Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36484.t1 | XP_003608492.1 | 93 | 471 | 32 | 1 | 1 | 471 | 1 | 470 | 1.80E-242 | 848.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36484.t1 | P52410 | 87.0 | 409 | 53 | 0 | 63 | 471 | 65 | 473 | 1.0e-209 | 730.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36484.t1 | G7JDY8 | 93.0 | 471 | 32 | 1 | 1 | 471 | 1 | 470 | 1.3e-242 | 848.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46486 | MS.gene36484 | PPI |
| MS.gene94820 | MS.gene36484 | PPI |
| MS.gene36484 | MS.gene34495 | PPI |
| MS.gene89534 | MS.gene36484 | PPI |
| MS.gene034624 | MS.gene36484 | PPI |
| MS.gene49091 | MS.gene36484 | PPI |
| MS.gene038042 | MS.gene36484 | PPI |
| MS.gene006293 | MS.gene36484 | PPI |
| MS.gene24009 | MS.gene36484 | PPI |
| MS.gene36484 | MS.gene39202 | PPI |
| MS.gene36484 | MS.gene41434 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36484.t1 | MTR_4g096690 | 98.726 | 471 | 5 | 1 | 1 | 471 | 1 | 470 | 0.0 | 955 |
| MS.gene36484.t1 | MTR_1g103020 | 90.295 | 474 | 41 | 4 | 1 | 471 | 1 | 472 | 0.0 | 867 |
| MS.gene36484.t1 | MTR_8g099695 | 71.591 | 440 | 124 | 1 | 32 | 471 | 44 | 482 | 0.0 | 663 |
| MS.gene36484.t1 | MTR_8g099715 | 61.412 | 425 | 113 | 3 | 47 | 471 | 21 | 394 | 0.0 | 529 |
| MS.gene36484.t1 | MTR_2g043530 | 59.398 | 399 | 160 | 2 | 73 | 470 | 91 | 488 | 1.02e-173 | 497 |
| MS.gene36484.t1 | MTR_4g124880 | 59.250 | 400 | 159 | 4 | 73 | 470 | 94 | 491 | 2.53e-170 | 488 |
| MS.gene36484.t1 | MTR_2g043530 | 60.665 | 361 | 141 | 1 | 73 | 433 | 91 | 450 | 1.06e-160 | 462 |
| MS.gene36484.t1 | MTR_4g124880 | 60.519 | 347 | 133 | 4 | 126 | 470 | 1 | 345 | 1.89e-149 | 430 |
| MS.gene36484.t1 | MTR_8g099700 | 67.063 | 252 | 57 | 1 | 47 | 298 | 64 | 289 | 4.16e-117 | 345 |
| MS.gene36484.t1 | MTR_1g069385 | 39.631 | 434 | 235 | 7 | 59 | 467 | 37 | 468 | 1.90e-87 | 276 |
| MS.gene36484.t1 | MTR_1g069385 | 43.149 | 343 | 188 | 4 | 130 | 467 | 5 | 345 | 2.63e-81 | 256 |
| MS.gene36484.t1 | MTR_8g099705 | 74.590 | 122 | 31 | 0 | 328 | 449 | 1 | 122 | 1.34e-55 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36484.t1 | AT5G46290 | 80.882 | 476 | 83 | 3 | 1 | 471 | 1 | 473 | 0.0 | 786 |
| MS.gene36484.t1 | AT5G46290 | 78.252 | 492 | 83 | 4 | 1 | 471 | 1 | 489 | 0.0 | 776 |
| MS.gene36484.t1 | AT5G46290 | 69.748 | 476 | 81 | 5 | 1 | 471 | 1 | 418 | 0.0 | 647 |
| MS.gene36484.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene36484.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene36484.t1 | AT1G74960 | 54.965 | 433 | 193 | 2 | 39 | 470 | 110 | 541 | 1.17e-167 | 483 |
| MS.gene36484.t1 | AT2G04540 | 40.230 | 435 | 230 | 12 | 59 | 468 | 31 | 460 | 7.55e-82 | 261 |
Find 138 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTATGCTATTACAAATA+TGG | 0.182977 | 4.1:-18368312 | MS.gene36484:CDS |
| TTGGGATTGATTTAGGTTTC+AGG | 0.183362 | 4.1:-18368277 | MS.gene36484:CDS |
| GCCATTATTCCTATTGGTTT+GGG | 0.188973 | 4.1:-18368137 | MS.gene36484:CDS |
| GGGCACTGCCTTGGCGCAGC+TGG | 0.190007 | 4.1:-18366125 | MS.gene36484:CDS |
| GCTTTACTTGGGATTGATTT+AGG | 0.219677 | 4.1:-18368284 | MS.gene36484:CDS |
| GCAGTTGAAATAGAATAATT+TGG | 0.222982 | 4.1:+18368251 | None:intergenic |
| CCAGGCATTTCAAATTCTTT+TGG | 0.230083 | 4.1:-18365212 | MS.gene36484:intron |
| GGAGAGTCTCTTTGGGGTTT+TGG | 0.230728 | 4.1:+18368887 | None:intergenic |
| TGCCATTATTCCTATTGGTT+TGG | 0.267531 | 4.1:-18368138 | MS.gene36484:CDS |
| GAGACGACGGAGAGTCTCTT+TGG | 0.301000 | 4.1:+18368879 | None:intergenic |
| TGCGAACCGAGTAGGGAATT+TGG | 0.306727 | 4.1:+18368689 | None:intergenic |
| ATGACCCTAAAACTGCTTCT+AGG | 0.311296 | 4.1:-18368076 | MS.gene36484:CDS |
| TCAAAATCAACTGCAGGTTC+TGG | 0.321272 | 4.1:+18365374 | None:intergenic |
| AGAGATTAATGCTATCAAAA+AGG | 0.331270 | 4.1:-18366320 | MS.gene36484:CDS |
| TTGGGATCCTTCTCTCTTTG+AGG | 0.337127 | 4.1:+18368834 | None:intergenic |
| GTGGGATCACATTGATTGAT+AGG | 0.337601 | 4.1:-18368722 | MS.gene36484:CDS |
| AGTGATCACAACACGCTTCT+TGG | 0.350950 | 4.1:+18368815 | None:intergenic |
| CTGTGATACCAGTCTATGAT+AGG | 0.352309 | 4.1:-18366146 | MS.gene36484:intron |
| AATATGGCTTCAGCTTTACT+TGG | 0.353169 | 4.1:-18368296 | MS.gene36484:CDS |
| GAAGCTGCCATTATTCCTAT+TGG | 0.362133 | 4.1:-18368143 | MS.gene36484:CDS |
| TGGGATTGATTTAGGTTTCA+GGG | 0.362251 | 4.1:-18368276 | MS.gene36484:CDS |
| ATCTTCAAGTGCTTTCTTCC+CGG | 0.364383 | 4.1:+18368578 | None:intergenic |
| TTTGGCGGTGGTGGTGGCGG+CGG | 0.369732 | 4.1:+18368905 | None:intergenic |
| GGGTGAAGGTGCTGGAGTTT+TGG | 0.370027 | 4.1:-18368021 | MS.gene36484:intron |
| TTTGTTATGGGTGAAGGTGC+TGG | 0.375390 | 4.1:-18368029 | MS.gene36484:CDS |
| ACCTATCATTGCTGAATACT+TGG | 0.377637 | 4.1:-18367628 | MS.gene36484:CDS |
| CCCCAAACCAATAGGAATAA+TGG | 0.379340 | 4.1:+18368136 | None:intergenic |
| AGACGACGGAGAGTCTCTTT+GGG | 0.379518 | 4.1:+18368880 | None:intergenic |
| CTCGCTTCATGGCATGTTCA+AGG | 0.383805 | 4.1:+18367655 | None:intergenic |
| GGCACTGCCTTGGCGCAGCT+GGG | 0.383994 | 4.1:-18366124 | MS.gene36484:CDS |
| GGTGGTGGTGGCGGCGGCAT+TGG | 0.384156 | 4.1:+18368911 | None:intergenic |
| CGTACGAATTGATTGATTGA+TGG | 0.387158 | 4.1:+18366050 | None:intergenic |
| TTCCACTCTTGTTGGTGACT+TGG | 0.387671 | 4.1:-18366344 | MS.gene36484:CDS |
| GATAGGTGCACCTCGCTTCA+TGG | 0.393092 | 4.1:+18367644 | None:intergenic |
| ATGCAGCCACCCTGTTGTTA+TGG | 0.398709 | 4.1:+18366073 | None:intergenic |
