Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36335.t1 | XP_003597713.1 | 97.6 | 462 | 6 | 2 | 2 | 460 | 6 | 465 | 1.20E-262 | 915.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36335.t1 | G7IUP0 | 97.6 | 462 | 6 | 2 | 2 | 460 | 6 | 465 | 8.6e-263 | 915.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049411 | MS.gene36335 | 0.835055 | 2.10E-56 | -1.69E-46 |
MS.gene050838 | MS.gene36335 | 0.811351 | 7.31E-51 | -1.69E-46 |
MS.gene051234 | MS.gene36335 | 0.82271 | 2.05E-53 | -1.69E-46 |
MS.gene051642 | MS.gene36335 | 0.804246 | 2.37E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36335.t1 | MTR_2g101480 | 97.619 | 462 | 6 | 2 | 2 | 460 | 6 | 465 | 0.0 | 938 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36335.t1 | AT3G16200 | 75.885 | 452 | 91 | 7 | 15 | 459 | 13 | 453 | 0.0 | 694 |
Find 116 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGACAATTCTGTATTTAA+TGG | 0.107700 | 2.2:-2116915 | MS.gene36335:CDS |
GATGGACTTGATTCGGATTT+TGG | 0.155423 | 2.2:-2121243 | MS.gene36335:CDS |
GGAAAGGACTTTGTGGATTT+TGG | 0.180019 | 2.2:-2119602 | MS.gene36335:CDS |
ATTGGCCGTGTTTCGTAAAT+AGG | 0.209455 | 2.2:+2119857 | None:intergenic |
GGTCAAGAAGGAAGAAATTC+TGG | 0.238849 | 2.2:-2117223 | MS.gene36335:CDS |
ATTCAACATACCGGCTATTC+TGG | 0.240870 | 2.2:+2117081 | None:intergenic |
TGGGAACTCCCACCAGTTGC+TGG | 0.256831 | 2.2:-2117041 | MS.gene36335:CDS |
GAAGCATGGTGGGGAGTTAG+AGG | 0.264109 | 2.2:-2117161 | MS.gene36335:CDS |
GGCGGTGGTGGTGGTTTGCT+TGG | 0.273239 | 2.2:+2121551 | None:intergenic |
GATGAAGGAACATGGGATTA+AGG | 0.331133 | 2.2:-2119558 | MS.gene36335:CDS |
TGGAATCGTCGGCGTTGATT+AGG | 0.335459 | 2.2:+2121475 | None:intergenic |
CAATTTGTACGGGATGGGTT+TGG | 0.371624 | 2.2:-2119828 | MS.gene36335:CDS |
AAATGTTGTGCGTAAGATAT+TGG | 0.372552 | 2.2:+2117104 | None:intergenic |
AGGTTTGAAGAAAGCGTTAG+AGG | 0.376499 | 2.2:+2121293 | None:intergenic |
AATCTATTCTTGATGTGTAC+TGG | 0.378297 | 2.2:-2117061 | MS.gene36335:CDS |
TGGTTTGGATGGACTTGATT+CGG | 0.385540 | 2.2:-2121250 | MS.gene36335:CDS |
ATGGGTTTGGACCACAGCTT+TGG | 0.386433 | 2.2:-2119815 | MS.gene36335:CDS |
GCGGTGGTGGTGGTTTGCTT+GGG | 0.391412 | 2.2:+2121552 | None:intergenic |
CTTTCAAAGGACATTCAACT+TGG | 0.391555 | 2.2:-2119739 | MS.gene36335:CDS |
CCGCTCTAACATGGCGGTGG+TGG | 0.392725 | 2.2:+2121539 | None:intergenic |
TTGGACTTTGGTTCATTGCT+CGG | 0.397327 | 2.2:-2119796 | MS.gene36335:CDS |
TGGACCACAGCTTTGGACTT+TGG | 0.407799 | 2.2:-2119808 | MS.gene36335:CDS |
TTGTTCCAACGGCTTGGCTT+GGG | 0.409816 | 2.2:-2116942 | MS.gene36335:CDS |
AGAGAAACAATCCGTGTGTC+TGG | 0.410853 | 2.2:+2119698 | None:intergenic |
ATCGAACAAGCTCTGAAAGC+TGG | 0.412671 | 2.2:-2119376 | MS.gene36335:CDS |
CCCAATCCTATTGTTGAAGA+TGG | 0.416059 | 2.2:-2116975 | MS.gene36335:CDS |
CTCTAACATGGCGGTGGTGG+TGG | 0.418848 | 2.2:+2121542 | None:intergenic |
CATTGCTCGGTGGCTTAAAC+CGG | 0.420779 | 2.2:-2119783 | MS.gene36335:CDS |
ATTGTTGAAGATGGGCGATA+TGG | 0.421102 | 2.2:-2116966 | MS.gene36335:CDS |
TATCGCCCATCTTCAACAAT+AGG | 0.424527 | 2.2:+2116969 | None:intergenic |
TTTGTTCCAACGGCTTGGCT+TGG | 0.427867 | 2.2:-2116943 | MS.gene36335:CDS |
CCCATCTTCAACAATAGGAT+TGG | 0.442426 | 2.2:+2116974 | None:intergenic |
TTTGAGGATAACTATGACAC+TGG | 0.446853 | 2.2:-2119337 | MS.gene36335:CDS |
GGCGATATGGTTTGTTCCAA+CGG | 0.449699 | 2.2:-2116953 | MS.gene36335:CDS |
AAGGGACCTGCATATGTTGA+TGG | 0.450797 | 2.2:-2119644 | MS.gene36335:CDS |
AGCACGAGCAGGATCATATC+TGG | 0.451103 | 2.2:+2116998 | None:intergenic |
TTATGCTGGAAAGGACTTTG+TGG | 0.455968 | 2.2:-2119609 | MS.gene36335:CDS |
ACATCGAAAGATCTGCTTAA+GGG | 0.459473 | 2.2:-2119896 | MS.gene36335:CDS |
GTGAGGGAAGGCCCAGCAAC+TGG | 0.459978 | 2.2:+2117029 | None:intergenic |
TATGGTTTGTTCCAACGGCT+TGG | 0.461150 | 2.2:-2116948 | MS.gene36335:CDS |
GACATCGAAAGATCTGCTTA+AGG | 0.463805 | 2.2:-2119897 | MS.gene36335:CDS |
GGGAACTCCCACCAGTTGCT+GGG | 0.465738 | 2.2:-2117040 | MS.gene36335:CDS |
ATCGAAGAACTGTGTGGACC+GGG | 0.467070 | 2.2:-2117185 | MS.gene36335:CDS |
GTGAATGTGATAGATAGTTT+TGG | 0.469781 | 2.2:+2121597 | None:intergenic |
ACCATCAAAATGAATTGAAA+AGG | 0.476313 | 2.2:-2119505 | MS.gene36335:intron |
GAAAGATCTGCTTAAGGGGC+TGG | 0.477312 | 2.2:-2119891 | MS.gene36335:CDS |
GCCGTGTGAGTTGCCGCGGC+GGG | 0.479440 | 2.2:+2121506 | None:intergenic |
CCATCTTCAACAATAGGATT+GGG | 0.481274 | 2.2:+2116975 | None:intergenic |
AGAGTGTGTATGCCGTGTTC+CGG | 0.484405 | 2.2:+2121575 | None:intergenic |
AAAATATAAGAACCCGACTA+AGG | 0.505050 | 2.2:+2119534 | None:intergenic |
AGTTGCCGCGGCGGGAGGAG+AGG | 0.516643 | 2.2:+2121514 | None:intergenic |
AACATGGTAAAACTGTAGAA+TGG | 0.516964 | 2.2:-2119919 | MS.gene36335:CDS |
ATGGGATTAAGGACCTTAGT+CGG | 0.517214 | 2.2:-2119547 | MS.gene36335:CDS |
TCGAACAAGCTCTGAAAGCT+GGG | 0.517584 | 2.2:-2119375 | MS.gene36335:CDS |
GTTGCCGCGGCGGGAGGAGA+GGG | 0.518539 | 2.2:+2121515 | None:intergenic |
GTCAAGAAGGAAGAAATTCT+GGG | 0.519369 | 2.2:-2117222 | MS.gene36335:CDS |
ATCGAGAGTGGCGCTTTCAA+AGG | 0.522095 | 2.2:-2119752 | MS.gene36335:CDS |
ATAGGATTGGGAGCACGAGC+AGG | 0.525259 | 2.2:+2116987 | None:intergenic |
CATCGAAAGATCTGCTTAAG+GGG | 0.526864 | 2.2:-2119895 | MS.gene36335:CDS |
TGGGATTAAGGACCTTAGTC+GGG | 0.527204 | 2.2:-2119546 | MS.gene36335:CDS |
ATGGCGAGTTTGAGAAAGAA+AGG | 0.527580 | 2.2:+2121404 | None:intergenic |
GGAGAGGGTCCGCTCTAACA+TGG | 0.531732 | 2.2:+2121530 | None:intergenic |
ACAGTGATGAAGCTAGGATC+AGG | 0.535106 | 2.2:-2117244 | MS.gene36335:CDS |
CTGTACATATTATGCTGGAA+AGG | 0.537392 | 2.2:-2119618 | MS.gene36335:CDS |
ACTCCCCACCATGCTTCCCC+CGG | 0.538603 | 2.2:+2117167 | None:intergenic |
