.507216 | 2.1:+13482856 | MS.gene35816:CDS |
TATGTACTTCTGAACATGTC+AGG | 0.508691 | 2.1:-13482531 | None:intergenic |
TGAATTATCGTTGGCTGACA+GGG | 0.508821 | 2.1:+13478824 | MS.gene35816:CDS |
CCAAGTGTTATGCTTGGGGC+TGG | 0.508975 | 2.1:+13480175 | MS.gene35816:CDS |
AATTCACCACCACCAGGCTT+GGG | 0.510953 | 2.1:-13477076 | None:intergenic |
TGTGACGGTGACATCTTGGC+CGG | 0.511650 | 2.1:-13483817 | None:intergenic |
GCAGCGTGGGGTGGAAAAGA+AGG | 0.512014 | 2.1:+13482806 | MS.gene35816:CDS |
CACCTGTGCAATTTCTTCAG+TGG | 0.512662 | 2.1:-13482396 | None:intergenic |
TTAGGAAACATGGTGTTGTA+GGG | 0.512869 | 2.1:+13478687 | MS.gene35816:CDS |
TCCTTGTTAATATTTCCAGC+TGG | 0.513378 | 2.1:-13482759 | None:intergenic |
CGATGATACTGTTCGATGAA+AGG | 0.513427 | 2.1:-13475956 | None:intergenic |
AGGAGAATTCTGATAGAATA+CGG | 0.514211 | 2.1:-13477329 | None:intergenic |
CCCATACAACTATGATTGAT+GGG | 0.514361 | 2.1:+13478307 | MS.gene35816:CDS |
GTGAAAGCGGGAGATCGAAC+GGG | 0.517009 | 2.1:-13475827 | None:intergenic |
AAAATCAGCGAGATAAAGCC+CGG | 0.517821 | 2.1:+13483798 | MS.gene35816:CDS |
AATTACGAATGGCAGATTCC+AGG | 0.519101 | 2.1:-13477349 | None:intergenic |
CAATGATGAAGTTATGTCTA+GGG | 0.519169 | 2.1:+13482857 | MS.gene35816:CDS |
CATGAATACAGCTTCTCAGC+AGG | 0.519200 | 2.1:-13482600 | None:intergenic |
GAAGAGAAGGTTCTAGAAAG+AGG | 0.522793 | 2.1:-13475785 | None:intergenic |
TCTTGTCTTGATAACAAAGT+GGG | 0.524984 | 2.1:+13479405 | MS.gene35816:CDS |
ACTGATCACATTTCTCCAGC+TGG | 0.526190 | 2.1:+13482744 | MS.gene35816:CDS |
ACTTGTAATTCGTTCCACAT+AGG | 0.526220 | 2.1:-13482576 | None:intergenic |
GGAACGGGCGGCGTTAGCGG+CGG | 0.527362 | 2.1:-13475858 | None:intergenic |
ATCGGAGATTATACCGGAAG+TGG | 0.530020 | 2.1:-13475987 | None:intergenic |
ACTTTGAAAAGGAGCCGTTA+GGG | 0.531710 | 2.1:+13482327 | MS.gene35816:CDS |
ATTGTTTGTCGACTATAATG+AGG | 0.532842 | 2.1:+13479070 | MS.gene35816:CDS |
TTGACAAGTCTTCCCAAGCC+TGG | 0.533973 | 2.1:+13477064 | MS.gene35816:CDS |
GAACACGAGCAGGCTTGAAA+GGG | 0.534295 | 2.1:-13477451 | None:intergenic |
TTACTAAGGGTAACCCTATG+TGG | 0.535614 | 2.1:+13482562 | MS.gene35816:CDS |
GCGGCGGATGAGGTGAAAGC+GGG | 0.536134 | 2.1:-13475839 | None:intergenic |
TCAAACCCAAGTGTTATGCT+TGG | 0.536303 | 2.1:+13480169 | MS.gene35816:CDS |
GAAGTCGAACCATGTATCTC+AGG | 0.536379 | 2.1:+13479234 | MS.gene35816:CDS |
GAATTGGAGTACTTCAACCA+TGG | 0.536629 | 2.1:+13484068 | MS.gene35816:CDS |
AATGAGGTTCCTGATGACAT+AGG | 0.539122 | 2.1:-13484102 | None:intergenic |
ATACCTCTGAAGTAGATACT+TGG | 0.540471 | 2.1:-13480448 | None:intergenic |
TCCTGAATATGGAGCAACCA+TGG | 0.542223 | 2.1:+13478866 | MS.gene35816:CDS |
TGTGCAATTTCTTCAGTGGA+TGG | 0.544671 | 2.1:-13482392 | None:intergenic |
CATAGGGAAGTATGCCTCCA+TGG | 0.545905 | 2.1:-13484085 | None:intergenic |
GTGACGGTGACATCTTGGCC+GGG | 0.548359 | 2.1:-13483816 | None:intergenic |
TCCTGGACCTCATGGTGTGA+AGG | 0.548498 | 2.1:+13482683 | MS.gene35816:CDS |
CCCGTTCCACCGTTAACCGA+TGG | 0.550117 | 2.1:+13475873 | MS.gene35816:CDS |
GTCACCGTCACAACTGATAC+CGG | 0.550262 | 2.1:+13483828 | MS.gene35816:CDS |
