Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36364.t1 | XP_003597674.1 | 96.2 | 1140 | 38 | 1 | 1 | 1135 | 1 | 1140 | 0.00E+00 | 2116.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36364.t1 | Q0WVF8 | 45.3 | 1153 | 590 | 12 | 1 | 1133 | 2 | 1133 | 1.1e-268 | 927.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36364.t1 | G7IHZ6 | 96.2 | 1140 | 38 | 1 | 1 | 1135 | 1 | 1140 | 0.0e+00 | 2116.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052584 | MS.gene36364 | 0.81136 | 7.28E-51 | -1.69E-46 |
MS.gene053226 | MS.gene36364 | 0.834848 | 2.36E-56 | -1.69E-46 |
MS.gene055166 | MS.gene36364 | 0.837135 | 6.21E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene91488 | MS.gene36364 | PPI |
MS.gene35361 | MS.gene36364 | PPI |
MS.gene073095 | MS.gene36364 | PPI |
MS.gene94650 | MS.gene36364 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36364.t1 | MTR_2g100870 | 96.228 | 1140 | 38 | 1 | 1 | 1135 | 1 | 1140 | 0.0 | 2244 |
MS.gene36364.t1 | MTR_5g085950 | 85.526 | 1140 | 159 | 2 | 1 | 1135 | 1 | 1139 | 0.0 | 1927 |
MS.gene36364.t1 | MTR_5g055460 | 83.333 | 48 | 8 | 0 | 170 | 217 | 17 | 64 | 1.57e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36364.t1 | AT5G48120 | 45.186 | 1153 | 591 | 12 | 1 | 1133 | 2 | 1133 | 0.0 | 937 |
MS.gene36364.t1 | AT5G48120 | 45.186 | 1153 | 591 | 12 | 1 | 1133 | 2 | 1133 | 0.0 | 937 |
MS.gene36364.t1 | AT5G48120 | 45.186 | 1153 | 591 | 12 | 1 | 1133 | 2 | 1133 | 0.0 | 937 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAGAATGATGGATAAAT+TGG | 0.076592 | 2.2:-2457758 | MS.gene36364:CDS |
AGACACTTTATATACTTATT+TGG | 0.080986 | 2.2:-2458082 | MS.gene36364:CDS |
TGCAGAAGCCCTCTTATATT+TGG | 0.180661 | 2.2:+2455335 | None:intergenic |
ATATTCTCAAATGTTGATTT+TGG | 0.185446 | 2.2:+2456649 | None:intergenic |
TGCAATTTGCTGTGGATATT+TGG | 0.195724 | 2.2:-2455781 | MS.gene36364:CDS |
CATGAGACGTTAAATTTCTT+TGG | 0.197723 | 2.2:+2456087 | None:intergenic |
TCAATTATCATAGAAGATTT+TGG | 0.200733 | 2.2:-2456610 | MS.gene36364:CDS |
TGAAACTGCTGTTCAGCTTT+TGG | 0.210397 | 2.2:-2456066 | MS.gene36364:CDS |
GACACTTTATATACTTATTT+GGG | 0.214061 | 2.2:-2458081 | MS.gene36364:CDS |
TCAACTACAACTTCGTTCTT+TGG | 0.238088 | 2.2:+2458009 | None:intergenic |
CTTGCAAAATGGCGGTATTT+TGG | 0.239622 | 2.2:-2457710 | MS.gene36364:CDS |
GCTTCTACTTTGAGTGAAAA+AGG | 0.241798 | 2.2:+2456436 | None:intergenic |
TATACTGAATGAAGCTAAAA+AGG | 0.249796 | 2.2:-2454391 | MS.gene36364:intron |
TATATTTGGAATGTGTGTTT+TGG | 0.263185 | 2.2:+2455349 | None:intergenic |
TTATATTCAACACAAAATTA+TGG | 0.275586 | 2.2:-2455178 | MS.gene36364:CDS |