GTGTGAGTTGCCGCGGCGGG+AGG | 0.541072 | 2.2:+2121509 | None:intergenic |
AAGAAAGGTTGAAGCTCTGT+TGG | 0.544106 | 2.2:+2121419 | None:intergenic |
ATCTATTCTTGATGTGTACT+GGG | 0.544485 | 2.2:-2117060 | MS.gene36335:CDS |
CACAACATTTCCAGAATAGC+CGG | 0.546708 | 2.2:-2117091 | MS.gene36335:CDS |
AAACTATCTATCACATTCAC+CGG | 0.547164 | 2.2:-2121594 | MS.gene36335:CDS |
TATCGAAGAACTGTGTGGAC+CGG | 0.547616 | 2.2:-2117186 | MS.gene36335:CDS |
GGTAACTGTACATATTATGC+TGG | 0.547866 | 2.2:-2119623 | MS.gene36335:CDS |
TTAAAGACAGTGATGAAGCT+AGG | 0.550409 | 2.2:-2117250 | MS.gene36335:CDS |
CCAATCCTATTGTTGAAGAT+GGG | 0.550828 | 2.2:-2116974 | MS.gene36335:CDS |
AAGCTAGGATCAGGTCAAGA+AGG | 0.552627 | 2.2:-2117235 | MS.gene36335:CDS |
ATATCTGCCTCAATGAATAG+TGG | 0.555941 | 2.2:+2119305 | None:intergenic |
GATAACTATGACACTGGTAC+TGG | 0.556884 | 2.2:-2119331 | MS.gene36335:CDS |
CGGTGAGACACGGAACGTAA+TGG | 0.560147 | 2.2:+2121385 | None:intergenic |
CGCCGTGTGAGTTGCCGCGG+CGG | 0.564349 | 2.2:+2121505 | None:intergenic |
TCAAAAGTGATGAAGGAACA+TGG | 0.564530 | 2.2:-2119566 | MS.gene36335:CDS |
CCACTCTCGATCATCAGATC+CGG | 0.564703 | 2.2:+2119764 | None:intergenic |
AAGCTCTGAAAGCTGGGTTC+CGG | 0.567889 | 2.2:-2119369 | MS.gene36335:CDS |
GGTCCGCTCTAACATGGCGG+TGG | 0.567904 | 2.2:+2121536 | None:intergenic |
AGGGAAGGCCCAGCAACTGG+TGG | 0.571202 | 2.2:+2117032 | None:intergenic |
TCCCGCCGCGGCAACTCACA+CGG | 0.573930 | 2.2:-2121507 | MS.gene36335:CDS |
AGAAATGCGACGGTGAGACA+CGG | 0.576631 | 2.2:+2121375 | None:intergenic |
CAGTTACCATCAACATATGC+AGG | 0.580311 | 2.2:+2119638 | None:intergenic |
GTTTACCCAAGCCAAGCCGT+TGG | 0.582083 | 2.2:+2116937 | None:intergenic |
CATATCTGGTTTGATGAGTG+AGG | 0.582958 | 2.2:+2117012 | None:intergenic |
GACTTTGGTTCATTGCTCGG+TGG | 0.585989 | 2.2:-2119793 | MS.gene36335:CDS |
ATTTAATGGATACACTCAGA+TGG | 0.590958 | 2.2:-2116901 | MS.gene36335:CDS |
CAAGAATAGATTCAACATAC+CGG | 0.595311 | 2.2:+2117072 | None:intergenic |
TTGTTCCTATTTACGAAACA+CGG | 0.600459 | 2.2:-2119862 | MS.gene36335:CDS |
TTTCAAAGGACATTCAACTT+GGG | 0.605039 | 2.2:-2119738 | MS.gene36335:CDS |
TGATTGGTCAAAAGTGATGA+AGG | 0.606371 | 2.2:-2119573 | MS.gene36335:CDS |
CGAAGAACTGTGTGGACCGG+GGG | 0.610571 | 2.2:-2117183 | MS.gene36335:CDS |
ATATCTGGTTTGATGAGTGA+GGG | 0.615387 | 2.2:+2117013 | None:intergenic |
CAAAAGTGATGAAGGAACAT+GGG | 0.618251 | 2.2:-2119565 | MS.gene36335:CDS |
CTATCACATTCACCGGAACA+CGG | 0.620764 | 2.2:-2121587 | MS.gene36335:CDS |
ATCGTCGGCGTTGATTAGGT+CGG | 0.625348 | 2.2:+2121479 | None:intergenic |
CCACCACCGCCATGTTAGAG+CGG | 0.625424 | 2.2:-2121539 | MS.gene36335:CDS |
AGTCGCCGTGTGAGTTGCCG+CGG | 0.625812 | 2.2:+2121502 | None:intergenic |
GGGAAGGCCCAGCAACTGGT+GGG | 0.631549 | 2.2:+2117033 | None:intergenic |
CTGGTTTGATGAGTGAGGGA+AGG | 0.637482 | 2.2:+2117017 | None:intergenic |
TCGAAGAACTGTGTGGACCG+GGG | 0.638921 | 2.2:-2117184 | MS.gene36335:CDS |
CCGGATCTGATGATCGAGAG+TGG | 0.640213 | 2.2:-2119764 | MS.gene36335:CDS |
GGTAAAGGCAGATCGAAACA+TGG | 0.645538 | 2.2:-2119935 | MS.gene36335:intron |
GGATTGTTTCTCTTTCACCT+AGG | 0.649691 | 2.2:-2119688 | MS.gene36335:CDS |
AAGCATGGTGGGGAGTTAGA+GGG | 0.651325 | 2.2:-2117160 | MS.gene36335:CDS |
TGAACCAAAGTCCAAAGCTG+TGG | 0.657862 | 2.2:+2119804 | None:intergenic |
GGCAAGCTATGCCAGACACA+CGG | 0.658316 | 2.2:-2119709 | MS.gene36335:CDS |
GAAGAGAAGAAGAAATGCGA+CGG | 0.683216 | 2.2:+2121365 | None:intergenic |
CGGACCCTCTCCTCCCGCCG+CGG | 0.692577 | 2.2:-2121519 | MS.gene36335:CDS |
GTTGATATCGAAGAACTGTG+TGG | 0.717547 | 2.2:-2117191 | MS.gene36335:CDS |
CTGGTGACCACTATTCATTG+AGG | 0.723424 | 2.2:-2119312 | MS.gene36335:CDS |
GAGGGTCCGCTCTAACATGG+CGG | 0.747013 | 2.2:+2121533 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAATGGTTATAAAATTA+GGG | - | chr2.2:2120017-2120036 | MS.gene36335:intron | 10.0% |
!!! | AATTCATTGTTTTTTTATTT+GGG | + | chr2.2:2117816-2117835 | None:intergenic | 10.0% |
!!! | ATTATATTAGTATTTTAACT+AGG | - | chr2.2:2120337-2120356 | MS.gene36335:intron | 10.0% |
!!! | TAATTCATTGTTTTTTTATT+TGG | + | chr2.2:2117817-2117836 | None:intergenic | 10.0% |
!!! | TAATTTTATAACCATTTTAA+GGG | + | chr2.2:2120017-2120036 | None:intergenic | 10.0% |
!! | AAATAAAATTTGATTCCATT+CGG | + | chr2.2:2117529-2117548 | None:intergenic | 15.0% |
!! | AAGTTAAATAAATACTAGTT+TGG | + | chr2.2:2118113-2118132 | None:intergenic | 15.0% |
!! | AATACTTATAAGTTTATTCT+TGG | - | chr2.2:2118525-2118544 | MS.gene36335:intron | 15.0% |
!! | CTTAAAATGGTTATAAAATT+AGG | - | chr2.2:2120016-2120035 | MS.gene36335:intron | 15.0% |
!!! | AAAAGTAAATTTTGGTTAAT+AGG | - | chr2.2:2119449-2119468 | MS.gene36335:intron | 15.0% |
!!! | AAATATTTTTCTAATAGCTT+TGG | - | chr2.2:2121148-2121167 | MS.gene36335:intron | 15.0% |
!!! | ACTAGTATTTATTTAACTTT+TGG | - | chr2.2:2118114-2118133 | MS.gene36335:intron | 15.0% |
!!! | ATTTATTTCTTGACATTTTT+TGG | + | chr2.2:2119750-2119769 | None:intergenic | 15.0% |
!!! | CTAATTTTATAACCATTTTA+AGG | + | chr2.2:2120018-2120037 | None:intergenic | 15.0% |
!!! | CTAGTATTTATTTAACTTTT+GGG | - | chr2.2:2118115-2118134 | MS.gene36335:intron | 15.0% |
!! | AAACTCAAAACTCAATTTAT+TGG | - | chr2.2:2120819-2120838 | MS.gene36335:intron | 20.0% |
!! | AATAAAATTTGATTCCATTC+GGG | + | chr2.2:2117528-2117547 | None:intergenic | 20.0% |
!! | ACACTAAATTGAGTATTTAA+AGG | + | chr2.2:2117483-2117502 | None:intergenic | 20.0% |
!! | AGTCTATATAGTAAATTGAA+AGG | - | chr2.2:2119404-2119423 | MS.gene36335:intron | 20.0% |
!! | GAAAGAAAATTCAATAAAGT+AGG | + | chr2.2:2119255-2119274 | None:intergenic | 20.0% |