| TAAAGAACGTGCTGGTGTTT+TGG | 0.402018 | 4.1:-18368426 | MS.gene36484:CDS |
| ACAATAAAAGCCATAACAAC+AGG | 0.409441 | 4.1:-18366083 | MS.gene36484:CDS |
| GTCAGGAATGGGTGGTTTAA+CGG | 0.413571 | 4.1:-18368399 | MS.gene36484:CDS |
| CTAAAACTGCTTCTAGGCCT+TGG | 0.415317 | 4.1:-18368070 | MS.gene36484:CDS |
| GTGATCACAACACGCTTCTT+GGG | 0.422999 | 4.1:+18368816 | None:intergenic |
| CACTGCCTTGGCGCAGCTGG+GGG | 0.431565 | 4.1:-18366122 | MS.gene36484:CDS |
| CGGAGTGGTTCGAGTGGTGA+AGG | 0.433580 | 4.1:+18368945 | None:intergenic |
| CTCTCTTTGAGGAGCGGCAG+TGG | 0.435852 | 4.1:+18368845 | None:intergenic |
| GGTGGTGGCGGCGGCATTGG+AGG | 0.443199 | 4.1:+18368914 | None:intergenic |
| GCCATATTTGTAATAGCATA+AGG | 0.446803 | 4.1:+18368311 | None:intergenic |
| GTTAAGAATCTGATTGAAAA+GGG | 0.449404 | 4.1:-18368362 | MS.gene36484:CDS |
| CATGCAACTTCCACTCTTGT+TGG | 0.451361 | 4.1:-18366352 | MS.gene36484:CDS |
| GCACTGCCTTGGCGCAGCTG+GGG | 0.451754 | 4.1:-18366123 | MS.gene36484:CDS |
| ACGCCAAGCCCATCAGATCT+TGG | 0.452089 | 4.1:+18367567 | None:intergenic |
| AGTTAAGAATCTGATTGAAA+AGG | 0.455234 | 4.1:-18368363 | MS.gene36484:CDS |
| CTCCGGTACTGCAATGTCGC+CGG | 0.463407 | 4.1:-18368597 | MS.gene36484:CDS |
| TCCCGGCGACATTGCAGTAC+CGG | 0.468002 | 4.1:+18368595 | None:intergenic |
| TAAAACTGCTTCTAGGCCTT+GGG | 0.469150 | 4.1:-18368069 | MS.gene36484:CDS |
| CCCACCCGCAATCATCAAAT+CGG | 0.469221 | 4.1:+18368169 | None:intergenic |
| GGTGAAGGGCGGAGAGTGAA+GGG | 0.471647 | 4.1:+18368960 | None:intergenic |
| TTGGTTGGGTCAGGAATGGG+TGG | 0.473581 | 4.1:-18368407 | MS.gene36484:CDS |
| CCATTATTCCTATTGGTTTG+GGG | 0.476862 | 4.1:-18368136 | MS.gene36484:CDS |
| CTGCTGCCAATCACATTCGT+AGG | 0.477416 | 4.1:-18368199 | MS.gene36484:CDS |
| ATGACTGATCCAAGATCTGA+TGG | 0.479018 | 4.1:-18367576 | MS.gene36484:CDS |
| CATTATTCCTATTGGTTTGG+GGG | 0.482868 | 4.1:-18368135 | MS.gene36484:CDS |
| GAGGCCGATTTGATGATTGC+GGG | 0.483517 | 4.1:-18368173 | MS.gene36484:CDS |
| CCCAAGTATTCAGCAATGAT+AGG | 0.484502 | 4.1:+18367627 | None:intergenic |
| AAATTCCCTACTCGGTTCGC+AGG | 0.490002 | 4.1:-18368687 | MS.gene36484:CDS |
| CTCACCCCTACGAATGTGAT+TGG | 0.491901 | 4.1:+18368193 | None:intergenic |
| GATCCAAGATCTGATGGGCT+TGG | 0.498358 | 4.1:-18367570 | MS.gene36484:CDS |
| TGCTGCCAATCACATTCGTA+GGG | 0.501866 | 4.1:-18368198 | MS.gene36484:CDS |
| TCTGACCTGCGAACCGAGTA+GGG | 0.504912 | 4.1:+18368682 | None:intergenic |
| GCACTTGAAGATGCTGGTCT+CGG | 0.506363 | 4.1:-18368567 | MS.gene36484:CDS |
| TCCGGTACTGCAATGTCGCC+GGG | 0.507162 | 4.1:-18368596 | MS.gene36484:CDS |
| TTGAGGAGCGGCAGTGGTGA+CGG | 0.507766 | 4.1:+18368851 | None:intergenic |
| GAGTAAGACAATACCTCCTC+GGG | 0.513068 | 4.1:+18367501 | None:intergenic |
| AAGAAGCGTGTTGTGATCAC+TGG | 0.513825 | 4.1:-18368813 | MS.gene36484:CDS |
| ATGCTTCCAAATTCCCTACT+CGG | 0.516081 | 4.1:-18368695 | MS.gene36484:CDS |
| CAGCAGCATGAAATTAATGT+TGG | 0.518157 | 4.1:-18365332 | MS.gene36484:intron |
| AGCTTCTCGCCGGTGAGAGT+GGG | 0.518796 | 4.1:-18368740 | MS.gene36484:CDS |
| TGAGGCCGATTTGATGATTG+CGG | 0.522914 | 4.1:-18368174 | MS.gene36484:CDS |
| AAGAAAGCACTTGAAGATGC+TGG | 0.527588 | 4.1:-18368573 | MS.gene36484:CDS |
| AGCTCTGAGGGTTACATCGA+CGG | 0.529142 | 4.1:-18368648 | MS.gene36484:CDS |
| CGGCGTCTACAAGACTGCTC+TGG | 0.531158 | 4.1:+18367532 | None:intergenic |
| CGGGAAGAATGACCGGAGAC+AGG | 0.533743 | 4.1:-18368628 | MS.gene36484:CDS |
| ATCCGTGGGTTTAGCTCTGA+GGG | 0.533824 | 4.1:-18368660 | MS.gene36484:CDS |
| AAGCTTCTCGCCGGTGAGAG+TGG | 0.533893 | 4.1:-18368741 | MS.gene36484:CDS |
| ATATGGCTTCAGCTTTACTT+GGG | 0.536843 | 4.1:-18368295 | MS.gene36484:CDS |
| ATTATTCCTATTGGTTTGGG+GGG | 0.537089 | 4.1:-18368134 | MS.gene36484:CDS |
| CAATGTGATCCCACTCTCAC+CGG | 0.537398 | 4.1:+18368731 | None:intergenic |
| GCTCTGAGGGTTACATCGAC+GGG | 0.540385 | 4.1:-18368647 | MS.gene36484:CDS |
| GACGACGGAGAGTCTCTTTG+GGG | 0.543879 | 4.1:+18368881 | None:intergenic |
| GATCCGTGGGTTTAGCTCTG+AGG | 0.548499 | 4.1:-18368661 | MS.gene36484:CDS |
| GGTTCGCAGGTCAGATCCGT+GGG | 0.552078 | 4.1:-18368674 | MS.gene36484:CDS |
| CGGTGCCGAAAATCTCGATA+AGG | 0.557505 | 4.1:-18368547 | MS.gene36484:intron |
| CGGTTCGCAGGTCAGATCCG+TGG | 0.558021 | 4.1:-18368675 | MS.gene36484:CDS |
| AGAGTAAGACAATACCTCCT+CGG | 0.558328 | 4.1:+18367500 | None:intergenic |
| GGGATTGATTTAGGTTTCAG+GGG | 0.561124 | 4.1:-18368275 | MS.gene36484:CDS |
| ATGGGTGGCGTCACTGTACA+TGG | 0.561821 | 4.1:-18368789 | MS.gene36484:CDS |
| TGGTGAAGGGCGGAGAGTGA+AGG | 0.562830 | 4.1:+18368959 | None:intergenic |
| GGAGACAATCATCCTGTCTC+CGG | 0.564955 | 4.1:+18368616 | None:intergenic |
| GCCGATTTGATGATTGCGGG+TGG | 0.565161 | 4.1:-18368170 | MS.gene36484:CDS |
| CAATCACATTCGTAGGGGTG+AGG | 0.569075 | 4.1:-18368192 | MS.gene36484:CDS |
| AATCAGATTCTTAACTCCGT+CGG | 0.570042 | 4.1:+18368370 | None:intergenic |
| CCTATCATTGCTGAATACTT+GGG | 0.577362 | 4.1:-18367627 | MS.gene36484:CDS |
| ACGGTATCAAAATCAACTGC+AGG | 0.580461 | 4.1:+18365368 | None:intergenic |
| ACATCGACGGGAAGAATGAC+CGG | 0.581180 | 4.1:-18368635 | MS.gene36484:CDS |
| TGCCGCTCCTCAAAGAGAGA+AGG | 0.582705 | 4.1:-18368841 | MS.gene36484:CDS |
| CGTGTTGTGATCACTGGCAT+GGG | 0.584729 | 4.1:-18368807 | MS.gene36484:CDS |
| TGCCAAGTCACCAACAAGAG+TGG | 0.586198 | 4.1:+18366342 | None:intergenic |
| TTCTACGAGAAGCTTCTCGC+CGG | 0.588660 | 4.1:-18368750 | MS.gene36484:CDS |
| TACCTCCTCGGGTGACACAC+CGG | 0.588795 | 4.1:+18367512 | None:intergenic |