TTAGCTCAGCTGGCTGCCCA+TGG | 0.551057 | 2.1:-13480099 | None:intergenic |
TGTTGAAAAGATTATTGACT+GGG | 0.551841 | 2.1:+13477400 | MS.gene35816:CDS |
AAGATAGTTAGCGCGTGTCA+AGG | 0.552401 | 2.1:-13480931 | None:intergenic |
TGCTGAGAAGCTGTATTCAT+GGG | 0.552702 | 2.1:+13482602 | MS.gene35816:CDS |
GTGCTGGCTGGAGCTGAATA+CGG | 0.552786 | 2.1:+13483462 | MS.gene35816:CDS |
AGTCTTCCCAAGCCTGGTGG+TGG | 0.553048 | 2.1:+13477070 | MS.gene35816:CDS |
TCATGGCAGACCTCATGATC+GGG | 0.553602 | 2.1:+13479350 | MS.gene35816:intron |
ATGAGGTTCCTGATGACATA+GGG | 0.554400 | 2.1:-13484101 | None:intergenic |
CTCATGGCAGACCTCATGAT+CGG | 0.554707 | 2.1:+13479349 | MS.gene35816:intron |
AGAGCATAAGCCACAACCAA+TGG | 0.554884 | 2.1:-13480963 | None:intergenic |
CCAGCCCCAAGCATAACACT+TGG | 0.556722 | 2.1:-13480175 | None:intergenic |
GGTGAAAGCGGGAGATCGAA+CGG | 0.559834 | 2.1:-13475828 | None:intergenic |
ACGAGAGAGAGGTGAAGAGA+AGG | 0.559856 | 2.1:-13475798 | None:intergenic |
ATGTTGAAAAGATTATTGAC+TGG | 0.559971 | 2.1:+13477399 | MS.gene35816:CDS |
AACTTGAACCCAACAACACC+GGG | 0.563808 | 2.1:-13478602 | None:intergenic |
ACCTGGAGAAGAACACGAGC+AGG | 0.566281 | 2.1:-13477461 | None:intergenic |
ATGAGGTCCAGGAGGATCCA+TGG | 0.567055 | 2.1:-13482673 | None:intergenic |
GAAATTGTCACAATTACGAA+TGG | 0.569548 | 2.1:-13477360 | None:intergenic |
GACATGACCATGGATCCTCC+TGG | 0.570495 | 2.1:+13482666 | MS.gene35816:CDS |
CAGTTCAAGTTGATGTAGCA+AGG | 0.570690 | 2.1:+13477967 | MS.gene35816:CDS |
CCTATGAGCATGGTGTTACC+CGG | 0.571735 | 2.1:+13478584 | MS.gene35816:CDS |
AATGTAGGTGGCAATGATAG+AGG | 0.571862 | 2.1:+13479028 | MS.gene35816:intron |
TCTCATCTGACAGAGATACA+AGG | 0.572796 | 2.1:+13483419 | MS.gene35816:intron |
TTGCAAAATTCGATTTCCAT+GGG | 0.572852 | 2.1:+13480083 | MS.gene35816:CDS |
CGTGATGCTATGAATAGGCT+TGG | 0.573806 | 2.1:+13477625 | MS.gene35816:CDS |
TTTCCAAATTCACCACCACC+AGG | 0.574063 | 2.1:-13477082 | None:intergenic |
TGGTGTTACAGCAACTGACT+TGG | 0.574164 | 2.1:+13478643 | MS.gene35816:CDS |
CCTGAATATGGAGCAACCAT+GGG | 0.574382 | 2.1:+13478867 | MS.gene35816:CDS |
AAAGGACGCCGTGACTCCAT+CGG | 0.575808 | 2.1:-13475889 | None:intergenic |
GGAGCGACAGCTCTGATCTG+AGG | 0.576907 | 2.1:-13475935 | None:intergenic |
ATACCTTATGCAGCGTGGGG+TGG | 0.578429 | 2.1:+13482797 | MS.gene35816:CDS |
GCTGGAGCTGAATACGGCAG+TGG | 0.580134 | 2.1:+13483468 | MS.gene35816:CDS |
TTGGAATGTGCACAGTCTTG+GGG | 0.580481 | 2.1:-13482932 | None:intergenic |
CCTCACCAGATTTGAAGCAA+AGG | 0.584378 | 2.1:-13483719 | None:intergenic |
ATGGCAAGAATGTTTACTTG+AGG | 0.585412 | 2.1:+13482360 | MS.gene35816:CDS |
AACTCTTATGGAAGCCGTCG+TGG | 0.585544 | 2.1:+13482834 | MS.gene35816:CDS |
ATTCATCGCAGTAATTTGGT+AGG | 0.585715 | 2.1:+13483681 | MS.gene35816:CDS |
ATCCACTGAAGAAATTGCAC+AGG | 0.586485 | 2.1:+13482394 | MS.gene35816:CDS |
AGATAGTTAGCGCGTGTCAA+GGG | 0.586653 | 2.1:-13480930 | None:intergenic |
GGAGGGACTTACCAATAGCA+TGG | 0.589213 | 2.1:-13483520 | None:intergenic |
ACCGTTAACCGATGGAGTCA+CGG | 0.589291 | 2.1:+13475881 | MS.gene35816:CDS |
ACGGGAGAAGGACGAGAGAG+AGG | 0.589513 | 2.1:-13475809 | None:intergenic |