!! | TATAAGTTTATTCTTGGTAA+AGG | - | chr2.2:2118531-2118550 | MS.gene36335:intron | 20.0% |
!! | TATACTCTTTATCTTTACTT+GGG | + | chr2.2:2120751-2120770 | None:intergenic | 20.0% |
!! | TTATACTCTTTATCTTTACT+TGG | + | chr2.2:2120752-2120771 | None:intergenic | 20.0% |
!! | TTTAGTAACACAAACAAAAT+TGG | - | chr2.2:2117659-2117678 | MS.gene36335:intron | 20.0% |
!!! | AAATGCAAAAATTTTAGCTT+AGG | - | chr2.2:2117374-2117393 | MS.gene36335:intron | 20.0% |
!!! | AATTGATTGATTTTGAATTC+TGG | - | chr2.2:2117557-2117576 | MS.gene36335:intron | 20.0% |
!!! | ATTGATTGATTTTGAATTCT+GGG | - | chr2.2:2117558-2117577 | MS.gene36335:intron | 20.0% |
!!! | ATTTAGTGTTATTGATTTTC+AGG | - | chr2.2:2117494-2117513 | MS.gene36335:intron | 20.0% |
!!! | TTTTTAGAATCGTGATTTTT+AGG | - | chr2.2:2117328-2117347 | MS.gene36335:intron | 20.0% |
! | AAGATCTATATTGAGAGTAA+AGG | + | chr2.2:2120503-2120522 | None:intergenic | 25.0% |
! | AATGCGAATTTAACATGAAT+CGG | + | chr2.2:2117309-2117328 | None:intergenic | 25.0% |
! | AATTGCAAGACTCTAATAAA+TGG | + | chr2.2:2119481-2119500 | None:intergenic | 25.0% |
! | ACCATCAAAATGAATTGAAA+AGG | - | chr2.2:2118976-2118995 | MS.gene36335:intron | 25.0% |
! | AGTCTTGCAATTTATATGAT+TGG | - | chr2.2:2119489-2119508 | MS.gene36335:intron | 25.0% |
! | ATAAAGATTATCAACAGGTA+TGG | + | chr2.2:2121103-2121122 | None:intergenic | 25.0% |
! | ATTTAGCAACTATTCAAAGA+GGG | - | chr2.2:2118035-2118054 | MS.gene36335:intron | 25.0% |
! | CAATCAAAAACAATTTGTAC+GGG | - | chr2.2:2118643-2118662 | MS.gene36335:intron | 25.0% |
! | CCAATATAAAGATTATCAAC+AGG | + | chr2.2:2121108-2121127 | None:intergenic | 25.0% |
! | CCAATCAAAAACAATTTGTA+CGG | - | chr2.2:2118642-2118661 | MS.gene36335:intron | 25.0% |
! | CTTGACAATTCTGTATTTAA+TGG | - | chr2.2:2121566-2121585 | MS.gene36335:CDS | 25.0% |
! | TAAAGTGCATAAGAAAAGTA+AGG | - | chr2.2:2120844-2120863 | MS.gene36335:intron | 25.0% |
! | TATAAAATTAGGGTCAACTT+GGG | - | chr2.2:2120027-2120046 | MS.gene36335:intron | 25.0% |
! | TCTTCATCTTCATCATATAT+TGG | - | chr2.2:2120473-2120492 | MS.gene36335:intron | 25.0% |
! | TTATAAAATTAGGGTCAACT+TGG | - | chr2.2:2120026-2120045 | MS.gene36335:intron | 25.0% |
! | TTATTTGTATGCATTTCTCA+CGG | + | chr2.2:2119283-2119302 | None:intergenic | 25.0% |
! | TTGGTTGAAAAGTAAATGAA+GGG | - | chr2.2:2120640-2120659 | MS.gene36335:intron | 25.0% |
! | TTGTTGGAAAATGTTTGTAT+GGG | - | chr2.2:2121075-2121094 | MS.gene36335:intron | 25.0% |
! | TTTGAAAGAAAAAAGAACAG+AGG | - | chr2.2:2119789-2119808 | MS.gene36335:CDS | 25.0% |
! | TTTGGTTGAAAAGTAAATGA+AGG | - | chr2.2:2120639-2120658 | MS.gene36335:intron | 25.0% |
! | TTTGTTGGAAAATGTTTGTA+TGG | - | chr2.2:2121074-2121093 | MS.gene36335:intron | 25.0% |
!! | ACCTTTTCAATTCATTTTGA+TGG | + | chr2.2:2118980-2118999 | None:intergenic | 25.0% |
!! | AGTGTTTTTCATCAATTTTC+TGG | + | chr2.2:2119356-2119375 | None:intergenic | 25.0% |
!! | ATGACTGCAAAAGTAAATTT+TGG | - | chr2.2:2119441-2119460 | MS.gene36335:intron | 25.0% |
!! | GATTTGAATGTAATGTTTTG+GGG | + | chr2.2:2119721-2119740 | None:intergenic | 25.0% |
!! | GCATTATTACTATTTTGTAG+TGG | + | chr2.2:2120971-2120990 | None:intergenic | 25.0% |
!! | GGATTTGAATGTAATGTTTT+GGG | + | chr2.2:2119722-2119741 | None:intergenic | 25.0% |
!! | TACAAACATTTTCCAACAAA+TGG | + | chr2.2:2121074-2121093 | None:intergenic | 25.0% |
!! | TCAATCACATTCCTTTAAAA+TGG | - | chr2.2:2118209-2118228 | MS.gene36335:intron | 25.0% |
!! | TGGATTTGAATGTAATGTTT+TGG | + | chr2.2:2119723-2119742 | None:intergenic | 25.0% |
!! | TTTGTTCTTTTGTTGATCTA+AGG | - | chr2.2:2121191-2121210 | MS.gene36335:intron | 25.0% |
!!! | AAAAATTTTAGCTTAGGAGT+TGG | - | chr2.2:2117380-2117399 | MS.gene36335:intron | 25.0% |
!!! | AAAGAGAATGTGTTGTTTTT+TGG | + | chr2.2:2117035-2117054 | None:intergenic | 25.0% |
!!! | AAATATGCTTTTTCTTTTCC+CGG | + | chr2.2:2120711-2120730 | None:intergenic | 25.0% |
!!! | AACCATTTTAAGGGTATTTT+GGG | + | chr2.2:2120008-2120027 | None:intergenic | 25.0% |
!!! | AATGTGTTGTTTTTTGGTTT+TGG | + | chr2.2:2117029-2117048 | None:intergenic | 25.0% |
!!! | AGAATTCTTAATTGTCGTTT+TGG | - | chr2.2:2121009-2121028 | MS.gene36335:intron | 25.0% |
!!! | ATTTTTGCATTTTTTCTCTC+TGG | + | chr2.2:2117366-2117385 | None:intergenic | 25.0% |
!!! | CCAGAAAAGTATCTAAAAAA+GGG | - | chr2.2:2118819-2118838 | MS.gene36335:intron | 25.0% |
!!! | CCTGTTGATAATCTTTATAT+TGG | - | chr2.2:2121105-2121124 | MS.gene36335:intron | 25.0% |
!!! | CTAAATGTAACTTGTTTTTG+GGG | + | chr2.2:2118021-2118040 | None:intergenic | 25.0% |
!!! | GAACTAGTTTTTTAGTTGTT+TGG | - | chr2.2:2120621-2120640 | MS.gene36335:intron | 25.0% |
!!! | GCTAAATGTAACTTGTTTTT+GGG | + | chr2.2:2118022-2118041 | None:intergenic | 25.0% |
!!! | GTTGATAATCTTTATATTGG+TGG | - | chr2.2:2121108-2121127 | MS.gene36335:intron | 25.0% |
!!! | TAAATGTAACTTGTTTTTGG+GGG | + | chr2.2:2118020-2118039 | None:intergenic | 25.0% |
!!! | TAACCATTTTAAGGGTATTT+TGG | + | chr2.2:2120009-2120028 | None:intergenic | 25.0% |
!!! | TCCAGAAAAGTATCTAAAAA+AGG | - | chr2.2:2118818-2118837 | MS.gene36335:intron | 25.0% |
!!! | TCTTGACATTTTTTGGTATT+TGG | + | chr2.2:2119743-2119762 | None:intergenic | 25.0% |
!!! | TGCTAAATGTAACTTGTTTT+TGG | + | chr2.2:2118023-2118042 | None:intergenic | 25.0% |
!!! | TTTTCTAATAGCTTTGGAAT+AGG | - | chr2.2:2121154-2121173 | MS.gene36335:intron | 25.0% |
AAAAACAATTTGTACGGGAT+GGG | - | chr2.2:2118648-2118667 | MS.gene36335:intron | 30.0% | |
AAAATATAAGAACCCGACTA+AGG | + | chr2.2:2118950-2118969 | None:intergenic | 30.0% | |
AAACTATCTATCACATTCAC+CGG | - | chr2.2:2116887-2116906 | MS.gene36335:CDS | 30.0% | |