CAAAATATACAGGGGCTATT+TGG | 0.282479 | 2.2:-2458116 | MS.gene36364:CDS |
TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 2.2:-2455282 | MS.gene36364:CDS |
GCCTCACAAAATGTTAATTT+CGG | 0.283475 | 2.2:-2457688 | MS.gene36364:CDS |
GCTGTCTTATTTAATGCCTT+TGG | 0.286607 | 2.2:-2457562 | MS.gene36364:CDS |
TACACAGACCTCGGATAAAT+TGG | 0.288390 | 2.2:+2456339 | None:intergenic |
GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 2.2:-2455281 | MS.gene36364:CDS |
CACTTGCAGGTTCAATCTTT+AGG | 0.305593 | 2.2:-2461556 | MS.gene36364:CDS |
GCAGCTCATACCAGTTCTTC+TGG | 0.317367 | 2.2:-2454268 | MS.gene36364:intron |
AAAGCAAGCATTAAACATTC+TGG | 0.318254 | 2.2:+2460090 | None:intergenic |
TTGAAAGCATTATTTCATAT+TGG | 0.321286 | 2.2:-2456562 | MS.gene36364:CDS |
AACATTGATGGCTTGCAAAA+TGG | 0.325223 | 2.2:-2457721 | MS.gene36364:CDS |
ATTCGCTTCTACACCCGTTT+TGG | 0.336943 | 2.2:-2458385 | MS.gene36364:CDS |
GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 2.2:+2455278 | None:intergenic |
TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 2.2:-2462287 | MS.gene36364:intron |
TGCCGATTCAATTGCCTCAT+TGG | 0.354326 | 2.2:-2461105 | MS.gene36364:intron |
CATACAAGATATCTTTATCT+TGG | 0.362497 | 2.2:+2454217 | None:intergenic |
AAAAGTACCCCTTCATCCTT+AGG | 0.362568 | 2.2:+2455404 | None:intergenic |
GTTGCAAGCTTGGATGCAAT+TGG | 0.372632 | 2.2:-2463088 | MS.gene36364:CDS |
ACTTCCGTGCCTTTAGTTGA+AGG | 0.385121 | 2.2:-2454933 | MS.gene36364:CDS |
ATGGGCAGGATCCTTGAAAA+TGG | 0.386884 | 2.2:-2455824 | MS.gene36364:intron |
ATCTTTATCTTGGATATCTT+CGG | 0.387694 | 2.2:+2454227 | None:intergenic |
AAAAGATTGAGTAATGGATT+TGG | 0.388568 | 2.2:+2461585 | None:intergenic |
ACTTTGAAACACAGCATTGC+AGG | 0.391348 | 2.2:+2457786 | None:intergenic |
GATTCTCTCTGCTCCATACT+TGG | 0.393299 | 2.2:+2458140 | None:intergenic |
ATGCCATTTGTGGGCTCTCA+TGG | 0.397432 | 2.2:-2455046 | MS.gene36364:CDS |
AGAGTGTGCTCCTCCAAGTA+TGG | 0.397798 | 2.2:-2458153 | MS.gene36364:CDS |
GGAAGATTGACATTAACTTC+TGG | 0.399199 | 2.2:-2455443 | MS.gene36364:CDS |
AGGTTTGCTGTTGCGTGGTC+AGG | 0.400830 | 2.2:-2455015 | MS.gene36364:CDS |
GTAGTTCTATACAGAGATAA+AGG | 0.401655 | 2.2:+2457662 | None:intergenic |
TCTAATAATATGTTACAGAT+AGG | 0.403816 | 2.2:-2455149 | MS.gene36364:CDS |
GAGAGAATCGCAAAATATAC+AGG | 0.406839 | 2.2:-2458126 | MS.gene36364:CDS |
CTTCAAACCAATGCCATTTG+TGG | 0.407593 | 2.2:-2455056 | MS.gene36364:CDS |
AGGTGCGCTCGTTGGTTGCT+TGG | 0.408972 | 2.2:-2461641 | MS.gene36364:CDS |
TAATTCTCCATTTGAGGAAA+AGG | 0.410569 | 2.2:-2455732 | MS.gene36364:intron |
GAAGTACTGACCATGCTTGC+CGG | 0.413682 | 2.2:+2452926 | None:intergenic |