TTCTTGTCTTGATAACAAAG+TGG | 0.591441 | 2.1:+13479404 | MS.gene35816:CDS |
GCATAAGCCACAACCAATGG+AGG | 0.592659 | 2.1:-13480960 | None:intergenic |
TCCAGGGATTGGGCAGCCAA+GGG | 0.592975 | 2.1:+13483495 | MS.gene35816:CDS |
TTCAAAGGTACCCGATCATG+AGG | 0.595563 | 2.1:-13479360 | None:intergenic |
CAGCCAGCTGAGCTAAAACA+TGG | 0.598980 | 2.1:+13480106 | MS.gene35816:CDS |
TTACCAAGTATCTACTTCAG+AGG | 0.599229 | 2.1:+13480445 | MS.gene35816:CDS |
CAACTTGAACCCAACAACAC+CGG | 0.601241 | 2.1:-13478603 | None:intergenic |
TCCATCGGTTAACGGTGGAA+CGG | 0.603600 | 2.1:-13475874 | None:intergenic |
CCGTTAGGGACAGGAAAGGA+TGG | 0.603630 | 2.1:+13482341 | MS.gene35816:CDS |
TGGTTCTGGTATAGTACACC+AGG | 0.603672 | 2.1:+13478103 | MS.gene35816:CDS |
CGACAGCTCTGATCTGAGGA+CGG | 0.603821 | 2.1:-13475931 | None:intergenic |
GCTGGTGAAAATCCTTTCAA+GGG | 0.608551 | 2.1:+13477037 | MS.gene35816:intron |
CCCTGAATTGCCAATACATG+TGG | 0.612505 | 2.1:-13480661 | None:intergenic |
TTGGTAACAACTCCAGAACC+AGG | 0.614921 | 2.1:-13480429 | None:intergenic |
AAACCCAAGTGTTATGCTTG+GGG | 0.616138 | 2.1:+13480171 | MS.gene35816:CDS |
ACAAGTCTTCCCAAGCCTGG+TGG | 0.616274 | 2.1:+13477067 | MS.gene35816:CDS |
ACATATGAAGCTATTACTAA+GGG | 0.617409 | 2.1:+13482549 | MS.gene35816:CDS |
TCGGTTAACGGTGGAACGGG+CGG | 0.617594 | 2.1:-13475870 | None:intergenic |
CGCGTGTCAAGGGATGCACT+CGG | 0.620384 | 2.1:-13480920 | None:intergenic |
ACACAAATTCTTAGGAAACA+TGG | 0.621487 | 2.1:+13478677 | MS.gene35816:CDS |
GCACAATACCTTATGCAGCG+TGG | 0.623152 | 2.1:+13482792 | MS.gene35816:CDS |
GAGGGACTTACCAATAGCAT+GGG | 0.623483 | 2.1:-13483519 | None:intergenic |
GCTTGAGTTCCAGAGAAACA+AGG | 0.624830 | 2.1:+13478019 | MS.gene35816:CDS |
AGCCACAACCAATGGAGGGG+AGG | 0.625371 | 2.1:-13480955 | None:intergenic |
CATAAGCCACAACCAATGGA+GGG | 0.625671 | 2.1:-13480959 | None:intergenic |
AGTTCCAGAGAAACAAGGAG+AGG | 0.626993 | 2.1:+13478024 | MS.gene35816:CDS |
GTCATGTCCTTGAAGTATGG+AGG | 0.629601 | 2.1:-13482651 | None:intergenic |
GGCGGCGGATGAGGTGAAAG+CGG | 0.639012 | 2.1:-13475840 | None:intergenic |
GAGAGACAGGAGATCTCCAA+AGG | 0.639602 | 2.1:-13475907 | None:intergenic |
AATGATAGAGGCCTATCTCA+GGG | 0.640303 | 2.1:+13479040 | MS.gene35816:CDS |
TTCATGACCAGTCAATCCCA+AGG | 0.643471 | 2.1:-13483751 | None:intergenic |
GAATAAGCTCTGTCTTGTTG+AGG | 0.645207 | 2.1:-13479186 | None:intergenic |
CGTGAATGTATGTTGAGTTG+GGG | 0.645367 | 2.1:-13482626 | None:intergenic |
ATTGTAAACAAGCTATTGAA+CGG | 0.646245 | 2.1:+13482900 | MS.gene35816:CDS |
ATAAGCCACAACCAATGGAG+GGG | 0.646717 | 2.1:-13480958 | None:intergenic |
CATGTATCTCAGGACCAAAG+AGG | 0.648338 | 2.1:+13479244 | MS.gene35816:CDS |
ATTCTCGGATCATTGAGAGA+AGG | 0.650901 | 2.1:-13477118 | None:intergenic |
CAGCCCCAAGCATAACACTT+GGG | 0.651191 | 2.1:-13480174 | None:intergenic |
TCGGATCATTGAGAGAAGGA+AGG | 0.651512 | 2.1:-13477114 | None:intergenic |
TCCAGCTGGAAATATTAACA+AGG | 0.652532 | 2.1:+13482758 | MS.gene35816:CDS |
AGCTCCAGCCAGCACAATGG+TGG | 0.653466 | 2.1:-13483454 | None:intergenic |
AAGCCAAATCAACAACAGCT+GGG | 0.656345 | 2.1:-13477597 | None:intergenic |