AAAGAGTTGGGAAAATGTTA+GGG | - | chr2.2:2119969-2119988 | MS.gene36335:intron | 30.0% | |
AAATGTTGTGCGTAAGATAT+TGG | + | chr2.2:2121380-2121399 | None:intergenic | 30.0% | |
AACATGGTAAAACTGTAGAA+TGG | - | chr2.2:2118562-2118581 | MS.gene36335:intron | 30.0% | |
AAGATGGTGACATGTATATA+TGG | + | chr2.2:2120395-2120414 | None:intergenic | 30.0% | |
AAGGTAAACAGTAAAGAAGA+TGG | + | chr2.2:2120411-2120430 | None:intergenic | 30.0% | |
AATCTATTCTTGATGTGTAC+TGG | - | chr2.2:2121420-2121439 | MS.gene36335:CDS | 30.0% | |
ACTATTCAAAGAGGGAAATT+TGG | - | chr2.2:2118043-2118062 | MS.gene36335:intron | 30.0% | |
AGATGGTGACATGTATATAT+GGG | + | chr2.2:2120394-2120413 | None:intergenic | 30.0% | |
ATCTATTCTTGATGTGTACT+GGG | - | chr2.2:2121421-2121440 | MS.gene36335:CDS | 30.0% | |
ATGAATTAGTTGAAGTCGTA+AGG | - | chr2.2:2117829-2117848 | MS.gene36335:intron | 30.0% | |
ATGGAAAAAATTCAGTTGAG+AGG | - | chr2.2:2117903-2117922 | MS.gene36335:intron | 30.0% | |
CAAGAATAGATTCAACATAC+CGG | + | chr2.2:2121412-2121431 | None:intergenic | 30.0% | |
CACAAAAATATAGGCAATGT+TGG | - | chr2.2:2121033-2121052 | MS.gene36335:intron | 30.0% | |
CATTTAGCAACTATTCAAAG+AGG | - | chr2.2:2118034-2118053 | MS.gene36335:intron | 30.0% | |
CTATTCAAAGAGGGAAATTT+GGG | - | chr2.2:2118044-2118063 | MS.gene36335:intron | 30.0% | |
GATGACAGAAATTTATCAAG+TGG | - | chr2.2:2118080-2118099 | MS.gene36335:intron | 30.0% | |
TGAATTAGTTGAAGTCGTAA+GGG | - | chr2.2:2117830-2117849 | MS.gene36335:intron | 30.0% | |
TGGAAAAAATTCAGTTGAGA+GGG | - | chr2.2:2117904-2117923 | MS.gene36335:intron | 30.0% | |
TTGTTCCTATTTACGAAACA+CGG | - | chr2.2:2118619-2118638 | MS.gene36335:intron | 30.0% | |
TTTCAAAGGACATTCAACTT+GGG | - | chr2.2:2118743-2118762 | MS.gene36335:intron | 30.0% | |
TTTCCTGTTAAAATCCATAG+CGG | - | chr2.2:2120052-2120071 | MS.gene36335:intron | 30.0% | |
TTTCTACCCAATCACAAAAA+AGG | + | chr2.2:2120688-2120707 | None:intergenic | 30.0% | |
! | AACCAATAGTTTGAAACAAC+AGG | + | chr2.2:2118451-2118470 | None:intergenic | 30.0% |
! | ATTTAATGGATACACTCAGA+TGG | - | chr2.2:2121580-2121599 | MS.gene36335:CDS | 30.0% |
! | GTGAATGTGATAGATAGTTT+TGG | + | chr2.2:2116887-2116906 | None:intergenic | 30.0% |
! | TACTTTTGCAGTCATTTCTT+GGG | + | chr2.2:2119436-2119455 | None:intergenic | 30.0% |
! | TATGATTGGCAAAACTTTTG+AGG | - | chr2.2:2119503-2119522 | MS.gene36335:intron | 30.0% |
! | TGTGATCAATTTTACATACG+AGG | - | chr2.2:2119198-2119217 | MS.gene36335:intron | 30.0% |
! | TTGATTTTGAATTCTGGGTT+TGG | - | chr2.2:2117563-2117582 | MS.gene36335:intron | 30.0% |
!! | ATCACATTCCTTTAAAATGG+CGG | - | chr2.2:2118212-2118231 | MS.gene36335:intron | 30.0% |
!! | CGTTTTGGTCACAAAAATAT+AGG | - | chr2.2:2121024-2121043 | MS.gene36335:intron | 30.0% |
!! | TTACTTTTGCAGTCATTTCT+TGG | + | chr2.2:2119437-2119456 | None:intergenic | 30.0% |
!! | TTCCTGTTGTTTCAAACTAT+TGG | - | chr2.2:2118446-2118465 | MS.gene36335:intron | 30.0% |
!! | TTCTTTTGTTGATCTAAGGT+GGG | - | chr2.2:2121195-2121214 | MS.gene36335:intron | 30.0% |
!! | TTTTTATTTGGGTCTGTAGA+CGG | + | chr2.2:2117805-2117824 | None:intergenic | 30.0% |
!!! | AATTTTCTGGCTTCATATGT+TGG | + | chr2.2:2119343-2119362 | None:intergenic | 30.0% |
!!! | ACCATTTTAAGGGTATTTTG+GGG | + | chr2.2:2120007-2120026 | None:intergenic | 30.0% |
!!! | CCCTTTTTTAGATACTTTTC+TGG | + | chr2.2:2118822-2118841 | None:intergenic | 30.0% |
!!! | CCGTACAAATTGTTTTTGAT+TGG | + | chr2.2:2118645-2118664 | None:intergenic | 30.0% |
!!! | CGAGAGTATAATGTTGATTT+TGG | - | chr2.2:2118167-2118186 | MS.gene36335:intron | 30.0% |
!!! | CGTGATTTTTAGGTTTTGTT+TGG | - | chr2.2:2117338-2117357 | MS.gene36335:intron | 30.0% |
!!! | CTTTCTCCTTTTTTGTGATT+GGG | - | chr2.2:2120679-2120698 | MS.gene36335:intron | 30.0% |
!!! | GAGTATAATGTTGATTTTGG+TGG | - | chr2.2:2118170-2118189 | MS.gene36335:intron | 30.0% |
!!! | TCTTTCTCCTTTTTTGTGAT+TGG | - | chr2.2:2120678-2120697 | MS.gene36335:intron | 30.0% |
!!! | TTTTTTGGTTTTGGAATCGT+CGG | + | chr2.2:2117020-2117039 | None:intergenic | 30.0% |
AAACACTACTACTAGATTGC+AGG | - | chr2.2:2119369-2119388 | MS.gene36335:CDS | 35.0% | |
AAAGGAAAACTGGGAAAGAA+AGG | + | chr2.2:2120430-2120449 | None:intergenic | 35.0% | |
AAATGTCGAAATTGTTAGGC+CGG | - | chr2.2:2117711-2117730 | MS.gene36335:intron | 35.0% | |
AACACTACTACTAGATTGCA+GGG | - | chr2.2:2119370-2119389 | MS.gene36335:CDS | 35.0% | |
ACAGTATCACTTGAAACAAC+AGG | + | chr2.2:2118493-2118512 | None:intergenic | 35.0% | |
ACATCGAAAGATCTGCTTAA+GGG | - | chr2.2:2118585-2118604 | MS.gene36335:intron | 35.0% | |
AGTAGTGAGTAATCTCAATC+GGG | + | chr2.2:2117960-2117979 | None:intergenic | 35.0% | |
ATAGCTGCTATAGTGAGTAA+CGG | + | chr2.2:2120103-2120122 | None:intergenic | 35.0% | |
ATATCTGCCTCAATGAATAG+TGG | + | chr2.2:2119179-2119198 | None:intergenic | 35.0% | |
CAAAAACAATTTGTACGGGA+TGG | - | chr2.2:2118647-2118666 | MS.gene36335:intron | 35.0% | |
CAAAAGTGATGAAGGAACAT+GGG | - | chr2.2:2118916-2118935 | MS.gene36335:intron | 35.0% | |
CAACTATTGAATCATGCATC+TGG | + | chr2.2:2119016-2119035 | None:intergenic | 35.0% | |
CACTATAGCAGCTATAATAG+CGG | - | chr2.2:2120108-2120127 | MS.gene36335:intron | 35.0% | |
CAGTAGTGAGTAATCTCAAT+CGG | + | chr2.2:2117961-2117980 | None:intergenic | 35.0% | |
CCAATCCTATTGTTGAAGAT+GGG | - | chr2.2:2121507-2121526 | MS.gene36335:CDS | 35.0% | |
CCATCTTCAACAATAGGATT+GGG | + | chr2.2:2121509-2121528 | None:intergenic | 35.0% | |
CTGTACATATTATGCTGGAA+AGG | - | chr2.2:2118863-2118882 | MS.gene36335:intron | 35.0% | |
CTTTCAAAGGACATTCAACT+TGG | - | chr2.2:2118742-2118761 | MS.gene36335:intron | 35.0% | |