| TGGTGGACACAACTCTGTCG+TGG | 0.588850 | 4.1:-18365186 | MS.gene36484:CDS |
| CTGCTGCTTGACATTTGCCA+CGG | 0.591270 | 4.1:+18365349 | None:intergenic |
| TCTATGATAGGGCACTGCCT+TGG | 0.593139 | 4.1:-18366134 | MS.gene36484:CDS |
| GTTGTGATCACTGGCATGGG+TGG | 0.596678 | 4.1:-18368804 | MS.gene36484:CDS |
| ATGACATGATAATACCTTGG+TGG | 0.597289 | 4.1:+18366264 | None:intergenic |
| GCGTGTTGTGATCACTGGCA+TGG | 0.599227 | 4.1:-18368808 | MS.gene36484:CDS |
| CCGATTTGATGATTGCGGGT+GGG | 0.602467 | 4.1:-18368169 | MS.gene36484:CDS |
| TGTGATACCAGTCTATGATA+GGG | 0.603213 | 4.1:-18366145 | MS.gene36484:intron |
| ATCCTTCTCTCTTTGAGGAG+CGG | 0.604302 | 4.1:+18368839 | None:intergenic |
| GGAGTGGTTCGAGTGGTGAA+GGG | 0.605118 | 4.1:+18368946 | None:intergenic |
| ATCTGACCTGCGAACCGAGT+AGG | 0.609425 | 4.1:+18368681 | None:intergenic |
| GGAGACAGGATGATTGTCTC+CGG | 0.614203 | 4.1:-18368614 | MS.gene36484:CDS |
| CATCAAAATTAATGCCACCA+AGG | 0.623828 | 4.1:-18366278 | MS.gene36484:intron |
| CCATCACGGTCTTTATCCCA+AGG | 0.625058 | 4.1:+18368053 | None:intergenic |
| CCTTGGGATAAAGACCGTGA+TGG | 0.627148 | 4.1:-18368053 | MS.gene36484:CDS |
| CTTGAACATGCCATGAAGCG+AGG | 0.627955 | 4.1:-18367654 | MS.gene36484:CDS |
| CGCCGGTGTGTCACCCGAGG+AGG | 0.641700 | 4.1:-18367514 | MS.gene36484:intron |
| TGGCAATCAGGGTCTGAAAG+CGG | 0.643041 | 4.1:+18365157 | None:intergenic |
| TAGATTGATAAAGAACGTGC+TGG | 0.644130 | 4.1:-18368434 | MS.gene36484:CDS |
| TGACTGATCCAAGATCTGAT+GGG | 0.646479 | 4.1:-18367575 | MS.gene36484:CDS |
| AGACGCCGGTGTGTCACCCG+AGG | 0.647368 | 4.1:-18367517 | MS.gene36484:CDS |
| AGGAGCGGCAGTGGTGACGG+CGG | 0.651078 | 4.1:+18368854 | None:intergenic |
| ATCATTGCTGAATACTTGGG+AGG | 0.652856 | 4.1:-18367624 | MS.gene36484:CDS |
| CAGAGCAGTCTTGTAGACGC+CGG | 0.652992 | 4.1:-18367531 | MS.gene36484:CDS |
| GTGGTTCGAGTGGTGAAGGG+CGG | 0.658669 | 4.1:+18368949 | None:intergenic |
| GGTGACGGCGGAAGAGACGA+CGG | 0.668181 | 4.1:+18368866 | None:intergenic |
| CACCCATAACAAAACCATCA+CGG | 0.674295 | 4.1:+18368039 | None:intergenic |
| CAATAAAAGCCATAACAACA+GGG | 0.677458 | 4.1:-18366082 | MS.gene36484:CDS |
| AACCCTCAGAGCTAAACCCA+CGG | 0.685542 | 4.1:+18368658 | None:intergenic |
| GCTGCCAATCACATTCGTAG+GGG | 0.729757 | 4.1:-18368197 | MS.gene36484:CDS |
| TAAAAGCCATAACAACAGGG+TGG | 0.762513 | 4.1:-18366079 | MS.gene36484:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTCAATTACATAAATT+AGG | - | chr4.1:18366989-18367008 | MS.gene36484:intron | 10.0% |
| !! | TTTAATAAAAGTTAAATAAC+AGG | + | chr4.1:18368358-18368377 | None:intergenic | 10.0% |
| !!! | AACTTTTATATTGTTAATTA+AGG | + | chr4.1:18366210-18366229 | None:intergenic | 10.0% |
| !!! | AATATATTTAAAACATCAAT+CGG | - | chr4.1:18367345-18367364 | MS.gene36484:intron | 10.0% |
| !!! | CTGTTTTTTTTTTTTTTTTT+GGG | - | chr4.1:18366407-18366426 | MS.gene36484:intron | 10.0% |
| !! | AAAATATTAATCAGACATTA+AGG | + | chr4.1:18367536-18367555 | None:intergenic | 15.0% |
| !! | ATAAATAAGGTTATATTGAA+CGG | + | chr4.1:18368324-18368343 | None:intergenic | 15.0% |
| !! | ATTAATTATAATTCTTACGA+AGG | + | chr4.1:18368424-18368443 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAAAAAAAC+AGG | + | chr4.1:18366409-18366428 | None:intergenic | 15.0% |
| !! | TTAAATATATTCTAATCACA+AGG | + | chr4.1:18367336-18367355 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+CGG | + | chr4.1:18367707-18367688 | None:intergenic | 15.0% |
| !!! | AATTTGCTTATAAAAAGAAA+TGG | - | chr4.1:18367688-18367707 | MS.gene36484:intron | 15.0% |
| !!! | CCTGTTTTTTTTTTTTTTTT+TGG | - | chr4.1:18366406-18366425 | MS.gene36484:intron | 15.0% |
| !!! | GATTTAGAATTATTCTTTTT+TGG | + | chr4.1:18366345-18366364 | None:intergenic | 15.0% |
| !!! | TTCAATATAACCTTATTTAT+TGG | - | chr4.1:18368324-18368343 | MS.gene36484:CDS | 15.0% |
| !! | AAAAAAATCCAAATCCAATT+AGG | + | chr4.1:18365684-18365703 | None:intergenic | 20.0% |
| !! | AAAAAATCCAAATCCAATTA+GGG | + | chr4.1:18365683-18365702 | None:intergenic | 20.0% |
| !! | AGAAAAGCAATGAATTAAAT+GGG | + | chr4.1:18366729-18366748 | None:intergenic | 20.0% |
| !! | AGAACAATAACAAATCATTA+AGG | + | chr4.1:18366172-18366191 | None:intergenic | 20.0% |
| !! | ATAAAAGTTAAATAACAGGT+TGG | + | chr4.1:18368354-18368373 | None:intergenic | 20.0% |
| !! | ATAGCATAAGGAATAAAAAA+AGG | + | chr4.1:18365827-18365846 | None:intergenic | 20.0% |
| !! | TAAAAGTTAAATAACAGGTT+GGG | + | chr4.1:18368353-18368372 | None:intergenic | 20.0% |
| !! | TATATGAACAATCATGTTAT+TGG | - | chr4.1:18368568-18368587 | MS.gene36484:CDS | 20.0% |
| !! | TTAGTAAAATCAAAAACAGT+TGG | + | chr4.1:18367216-18367235 | None:intergenic | 20.0% |
| !!! | AATTCTTGTTTTTCATGATT+AGG | - | chr4.1:18368127-18368146 | MS.gene36484:CDS | 20.0% |
| !!! | ATGATTTGTTATTGTTCTTT+TGG | - | chr4.1:18366174-18366193 | MS.gene36484:intron | 20.0% |
| !!! | ATTTCAAATTCTTTTGGATT+TGG | - | chr4.1:18368941-18368960 | MS.gene36484:CDS | 20.0% |
| ! | AAAAGTTAAATAACAGGTTG+GGG | + | chr4.1:18368352-18368371 | None:intergenic | 25.0% |
| ! | AGAAAACGTAAAAGAAGAAA+AGG | - | chr4.1:18367120-18367139 | MS.gene36484:intron | 25.0% |
| ! | AGAGATTAATGCTATCAAAA+AGG | - | chr4.1:18367827-18367846 | MS.gene36484:intron | 25.0% |
| ! | AGTTAAGAATCTGATTGAAA+AGG | - | chr4.1:18365784-18365803 | MS.gene36484:intron | 25.0% |
| ! | ATGTATGTGGTTCATAATAT+GGG | + | chr4.1:18367641-18367660 | None:intergenic | 25.0% |
