Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011805.t1 | XP_013457413.1 | 98.6 | 557 | 7 | 1 | 1 | 557 | 1 | 556 | 0.00E+00 | 1117.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011805.t1 | Q84WV8 | 82.2 | 552 | 94 | 2 | 9 | 557 | 6 | 556 | 5.7e-273 | 941.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011805.t1 | Q6XQM5 | 98.6 | 557 | 7 | 1 | 1 | 557 | 1 | 556 | 0.0e+00 | 1117.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011805 | MS.gene026607 | PPI |
| MS.gene041065 | MS.gene011805 | PPI |
| MS.gene011805 | MS.gene064339 | PPI |
| MS.gene027407 | MS.gene011805 | PPI |
| MS.gene011805 | MS.gene83132 | PPI |
| MS.gene35817 | MS.gene011805 | PPI |
| MS.gene56790 | MS.gene011805 | PPI |
| MS.gene034333 | MS.gene011805 | PPI |
| MS.gene59143 | MS.gene011805 | PPI |
| MS.gene35816 | MS.gene011805 | PPI |
| MS.gene011805 | MS.gene90508 | PPI |
| MS.gene35820 | MS.gene011805 | PPI |
| MS.gene027406 | MS.gene011805 | PPI |
| MS.gene054016 | MS.gene011805 | PPI |
| MS.gene054017 | MS.gene011805 | PPI |
| MS.gene95558 | MS.gene011805 | PPI |
| MS.gene011805 | MS.gene62990 | PPI |
| MS.gene87625 | MS.gene011805 | PPI |
| MS.gene99212 | MS.gene011805 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011805.t1 | MTR_4g094805 | 98.387 | 558 | 8 | 1 | 1 | 558 | 1 | 557 | 0.0 | 1138 |
| MS.gene011805.t1 | MTR_5g017050 | 84.116 | 554 | 79 | 2 | 14 | 558 | 3 | 556 | 0.0 | 968 |
| MS.gene011805.t1 | MTR_4g094805 | 98.361 | 427 | 6 | 1 | 1 | 427 | 1 | 426 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011805.t1 | AT2G23420 | 82.047 | 557 | 90 | 3 | 11 | 558 | 2 | 557 | 0.0 | 956 |
| MS.gene011805.t1 | AT4G36940 | 81.802 | 555 | 97 | 2 | 7 | 558 | 6 | 559 | 0.0 | 953 |
| MS.gene011805.t1 | AT2G23420 | 81.426 | 533 | 89 | 3 | 11 | 534 | 2 | 533 | 0.0 | 907 |
Find 183 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATTAGCTCTTGGTGATTT+AGG | 0.106417 | 8.1:+26821295 | MS.gene011805:CDS |
| TCACCATGGCTTATGCTTAT+TGG | 0.154867 | 8.1:+26815162 | MS.gene011805:CDS |
| GTTGCAGCGGGGAAGTTATT+TGG | 0.195350 | 8.1:+26818659 | MS.gene011805:CDS |
| CGCTCCATTGAGAACGAATT+CGG | 0.203587 | 8.1:+26822135 | MS.gene011805:CDS |
| CATTAGCTCTTGGTGATTTA+GGG | 0.235654 | 8.1:+26821296 | MS.gene011805:CDS |
| TGTTACTGGCCTGGGAATTT+AGG | 0.238459 | 8.1:+26825092 | MS.gene011805:CDS |
| TCCAAAACTTTACTTGAGTT+TGG | 0.243855 | 8.1:+26817702 | MS.gene011805:CDS |
| TCCAAACTCAAGTAAAGTTT+TGG | 0.267643 | 8.1:-26817703 | None:intergenic |
| GTACTGAATATAAGTACTTC+TGG | 0.279435 | 8.1:+26826091 | MS.gene011805:intron |
| CCCACTTTGCAGTTGTTAAA+TGG | 0.287364 | 8.1:+26820546 | MS.gene011805:intron |
| GAATTCGGGGTGCCTGGATT+TGG | 0.287908 | 8.1:+26822150 | MS.gene011805:CDS |
| GAAGCTATCCACTAATTTCT+TGG | 0.289489 | 8.1:-26827579 | None:intergenic |