GAAACTTCATACCTGTAACA+AGG | - | chr2.2:2117991-2118010 | MS.gene36335:intron | 35.0% | |
GAAAGAGTTGGGAAAATGTT+AGG | - | chr2.2:2119968-2119987 | MS.gene36335:intron | 35.0% | |
GATAGATGGAACATAAACAG+TGG | - | chr2.2:2119842-2119861 | MS.gene36335:CDS | 35.0% | |
GGAAAAAATTCAGTTGAGAG+GGG | - | chr2.2:2117905-2117924 | MS.gene36335:intron | 35.0% | |
GGTAACTGTACATATTATGC+TGG | - | chr2.2:2118858-2118877 | MS.gene36335:intron | 35.0% | |
GTCAAGAAGGAAGAAATTCT+GGG | - | chr2.2:2121259-2121278 | MS.gene36335:CDS | 35.0% | |
TAGTACTCAATCCCAAATAG+CGG | - | chr2.2:2119548-2119567 | MS.gene36335:CDS | 35.0% | |
TATCCTCAAAAACAAGATGC+CGG | + | chr2.2:2119134-2119153 | None:intergenic | 35.0% | |
TCAAAAGTGATGAAGGAACA+TGG | - | chr2.2:2118915-2118934 | MS.gene36335:intron | 35.0% | |
TCCACAAGAAACACACAAAT+GGG | + | chr2.2:2117772-2117791 | None:intergenic | 35.0% | |
TGATGCTGATGAATAGCATT+AGG | - | chr2.2:2117600-2117619 | MS.gene36335:intron | 35.0% | |
TGCAAGACTCTAATAAATGG+TGG | + | chr2.2:2119478-2119497 | None:intergenic | 35.0% | |
TGGCAAATGTCGAAATTGTT+AGG | - | chr2.2:2117707-2117726 | MS.gene36335:intron | 35.0% | |
TTAAAGACAGTGATGAAGCT+AGG | - | chr2.2:2121231-2121250 | MS.gene36335:CDS | 35.0% | |
TTCCACAAGAAACACACAAA+TGG | + | chr2.2:2117773-2117792 | None:intergenic | 35.0% | |
TTCTTTCCTCTTACCTTCTT+TGG | + | chr2.2:2120587-2120606 | None:intergenic | 35.0% | |
TTTGAGGATAACTATGACAC+TGG | - | chr2.2:2119144-2119163 | MS.gene36335:intron | 35.0% | |
! | ATATCTGGTTTGATGAGTGA+GGG | + | chr2.2:2121471-2121490 | None:intergenic | 35.0% |
! | ATCGTGTTTTCTGTGTTTTG+CGG | - | chr2.2:2119934-2119953 | MS.gene36335:intron | 35.0% |
! | ATTTTCCAACAAATGGATGC+TGG | + | chr2.2:2121067-2121086 | None:intergenic | 35.0% |
! | GTTCTTTTGTTGATCTAAGG+TGG | - | chr2.2:2121194-2121213 | MS.gene36335:intron | 35.0% |
! | TGATTGGTCAAAAGTGATGA+AGG | - | chr2.2:2118908-2118927 | MS.gene36335:intron | 35.0% |
! | TTTTGTGATTGGGTAGAAAC+CGG | - | chr2.2:2120689-2120708 | MS.gene36335:intron | 35.0% |
!! | AATCCGCTATGGATTTTAAC+AGG | + | chr2.2:2120058-2120077 | None:intergenic | 35.0% |
!! | TCTTTTGTTGATCTAAGGTG+GGG | - | chr2.2:2121196-2121215 | MS.gene36335:intron | 35.0% |
!! | TTCAAACTCCGCCATTTTAA+AGG | + | chr2.2:2118223-2118242 | None:intergenic | 35.0% |
!!! | CAGTATAGTGTTGATTTTGG+TGG | - | chr2.2:2118300-2118319 | MS.gene36335:intron | 35.0% |
!!! | CCATTTTAAGGGTATTTTGG+GGG | + | chr2.2:2120006-2120025 | None:intergenic | 35.0% |
!!! | CGACAGTATAGTGTTGATTT+TGG | - | chr2.2:2118297-2118316 | MS.gene36335:intron | 35.0% |
!!! | GATTTGATAGTGTGTGGTTT+TGG | - | chr2.2:2118409-2118428 | MS.gene36335:intron | 35.0% |
!!! | TGGATTTTGGAAGTGTTGAT+TGG | - | chr2.2:2118892-2118911 | MS.gene36335:intron | 35.0% |
AAGAAAGGTTGAAGCTCTGT+TGG | + | chr2.2:2117065-2117084 | None:intergenic | 40.0% | |
AAGTTGTACTTGCTTCACTG+TGG | - | chr2.2:2118241-2118260 | MS.gene36335:intron | 40.0% | |
AAGTTGTACTTGCTTGACTG+TGG | - | chr2.2:2118371-2118390 | MS.gene36335:intron | 40.0% | |
ACAAGAAACACACAAATGGG+AGG | + | chr2.2:2117769-2117788 | None:intergenic | 40.0% | |
ACATAAACAGTGGAAGACGA+TGG | - | chr2.2:2119852-2119871 | MS.gene36335:CDS | 40.0% | |
ACGAAATAGGAGACCAGAAA+AGG | + | chr2.2:2120448-2120467 | None:intergenic | 40.0% | |
AGTTGAAGTCGTAAGGGATT+TGG | - | chr2.2:2117836-2117855 | MS.gene36335:intron | 40.0% | |
ATAGGACCAAAGAAGGTAAG+AGG | - | chr2.2:2120578-2120597 | MS.gene36335:intron | 40.0% | |
ATCTTCTGTTAGTGTCCTAG+CGG | - | chr2.2:2120518-2120537 | MS.gene36335:intron | 40.0% | |
ATGAAGCACGAATGCAAACA+CGG | + | chr2.2:2120560-2120579 | None:intergenic | 40.0% | |
ATGGCGAGTTTGAGAAAGAA+AGG | + | chr2.2:2117080-2117099 | None:intergenic | 40.0% | |
ATGGGATTAAGGACCTTAGT+CGG | - | chr2.2:2118934-2118953 | MS.gene36335:intron | 40.0% | |
ATTGGCCGTGTTTCGTAAAT+AGG | + | chr2.2:2118627-2118646 | None:intergenic | 40.0% | |
ATTGTTGAAGATGGGCGATA+TGG | - | chr2.2:2121515-2121534 | MS.gene36335:CDS | 40.0% | |
CAATATATGTAGACACCGCT+AGG | + | chr2.2:2120536-2120555 | None:intergenic | 40.0% | |
CACAACATTTCCAGAATAGC+CGG | - | chr2.2:2121390-2121409 | MS.gene36335:CDS | 40.0% | |
CAGAGAAGAGAGAAAGAGTT+GGG | - | chr2.2:2119957-2119976 | MS.gene36335:intron | 40.0% | |
CAGTTACCATCAACATATGC+AGG | + | chr2.2:2118846-2118865 | None:intergenic | 40.0% | |
CATCGAAAGATCTGCTTAAG+GGG | - | chr2.2:2118586-2118605 | MS.gene36335:intron | 40.0% | |
CCCAATCCTATTGTTGAAGA+TGG | - | chr2.2:2121506-2121525 | MS.gene36335:CDS | 40.0% | |
CCCATCTTCAACAATAGGAT+TGG | + | chr2.2:2121510-2121529 | None:intergenic | 40.0% | |
CCCCCAAAATACCCTTAAAA+TGG | - | chr2.2:2120003-2120022 | MS.gene36335:intron | 40.0% | |
CTAAACCATAGTGGTCACTA+CGG | + | chr2.2:2120167-2120186 | None:intergenic | 40.0% | |
GAAGAGAAGAAGAAATGCGA+CGG | + | chr2.2:2117119-2117138 | None:intergenic | 40.0% | |
GACATCGAAAGATCTGCTTA+AGG | - | chr2.2:2118584-2118603 | MS.gene36335:intron | 40.0% | |
GAGACCAGAAAAGGAAAACT+GGG | + | chr2.2:2120439-2120458 | None:intergenic | 40.0% | |
GATAACTATGACACTGGTAC+TGG | - | chr2.2:2119150-2119169 | MS.gene36335:intron | 40.0% | |
GATGAAGACCATGACGAAAT+AGG | + | chr2.2:2120461-2120480 | None:intergenic | 40.0% | |
GATGAAGGAACATGGGATTA+AGG | - | chr2.2:2118923-2118942 | MS.gene36335:intron | 40.0% | |
GGTCAAGAAGGAAGAAATTC+TGG | - | chr2.2:2121258-2121277 | MS.gene36335:CDS | 40.0% | |
GTAGTGAGTAATCTCAATCG+GGG | + | chr2.2:2117959-2117978 | None:intergenic | 40.0% | |
GTTGAAGTCGTAAGGGATTT+GGG | - | chr2.2:2117837-2117856 | MS.gene36335:intron | 40.0% | |
GTTGATATCGAAGAACTGTG+TGG | - | chr2.2:2121290-2121309 | MS.gene36335:CDS | 40.0% | |