TTAAGAATGATGGATAAATT+GGG | 0.416904 | 2.2:-2457757 | MS.gene36364:CDS |
GTTCTTACTGATTTATGTCT+CGG | 0.417407 | 2.2:-2455098 | MS.gene36364:CDS |
AGCTGAGGAACTATGAAGTA+TGG | 0.418824 | 2.2:+2457582 | None:intergenic |
ACTCTCAGGATGCAGGGAAT+TGG | 0.421940 | 2.2:-2457641 | MS.gene36364:CDS |
TCAAGTGAGCCTTCAACTAA+AGG | 0.422165 | 2.2:+2454924 | None:intergenic |
AATCCATGCAATTTCCTGCT+TGG | 0.428610 | 2.2:+2455756 | None:intergenic |
AAGAAGAAAGTTTCTGAAGA+AGG | 0.429146 | 2.2:+2458343 | None:intergenic |
ACACACATTCCAAATATAAG+AGG | 0.429195 | 2.2:-2455344 | MS.gene36364:CDS |
GTAGAAGCATTATATGATAT+CGG | 0.429218 | 2.2:-2456421 | MS.gene36364:CDS |
AAGAAGAAACTACATGCTAT+TGG | 0.431368 | 2.2:-2457847 | MS.gene36364:CDS |
GCACAATAAGCTGCTGAAGC+AGG | 0.431485 | 2.2:+2457977 | None:intergenic |
AAGTCTGATACCGTCTTATG+AGG | 0.431679 | 2.2:+2453663 | None:intergenic |
GACAAGCAATCCAGAAGAAC+TGG | 0.432210 | 2.2:+2454258 | None:intergenic |
TTGGTTGCTTGGCACTGATA+AGG | 0.433268 | 2.2:-2461630 | MS.gene36364:CDS |
TAGCTTGGTTGGGTTCTTCA+AGG | 0.437441 | 2.2:-2462212 | MS.gene36364:CDS |
TGTATTGCAGGTTGCAAGCT+TGG | 0.439105 | 2.2:-2463098 | MS.gene36364:intron |
GATCTGATTCTTTATTGTCC+AGG | 0.441249 | 2.2:-2454722 | MS.gene36364:intron |
TGGCATTCCATAGTACTGTT+TGG | 0.446947 | 2.2:+2456587 | None:intergenic |
TTCAAACCAATGCCATTTGT+GGG | 0.447068 | 2.2:-2455055 | MS.gene36364:CDS |
ATCAGACTTCTCTGCACCAT+TGG | 0.447336 | 2.2:+2455229 | None:intergenic |
AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 2.2:-2462281 | MS.gene36364:CDS |
AAAACTATACATAGCTTGGT+TGG | 0.451872 | 2.2:-2462223 | MS.gene36364:CDS |
ATGACAAATGGCTCCAAAAC+GGG | 0.457120 | 2.2:+2458372 | None:intergenic |
GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 2.2:-2455288 | MS.gene36364:CDS |
CACAGCATTGCAGGAAGGAA+TGG | 0.459401 | 2.2:+2457795 | None:intergenic |
AATCTTTAGGACTGCATGAC+AGG | 0.461991 | 2.2:-2461543 | MS.gene36364:CDS |
AAAGTACCCCTTCATCCTTA+GGG | 0.462262 | 2.2:+2455405 | None:intergenic |
TAGGTAATGGATCAAGTAAT+GGG | 0.464527 | 2.2:-2455130 | MS.gene36364:CDS |
CAAGATAAAGATATCTTGTA+TGG | 0.465086 | 2.2:-2454216 | MS.gene36364:CDS |
TGAGATCAATTGCAGAAAGA+TGG | 0.467104 | 2.2:+2454746 | None:intergenic |
GCTAGAGTAAAAGAGAAATC+TGG | 0.469250 | 2.2:+2458054 | None:intergenic |
CGATTATATCCTGATCCATC+TGG | 0.470202 | 2.2:-2460045 | MS.gene36364:CDS |
TAGAACTACTCTCAGGATGC+AGG | 0.472025 | 2.2:-2457648 | MS.gene36364:CDS |
GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 2.2:-2455035 | MS.gene36364:CDS |
TGGGAGTGAACCTGGTGAGA+TGG | 0.474738 | 2.2:+2463180 | None:intergenic |