| ACTTCGAACGGTTCCATTCA+TGG | 0.299967 | 8.1:+26815092 | MS.gene011805:CDS |
| ACTCTAAGCAAGGGTATCTT+AGG | 0.302222 | 8.1:-26817473 | None:intergenic |
| AGGAGCTTCTAAGGTGTTAC+TGG | 0.307703 | 8.1:+26825078 | MS.gene011805:CDS |
| TATAACTTCCTAACCTTGTA+TGG | 0.319927 | 8.1:-26825640 | None:intergenic |
| GCATTCTTTGACTATCTTAG+AGG | 0.342075 | 8.1:+26817395 | MS.gene011805:CDS |
| TGCTTTCGTTAGCTCATATA+TGG | 0.348844 | 8.1:+26818709 | MS.gene011805:CDS |
| GAGGTTGATGCCTTCGGAAT+TGG | 0.352036 | 8.1:+26824146 | MS.gene011805:CDS |
| TTTCTTTCCAATCCTTGTAA+TGG | 0.352207 | 8.1:-26827510 | None:intergenic |
| AATTCGGGGTGCCTGGATTT+GGG | 0.352501 | 8.1:+26822151 | MS.gene011805:CDS |
| TGTTCAGGCTGTTCAATTGC+TGG | 0.353369 | 8.1:+26817599 | MS.gene011805:intron |
| GCGTCAAAGTATTGTTATAT+TGG | 0.360045 | 8.1:+26817849 | MS.gene011805:CDS |
| GCTCCATTGAGAACGAATTC+GGG | 0.365931 | 8.1:+26822136 | MS.gene011805:CDS |
| GCAAGGCATCGCAAAGTTGC+TGG | 0.367431 | 8.1:+26817675 | MS.gene011805:CDS |
| AACATGGCTGAGCAAAATTC+AGG | 0.378703 | 8.1:+26818970 | MS.gene011805:CDS |
| CAAAGCAGGTGGCATTAGAT+TGG | 0.381168 | 8.1:+26822065 | MS.gene011805:CDS |
| AAGCGATCCTATAGGTTGTA+TGG | 0.389033 | 8.1:+26824379 | MS.gene011805:CDS |
| GGTGGCATTAGATTGGATTC+TGG | 0.389846 | 8.1:+26822072 | MS.gene011805:CDS |
| ATACCCTTGCTTAGAGTTGA+AGG | 0.390123 | 8.1:+26817479 | MS.gene011805:CDS |
| TTCTAAGGTGTTACTGGCCT+GGG | 0.392855 | 8.1:+26825084 | MS.gene011805:CDS |
| TGCTGCCAACTCACTTTGAT+TGG | 0.397271 | 8.1:-26820583 | None:intergenic |
| TTCCTAACCTTGTATGGAGT+TGG | 0.400922 | 8.1:-26825634 | None:intergenic |
| AATGCAACTGCACAGAAGTT+GGG | 0.411249 | 8.1:-26821277 | None:intergenic |
| TCCTAACCTTGTATGGAGTT+GGG | 0.415366 | 8.1:-26825633 | None:intergenic |
| TACTGAATATAAGTACTTCT+GGG | 0.416239 | 8.1:+26826092 | MS.gene011805:intron |
| CTCCAAGCCTCTCCTTCAAC+TGG | 0.416714 | 8.1:-26827550 | None:intergenic |
| ATTAGATGCTTTAAACAAAC+AGG | 0.416742 | 8.1:+26822215 | MS.gene011805:CDS |
| CATTTCACATATTCATCTGT+TGG | 0.417700 | 8.1:-26827403 | None:intergenic |
| CTTCTAAGGTGTTACTGGCC+TGG | 0.431776 | 8.1:+26825083 | MS.gene011805:CDS |
| CTCCAGTCATTATGTCTACC+AGG | 0.433960 | 8.1:-26824417 | None:intergenic |
| CTATAGGATCGCTTCTTACA+TGG | 0.436213 | 8.1:-26824370 | None:intergenic |
| CGCTCTCTTGGATTCTTGAA+AGG | 0.437008 | 8.1:-26825033 | None:intergenic |
| GGCTCGCGATCCACAACTTC+CGG | 0.438118 | 8.1:+26827300 | MS.gene011805:CDS |
| GGCTCAATGAGGCACCAGTT+GGG | 0.439145 | 8.1:+26825770 | MS.gene011805:CDS |
| CTGGATTGGAAGAATGCATA+AGG | 0.441740 | 8.1:+26816200 | MS.gene011805:CDS |
| TAATGCAACTGCACAGAAGT+TGG | 0.442512 | 8.1:-26821278 | None:intergenic |
| GAGTGGAACATTGGGAAGAA+AGG | 0.444828 | 8.1:+26827229 | MS.gene011805:CDS |