TATCGCCCATCTTCAACAAT+AGG | + | chr2.2:2121515-2121534 | None:intergenic | 40.0% | |
TCCATAAGTCCTAGCTCAAT+TGG | - | chr2.2:2117687-2117706 | MS.gene36335:intron | 40.0% | |
TCCATCCAAACCAAAAAACG+CGG | + | chr2.2:2117224-2117243 | None:intergenic | 40.0% | |
TCCCATTTGTGTGTTTCTTG+TGG | - | chr2.2:2117768-2117787 | MS.gene36335:intron | 40.0% | |
TGGTGACATGTATATATGGG+AGG | + | chr2.2:2120391-2120410 | None:intergenic | 40.0% | |
TGTTTGCATTCGTGCTTCAT+AGG | - | chr2.2:2120560-2120579 | MS.gene36335:intron | 40.0% | |
TTATGCTGGAAAGGACTTTG+TGG | - | chr2.2:2118872-2118891 | MS.gene36335:intron | 40.0% | |
TTGAGCTAGGACTTATGGAT+TGG | + | chr2.2:2117686-2117705 | None:intergenic | 40.0% | |
TTTGTGATTGGGTAGAAACC+GGG | - | chr2.2:2120690-2120709 | MS.gene36335:intron | 40.0% | |
! | AAGTTCATTTTGAGCGTCTG+AGG | + | chr2.2:2120227-2120246 | None:intergenic | 40.0% |
! | AGATACTTTTCTGGATGCCT+AGG | + | chr2.2:2118813-2118832 | None:intergenic | 40.0% |
! | ATTCAACATACCGGCTATTC+TGG | + | chr2.2:2121403-2121422 | None:intergenic | 40.0% |
! | CATATCTGGTTTGATGAGTG+AGG | + | chr2.2:2121472-2121491 | None:intergenic | 40.0% |
! | CTTTCCCAGTTTTCCTTTTC+TGG | - | chr2.2:2120432-2120451 | MS.gene36335:intron | 40.0% |
! | GACATTCAACTTGGGTTTTG+CGG | - | chr2.2:2118751-2118770 | MS.gene36335:intron | 40.0% |
! | GGAAAGGACTTTGTGGATTT+TGG | - | chr2.2:2118879-2118898 | MS.gene36335:intron | 40.0% |
! | GGATTGTTTCTCTTTCACCT+AGG | - | chr2.2:2118793-2118812 | MS.gene36335:intron | 40.0% |
! | TGGTTTGGATGGACTTGATT+CGG | - | chr2.2:2117231-2117250 | MS.gene36335:CDS | 40.0% |
! | TTGGACTTTGGTTCATTGCT+CGG | - | chr2.2:2118685-2118704 | MS.gene36335:intron | 40.0% |
! | TTTTCCATACGCAAGAGTCA+GGG | + | chr2.2:2117891-2117910 | None:intergenic | 40.0% |
! | TTTTTCCATACGCAAGAGTC+AGG | + | chr2.2:2117892-2117911 | None:intergenic | 40.0% |
!! | AGGTTTGAAGAAAGCGTTAG+AGG | + | chr2.2:2117191-2117210 | None:intergenic | 40.0% |
!! | CTTTTGTTGATCTAAGGTGG+GGG | - | chr2.2:2121197-2121216 | MS.gene36335:intron | 40.0% |
!! | GCGAATGATTTGATAGTGTG+TGG | - | chr2.2:2118403-2118422 | MS.gene36335:intron | 40.0% |
!! | GGAGTTGGTAATTTCGTGTA+TGG | - | chr2.2:2117395-2117414 | MS.gene36335:intron | 40.0% |
!!! | CAAAACTTTTGAGGCTGACA+CGG | - | chr2.2:2119512-2119531 | MS.gene36335:CDS | 40.0% |
!!! | GATGGACTTGATTCGGATTT+TGG | - | chr2.2:2117238-2117257 | MS.gene36335:CDS | 40.0% |
AAGAACCAGCGGAAGATAGA+TGG | - | chr2.2:2119828-2119847 | MS.gene36335:CDS | 45.0% | |
AAGCTAGGATCAGGTCAAGA+AGG | - | chr2.2:2121246-2121265 | MS.gene36335:CDS | 45.0% | |
AAGGGACCTGCATATGTTGA+TGG | - | chr2.2:2118837-2118856 | MS.gene36335:intron | 45.0% | |
AATCTCAATCGGGGAACTTG+TGG | + | chr2.2:2117950-2117969 | None:intergenic | 45.0% | |
ACAGTGATGAAGCTAGGATC+AGG | - | chr2.2:2121237-2121256 | MS.gene36335:CDS | 45.0% | |
ACTAGTAAACAGTTGCTGGC+TGG | - | chr2.2:2120875-2120894 | MS.gene36335:intron | 45.0% | |
AGAGAAACAATCCGTGTGTC+TGG | + | chr2.2:2118786-2118805 | None:intergenic | 45.0% | |
ATCTCAATCGGGGAACTTGT+GGG | + | chr2.2:2117949-2117968 | None:intergenic | 45.0% | |
ATGTTCCATCTATCTTCCGC+TGG | + | chr2.2:2119836-2119855 | None:intergenic | 45.0% | |
CAATGAGAGCAAAGAACCAG+CGG | - | chr2.2:2119817-2119836 | MS.gene36335:CDS | 45.0% | |
CAGACACACCTAAACCATAG+TGG | + | chr2.2:2120176-2120195 | None:intergenic | 45.0% | |
CGACATTTGCCAATTGAGCT+AGG | + | chr2.2:2117699-2117718 | None:intergenic | 45.0% | |
CGTAGTGACCACTATGGTTT+AGG | - | chr2.2:2120165-2120184 | MS.gene36335:intron | 45.0% | |
CTATCACATTCACCGGAACA+CGG | - | chr2.2:2116894-2116913 | MS.gene36335:CDS | 45.0% | |
CTGGTGACCACTATTCATTG+AGG | - | chr2.2:2119169-2119188 | MS.gene36335:intron | 45.0% | |
GAAGTCCAGCATCCATTTGT+TGG | - | chr2.2:2121059-2121078 | MS.gene36335:intron | 45.0% | |
GCAGAGAAGAGAGAAAGAGT+TGG | - | chr2.2:2119956-2119975 | MS.gene36335:intron | 45.0% | |
GCCAATTGAGCTAGGACTTA+TGG | + | chr2.2:2117691-2117710 | None:intergenic | 45.0% | |
GGAGACCAGAAAAGGAAAAC+TGG | + | chr2.2:2120440-2120459 | None:intergenic | 45.0% | |
GGTAAAGGCAGATCGAAACA+TGG | - | chr2.2:2118546-2118565 | MS.gene36335:intron | 45.0% | |
GTGCTTCATAGGACCAAAGA+AGG | - | chr2.2:2120571-2120590 | MS.gene36335:intron | 45.0% | |
TATCGAAGAACTGTGTGGAC+CGG | - | chr2.2:2121295-2121314 | MS.gene36335:CDS | 45.0% | |
TCATTGTAGCGTCAAAGCGA+AGG | + | chr2.2:2120253-2120272 | None:intergenic | 45.0% | |
TCTGGTCTCCTATTTCGTCA+TGG | - | chr2.2:2120450-2120469 | MS.gene36335:intron | 45.0% | |
TGAACCAAAGTCCAAAGCTG+TGG | + | chr2.2:2118680-2118699 | None:intergenic | 45.0% | |
TGGGATTAAGGACCTTAGTC+GGG | - | chr2.2:2118935-2118954 | MS.gene36335:intron | 45.0% | |
TTCAGGATGTTGATCCCGAA+TGG | - | chr2.2:2117511-2117530 | MS.gene36335:intron | 45.0% | |
TTGTACTTGCTTCACTGTGG+AGG | - | chr2.2:2118244-2118263 | MS.gene36335:intron | 45.0% | |
TTTGGGGGTTACCTTGTTAC+AGG | + | chr2.2:2118005-2118024 | None:intergenic | 45.0% | |
! | CAATTTGTACGGGATGGGTT+TGG | - | chr2.2:2118653-2118672 | MS.gene36335:intron | 45.0% |
!! | ATCGAACAAGCTCTGAAAGC+TGG | - | chr2.2:2119105-2119124 | MS.gene36335:intron | 45.0% |
!! | GGCGATATGGTTTGTTCCAA+CGG | - | chr2.2:2121528-2121547 | MS.gene36335:CDS | 45.0% |
!! | TAGCGGATTCTAATCCGCTA+TGG | + | chr2.2:2120069-2120088 | None:intergenic | 45.0% |
!! | TATGGTTTGTTCCAACGGCT+TGG | - | chr2.2:2121533-2121552 | MS.gene36335:CDS | 45.0% |
!! | TCGAACAAGCTCTGAAAGCT+GGG | - | chr2.2:2119106-2119125 | MS.gene36335:intron | 45.0% |
!!! | GATTCGGATTTTGGTGCTCT+TGG | - | chr2.2:2117247-2117266 | MS.gene36335:CDS | 45.0% |