AAGTTTCAGCTTAATGATGT+AGG | 0.474859 | 2.2:-2455464 | MS.gene36364:CDS |
TTGCAAGCTTGGATGCAATT+GGG | 0.475056 | 2.2:-2463087 | MS.gene36364:CDS |
CTTACATGTGTAAAGTGAAT+CGG | 0.477840 | 2.2:+2459970 | None:intergenic |
ATTTGTGGGCTCTCATGGAT+TGG | 0.477974 | 2.2:-2455041 | MS.gene36364:CDS |
TTATTTATAATCAGGCAGAT+TGG | 0.478009 | 2.2:-2461675 | MS.gene36364:intron |
GCACACTCTAAGATATTGTA+AGG | 0.481622 | 2.2:+2458167 | None:intergenic |
AAACTATACATAGCTTGGTT+GGG | 0.482444 | 2.2:-2462222 | MS.gene36364:CDS |
GTAAAGTGAATCGGAAAGTA+AGG | 0.484365 | 2.2:+2459979 | None:intergenic |
AATGCACATATTATCATCAA+TGG | 0.492111 | 2.2:-2453708 | MS.gene36364:CDS |
TGGGTTCTTCAAGGAAAGAA+TGG | 0.495618 | 2.2:-2462203 | MS.gene36364:intron |
AAAATTCAGCGAGTCTGAAA+AGG | 0.497418 | 2.2:-2456527 | MS.gene36364:CDS |
GACATTTCCCCTAAGGATGA+AGG | 0.497426 | 2.2:-2455413 | MS.gene36364:CDS |
CTCATAAGATGCAATGCTGT+TGG | 0.497867 | 2.2:+2457897 | None:intergenic |
AATATGTTACAGATAGGTAA+TGG | 0.501229 | 2.2:-2455143 | MS.gene36364:CDS |
TACCAATGAGGCAATTGAAT+CGG | 0.502183 | 2.2:+2461103 | None:intergenic |
TCACCTCCAATGTATATGTC+AGG | 0.502188 | 2.2:+2457499 | None:intergenic |
TGAAATTTAGGTTAGAGAGT+TGG | 0.502230 | 2.2:-2462904 | MS.gene36364:intron |
CACAATAAGCTGCTGAAGCA+GGG | 0.507341 | 2.2:+2457978 | None:intergenic |
AATGACAAATGGCTCCAAAA+CGG | 0.509408 | 2.2:+2458371 | None:intergenic |
AGAGCAGAAATGTGATCCTC+TGG | 0.513326 | 2.2:-2454892 | MS.gene36364:CDS |
GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 2.2:+2457804 | None:intergenic |
TGGAAAGTTAATACCATCTG+TGG | 0.516141 | 2.2:+2458029 | None:intergenic |
GCAAGTAGACCAGATGGATC+AGG | 0.516624 | 2.2:+2460036 | None:intergenic |
TTGCAGAAAGATGGGCATCA+TGG | 0.520421 | 2.2:+2454755 | None:intergenic |
CTGTCAAATGCCGGCAAGCA+TGG | 0.520628 | 2.2:-2452936 | MS.gene36364:intron |
CTCTTCAACTCCATCTCACC+AGG | 0.521795 | 2.2:-2463190 | MS.gene36364:intron |
GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 2.2:+2458348 | None:intergenic |
GCAGTACGAGGTGCGCTCGT+TGG | 0.524945 | 2.2:-2461649 | MS.gene36364:CDS |
TGAGAGCCCACAAATGGCAT+TGG | 0.529030 | 2.2:+2455049 | None:intergenic |
TACATCATTAAGCTGAAACT+TGG | 0.529117 | 2.2:+2455466 | None:intergenic |
AGAAGGAGAGGAATGACAAA+TGG | 0.529592 | 2.2:+2458360 | None:intergenic |
GAAGTCTGATGAACTTACCT+TGG | 0.531629 | 2.2:-2455216 | MS.gene36364:CDS |
AATCCATGAGAGCCCACAAA+TGG | 0.532104 | 2.2:+2455043 | None:intergenic |
GCTTACAATTCTTCAAGCGA+TGG | 0.534202 | 2.2:-2456377 | MS.gene36364:CDS |
TTATATGATATCGGCATGAC+CGG | 0.534310 | 2.2:-2456412 | MS.gene36364:CDS |
GAGATCAATTGCAGAAAGAT+GGG | 0.536252 | 2.2:+2454747 | None:intergenic |