| AATGGAGCGAAAGAACTTCC+TGG | 0.448587 | 8.1:-26822121 | None:intergenic |
| CTGGCAGCCATTACAAGGAT+TGG | 0.452728 | 8.1:+26827503 | MS.gene011805:CDS |
| TATTACTGCAGCTCCCCAAC+TGG | 0.454332 | 8.1:-26825784 | None:intergenic |
| TGTTATGCTCAAGCTGCCTT+AGG | 0.454896 | 8.1:+26824185 | MS.gene011805:CDS |
| GAGAACGAATTCGGGGTGCC+TGG | 0.455476 | 8.1:+26822144 | MS.gene011805:CDS |
| TGTGCAGTTGCATTAGCTCT+TGG | 0.457201 | 8.1:+26821286 | MS.gene011805:CDS |
| TTCTTTCCCATACAACCTAT+AGG | 0.459452 | 8.1:-26824386 | None:intergenic |
| ATGACTTCATTCATTTCTTG+TGG | 0.460255 | 8.1:+26825749 | MS.gene011805:CDS |
| CGGAAAGTACTCACAGCAAC+CGG | 0.460592 | 8.1:-26817503 | None:intergenic |
| AGCGTGTTGAGGAGCTTCTA+AGG | 0.462574 | 8.1:+26825069 | MS.gene011805:CDS |
| AGTGGAACATTGGGAAGAAA+GGG | 0.467255 | 8.1:+26827230 | MS.gene011805:CDS |
| CTGTTATAGAGTGGAACATT+GGG | 0.467583 | 8.1:+26827221 | MS.gene011805:CDS |
| TTAAGTTTCCTCATGTGGTC+AGG | 0.470368 | 8.1:-26825610 | None:intergenic |
| GCCAATAGCAATGTTGCAGC+GGG | 0.473863 | 8.1:+26818647 | MS.gene011805:intron |
| TAACAGAAAAGTAATGCAAC+TGG | 0.475635 | 8.1:-26827204 | None:intergenic |
| GGTCATGAGGTTGATGCCTT+CGG | 0.478095 | 8.1:+26824140 | MS.gene011805:CDS |
| GACGCTGAAACTCCACCATC+AGG | 0.478879 | 8.1:-26817831 | None:intergenic |
| GCTCTCTTGGATTCTTGAAA+GGG | 0.479048 | 8.1:-26825032 | None:intergenic |
| TGGTACCACATACGCTCTCT+TGG | 0.481281 | 8.1:-26825045 | None:intergenic |
| CTCCACTCAGCCGGAAGTTG+TGG | 0.481314 | 8.1:-26827310 | None:intergenic |
| ATTTCCTTCAGAGGTGGTAA+AGG | 0.481557 | 8.1:-26825550 | None:intergenic |
| CTTGAAAGGGATGGCGGCAT+AGG | 0.481896 | 8.1:-26825019 | None:intergenic |
| GTTTGGACTACGAAGGGCTC+AGG | 0.485888 | 8.1:+26817719 | MS.gene011805:CDS |
| TCAAAGTATTGTTATATTGG+TGG | 0.491295 | 8.1:+26817852 | MS.gene011805:CDS |
| TGATGTGGATGTGTTGGTAT+CGG | 0.496229 | 8.1:+26827450 | MS.gene011805:CDS |
| CACAATTTAGTTTACCTCAC+AGG | 0.503069 | 8.1:-26816287 | None:intergenic |
| ATATAAGTACTTCTGGGCTC+TGG | 0.509396 | 8.1:+26826098 | MS.gene011805:intron |
| GCAAAACAATACCTTTGGAG+GGG | 0.509887 | 8.1:-26824449 | None:intergenic |
| CGCTCTCTAATTTCCTTCAG+AGG | 0.510717 | 8.1:-26825559 | None:intergenic |
| TGGAACTTCAAACCAGTTGA+AGG | 0.511902 | 8.1:+26827538 | MS.gene011805:CDS |
| TTGGGTTAAGTTTCCTCATG+TGG | 0.512144 | 8.1:-26825615 | None:intergenic |
| ACAGTATACTCTCCACCAAA+AGG | 0.514131 | 8.1:-26816172 | None:intergenic |
| AACAAAATCAATCTCATCCT+CGG | 0.515409 | 8.1:-26816245 | None:intergenic |
| AGTCTCATCCAAGAAATTAG+TGG | 0.515814 | 8.1:+26827571 | MS.gene011805:CDS |
| TAGCTCTAGGGGAGGAAACA+AGG | 0.516065 | 8.1:+26827257 | MS.gene011805:CDS |
| AACCAGTTGAAGGAGAGGCT+TGG | 0.516090 | 8.1:+26827548 | MS.gene011805:CDS |
| ACTTGACTGCTCTGATGTTG+AGG | 0.516145 | 8.1:+26817418 | MS.gene011805:CDS |