!!! | GTTCCGGCATCTTGTTTTTG+AGG | - | chr2.2:2119128-2119147 | MS.gene36335:intron | 45.0% |
AAAGTTCCAACCCCCAGGAA+CGG | + | chr2.2:2120922-2120941 | None:intergenic | 50.0% | |
AACCATAGTGGTCACTACGG+TGG | + | chr2.2:2120164-2120183 | None:intergenic | 50.0% | |
ACCATAGTGGTCACTACGGT+GGG | + | chr2.2:2120163-2120182 | None:intergenic | 50.0% | |
ACTTGAAAGTTCCAACCCCC+AGG | + | chr2.2:2120927-2120946 | None:intergenic | 50.0% | |
AGAAATGCGACGGTGAGACA+CGG | + | chr2.2:2117109-2117128 | None:intergenic | 50.0% | |
AGAGTGTGTATGCCGTGTTC+CGG | + | chr2.2:2116909-2116928 | None:intergenic | 50.0% | |
AGCACGAGCAGGATCATATC+TGG | + | chr2.2:2121486-2121505 | None:intergenic | 50.0% | |
AGCGCAAAGAGACTTACAGC+AGG | + | chr2.2:2117278-2117297 | None:intergenic | 50.0% | |
AGCGGTACCGTTCAAGATAG+CGG | + | chr2.2:2120134-2120153 | None:intergenic | 50.0% | |
AGTGAGTAACGGTAGCAGAG+CGG | + | chr2.2:2120092-2120111 | None:intergenic | 50.0% | |
ATAGCGGCCGCTATCTTGAA+CGG | - | chr2.2:2120124-2120143 | MS.gene36335:intron | 50.0% | |
ATCGAAGAACTGTGTGGACC+GGG | - | chr2.2:2121296-2121315 | MS.gene36335:CDS | 50.0% | |
ATCGAGAGTGGCGCTTTCAA+AGG | - | chr2.2:2118729-2118748 | MS.gene36335:intron | 50.0% | |
ATGGGAGGACATGCATATGC+AGG | + | chr2.2:2120376-2120395 | None:intergenic | 50.0% | |
ATGGGTTTGGACCACAGCTT+TGG | - | chr2.2:2118666-2118685 | MS.gene36335:intron | 50.0% | |
ATTGTTAGGCCGGATATCCG+TGG | - | chr2.2:2117721-2117740 | MS.gene36335:intron | 50.0% | |
ATTTGGGCCCCTTAAGCAAG+TGG | - | chr2.2:2117853-2117872 | MS.gene36335:intron | 50.0% | |
ATTTGGGTCTGTAGACGGAG+TGG | + | chr2.2:2117800-2117819 | None:intergenic | 50.0% | |
CATACGCAAGAGTCAGGGAA+CGG | + | chr2.2:2117886-2117905 | None:intergenic | 50.0% | |
CCACTCTCGATCATCAGATC+CGG | + | chr2.2:2118720-2118739 | None:intergenic | 50.0% | |
GAAAGATCTGCTTAAGGGGC+TGG | - | chr2.2:2118590-2118609 | MS.gene36335:intron | 50.0% | |
GAGGTCCCAGGTTTGAATCT+AGG | + | chr2.2:2117750-2117769 | None:intergenic | 50.0% | |
GCGCAAAGAGACTTACAGCA+GGG | + | chr2.2:2117277-2117296 | None:intergenic | 50.0% | |
GGGGTCCTAGATTCAAACCT+GGG | - | chr2.2:2117742-2117761 | MS.gene36335:intron | 50.0% | |
TCTCAATCGGGGAACTTGTG+GGG | + | chr2.2:2117948-2117967 | None:intergenic | 50.0% | |
TGGGGTCCTAGATTCAAACC+TGG | - | chr2.2:2117741-2117760 | MS.gene36335:intron | 50.0% | |
TTGTTAGGCCGGATATCCGT+GGG | - | chr2.2:2117722-2117741 | MS.gene36335:intron | 50.0% | |
! | AAGCATGGTGGGGAGTTAGA+GGG | - | chr2.2:2121321-2121340 | MS.gene36335:CDS | 50.0% |
! | ACCCATGCCACTTGCTTAAG+GGG | + | chr2.2:2117863-2117882 | None:intergenic | 50.0% |
! | CATTGCTCGGTGGCTTAAAC+CGG | - | chr2.2:2118698-2118717 | MS.gene36335:intron | 50.0% |
! | CTGAGGTGTCTAACACGTGT+CGG | + | chr2.2:2120210-2120229 | None:intergenic | 50.0% |
! | CTGGTTTGATGAGTGAGGGA+AGG | + | chr2.2:2121467-2121486 | None:intergenic | 50.0% |
! | GACCCATGCCACTTGCTTAA+GGG | + | chr2.2:2117864-2117883 | None:intergenic | 50.0% |
! | GACTTTGGTTCATTGCTCGG+TGG | - | chr2.2:2118688-2118707 | MS.gene36335:intron | 50.0% |
! | GGTTTGAATCTAGGACCCCA+CGG | + | chr2.2:2117741-2117760 | None:intergenic | 50.0% |
! | TTGTTCCAACGGCTTGGCTT+GGG | - | chr2.2:2121539-2121558 | MS.gene36335:CDS | 50.0% |
! | TTTGTTCCAACGGCTTGGCT+TGG | - | chr2.2:2121538-2121557 | MS.gene36335:CDS | 50.0% |
!! | AAGCTCTGAAAGCTGGGTTC+CGG | - | chr2.2:2119112-2119131 | MS.gene36335:intron | 50.0% |
!! | ATCGTCGGCGTTGATTAGGT+CGG | + | chr2.2:2117005-2117024 | None:intergenic | 50.0% |
!! | TGGAATCGTCGGCGTTGATT+AGG | + | chr2.2:2117009-2117028 | None:intergenic | 50.0% |
!! | TGGACCACAGCTTTGGACTT+TGG | - | chr2.2:2118673-2118692 | MS.gene36335:intron | 50.0% |
!!! | GCCGCGTTTTTTGGTTTGGA+TGG | - | chr2.2:2117220-2117239 | MS.gene36335:CDS | 50.0% |
AACTTGTGGGGGACACAAGG+CGG | + | chr2.2:2117936-2117955 | None:intergenic | 55.0% | |
ACACACAAATGGGAGGTCCC+AGG | + | chr2.2:2117762-2117781 | None:intergenic | 55.0% | |
ACAGTGGAAGACGATGGCAG+CGG | - | chr2.2:2119858-2119877 | MS.gene36335:CDS | 55.0% | |
ACCCACCGTAGTGACCACTA+TGG | - | chr2.2:2120159-2120178 | MS.gene36335:intron | 55.0% | |
AGGCTGACACGGCTACGTTT+AGG | - | chr2.2:2119523-2119542 | MS.gene36335:CDS | 55.0% | |
CCGGATCTGATGATCGAGAG+TGG | - | chr2.2:2118717-2118736 | MS.gene36335:intron | 55.0% | |
CGACCCCAAAAGTGGGATAG+CGG | - | chr2.2:2119582-2119601 | MS.gene36335:CDS | 55.0% | |
CGGTGAGACACGGAACGTAA+TGG | + | chr2.2:2117099-2117118 | None:intergenic | 55.0% | |
CGTTCCCTGACTCTTGCGTA+TGG | - | chr2.2:2117884-2117903 | MS.gene36335:intron | 55.0% | |
CTCAATCGGGGAACTTGTGG+GGG | + | chr2.2:2117947-2117966 | None:intergenic | 55.0% | |
CTGTCTTTGCTGCCGTTCCT+GGG | - | chr2.2:2120907-2120926 | MS.gene36335:intron | 55.0% | |
GACCCCAAAAGTGGGATAGC+GGG | - | chr2.2:2119583-2119602 | MS.gene36335:CDS | 55.0% | |
GCCCCTTAAGCAAGTGGCAT+GGG | - | chr2.2:2117859-2117878 | MS.gene36335:intron | 55.0% | |
GCTGCGACGGTTATGGCAAT+TGG | - | chr2.2:2119892-2119911 | MS.gene36335:CDS | 55.0% | |
GGCAAGCTATGCCAGACACA+CGG | - | chr2.2:2118772-2118791 | MS.gene36335:intron | 55.0% | |
GTTTACCCAAGCCAAGCCGT+TGG | + | chr2.2:2121547-2121566 | None:intergenic | 55.0% | |
TAACGGTAGCAGAGCGGTAG+CGG | + | chr2.2:2120086-2120105 | None:intergenic | 55.0% | |
TCGAAGAACTGTGTGGACCG+GGG | - | chr2.2:2121297-2121316 | MS.gene36335:CDS | 55.0% | |
TCTGTCTTTGCTGCCGTTCC+TGG | - | chr2.2:2120906-2120925 | MS.gene36335:intron | 55.0% | |
TGTCTTTGCTGCCGTTCCTG+GGG | - | chr2.2:2120908-2120927 | MS.gene36335:intron | 55.0% | |
TGTTAGGCCGGATATCCGTG+GGG | - | chr2.2:2117723-2117742 | MS.gene36335:intron | 55.0% | |