TTTAATAATAACCCTCCTCA+AGG | 0.537659 | 2.2:-2455309 | MS.gene36364:CDS |
GGGCATCGATTGCCTCATCT+AGG | 0.541580 | 2.2:-2452815 | MS.gene36364:CDS |
ATAGGTAATGGATCAAGTAA+TGG | 0.542296 | 2.2:-2455131 | MS.gene36364:CDS |
AAAATATGACATTTCCCCTA+AGG | 0.543815 | 2.2:-2455420 | MS.gene36364:CDS |
ACATTTCCCCTAAGGATGAA+GGG | 0.544414 | 2.2:-2455412 | MS.gene36364:CDS |
CTCTGTATAGAACTACTCTC+AGG | 0.544666 | 2.2:-2457655 | MS.gene36364:CDS |
GAACCAAGCAGGAAATTGCA+TGG | 0.546490 | 2.2:-2455759 | MS.gene36364:CDS |
TCTCTCTGCTCCATACTTGG+AGG | 0.547967 | 2.2:+2458143 | None:intergenic |
GTACCATCAGAGTCCTTGAT+AGG | 0.548690 | 2.2:+2459601 | None:intergenic |
ACTGATAAGGAGGAAAATAA+CGG | 0.549889 | 2.2:-2461617 | MS.gene36364:CDS |
GTGGATATTTGGAACCAAGC+AGG | 0.552500 | 2.2:-2455770 | MS.gene36364:CDS |
GCAATGAAGCTGTCAAATGC+CGG | 0.553254 | 2.2:-2452945 | MS.gene36364:CDS |
TGGAGGTGCAGAGGATTTCG+TGG | 0.554978 | 2.2:-2455804 | MS.gene36364:CDS |
ATTCTTGCAAGCTACTTCCA+TGG | 0.557389 | 2.2:-2456037 | MS.gene36364:intron |
ATGTATATGTCAGGATCAGA+AGG | 0.557763 | 2.2:+2457508 | None:intergenic |
TGCAACGAGATGACCTATCA+AGG | 0.557982 | 2.2:-2459614 | MS.gene36364:CDS |
GATACAGTTATTCGATCAAG+AGG | 0.561676 | 2.2:-2462861 | MS.gene36364:intron |
AATCGGCATGATGTTCTAGC+AGG | 0.561685 | 2.2:+2461120 | None:intergenic |
TCTGATCCTGACATATACAT+TGG | 0.561878 | 2.2:-2457505 | MS.gene36364:CDS |
TTCTTCACTACATTCAGCAA+AGG | 0.562396 | 2.2:-2458325 | MS.gene36364:intron |
GAAAATTTCATGCCACAGTA+CGG | 0.562746 | 2.2:-2454806 | MS.gene36364:CDS |
TTGTAGAAAAGATTGAGTAA+TGG | 0.565621 | 2.2:+2461579 | None:intergenic |
GATCCTGACATATACATTGG+AGG | 0.568758 | 2.2:-2457502 | MS.gene36364:intron |
CTGATAAGGAGGAAAATAAC+GGG | 0.569750 | 2.2:-2461616 | MS.gene36364:CDS |
TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 2.2:+2463051 | None:intergenic |
AAAGCGATGAAAGTTTCTGT+TGG | 0.571764 | 2.2:-2455554 | MS.gene36364:CDS |
ACAATTCTTCAAGCGATGGA+AGG | 0.572459 | 2.2:-2456373 | MS.gene36364:CDS |
CTGGTGAGATGGAGTTGAAG+AGG | 0.576523 | 2.2:+2463191 | None:intergenic |
CAGTAAAACTATACATAGCT+TGG | 0.576918 | 2.2:-2462227 | MS.gene36364:CDS |
TTCTTTACCAGCAAACCAGT+GGG | 0.580902 | 2.2:-2459647 | MS.gene36364:intron |
CAATGGTCTAACTAAGCTTG+TGG | 0.585599 | 2.2:-2453691 | MS.gene36364:CDS |
GTGGCACATTTCCTTGCCAG+AGG | 0.587914 | 2.2:+2454876 | None:intergenic |
AAGCGATGAAAGTTTCTGTT+GGG | 0.589357 | 2.2:-2455553 | MS.gene36364:CDS |
TAGCTTGATAATTGATGATG+AGG | 0.592254 | 2.2:-2457935 | MS.gene36364:CDS |
GGAATTGGTTATTCTGTCTG+AGG | 0.592338 | 2.2:-2457626 | MS.gene36364:CDS |
AAGCTTGCAAGTAGACCAGA+TGG | 0.592834 | 2.2:+2460030 | None:intergenic |