| ! | ATTTAGTGGTATGATAAAAC+TGG | - | chr4.1:18367097-18367116 | MS.gene36484:intron | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | - | chr4.1:18367615-18367634 | MS.gene36484:CDS | 25.0% |
| ! | CATTCAATTAATGATGTATG+TGG | + | chr4.1:18367634-18367615 | None:intergenic | 25.0% |
| ! | CTTTCACTTTGCTAATTTAT+GGG | + | chr4.1:18367735-18367754 | None:intergenic | 25.0% |
| ! | GAGAAAAGCAATGAATTAAA+TGG | + | chr4.1:18366730-18366749 | None:intergenic | 25.0% |
| ! | GCAAACAAAATGATTACATA+TGG | + | chr4.1:18368731-18368750 | None:intergenic | 25.0% |
| ! | GCAGTTGAAATAGAATAATT+TGG | + | chr4.1:18365899-18365918 | None:intergenic | 25.0% |
| ! | GTTAAGAATCTGATTGAAAA+GGG | - | chr4.1:18365785-18365804 | MS.gene36484:intron | 25.0% |
| ! | TATAAACTGATTATTTGCAG+AGG | + | chr4.1:18367395-18367414 | None:intergenic | 25.0% |
| ! | TATATCTGAATTGAACTGAA+CGG | - | chr4.1:18365655-18365674 | MS.gene36484:intron | 25.0% |
| ! | TCCTTATGCTATTACAAATA+TGG | - | chr4.1:18365835-18365854 | MS.gene36484:intron | 25.0% |
| ! | TGCTTATAAAAAGAAATGGA+GGG | - | chr4.1:18367692-18367711 | MS.gene36484:intron | 25.0% |
| ! | TTAATGATTTCTTTACTGTG+TGG | - | chr4.1:18368439-18368458 | MS.gene36484:intron | 25.0% |
| ! | TTGCTTATAAAAAGAAATGG+AGG | - | chr4.1:18367691-18367710 | MS.gene36484:intron | 25.0% |
| !! | AAATTTATAGCATTGAGTTC+TGG | - | chr4.1:18366934-18366953 | MS.gene36484:intron | 25.0% |
| !! | AACATATCATATCCTTTTAC+TGG | - | chr4.1:18368683-18368702 | MS.gene36484:CDS | 25.0% |
| !! | ATGATACAGAAATTAACTTG+TGG | + | chr4.1:18366437-18366456 | None:intergenic | 25.0% |
| !! | TACTATAACTTTAAAGGTGA+TGG | - | chr4.1:18366465-18366484 | MS.gene36484:intron | 25.0% |
| !! | TTAAACCTTATCGAGATTTT+CGG | + | chr4.1:18365608-18365627 | None:intergenic | 25.0% |
| AAAAATAGAGTAAGCTGGAA+AGG | + | chr4.1:18366768-18366787 | None:intergenic | 30.0% | |
| AAAACATCAATCGGATGTAA+GGG | - | chr4.1:18367354-18367373 | MS.gene36484:intron | 30.0% | |
| AACAGAAAAATAGAGTAAGC+TGG | + | chr4.1:18366773-18366792 | None:intergenic | 30.0% | |
| ACAATAAAAGCCATAACAAC+AGG | - | chr4.1:18368064-18368083 | MS.gene36484:CDS | 30.0% | |
| ACGTGATAAAGACCATAATT+TGG | - | chr4.1:18368880-18368899 | MS.gene36484:CDS | 30.0% | |
| ATAAAGACCATAATTTGGAC+TGG | - | chr4.1:18368885-18368904 | MS.gene36484:CDS | 30.0% | |
| ATTAGAATCAACTGAGAGAA+TGG | - | chr4.1:18368164-18368183 | MS.gene36484:CDS | 30.0% | |
| ATTATTGAAGGGAGAAACTA+AGG | - | chr4.1:18367168-18367187 | MS.gene36484:intron | 30.0% | |
| CAATAAAAGCCATAACAACA+GGG | - | chr4.1:18368065-18368084 | MS.gene36484:CDS | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | + | chr4.1:18367642-18367661 | None:intergenic | 30.0% | |
| GCCATATTTGTAATAGCATA+AGG | + | chr4.1:18365839-18365858 | None:intergenic | 30.0% | |
| GCTTTCACTTTGCTAATTTA+TGG | + | chr4.1:18367736-18367755 | None:intergenic | 30.0% | |
| GGGTTTCATTTCTAATCATA+TGG | - | chr4.1:18368637-18368656 | MS.gene36484:CDS | 30.0% | |
| TAAAACATCAATCGGATGTA+AGG | - | chr4.1:18367353-18367372 | MS.gene36484:intron | 30.0% | |
| TGCTTATAAAAAGAAACGGA+GGG | + | chr4.1:18367577-18367596 | None:intergenic | 30.0% | |
| TTAGAATCAACTGAGAGAAT+GGG | - | chr4.1:18368165-18368184 | MS.gene36484:CDS | 30.0% | |
| TTAGTTACCAGTCCAAATTA+TGG | + | chr4.1:18368895-18368914 | None:intergenic | 30.0% | |
| TTGCTTATAAAAAGAAACGG+AGG | + | chr4.1:18367578-18367597 | None:intergenic | 30.0% | |
| ! | AAGTGGAAAGACAATTTGTT+AGG | - | chr4.1:18367472-18367491 | MS.gene36484:intron | 30.0% |
| ! | ATGAAAGTTAATTTGAGACC+AGG | + | chr4.1:18368260-18368279 | None:intergenic | 30.0% |
| ! | TCAAATTCTTTTGGATTTGG+TGG | - | chr4.1:18368944-18368963 | MS.gene36484:CDS | 30.0% |
| ! | TGTGTGTTTTCAACATCTTT+TGG | - | chr4.1:18366812-18366831 | MS.gene36484:intron | 30.0% |
| ! | TGTTGTTATGGCTTTTATTG+TGG | + | chr4.1:18368065-18368084 | None:intergenic | 30.0% |
| ! | TTTCAACATCTTTTGGTACA+CGG | - | chr4.1:18366819-18366838 | MS.gene36484:intron | 30.0% |
| !! | ATACAGAAATTAACTTGTGG+AGG | + | chr4.1:18366434-18366453 | None:intergenic | 30.0% |
| !! | ATAGTGAGAGCATTATTGAA+GGG | - | chr4.1:18367157-18367176 | MS.gene36484:intron | 30.0% |
| !! | CATGTCATTTGCTTCTTTTT+AGG | - | chr4.1:18367755-18367774 | MS.gene36484:intron | 30.0% |
| !! | CATTAATTTTGATGCCAGAA+GGG | + | chr4.1:18367863-18367882 | None:intergenic | 30.0% |
| !! | CGAGAGTACTATAACTTTAA+AGG | - | chr4.1:18366459-18366478 | MS.gene36484:intron | 30.0% |
| !! | TGATTACATATGGTTCTGAA+AGG | + | chr4.1:18368721-18368740 | None:intergenic | 30.0% |
| !! | TGTAATCATTTTGTTTGCCT+TGG | - | chr4.1:18368733-18368752 | MS.gene36484:CDS | 30.0% |
| !!! | CTTTTTTGGATCATGTACAA+AGG | + | chr4.1:18366331-18366350 | None:intergenic | 30.0% |
| !!! | GTTATTTTTGATTCATTCCC+TGG | - | chr4.1:18367954-18367973 | MS.gene36484:intron | 30.0% |
| AAACATCAATCGGATGTAAG+GGG | - | chr4.1:18367355-18367374 | MS.gene36484:intron | 35.0% | |
| AAACTGATTATTTGCAGAGG+AGG | + | chr4.1:18367392-18367411 | None:intergenic | 35.0% | |
| AAGCTGCTAGCATAAATAAG+TGG | - | chr4.1:18367455-18367474 | MS.gene36484:intron | 35.0% | |
| AATATGGCTTCAGCTTTACT+TGG | - | chr4.1:18365851-18365870 | MS.gene36484:intron | 35.0% | |
| AATCAGATTCTTAACTCCGT+CGG | + | chr4.1:18365780-18365799 | None:intergenic | 35.0% | |
| ACAGCATATGCATCAGTTAA+TGG | + | chr4.1:18367980-18367999 | None:intergenic | 35.0% | |
| ACCACGTGAGTAAAAAGAAA+AGG | + | chr4.1:18368528-18368547 | None:intergenic | 35.0% | |