| ACTTCTCCAGCAAAATTTCG+TGG | 0.516244 | 8.1:-26827479 | None:intergenic |
| GCAGCACCACCAGCAGTGTA+TGG | 0.517901 | 8.1:+26827366 | MS.gene011805:CDS |
| CTTGCTTAGAGTTGAAGGTC+CGG | 0.521415 | 8.1:+26817484 | MS.gene011805:CDS |
| TCTGTTATAGAGTGGAACAT+TGG | 0.521992 | 8.1:+26827220 | MS.gene011805:CDS |
| CATATTTGTCTTGTGAAGCC+AGG | 0.522611 | 8.1:+26822103 | MS.gene011805:CDS |
| AAGTGCTGGCAGCCATTACA+AGG | 0.525627 | 8.1:+26827498 | MS.gene011805:CDS |
| TCCACTGTGCCATACACTGC+TGG | 0.528005 | 8.1:-26827375 | None:intergenic |
| TATAGGTTGTATGGGAAAGA+AGG | 0.531570 | 8.1:+26824388 | MS.gene011805:CDS |
| ATTATCAACTTCCCAAATCC+AGG | 0.531997 | 8.1:-26822162 | None:intergenic |
| AAGAAAGGGAATCTAGCTCT+AGG | 0.532178 | 8.1:+26827244 | MS.gene011805:CDS |
| TTATTTGGAATCCCGCTTCG+TGG | 0.532181 | 8.1:+26818674 | MS.gene011805:CDS |
| TCTTGGATTCTTGAAAGGGA+TGG | 0.537521 | 8.1:-26825028 | None:intergenic |
| ACTTAACCCAACTCCATACA+AGG | 0.538966 | 8.1:+26825627 | MS.gene011805:CDS |
| GGGAATGTGTACCACGAAGC+GGG | 0.539172 | 8.1:-26818685 | None:intergenic |
| ACAAGGGCAAGAAAGTTGTC+AGG | 0.540919 | 8.1:-26820630 | None:intergenic |
| TCATGGACCTACGAATCCTA+TGG | 0.541291 | 8.1:+26815109 | MS.gene011805:CDS |
| ACTTTCTGAAGATGTGTCAA+AGG | 0.543273 | 8.1:+26824253 | MS.gene011805:CDS |
| GCTCAATGAGGCACCAGTTG+GGG | 0.544344 | 8.1:+26825771 | MS.gene011805:CDS |
| TAGTTCTCACCTAAATTCCC+AGG | 0.544774 | 8.1:-26825101 | None:intergenic |
| TATATGAGCTAACGAAAGCA+TGG | 0.545325 | 8.1:-26818706 | None:intergenic |
| CACCCCGAATTCGTTCTCAA+TGG | 0.547774 | 8.1:-26822139 | None:intergenic |
| CTTCGGAATTGGTACATACC+TGG | 0.548704 | 8.1:+26824157 | MS.gene011805:CDS |
| TGGCTCAATGAGGCACCAGT+TGG | 0.548959 | 8.1:+26825769 | MS.gene011805:CDS |
| AGGATTCGTAGGTCCATGAA+TGG | 0.552761 | 8.1:-26815105 | None:intergenic |
| GTGCAAAACAATACCTTTGG+AGG | 0.555579 | 8.1:-26824451 | None:intergenic |
| TTACATCATATGTGTCTACA+AGG | 0.556234 | 8.1:-26820647 | None:intergenic |
| TGATAGAGATCATTGAGAAG+AGG | 0.559266 | 8.1:-26815137 | None:intergenic |
| TTGTTAGTCTGGTTCAAACA+TGG | 0.561798 | 8.1:+26818954 | MS.gene011805:CDS |
| CAAAACAATACCTTTGGAGG+GGG | 0.564146 | 8.1:-26824448 | None:intergenic |
| TGTTGAATGTAGGGGCCTGA+TGG | 0.565013 | 8.1:+26817816 | MS.gene011805:intron |
| TGAGCAGTTCTCCACTCAGC+CGG | 0.565233 | 8.1:-26827319 | None:intergenic |
| AGGTCACTTCGTAGAAAAGA+TGG | 0.565355 | 8.1:+26818911 | MS.gene011805:CDS |
| AAATTAATTAGATTCACAAA+GGG | 0.567105 | 8.1:-26817627 | None:intergenic |
| AGCGATCCTATAGGTTGTAT+GGG | 0.567188 | 8.1:+26824380 | MS.gene011805:CDS |
| TCATTTCTTGTGGCTCAATG+AGG | 0.568289 | 8.1:+26825759 | MS.gene011805:CDS |
| CCCCTGGTAGACATAATGAC+TGG | 0.569438 | 8.1:+26824415 | MS.gene011805:CDS |