AATATCAAGAGCTTCTTCCA+AGG | 0.593516 | 2.2:+2455199 | None:intergenic |
GTTGCTTGGCACTGATAAGG+AGG | 0.593536 | 2.2:-2461627 | MS.gene36364:CDS |
TTTAGGACTGCATGACAGGA+AGG | 0.596853 | 2.2:-2461539 | MS.gene36364:intron |
TATCTATCCGTTGAGAACAC+AGG | 0.597641 | 2.2:-2453204 | MS.gene36364:intron |
CACACATTCCAAATATAAGA+GGG | 0.598820 | 2.2:-2455343 | MS.gene36364:CDS |
TTAATAATAACCCTCCTCAA+GGG | 0.599027 | 2.2:-2455308 | MS.gene36364:CDS |
TTTCGTGGTGCAATTTGCTG+TGG | 0.599331 | 2.2:-2455789 | MS.gene36364:CDS |
TTTCTTTACCAGCAAACCAG+TGG | 0.603166 | 2.2:-2459648 | MS.gene36364:intron |
TCATTCAGTATAACAATCAG+TGG | 0.604482 | 2.2:+2454402 | None:intergenic |
TATATTTACCAATTTATCCG+AGG | 0.604801 | 2.2:-2456347 | MS.gene36364:intron |
TTTACTCTAGCACCCACAGA+TGG | 0.604886 | 2.2:-2458042 | MS.gene36364:CDS |
ACACTTTATATACTTATTTG+GGG | 0.607680 | 2.2:-2458080 | MS.gene36364:CDS |
AGAACTACTCTCAGGATGCA+GGG | 0.611678 | 2.2:-2457647 | MS.gene36364:CDS |
GGAAAAGGTTTGCTGTTGCG+TGG | 0.612022 | 2.2:-2455020 | MS.gene36364:CDS |
CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 2.2:+2455297 | None:intergenic |
TACAGCTAAGACTGAACCAA+AGG | 0.615923 | 2.2:+2457546 | None:intergenic |
AGAAATGTGATCCTCTGGCA+AGG | 0.616514 | 2.2:-2454887 | MS.gene36364:CDS |
CCTTGAAAATGGAGGTGCAG+AGG | 0.618663 | 2.2:-2455813 | MS.gene36364:CDS |
AGTCTGATACCGTCTTATGA+GGG | 0.618808 | 2.2:+2453664 | None:intergenic |
TGACCTATCAAGGACTCTGA+TGG | 0.620654 | 2.2:-2459604 | MS.gene36364:intron |
GGAAAGTTAATACCATCTGT+GGG | 0.621048 | 2.2:+2458030 | None:intergenic |
AAACTCACTTCGAAATCCAA+TGG | 0.626907 | 2.2:-2455245 | MS.gene36364:CDS |
AGAGAATCGCAAAATATACA+GGG | 0.627207 | 2.2:-2458125 | MS.gene36364:CDS |
CATTTCCCCTAAGGATGAAG+GGG | 0.630449 | 2.2:-2455411 | MS.gene36364:CDS |
CACTTTATATACTTATTTGG+GGG | 0.631526 | 2.2:-2458079 | MS.gene36364:CDS |
TGACAAACCTGTGTTCTCAA+CGG | 0.634669 | 2.2:+2453197 | None:intergenic |
AAGTACCCCTTCATCCTTAG+GGG | 0.634965 | 2.2:+2455406 | None:intergenic |
GTCAGACATGACATGTGCAA+AGG | 0.638569 | 2.2:+2454428 | None:intergenic |
TGAGCCTTCAACTAAAGGCA+CGG | 0.639359 | 2.2:+2454929 | None:intergenic |
TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 2.2:+2455298 | None:intergenic |
GGCATTAAATAAGACAGCTG+AGG | 0.645320 | 2.2:+2457567 | None:intergenic |
TTGCACATGAGTATCCCCAC+TGG | 0.650398 | 2.2:+2459632 | None:intergenic |
CTTATATAGAGGCCGTACTG+TGG | 0.653810 | 2.2:+2454794 | None:intergenic |
AAGAACATGAAAAGCTTCCG+TGG | 0.653843 | 2.2:+2454857 | None:intergenic |
TGAAACACAGCATTGCAGGA+AGG | 0.653866 | 2.2:+2457790 | None:intergenic |