| ACCTATCATTGCTGAATACT+TGG | - | chr4.1:18366519-18366538 | MS.gene36484:intron | 35.0% | |
| ACGTGAAATGAAAAATGCAC+TGG | + | chr4.1:18368864-18368883 | None:intergenic | 35.0% | |
| ATAAAACAGAAAGCTTTCGC+TGG | + | chr4.1:18367922-18367941 | None:intergenic | 35.0% | |
| ATATGGCTTCAGCTTTACTT+GGG | - | chr4.1:18365852-18365871 | MS.gene36484:intron | 35.0% | |
| ATGACATGATAATACCTTGG+TGG | + | chr4.1:18367886-18367905 | None:intergenic | 35.0% | |
| CAGCAGCATGAAATTAATGT+TGG | - | chr4.1:18368815-18368834 | MS.gene36484:CDS | 35.0% | |
| CATCAAAATTAATGCCACCA+AGG | - | chr4.1:18367869-18367888 | MS.gene36484:intron | 35.0% | |
| CATTCATCAGGTCAAATAGA+GGG | - | chr4.1:18367429-18367448 | MS.gene36484:intron | 35.0% | |
| CCTATCATTGCTGAATACTT+GGG | - | chr4.1:18366520-18366539 | MS.gene36484:intron | 35.0% | |
| CGTACGAATTGATTGATTGA+TGG | + | chr4.1:18368100-18368119 | None:intergenic | 35.0% | |
| TAGATTGATAAAGAACGTGC+TGG | - | chr4.1:18365713-18365732 | MS.gene36484:intron | 35.0% | |
| TAGTTACTTGCTCATTCATC+AGG | - | chr4.1:18367417-18367436 | MS.gene36484:intron | 35.0% | |
| TCATTCATCAGGTCAAATAG+AGG | - | chr4.1:18367428-18367447 | MS.gene36484:intron | 35.0% | |
| TCCATGACATGATAATACCT+TGG | + | chr4.1:18367889-18367908 | None:intergenic | 35.0% | |
| TGATGAATGAGCAAGTAACT+AGG | + | chr4.1:18367418-18367437 | None:intergenic | 35.0% | |
| TGCCTGGAAGAAAGAAAAAA+AGG | + | chr4.1:18368922-18368941 | None:intergenic | 35.0% | |
| TGTGATACCAGTCTATGATA+GGG | - | chr4.1:18368002-18368021 | MS.gene36484:intron | 35.0% | |
| ! | AAATTTTATCTGCCACCTCT+TGG | - | chr4.1:18368226-18368245 | MS.gene36484:CDS | 35.0% |
| ! | ACCAAGGTATTATCATGTCA+TGG | - | chr4.1:18367885-18367904 | MS.gene36484:intron | 35.0% |
| ! | ACCTTTTCTTTTTACTCACG+TGG | - | chr4.1:18368524-18368543 | MS.gene36484:intron | 35.0% |
| ! | AGAGAATGGGCTTTCATTAT+TGG | - | chr4.1:18368178-18368197 | MS.gene36484:CDS | 35.0% |
| ! | CCAAAAGAATTTGAAATGCC+TGG | + | chr4.1:18368938-18368957 | None:intergenic | 35.0% |
| ! | CCAGGCATTTCAAATTCTTT+TGG | - | chr4.1:18368935-18368954 | MS.gene36484:CDS | 35.0% |
| ! | GCTTTACTTGGGATTGATTT+AGG | - | chr4.1:18365863-18365882 | MS.gene36484:intron | 35.0% |
| ! | TCTGTTTTATAGATCATCGC+AGG | - | chr4.1:18367932-18367951 | MS.gene36484:intron | 35.0% |
| ! | TGCCATTATTCCTATTGGTT+TGG | - | chr4.1:18366009-18366028 | MS.gene36484:intron | 35.0% |
| ! | TGGGATTGATTTAGGTTTCA+GGG | - | chr4.1:18365871-18365890 | MS.gene36484:intron | 35.0% |
| ! | TGTCTTGTATTTCTGCATAC+TGG | - | chr4.1:18367251-18367270 | MS.gene36484:intron | 35.0% |
| ! | TTGGGATTGATTTAGGTTTC+AGG | - | chr4.1:18365870-18365889 | MS.gene36484:intron | 35.0% |
| ! | TTTCACGAAGTGTCTATAAG+TGG | - | chr4.1:18366368-18366387 | MS.gene36484:CDS | 35.0% |
| ! | TTTTGGTACACGGTACAATA+GGG | - | chr4.1:18366829-18366848 | MS.gene36484:intron | 35.0% |
| !! | AATTTGGACTGGTAACTAAC+TGG | - | chr4.1:18368896-18368915 | MS.gene36484:CDS | 35.0% |
| !! | ATGGTTCTGAAAGGCAAAAT+AGG | + | chr4.1:18368712-18368731 | None:intergenic | 35.0% |
| !! | ATTATTCCTATTGGTTTGGG+GGG | - | chr4.1:18366013-18366032 | MS.gene36484:intron | 35.0% |
| !! | CATAGTGAGAGCATTATTGA+AGG | - | chr4.1:18367156-18367175 | MS.gene36484:intron | 35.0% |
| !! | CATTATTCCTATTGGTTTGG+GGG | - | chr4.1:18366012-18366031 | MS.gene36484:intron | 35.0% |
| !! | CCATTATTCCTATTGGTTTG+GGG | - | chr4.1:18366011-18366030 | MS.gene36484:intron | 35.0% |
| !! | GCATTAATTTTGATGCCAGA+AGG | + | chr4.1:18367864-18367883 | None:intergenic | 35.0% |
| !! | GCCATTATTCCTATTGGTTT+GGG | - | chr4.1:18366010-18366029 | MS.gene36484:intron | 35.0% |
| AACGGATCCCTAATTGGATT+TGG | - | chr4.1:18365673-18365692 | MS.gene36484:intron | 40.0% | |
| ACGGTATCAAAATCAACTGC+AGG | + | chr4.1:18368782-18368801 | None:intergenic | 40.0% | |
| ACTATGGCGTTAGCATTTAG+TGG | - | chr4.1:18367083-18367102 | MS.gene36484:intron | 40.0% | |
| AGAGTAAGACAATACCTCCT+CGG | + | chr4.1:18366650-18366669 | None:intergenic | 40.0% | |
| ATATGCATCAGTTAATGGCC+AGG | + | chr4.1:18367975-18367994 | None:intergenic | 40.0% | |
| ATCATTGCTGAATACTTGGG+AGG | - | chr4.1:18366523-18366542 | MS.gene36484:intron | 40.0% | |
| ATCTTCAAGTGCTTTCTTCC+CGG | + | chr4.1:18365572-18365591 | None:intergenic | 40.0% | |
| ATGACCCTAAAACTGCTTCT+AGG | - | chr4.1:18366071-18366090 | MS.gene36484:CDS | 40.0% | |
| ATGACTGATCCAAGATCTGA+TGG | - | chr4.1:18366571-18366590 | MS.gene36484:intron | 40.0% | |
| ATGCTTCCAAATTCCCTACT+CGG | - | chr4.1:18365452-18365471 | MS.gene36484:intron | 40.0% | |
| CAAAATAGGAGGCCAGTAAA+AGG | + | chr4.1:18368698-18368717 | None:intergenic | 40.0% | |
| CACCCATAACAAAACCATCA+CGG | + | chr4.1:18366111-18366130 | None:intergenic | 40.0% | |
| CCCAAGTATTCAGCAATGAT+AGG | + | chr4.1:18366523-18366542 | None:intergenic | 40.0% | |
| CCCCAAACCAATAGGAATAA+TGG | + | chr4.1:18366014-18366033 | None:intergenic | 40.0% | |
| CTGTGATACCAGTCTATGAT+AGG | - | chr4.1:18368001-18368020 | MS.gene36484:intron | 40.0% | |
| CTTAGCAACAGCTTTACAAG+AGG | + | chr4.1:18366887-18366906 | None:intergenic | 40.0% | |
| GAAGCTGCCATTATTCCTAT+TGG | - | chr4.1:18366004-18366023 | MS.gene36484:intron | 40.0% | |
| GACAAATCAACATGCAGCAA+TGG | + | chr4.1:18367498-18367517 | None:intergenic | 40.0% | |
| GCTAACATAATGTAGCATCC+TGG | + | chr4.1:18367291-18367310 | None:intergenic | 40.0% | |
| GGAAAGGAAAAACACACTGA+AGG | + | chr4.1:18366752-18366771 | None:intergenic | 40.0% | |
| GTCAAGCCAAGATTTCTTAG+AGG | + | chr4.1:18367194-18367213 | None:intergenic | 40.0% | |