| CATGTAAGAAGCGATCCTAT+AGG | 0.570845 | 8.1:+26824371 | MS.gene011805:CDS |
| AGAAAGGGAATCTAGCTCTA+GGG | 0.572067 | 8.1:+26827245 | MS.gene011805:CDS |
| ATGCAACTGCACAGAAGTTG+GGG | 0.573729 | 8.1:-26821276 | None:intergenic |
| TTGAGAAGAGGTGTGACCAT+AGG | 0.574349 | 8.1:-26815125 | None:intergenic |
| ACCTGTCGGTAATCTCATCA+AGG | 0.577063 | 8.1:-26818892 | None:intergenic |
| TGTTGACAGGTAATGAGAAG+TGG | 0.578723 | 8.1:+26821250 | MS.gene011805:intron |
| AGAATCCAAGAGAGCGTATG+TGG | 0.579938 | 8.1:+26825040 | MS.gene011805:CDS |
| CTTGAGCATAACATGTGACC+AGG | 0.580157 | 8.1:-26824175 | None:intergenic |
| ACTTGAGTTTGGACTACGAA+GGG | 0.580939 | 8.1:+26817713 | MS.gene011805:CDS |
| GAGGTGTATGCTATTCCCGA+GGG | 0.584979 | 8.1:+26817437 | MS.gene011805:CDS |
| CGGACCTTCAACTCTAAGCA+AGG | 0.589449 | 8.1:-26817483 | None:intergenic |
| GCTGAGTGGAGAACTGCTCA+TGG | 0.589843 | 8.1:+26827322 | MS.gene011805:CDS |
| TGTGGTACCACAGCGTGTTG+AGG | 0.590591 | 8.1:+26825058 | MS.gene011805:CDS |
| TGCAAAACAATACCTTTGGA+GGG | 0.591025 | 8.1:-26824450 | None:intergenic |
| AGCTCTAGGGGAGGAAACAA+GGG | 0.592410 | 8.1:+26827258 | MS.gene011805:CDS |
| AAAATTAATTAGATTCACAA+AGG | 0.592412 | 8.1:-26817628 | None:intergenic |
| TCCAGTCATTATGTCTACCA+GGG | 0.594991 | 8.1:-26824416 | None:intergenic |
| GCTCATGGTCAAGACTGTCA+TGG | 0.597373 | 8.1:+26827337 | MS.gene011805:CDS |
| CAGCTTGAAAACAACACCTA+AGG | 0.598168 | 8.1:-26824201 | None:intergenic |
| TTGGTGGATTTGACGCAACA+AGG | 0.599362 | 8.1:+26817868 | MS.gene011805:CDS |
| CTTCAAACCAGTTGAAGGAG+AGG | 0.601120 | 8.1:+26827543 | MS.gene011805:CDS |
| ATTTAGTTTACCTCACAGGA+AGG | 0.601841 | 8.1:-26816283 | None:intergenic |
| TCAATCAACTTGAGCAAATG+CGG | 0.604023 | 8.1:+26825587 | MS.gene011805:CDS |
| TGGATTCTTGAAAGGGATGG+CGG | 0.608615 | 8.1:-26825025 | None:intergenic |
| TGAGACCAATCAAAGTGAGT+TGG | 0.610265 | 8.1:+26820578 | MS.gene011805:CDS |
| ATATGAGCTAACGAAAGCAT+GGG | 0.611288 | 8.1:-26818705 | None:intergenic |
| GGAACCTTTACCACCTCTGA+AGG | 0.611317 | 8.1:+26825546 | MS.gene011805:CDS |
| TGCCAATAGCAATGTTGCAG+CGG | 0.611696 | 8.1:+26818646 | MS.gene011805:intron |
| TGGGAAAGAAGGTTATCCCC+TGG | 0.612749 | 8.1:+26824399 | MS.gene011805:CDS |
| AAATGCGGCCTGACCACATG+AGG | 0.614621 | 8.1:+26825602 | MS.gene011805:CDS |
| ATCCACAACTTCCGGCTGAG+TGG | 0.618803 | 8.1:+26827308 | MS.gene011805:CDS |
| TCTCTAATTTCCTTCAGAGG+TGG | 0.621605 | 8.1:-26825556 | None:intergenic |
| GGACACAACTAATCGTGTGT+TGG | 0.622226 | 8.1:+26827279 | MS.gene011805:CDS |
| GAAAGGGAATCTAGCTCTAG+GGG | 0.624170 | 8.1:+26827246 | MS.gene011805:CDS |
| ACTGTGCCATACACTGCTGG+TGG | 0.628280 | 8.1:-26827372 | None:intergenic |
| AACAACGAACGAACTTCGAA+CGG | 0.630256 | 8.1:+26815080 | MS.gene011805:CDS |
| GCCTTGATGAGATTACCGAC+AGG | 0.631046 | 8.1:+26818891 | MS.gene011805:CDS |