TGGTATGGGTGAATTATCGT+TGG | 0.657380 | 2.1:+13478815 | MS.gene35816:CDS |
AATGATGAAGTTATGTCTAG+GGG | 0.661576 | 2.1:+13482858 | MS.gene35816:CDS |
ATACTTCAAGGACATGACCA+TGG | 0.661807 | 2.1:+13482656 | MS.gene35816:CDS |
ATACGGCAGTGGAAGTTCCA+GGG | 0.662339 | 2.1:+13483479 | MS.gene35816:CDS |
TGGTGTACTATACCAGAACC+AGG | 0.663464 | 2.1:-13478101 | None:intergenic |
CACAGCTCGCTTTGACACAG+AGG | 0.664298 | 2.1:+13483866 | MS.gene35816:CDS |
CACATGTATTGGCAATTCAG+GGG | 0.665307 | 2.1:+13480662 | MS.gene35816:CDS |
GAGCATATTACGGAAAGCAG+TGG | 0.665568 | 2.1:-13478069 | None:intergenic |
GAACATGTCAGGCAACACGT+TGG | 0.666023 | 2.1:-13482520 | None:intergenic |
TAACTTCATCATTGCCACGA+CGG | 0.672661 | 2.1:-13482848 | None:intergenic |
TTCAGCTCCAGCCAGCACAA+TGG | 0.672803 | 2.1:-13483457 | None:intergenic |
TGTTGCTCTGAGAGAAGCCA+TGG | 0.672975 | 2.1:-13475747 | None:intergenic |
ATCTACAGGGAAGAAACCCA+TGG | 0.674382 | 2.1:-13478883 | None:intergenic |
GTTACTCTATCCTGACAGTG+TGG | 0.677429 | 2.1:+13478272 | MS.gene35816:CDS |
AGACTGTGCACATTCCAACA+GGG | 0.682191 | 2.1:+13482937 | MS.gene35816:CDS |
GACTGTGCACATTCCAACAG+GGG | 0.683171 | 2.1:+13482938 | MS.gene35816:CDS |
TAGGCATCCTTCACACCATG+AGG | 0.684287 | 2.1:-13482690 | None:intergenic |
GGAGCCGTTAGGGACAGGAA+AGG | 0.690362 | 2.1:+13482337 | MS.gene35816:CDS |
TTGTCTGGAAAATTGCGCAA+TGG | 0.696960 | 2.1:+13478623 | MS.gene35816:CDS |
TTCACACCATGAGGTCCAGG+AGG | 0.697455 | 2.1:-13482681 | None:intergenic |
ACAATACCTTATGCAGCGTG+GGG | 0.701770 | 2.1:+13482794 | MS.gene35816:CDS |
TCACCAGATTTGAAGCAAAG+GGG | 0.711190 | 2.1:-13483717 | None:intergenic |
ATAATGACAGCCTATGAGCA+TGG | 0.713309 | 2.1:+13478574 | MS.gene35816:intron |
GTGACTCCATCGGTTAACGG+TGG | 0.718292 | 2.1:-13475879 | None:intergenic |
TTGGAGTACTTCAACCATGG+AGG | 0.720887 | 2.1:+13484071 | MS.gene35816:CDS |
GTAATGTTACATGATCTACA+GGG | 0.772666 | 2.1:-13478896 | None:intergenic |
TGTACTATACCAGAACCAGG+AGG | 0.788384 | 2.1:-13478098 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 13475749 | 13484133 | 13475749 | ID=MS.gene35816 |
chr2.1 | mRNA | 13475749 | 13484133 | 13475749 | ID=MS.gene35816.t1;Parent=MS.gene35816 |
chr2.1 | exon | 13475749 | 13475995 | 13475749 | ID=MS.gene35816.t1.exon1;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13475749 | 13475995 | 13475749 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13477038 | 13477142 | 13477038 | ID=MS.gene35816.t1.exon2;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13477038 | 13477142 | 13477038 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13477321 | 13477481 | 13477321 | ID=MS.gene35816.t1.exon3;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13477321 | 13477481 | 13477321 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13477583 | 13477675 | 13477583 | ID=MS.gene35816.t1.exon4;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13477583 | 13477675 | 13477583 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13477939 | 13478124 | 13477939 | ID=MS.gene35816.t1.exon5;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13477939 | 