! | ATAGGATTGGGAGCACGAGC+AGG | + | chr2.2:2121497-2121516 | None:intergenic | 55.0% |
! | GAAGCATGGTGGGGAGTTAG+AGG | - | chr2.2:2121320-2121339 | MS.gene36335:CDS | 55.0% |
! | GGACCCATGCCACTTGCTTA+AGG | + | chr2.2:2117865-2117884 | None:intergenic | 55.0% |
! | TCCTCCCGCTATCCCACTTT+TGG | + | chr2.2:2119590-2119609 | None:intergenic | 55.0% |
! | TCTAGGACCCCACGGATATC+CGG | + | chr2.2:2117733-2117752 | None:intergenic | 55.0% |
!! | CCTCCCGCTATCCCACTTTT+GGG | + | chr2.2:2119589-2119608 | None:intergenic | 55.0% |
!! | CTCCCGCTATCCCACTTTTG+GGG | + | chr2.2:2119588-2119607 | None:intergenic | 55.0% |
!!! | ACGCGCCGCGTTTTTTGGTT+TGG | - | chr2.2:2117216-2117235 | MS.gene36335:CDS | 55.0% |
!!! | CGCTATCCCACTTTTGGGGT+CGG | + | chr2.2:2119584-2119603 | None:intergenic | 55.0% |
AAAAACGCGGCGCGTGAAGC+AGG | + | chr2.2:2117211-2117230 | None:intergenic | 60.0% | |
ACTTGTGGGGGACACAAGGC+GGG | + | chr2.2:2117935-2117954 | None:intergenic | 60.0% | |
ATTGGCGGCTGCGACGGTTA+TGG | - | chr2.2:2119885-2119904 | MS.gene36335:CDS | 60.0% | |
CAGCGTCCGACCCCAAAAGT+GGG | - | chr2.2:2119575-2119594 | MS.gene36335:CDS | 60.0% | |
CCACCACCGCCATGTTAGAG+CGG | - | chr2.2:2116942-2116961 | MS.gene36335:CDS | 60.0% | |
CGAAGAACTGTGTGGACCGG+GGG | - | chr2.2:2121298-2121317 | MS.gene36335:CDS | 60.0% | |
GACGATGGCAGCGGCACAAT+TGG | - | chr2.2:2119867-2119886 | MS.gene36335:CDS | 60.0% | |
GAGGGTCCGCTCTAACATGG+CGG | + | chr2.2:2116951-2116970 | None:intergenic | 60.0% | |
GATGGCAGCGGCACAATTGG+CGG | - | chr2.2:2119870-2119889 | MS.gene36335:CDS | 60.0% | |
GGAGAGGGTCCGCTCTAACA+TGG | + | chr2.2:2116954-2116973 | None:intergenic | 60.0% | |
GGCCCCTTAAGCAAGTGGCA+TGG | - | chr2.2:2117858-2117877 | MS.gene36335:intron | 60.0% | |
GGGAACTCCCACCAGTTGCT+GGG | - | chr2.2:2121441-2121460 | MS.gene36335:CDS | 60.0% | |
GGGAACTTGTGGGGGACACA+AGG | + | chr2.2:2117939-2117958 | None:intergenic | 60.0% | |
GTCTTTGCTGCCGTTCCTGG+GGG | - | chr2.2:2120909-2120928 | MS.gene36335:intron | 60.0% | |
TGGGAACTCCCACCAGTTGC+TGG | - | chr2.2:2121440-2121459 | MS.gene36335:CDS | 60.0% | |
! | CACTACGGTGGGTGTCGTAG+CGG | + | chr2.2:2120152-2120171 | None:intergenic | 60.0% |
! | CTCTAACATGGCGGTGGTGG+TGG | + | chr2.2:2116942-2116961 | None:intergenic | 60.0% |
!! | CCCAAAAGTGGGATAGCGGG+AGG | - | chr2.2:2119586-2119605 | MS.gene36335:CDS | 60.0% |
!! | GCGGTGGTGGTGGTTTGCTT+GGG | + | chr2.2:2116932-2116951 | None:intergenic | 60.0% |
!!! | GCTTCACGCGCCGCGTTTTT+TGG | - | chr2.2:2117211-2117230 | MS.gene36335:CDS | 60.0% |
ACTCCCCACCATGCTTCCCC+CGG | + | chr2.2:2121317-2121336 | None:intergenic | 65.0% | |
AGGGAAGGCCCAGCAACTGG+TGG | + | chr2.2:2121452-2121471 | None:intergenic | 65.0% | |
AGTCGCCGTGTGAGTTGCCG+CGG | + | chr2.2:2116982-2117001 | None:intergenic | 65.0% | |
CCGCTCTAACATGGCGGTGG+TGG | + | chr2.2:2116945-2116964 | None:intergenic | 65.0% | |
GACGCTGCGCGCCGCTATTT+GGG | + | chr2.2:2119562-2119581 | None:intergenic | 65.0% | |
GCAGCGTCCGACCCCAAAAG+TGG | - | chr2.2:2119574-2119593 | MS.gene36335:CDS | 65.0% | |
GGCACAATTGGCGGCTGCGA+CGG | - | chr2.2:2119879-2119898 | MS.gene36335:CDS | 65.0% | |
GGGAAGGCCCAGCAACTGGT+GGG | + | chr2.2:2121451-2121470 | None:intergenic | 65.0% | |
GGTCCGCTCTAACATGGCGG+TGG | + | chr2.2:2116948-2116967 | None:intergenic | 65.0% | |
GTGAGGGAAGGCCCAGCAAC+TGG | + | chr2.2:2121455-2121474 | None:intergenic | 65.0% | |
TGTGTGGACCGGGGGAAGCA+TGG | - | chr2.2:2121306-2121325 | MS.gene36335:CDS | 65.0% | |
TTGCTGCCGTTCCTGGGGGT+TGG | - | chr2.2:2120913-2120932 | MS.gene36335:intron | 65.0% | |
! | TGGACCGGGGGAAGCATGGT+GGG | - | chr2.2:2121310-2121329 | MS.gene36335:CDS | 65.0% |
!! | GGCGGTGGTGGTGGTTTGCT+TGG | + | chr2.2:2116933-2116952 | None:intergenic | 65.0% |
GGACGCTGCGCGCCGCTATT+TGG | + | chr2.2:2119563-2119582 | None:intergenic | 70.0% | |
TCCCGCCGCGGCAACTCACA+CGG | - | chr2.2:2116974-2116993 | MS.gene36335:CDS | 70.0% | |
! | GGACCGGGGGAAGCATGGTG+GGG | - | chr2.2:2121311-2121330 | MS.gene36335:CDS | 70.0% |
! | GTGGACCGGGGGAAGCATGG+TGG | - | chr2.2:2121309-2121328 | MS.gene36335:CDS | 70.0% |
AGTTGCCGCGGCGGGAGGAG+AGG | + | chr2.2:2116970-2116989 | None:intergenic | 75.0% | |
CGCCGTGTGAGTTGCCGCGG+CGG | + | chr2.2:2116979-2116998 | None:intergenic | 75.0% | |
GCCGTGTGAGTTGCCGCGGC+GGG | + | chr2.2:2116978-2116997 | None:intergenic | 75.0% | |
GTGTGAGTTGCCGCGGCGGG+AGG | + | chr2.2:2116975-2116994 | None:intergenic | 75.0% | |
GTTGCCGCGGCGGGAGGAGA+GGG | + | chr2.2:2116969-2116988 | None:intergenic | 75.0% | |
! | CGGACCCTCTCCTCCCGCCG+CGG | - | chr2.2:2116962-2116981 | MS.gene36335:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 2116875 | 2121628 | 2116875 | ID=MS.gene36335 |
chr2.2 | mRNA | 2116875 | 2121628 | 2116875 | ID=MS.gene36335.t1;Parent=MS.gene36335 |
chr2.2 | exon | 2121223 | 2121628 | 2121223 | ID=MS.gene36335.t1.exon1;Parent=MS.gene36335.t1 |
chr2.2 | CDS | 2121223 | 2121628 | 2121223 | ID=cds.MS.gene36335.t1;Parent=MS.gene36335.t1 |
chr2.2 | exon | 2119506 | 2119950 | 2119506 | ID=MS.gene36335.t1.exon2;Parent=MS.gene36335.t1 |
chr2.2 | CDS | 2119506 | 2119950 | 2119506 | ID=cds.MS.gene36335.t1;Parent=MS.gene36335.t1 |
chr2.2 | exon | 2119284 | 2119399 | 2119284 | ID=MS.gene36335.t1.exon3;Parent=MS.gene36335.t1 |
chr2.2 | CDS | 2119284 | 2119399 | 2119284 | ID=cds.MS.gene36335.t1;Parent=MS.gene36335.t1 |
chr2.2 | exon | 2116875 | 2117290 | 2116875 | ID=MS.gene36335.t1.exon4;Parent=MS.gene36335.t1 |
chr2.2 | CDS | 2116875 | 2117290 | 2116875 | ID=cds.MS.gene36335.t1;Parent=MS.gene36335.t1 |
Gene Sequence |
Protein sequence |