| TAAAACTGCTTCTAGGCCTT+GGG | - | chr4.1:18366078-18366097 | MS.gene36484:CDS | 40.0% | |
| TAAAAGCCATAACAACAGGG+TGG | - | chr4.1:18368068-18368087 | MS.gene36484:CDS | 40.0% | |
| TATGCATCAGTTAATGGCCA+GGG | + | chr4.1:18367974-18367993 | None:intergenic | 40.0% | |
| TATGTAAAGCTGTCTGCACA+CGG | - | chr4.1:18367037-18367056 | MS.gene36484:intron | 40.0% | |
| TCAAAATCAACTGCAGGTTC+TGG | + | chr4.1:18368776-18368795 | None:intergenic | 40.0% | |
| TGACTGATCCAAGATCTGAT+GGG | - | chr4.1:18366572-18366591 | MS.gene36484:intron | 40.0% | |
| TTTGGTACACGGTACAATAG+GGG | - | chr4.1:18366830-18366849 | MS.gene36484:intron | 40.0% | |
| TTTGTTTGCCTTGGTCTCTT+TGG | - | chr4.1:18368742-18368761 | MS.gene36484:CDS | 40.0% | |
| ! | AAGGCCTAGAAGCAGTTTTA+GGG | + | chr4.1:18366078-18366097 | None:intergenic | 40.0% |
| ! | CTAAGGCCTCTAAGAAATCT+TGG | - | chr4.1:18367185-18367204 | MS.gene36484:intron | 40.0% |
| ! | CTTTTGGTACACGGTACAAT+AGG | - | chr4.1:18366828-18366847 | MS.gene36484:intron | 40.0% |
| ! | GGGATTGATTTAGGTTTCAG+GGG | - | chr4.1:18365872-18365891 | MS.gene36484:intron | 40.0% |
| ! | GGTTGGGGTACCAATAAATA+AGG | + | chr4.1:18368337-18368356 | None:intergenic | 40.0% |
| ! | GTGGGATCACATTGATTGAT+AGG | - | chr4.1:18365425-18365444 | MS.gene36484:intron | 40.0% |
| ! | TTTTGTGGGGTGGATAAAAG+AGG | - | chr4.1:18368608-18368627 | MS.gene36484:CDS | 40.0% |
| !! | AAGAAAGCACTTGAAGATGC+TGG | - | chr4.1:18365574-18365593 | MS.gene36484:intron | 40.0% |
| !! | AAGGTTTTCAAGAACCCTTC+TGG | - | chr4.1:18367846-18367865 | MS.gene36484:intron | 40.0% |
| !! | GGTGGATAAAAGAGGTGTTT+GGG | - | chr4.1:18368616-18368635 | MS.gene36484:CDS | 40.0% |
| !! | GTGGATAAAAGAGGTGTTTG+GGG | - | chr4.1:18368617-18368636 | MS.gene36484:CDS | 40.0% |
| !! | GTTCTGAAAGGCAAAATAGG+AGG | + | chr4.1:18368709-18368728 | None:intergenic | 40.0% |
| !! | TAAAGAACGTGCTGGTGTTT+TGG | - | chr4.1:18365721-18365740 | MS.gene36484:intron | 40.0% |
| !! | TGCAGTTGATTTTGATACCG+TGG | - | chr4.1:18368781-18368800 | MS.gene36484:CDS | 40.0% |
| !!! | AGACCGTGATGGTTTTGTTA+TGG | - | chr4.1:18366105-18366124 | MS.gene36484:CDS | 40.0% |
| !!! | GACCGTGATGGTTTTGTTAT+GGG | - | chr4.1:18366106-18366125 | MS.gene36484:CDS | 40.0% |
| !!! | GATGGTTTTGTTATGGGTGA+AGG | - | chr4.1:18366112-18366131 | MS.gene36484:CDS | 40.0% |
| !!! | GGCCTTTTTTTCTTTCTTCC+AGG | - | chr4.1:18368917-18368936 | MS.gene36484:CDS | 40.0% |
| !!! | TCAAGTCGCGTTGTTTTTGT+GGG | - | chr4.1:18368594-18368613 | MS.gene36484:CDS | 40.0% |
| ACAAAACCCCCCAAACCAAT+AGG | + | chr4.1:18366022-18366041 | None:intergenic | 45.0% | |
| AGTGATCACAACACGCTTCT+TGG | + | chr4.1:18365335-18365354 | None:intergenic | 45.0% | |
| ATTCTGCACCAAAGAGACCA+AGG | + | chr4.1:18368753-18368772 | None:intergenic | 45.0% | |
| CATGCAACTTCCACTCTTGT+TGG | - | chr4.1:18367795-18367814 | MS.gene36484:intron | 45.0% | |
| CTAAAACTGCTTCTAGGCCT+TGG | - | chr4.1:18366077-18366096 | MS.gene36484:CDS | 45.0% | |
| GAACTGAACGGATCCCTAAT+TGG | - | chr4.1:18365667-18365686 | MS.gene36484:intron | 45.0% | |
| GAGTAAGACAATACCTCCTC+GGG | + | chr4.1:18366649-18366668 | None:intergenic | 45.0% | |
| GTCAGGAATGGGTGGTTTAA+CGG | - | chr4.1:18365748-18365767 | MS.gene36484:intron | 45.0% | |
| GTGATCACAACACGCTTCTT+GGG | + | chr4.1:18365334-18365353 | None:intergenic | 45.0% | |
| TCTGCCACCTCTTGGAATAA+TGG | - | chr4.1:18368234-18368253 | MS.gene36484:CDS | 45.0% | |
| TGCTGCCAATCACATTCGTA+GGG | - | chr4.1:18365949-18365968 | MS.gene36484:intron | 45.0% | |
| TTGGGATCCTTCTCTCTTTG+AGG | + | chr4.1:18365316-18365335 | None:intergenic | 45.0% | |
| ! | AAGAAGCGTGTTGTGATCAC+TGG | - | chr4.1:18365334-18365353 | MS.gene36484:CDS | 45.0% |
| ! | ATCCTTCTCTCTTTGAGGAG+CGG | + | chr4.1:18365311-18365330 | None:intergenic | 45.0% |
| ! | CAAGGCCTAGAAGCAGTTTT+AGG | + | chr4.1:18366079-18366098 | None:intergenic | 45.0% |
| ! | GGTTTAACGGTGTTTTCCGA+CGG | - | chr4.1:18365761-18365780 | MS.gene36484:intron | 45.0% |
| ! | TTTGTTATGGGTGAAGGTGC+TGG | - | chr4.1:18366118-18366137 | MS.gene36484:CDS | 45.0% |
| !! | CTGGTATCGATATCAGTACC+AGG | - | chr4.1:18367270-18367289 | MS.gene36484:intron | 45.0% |
| !! | GGGTGGATAAAAGAGGTGTT+TGG | - | chr4.1:18368615-18368634 | MS.gene36484:CDS | 45.0% |
| !! | TGAGGCCGATTTGATGATTG+CGG | - | chr4.1:18365973-18365992 | MS.gene36484:intron | 45.0% |
| !! | TTCCACTCTTGTTGGTGACT+TGG | - | chr4.1:18367803-18367822 | MS.gene36484:intron | 45.0% |
| !!! | AACGTGCTGGTGTTTTGGTT+GGG | - | chr4.1:18365726-18365745 | MS.gene36484:intron | 45.0% |
| !!! | AAGGTGCTGGAGTTTTGGTA+AGG | - | chr4.1:18366131-18366150 | MS.gene36484:CDS | 45.0% |
| !!! | CAAGTCGCGTTGTTTTTGTG+GGG | - | chr4.1:18368595-18368614 | MS.gene36484:CDS | 45.0% |
| !!! | CGGCATTGGAGGATTTTTTG+CGG | + | chr4.1:18365225-18365244 | None:intergenic | 45.0% |
| !!! | GTCAAGTCGCGTTGTTTTTG+TGG | - | chr4.1:18368593-18368612 | MS.gene36484:CDS | 45.0% |
| !!! | GTTTTGGTTGGGTCAGGAAT+GGG | - | chr4.1:18365737-18365756 | MS.gene36484:intron | 45.0% |
| !!! | TGTTTTGGTTGGGTCAGGAA+TGG | - | chr4.1:18365736-18365755 | MS.gene36484:intron | 45.0% |
| !!! | TTGGAGGATTTTTTGCGGAG+TGG | + | chr4.1:18365220-18365239 | None:intergenic | 45.0% |
| AAAACAGGACACACGCGACA+TGG | + | chr4.1:18366394-18366413 | None:intergenic | 50.0% | |
| AACCCTCAGAGCTAAACCCA+CGG | + | chr4.1:18365492-18365511 | None:intergenic | 50.0% | |