13478124 | 13477939 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13478228 | 13478389 | 13478228 | ID=MS.gene35816.t1.exon6;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13478228 | 13478389 | 13478228 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13478584 | 13478728 | 13478584 | ID=MS.gene35816.t1.exon7;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13478584 | 13478728 | 13478584 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13478811 | 13478953 | 13478811 | ID=MS.gene35816.t1.exon8;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13478811 | 13478953 | 13478811 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13479035 | 13479091 | 13479035 | ID=MS.gene35816.t1.exon9;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13479035 | 13479091 | 13479035 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13479186 | 13479265 | 13479186 | ID=MS.gene35816.t1.exon10;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13479186 | 13479265 | 13479186 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13479359 | 13479434 | 13479359 | ID=MS.gene35816.t1.exon11;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13479359 | 13479434 | 13479359 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13480049 | 13480234 | 13480049 | ID=MS.gene35816.t1.exon12;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13480049 | 13480234 | 13480049 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13480399 | 13480466 | 13480399 | ID=MS.gene35816.t1.exon13;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13480399 | 13480466 | 13480399 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13480605 | 13480723 | 13480605 | ID=MS.gene35816.t1.exon14;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13480605 | 13480723 | 13480605 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13480874 | 13480995 | 13480874 | ID=MS.gene35816.t1.exon15;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13480874 | 13480995 | 13480874 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13482317 | 13482415 | 13482317 | ID=MS.gene35816.t1.exon16;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13482317 | 13482415 | 13482317 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13482510 | 13482989 | 13482510 | ID=MS.gene35816.t1.exon17;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13482510 | 13482989 | 13482510 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13483432 | 13483530 | 13483432 | ID=MS.gene35816.t1.exon18;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13483432 | 13483530 | 13483432 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13483645 | 13483887 | 13483645 | ID=MS.gene35816.t1.exon19;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13483645 | 13483887 | 13483645 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
chr2.1 | exon | 13484065 | 13484133 | 13484065 | ID=MS.gene35816.t1.exon20;Parent=MS.gene35816.t1 |
chr2.1 | CDS | 13484065 | 13484133 | 13484065 | ID=cds.MS.gene35816.t1;Parent=MS.gene35816.t1 |
Gene Sequence |
Protein sequence |