ATGAAATAATGCTTTCAATG+TGG | 0.654390 | 2.2:+2456567 | None:intergenic |
AACGGATAGATACGCACATG+AGG | 0.657874 | 2.2:+2453215 | None:intergenic |
TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 2.2:-2454788 | MS.gene36364:CDS |
GGCAGGATCCTTGAAAATGG+AGG | 0.660852 | 2.2:-2455821 | MS.gene36364:intron |
TCTGGCAAGGAAATGTGCCA+CGG | 0.665729 | 2.2:-2454874 | MS.gene36364:CDS |
TGTGGACTACCCTCATAAGA+CGG | 0.673290 | 2.2:-2453673 | MS.gene36364:intron |
ATTGATGGCTTGCAAAATGG+CGG | 0.675116 | 2.2:-2457718 | MS.gene36364:CDS |
TGTATATGTCAGGATCAGAA+GGG | 0.676870 | 2.2:+2457509 | None:intergenic |
CAACTGGAACAACACCCTTG+AGG | 0.676901 | 2.2:+2455294 | None:intergenic |
GAAACGAAGACTCCTAGATG+AGG | 0.685715 | 2.2:+2452803 | None:intergenic |
AATGTGACGAGTCAATTGAG+TGG | 0.686701 | 2.2:+2463230 | None:intergenic |
GGAAGTAAGGACTACCAATG+AGG | 0.689143 | 2.2:+2461091 | None:intergenic |
GAGAATCGCAAAATATACAG+GGG | 0.705417 | 2.2:-2458124 | MS.gene36364:CDS |
GCAGATTGGAAAGCAGTACG+AGG | 0.712571 | 2.2:-2461661 | MS.gene36364:CDS |
TCTTTACCAGCAAACCAGTG+GGG | 0.721811 | 2.2:-2459646 | MS.gene36364:intron |
AGTTGAAGAGGAGTCAACGT+AGG | 0.742240 | 2.2:+2463203 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 2452800 | 2463262 | 2452800 | ID=MS.gene36364 |
chr2.2 | mRNA | 2452800 | 2463262 | 2452800 | ID=MS.gene36364.t1;Parent=MS.gene36364 |
chr2.2 | exon | 2463191 | 2463262 | 2463191 | ID=MS.gene36364.t1.exon1;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2463191 | 2463262 | 2463191 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2463048 | 2463110 | 2463048 | ID=MS.gene36364.t1.exon2;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2463048 | 2463110 | 2463048 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2462862 | 2462916 | 2462862 | ID=MS.gene36364.t1.exon3;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2462862 | 2462916 | 2462862 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2462204 | 2462301 | 2462204 | ID=MS.gene36364.t1.exon4;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2462204 | 2462301 | 2462204 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2461540 | 2461683 | 2461540 | ID=MS.gene36364.t1.exon5;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2461540 | 2461683 | 2461540 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2461106 | 2461165 | 2461106 | ID=MS.gene36364.t1.exon6;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2461106 | 2461165 | 2461106 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2459975 | 2460163 | 2459975 | ID=MS.gene36364.t1.exon7;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2459975 | 2460163 | 2459975 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2459605 | 2459658 | 2459605 | ID=MS.gene36364.t1.exon8;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2459605 | 2459658 | 2459605 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2458326 | 2458412 | 2458326 | ID=MS.gene36364.t1.exon9;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2458326 | 2458412 | 2458326 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2457503 | 2458196 | 2457503 | ID=MS.gene36364.t1.exon10;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2457503 | 2458196 | 2457503 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2456348 | 2456721 | 2456348 | ID=MS.gene36364.t1.exon11;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2456348 | 2456721 | 2456348 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2456038 | 2456111 | 2456038 | ID=MS.gene36364.t1.exon12;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2456038 | 2456111 | 2456038 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2455733 | 2455838 | 2455733 | ID=MS.gene36364.t1.exon13;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2455733 | 2455838 | 2455733 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2454723 | 2455597 | 2454723 | ID=MS.gene36364.t1.exon14;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2454723 | 2455597 | 2454723 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2454392 | 2454467 | 2454392 | ID=MS.gene36364.t1.exon15;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2454392 | 2454467 | 2454392 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2454175 | 2454286 | 2454175 | ID=MS.gene36364.t1.exon16;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2454175 | 2454286 | 2454175 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2453674 | 2453750 | 2453674 | ID=MS.gene36364.t1.exon17;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2453674 | 2453750 | 2453674 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2453205 | 2453285 | 2453205 | ID=MS.gene36364.t1.exon18;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2453205 | 2453285 | 2453205 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2452937 | 2453016 | 2452937 | ID=MS.gene36364.t1.exon19;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2452937 | 2453016 | 2452937 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
chr2.2 | exon | 2452800 | 2452836 | 2452800 | ID=MS.gene36364.t1.exon20;Parent=MS.gene36364.t1 |
chr2.2 | CDS | 2452800 | 2452836 | 2452800 | ID=cds.MS.gene36364.t1;Parent=MS.gene36364.t1 |
Gene Sequence |
Protein sequence |