| TGAATGTAGGGGCCTGATGG+TGG | 0.633461 | 8.1:+26817819 | MS.gene011805:intron |
| GGTGTGACCATAGGATTCGT+AGG | 0.633617 | 8.1:-26815116 | None:intergenic |
| CAGGTATGTACCAATTCCGA+AGG | 0.636369 | 8.1:-26824156 | None:intergenic |
| TACTTGAGTTTGGACTACGA+AGG | 0.637267 | 8.1:+26817712 | MS.gene011805:CDS |
| GTCCTGTGCAGATACAAAGC+AGG | 0.640232 | 8.1:+26822051 | MS.gene011805:intron |
| TGGGAATGTGTACCACGAAG+CGG | 0.642947 | 8.1:-26818686 | None:intergenic |
| TGCTAGTAATGATCTCAATG+AGG | 0.646930 | 8.1:+26822188 | MS.gene011805:CDS |
| CTGTGCAGATACAAAGCAGG+TGG | 0.652922 | 8.1:+26822054 | MS.gene011805:intron |
| TAGTTTCTACAAATGCTGCA+AGG | 0.653701 | 8.1:+26817658 | MS.gene011805:CDS |
| AGAAGCTCCTCAACACGCTG+TGG | 0.657506 | 8.1:-26825065 | None:intergenic |
| CTCCATTGAGAACGAATTCG+GGG | 0.663447 | 8.1:+26822137 | MS.gene011805:CDS |
| GGACCTTCAACTCTAAGCAA+GGG | 0.666225 | 8.1:-26817482 | None:intergenic |
| AAGTTTGTCTCCTTCCTGTG+AGG | 0.666980 | 8.1:+26816273 | MS.gene011805:CDS |
| TACATCATATGTGTCTACAA+GGG | 0.668527 | 8.1:-26820646 | None:intergenic |
| CCAGTCATTATGTCTACCAG+GGG | 0.671044 | 8.1:-26824415 | None:intergenic |
| TGAGGTGTATGCTATTCCCG+AGG | 0.673024 | 8.1:+26817436 | MS.gene011805:CDS |
| CTTCACAAGACAAATATGCA+AGG | 0.678666 | 8.1:-26822098 | None:intergenic |
| TTTCCAATAAGCATAAGCCA+TGG | 0.679199 | 8.1:-26815165 | None:intergenic |
| TGATCTCTATCAATTCACCA+TGG | 0.711578 | 8.1:+26815148 | MS.gene011805:CDS |
| AGCTAATTTCAAACTCACCG+AGG | 0.712194 | 8.1:+26816228 | MS.gene011805:CDS |
| AGGGAATCTAGCTCTAGGGG+AGG | 0.712252 | 8.1:+26827249 | MS.gene011805:CDS |
| ACCAGCAGTGTATGGCACAG+TGG | 0.717716 | 8.1:+26827374 | MS.gene011805:CDS |
| TCTTCAGAAAGTTTGATACG+AGG | 0.717872 | 8.1:-26824242 | None:intergenic |
| CCAATAGCAATGTTGCAGCG+GGG | 0.738942 | 8.1:+26818648 | MS.gene011805:intron |
| AGGTGTATGCTATTCCCGAG+GGG | 0.750557 | 8.1:+26817438 | MS.gene011805:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 26815056 | 26827597 | 26815056 | ID=MS.gene011805 |
| chr8.1 | mRNA | 26815056 | 26827597 | 26815056 | ID=MS.gene011805.t1;Parent=MS.gene011805 |
| chr8.1 | exon | 26815056 | 26815213 | 26815056 | ID=MS.gene011805.t1.exon1;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26815056 | 26815213 | 26815056 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26816147 | 26816294 | 26816147 | ID=MS.gene011805.t1.exon2;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26816147 | 26816294 | 26816147 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26817392 | 26817511 | 26817392 | ID=MS.gene011805.t1.exon3;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26817392 | 26817511 | 26817392 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26817606 | 26817740 | 26817606 | ID=MS.gene011805.t1.exon4;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26817606 | 26817740 | 26817606 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26817828 | 26817889 | 26817828 | ID=MS.gene011805.t1.exon5;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26817828 | 26817889 | 26817828 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26818655 | 26818730 | 26818655 | ID=MS.gene011805.t1.exon6;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26818655 | 26818730 | 26818655 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26818890 | 26818991 | 26818890 | ID=MS.gene011805.t1.exon7;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26818890 | 26818991 | 26818890 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26820558 | 26820665 | 26820558 | ID=MS.gene011805.t1.exon8;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26820558 | 26820665 | 26820558 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26821259 | 26821317 | 26821259 | ID=MS.gene011805.t1.exon9;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26821259 | 26821317 | 26821259 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26822062 | 26822236 | 26822062 | ID=MS.gene011805.t1.exon10;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26822062 | 26822236 | 26822062 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26824140 | 26824274 | 26824140 | ID=MS.gene011805.t1.exon11;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26824140 | 26824274 | 26824140 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26824361 | 26824459 | 26824361 | ID=MS.gene011805.t1.exon12;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26824361 | 26824459 | 26824361 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26825005 | 26825113 | 26825005 | ID=MS.gene011805.t1.exon13;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26825005 | 26825113 | 26825005 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26825536 | 26825648 | 26825536 | ID=MS.gene011805.t1.exon14;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26825536 | 26825648 | 26825536 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26825727 | 26825800 | 26825727 | ID=MS.gene011805.t1.exon15;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26825727 | 26825800 | 26825727 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26826105 | 26826135 | 26826105 | ID=MS.gene011805.t1.exon16;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26826105 | 26826135 | 26826105 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| chr8.1 | exon | 26827187 | 26827597 | 26827187 | ID=MS.gene011805.t1.exon17;Parent=MS.gene011805.t1 |
| chr8.1 | CDS | 26827187 | 26827597 | 26827187 | ID=cds.MS.gene011805.t1;Parent=MS.gene011805.t1 |
| Gene Sequence |
| Protein sequence |