| ACATCGACGGGAAGAATGAC+CGG | - | chr4.1:18365512-18365531 | MS.gene36484:intron | 50.0% | |
| AGACGACGGAGAGTCTCTTT+GGG | + | chr4.1:18365270-18365289 | None:intergenic | 50.0% | |
| ATGCAGCCACCCTGTTGTTA+TGG | + | chr4.1:18368077-18368096 | None:intergenic | 50.0% | |
| CAATCACATTCGTAGGGGTG+AGG | - | chr4.1:18365955-18365974 | MS.gene36484:intron | 50.0% | |
| CAATGTGATCCCACTCTCAC+CGG | + | chr4.1:18365419-18365438 | None:intergenic | 50.0% | |
| CACCTCTTGGAATAATGGCC+TGG | - | chr4.1:18368239-18368258 | MS.gene36484:CDS | 50.0% | |
| CAGGCCATTATTCCAAGAGG+TGG | + | chr4.1:18368241-18368260 | None:intergenic | 50.0% | |
| CCATCACGGTCTTTATCCCA+AGG | + | chr4.1:18366097-18366116 | None:intergenic | 50.0% | |
| CCCACCCGCAATCATCAAAT+CGG | + | chr4.1:18365981-18366000 | None:intergenic | 50.0% | |
| CCTTGGGATAAAGACCGTGA+TGG | - | chr4.1:18366094-18366113 | MS.gene36484:CDS | 50.0% | |
| CGTGTTGTGATCACTGGCAT+GGG | - | chr4.1:18365340-18365359 | MS.gene36484:CDS | 50.0% | |
| CTCACCCCTACGAATGTGAT+TGG | + | chr4.1:18365957-18365976 | None:intergenic | 50.0% | |
| CTCGCTTCATGGCATGTTCA+AGG | + | chr4.1:18366495-18366514 | None:intergenic | 50.0% | |
| CTGCTGCCAATCACATTCGT+AGG | - | chr4.1:18365948-18365967 | MS.gene36484:intron | 50.0% | |
| CTTGAACATGCCATGAAGCG+AGG | - | chr4.1:18366493-18366512 | MS.gene36484:intron | 50.0% | |
| GACCAGGCCATTATTCCAAG+AGG | + | chr4.1:18368244-18368263 | None:intergenic | 50.0% | |
| GCTGCCAATCACATTCGTAG+GGG | - | chr4.1:18365950-18365969 | MS.gene36484:intron | 50.0% | |
| GGAGACAATCATCCTGTCTC+CGG | + | chr4.1:18365534-18365553 | None:intergenic | 50.0% | |
| GGAGACAGGATGATTGTCTC+CGG | - | chr4.1:18365533-18365552 | MS.gene36484:intron | 50.0% | |
| GTACACGGTACAATAGGGGA+TGG | - | chr4.1:18366834-18366853 | MS.gene36484:intron | 50.0% | |
| TAAAGCTGTCTGCACACGGT+GGG | - | chr4.1:18367041-18367060 | MS.gene36484:intron | 50.0% | |
| TGCCAAGTCACCAACAAGAG+TGG | + | chr4.1:18367808-18367827 | None:intergenic | 50.0% | |
| TGCGAACCGAGTAGGGAATT+TGG | + | chr4.1:18365461-18365480 | None:intergenic | 50.0% | |
| TGTGGGAAGGAGTAGCACTA+TGG | - | chr4.1:18367067-18367086 | MS.gene36484:intron | 50.0% | |
| TTCTACGAGAAGCTTCTCGC+CGG | - | chr4.1:18365397-18365416 | MS.gene36484:intron | 50.0% | |
| ! | AAATTCCCTACTCGGTTCGC+AGG | - | chr4.1:18365460-18365479 | MS.gene36484:intron | 50.0% |
| ! | CCGATTTGATGATTGCGGGT+GGG | - | chr4.1:18365978-18365997 | MS.gene36484:intron | 50.0% |
| ! | CGGTGCCGAAAATCTCGATA+AGG | - | chr4.1:18365600-18365619 | MS.gene36484:intron | 50.0% |
| ! | CTGCTGCTTGACATTTGCCA+CGG | + | chr4.1:18368801-18368820 | None:intergenic | 50.0% |
| ! | GCACTTGAAGATGCTGGTCT+CGG | - | chr4.1:18365580-18365599 | MS.gene36484:intron | 50.0% |
| ! | TTTTTGCGGAGTGGTTCGAG+TGG | + | chr4.1:18365211-18365230 | None:intergenic | 50.0% |
| !! | AGCTCTGAGGGTTACATCGA+CGG | - | chr4.1:18365499-18365518 | MS.gene36484:intron | 50.0% |
| !! | ATCCGTGGGTTTAGCTCTGA+GGG | - | chr4.1:18365487-18365506 | MS.gene36484:intron | 50.0% |
| !! | GAGGCCGATTTGATGATTGC+GGG | - | chr4.1:18365974-18365993 | MS.gene36484:intron | 50.0% |
| !! | GATCCAAGATCTGATGGGCT+TGG | - | chr4.1:18366577-18366596 | MS.gene36484:intron | 50.0% |
| !! | TCTATGATAGGGCACTGCCT+TGG | - | chr4.1:18368013-18368032 | MS.gene36484:intron | 50.0% |
| !!! | GAACGTGCTGGTGTTTTGGT+TGG | - | chr4.1:18365725-18365744 | MS.gene36484:intron | 50.0% |
| !!! | GAGTCTCTTTGGGGTTTTGG+CGG | + | chr4.1:18365260-18365279 | None:intergenic | 50.0% |
| !!! | GGAGAGTCTCTTTGGGGTTT+TGG | + | chr4.1:18365263-18365282 | None:intergenic | 50.0% |
| AAAGCTGTCTGCACACGGTG+GGG | - | chr4.1:18367042-18367061 | MS.gene36484:intron | 55.0% | |
| ACGCCAAGCCCATCAGATCT+TGG | + | chr4.1:18366583-18366602 | None:intergenic | 55.0% | |
| ATCTGACCTGCGAACCGAGT+AGG | + | chr4.1:18365469-18365488 | None:intergenic | 55.0% | |
| ATGGGTGGCGTCACTGTACA+TGG | - | chr4.1:18365358-18365377 | MS.gene36484:CDS | 55.0% | |
| CGGTACAATAGGGGATGGCA+TGG | - | chr4.1:18366839-18366858 | MS.gene36484:intron | 55.0% | |
| GACGACGGAGAGTCTCTTTG+GGG | + | chr4.1:18365269-18365288 | None:intergenic | 55.0% | |
| GAGACGACGGAGAGTCTCTT+TGG | + | chr4.1:18365271-18365290 | None:intergenic | 55.0% | |
| GATAGGTGCACCTCGCTTCA+TGG | + | chr4.1:18366506-18366525 | None:intergenic | 55.0% | |
| GCGTGTTGTGATCACTGGCA+TGG | - | chr4.1:18365339-18365358 | MS.gene36484:CDS | 55.0% | |
| GGAGTGGTTCGAGTGGTGAA+GGG | + | chr4.1:18365204-18365223 | None:intergenic | 55.0% | |
| GGCAGTGCCCTATCATAGAC+TGG | + | chr4.1:18368012-18368031 | None:intergenic | 55.0% | |
| GTAAAGCTGTCTGCACACGG+TGG | - | chr4.1:18367040-18367059 | MS.gene36484:intron | 55.0% | |
| GTTGTGATCACTGGCATGGG+TGG | - | chr4.1:18365343-18365362 | MS.gene36484:CDS | 55.0% | |
| TCGGATGTAAGGGGCCAAGT+TGG | - | chr4.1:18367364-18367383 | MS.gene36484:intron | 55.0% | |
| TCTGACCTGCGAACCGAGTA+GGG | + | chr4.1:18365468-18365487 | None:intergenic | 55.0% | |
| TGCCGCTCCTCAAAGAGAGA+AGG | - | chr4.1:18365306-18365325 | MS.gene36484:intron | 55.0% | |
| TTGGTTGGGTCAGGAATGGG+TGG | - | chr4.1:18365740-18365759 | MS.gene36484:intron | 55.0% | |
| ! | CAGAGCAGTCTTGTAGACGC+CGG | - | chr4.1:18366616-18366635 | MS.gene36484:intron | 55.0% |
| ! | TGGTGGACACAACTCTGTCG+TGG | - | chr4.1:18368961-18368980 | MS.gene36484:CDS | 55.0% |
| !! | GATCCGTGGGTTTAGCTCTG+AGG | - | chr4.1:18365486-18365505 | MS.gene36484:intron | 55.0% |
| !! | GCCGATTTGATGATTGCGGG+TGG | - | chr4.1:18365977-18365996 | MS.gene36484:intron | 55.0% |
| !! | GCTCTGAGGGTTACATCGAC+GGG | - | chr4.1:18365500-18365519 | MS.gene36484:intron | 55.0% |
| !! | TTGCAGAGGAGGCACCAACT+TGG | + | chr4.1:18367381-18367400 | None:intergenic | 55.0% |
| !!! | GCTGGTGTTTTGGTTGGGTC+AGG | - | chr4.1:18365731-18365750 | MS.gene36484:intron | 55.0% |
| !!! | GGGTGAAGGTGCTGGAGTTT+TGG | - | chr4.1:18366126-18366145 | MS.gene36484:CDS | 55.0% |
| !!! | GTCGCGTTGTTTTTGTGGGG+TGG | - | chr4.1:18368598-18368617 | MS.gene36484:CDS | 55.0% |
| !!! | TCTCTTTGGGGTTTTGGCGG+TGG | + | chr4.1:18365257-18365276 | None:intergenic | 55.0% |
| AAGCTTCTCGCCGGTGAGAG+TGG | - | chr4.1:18365406-18365425 | MS.gene36484:intron | 60.0% | |
| AGCTTCTCGCCGGTGAGAGT+GGG | - | chr4.1:18365407-18365426 | MS.gene36484:intron | 60.0% | |
| CGGAGTGGTTCGAGTGGTGA+AGG | + | chr4.1:18365205-18365224 | None:intergenic | 60.0% | |
| CGGCGTCTACAAGACTGCTC+TGG | + | chr4.1:18366618-18366637 | None:intergenic | 60.0% | |
| CGGGAAGAATGACCGGAGAC+AGG | - | chr4.1:18365519-18365538 | MS.gene36484:intron | 60.0% | |
| CTCCGGTACTGCAATGTCGC+CGG | - | chr4.1:18365550-18365569 | MS.gene36484:intron | 60.0% | |
| GGTGAAGGGCGGAGAGTGAA+GGG | + | chr4.1:18365190-18365209 | None:intergenic | 60.0% | |
| GGTTCGCAGGTCAGATCCGT+GGG | - | chr4.1:18365473-18365492 | MS.gene36484:intron | 60.0% | |
| GTGGTTCGAGTGGTGAAGGG+CGG | + | chr4.1:18365201-18365220 | None:intergenic | 60.0% | |
| TACCTCCTCGGGTGACACAC+CGG | + | chr4.1:18366638-18366657 | None:intergenic | 60.0% | |
| TCCCGGCGACATTGCAGTAC+CGG | + | chr4.1:18365555-18365574 | None:intergenic | 60.0% | |
| TCCGGTACTGCAATGTCGCC+GGG | - | chr4.1:18365551-18365570 | MS.gene36484:intron | 60.0% | |
| TGGTGAAGGGCGGAGAGTGA+AGG | + | chr4.1:18365191-18365210 | None:intergenic | 60.0% | |
| TTGAGGAGCGGCAGTGGTGA+CGG | + | chr4.1:18365299-18365318 | None:intergenic | 60.0% | |
| ! | CTCTCTTTGAGGAGCGGCAG+TGG | + | chr4.1:18365305-18365324 | None:intergenic | 60.0% |
| !!! | CTTTGGGGTTTTGGCGGTGG+TGG | + | chr4.1:18365254-18365273 | None:intergenic | 60.0% |
| ACACGGTGGGGTGTGTGGGA+AGG | - | chr4.1:18367054-18367073 | MS.gene36484:intron | 65.0% | |
| CGGTTCGCAGGTCAGATCCG+TGG | - | chr4.1:18365472-18365491 | MS.gene36484:intron | 65.0% | |
| CTGCACACGGTGGGGTGTGT+GGG | - | chr4.1:18367050-18367069 | MS.gene36484:intron | 65.0% | |
| TCTGCACACGGTGGGGTGTG+TGG | - | chr4.1:18367049-18367068 | MS.gene36484:intron | 65.0% | |
| ! | GGTGACGGCGGAAGAGACGA+CGG | + | chr4.1:18365284-18365303 | None:intergenic | 65.0% |
| !! | TGGGGTTTTGGCGGTGGTGG+TGG | + | chr4.1:18365251-18365270 | None:intergenic | 65.0% |
| !!! | GGTTTTGGCGGTGGTGGTGG+CGG | + | chr4.1:18365248-18365267 | None:intergenic | 65.0% |
| AGACGCCGGTGTGTCACCCG+AGG | - | chr4.1:18366630-18366649 | MS.gene36484:intron | 70.0% | |
| CACTGCCTTGGCGCAGCTGG+GGG | - | chr4.1:18368025-18368044 | MS.gene36484:CDS | 70.0% | |
| CCAAACCCCCAGCTGCGCCA+AGG | + | chr4.1:18368033-18368052 | None:intergenic | 70.0% | |
| CCTTGGCGCAGCTGGGGGTT+TGG | - | chr4.1:18368030-18368049 | MS.gene36484:CDS | 70.0% | |
| GCACTGCCTTGGCGCAGCTG+GGG | - | chr4.1:18368024-18368043 | MS.gene36484:CDS | 70.0% | |
| GGCACTGCCTTGGCGCAGCT+GGG | - | chr4.1:18368023-18368042 | MS.gene36484:CDS | 70.0% | |
| !! | AGGAGCGGCAGTGGTGACGG+CGG | + | chr4.1:18365296-18365315 | None:intergenic | 70.0% |
| !! | TTTGGCGGTGGTGGTGGCGG+CGG | + | chr4.1:18365245-18365264 | None:intergenic | 70.0% |
| CGCCGGTGTGTCACCCGAGG+AGG | - | chr4.1:18366633-18366652 | MS.gene36484:intron | 75.0% | |
| ! | GGGCACTGCCTTGGCGCAGC+TGG | - | chr4.1:18368022-18368041 | MS.gene36484:CDS | 75.0% |
| !! | GGTGGTGGCGGCGGCATTGG+AGG | + | chr4.1:18365236-18365255 | None:intergenic | 75.0% |
| !! | GGTGGTGGTGGCGGCGGCAT+TGG | + | chr4.1:18365239-18365258 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18365163 | 18369006 | 18365163 | ID=MS.gene36484 |
| chr4.1 | mRNA | 18365163 | 18369006 | 18365163 | ID=MS.gene36484.t1;Parent=MS.gene36484 |
| chr4.1 | exon | 18368548 | 18369006 | 18368548 | ID=MS.gene36484.t1.exon1;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18368548 | 18369006 | 18368548 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18368022 | 18368453 | 18368022 | ID=MS.gene36484.t1.exon2;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18368022 | 18368453 | 18368022 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18367515 | 18367688 | 18367515 | ID=MS.gene36484.t1.exon3;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18367515 | 18367688 | 18367515 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18366279 | 18366392 | 18366279 | ID=MS.gene36484.t1.exon4;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18366279 | 18366392 | 18366279 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18366055 | 18366156 | 18366055 | ID=MS.gene36484.t1.exon5;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18366055 | 18366156 | 18366055 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18365333 | 18365399 | 18365333 | ID=MS.gene36484.t1.exon6;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18365333 | 18365399 | 18365333 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| chr4.1 | exon | 18365163 | 18365230 | 18365163 | ID=MS.gene36484.t1.exon7;Parent=MS.gene36484.t1 |
| chr4.1 | CDS | 18365163 | 18365230 | 18365163 | ID=cds.MS.gene36484.t1;Parent=MS.gene36484.t1 |
| Gene Sequence |
| Protein sequence |
