Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37922.t1 | XP_003602901.2 | 96.7 | 963 | 32 | 0 | 1 | 963 | 1 | 963 | 0.00E+00 | 1495.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37922.t1 | P0DMS1 | 42.1 | 979 | 485 | 20 | 1 | 947 | 1 | 929 | 9.2e-173 | 609.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37922.t1 | G7J527 | 95.7 | 945 | 39 | 1 | 21 | 963 | 16 | 960 | 0.0e+00 | 1431.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027791 | MS.gene37922 | PPI |
| MS.gene070686 | MS.gene37922 | PPI |
| MS.gene048346 | MS.gene37922 | PPI |
| MS.gene069111 | MS.gene37922 | PPI |
| MS.gene37922 | MS.gene046432 | PPI |
| MS.gene065209 | MS.gene37922 | PPI |
| MS.gene37922 | MS.gene008915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37922.t1 | MTR_3g100190 | 96.402 | 945 | 32 | 1 | 21 | 963 | 16 | 960 | 0.0 | 1843 |
| MS.gene37922.t1 | MTR_5g066340 | 56.972 | 1004 | 367 | 19 | 1 | 963 | 1 | 980 | 0.0 | 1023 |
| MS.gene37922.t1 | MTR_8g471130 | 45.009 | 551 | 266 | 13 | 1 | 526 | 1 | 539 | 1.15e-130 | 419 |
| MS.gene37922.t1 | MTR_5g032060 | 47.269 | 476 | 231 | 6 | 1 | 470 | 1 | 462 | 1.02e-123 | 404 |
| MS.gene37922.t1 | MTR_5g032060 | 35.154 | 421 | 212 | 12 | 546 | 952 | 769 | 1142 | 1.79e-61 | 228 |
| MS.gene37922.t1 | MTR_1g103160 | 32.113 | 355 | 200 | 8 | 1 | 343 | 1 | 326 | 2.52e-38 | 156 |
| MS.gene37922.t1 | MTR_1g103160 | 32.113 | 355 | 200 | 8 | 1 | 343 | 4 | 329 | 2.54e-38 | 156 |
| MS.gene37922.t1 | MTR_1g071540 | 33.069 | 378 | 178 | 13 | 10 | 340 | 15 | 364 | 4.13e-36 | 149 |
| MS.gene37922.t1 | MTR_7g095410 | 58.333 | 96 | 40 | 0 | 10 | 105 | 13 | 108 | 9.84e-32 | 135 |
| MS.gene37922.t1 | MTR_7g095410 | 58.333 | 96 | 40 | 0 | 10 | 105 | 13 | 108 | 9.98e-32 | 135 |
| MS.gene37922.t1 | MTR_5g006520 | 31.273 | 275 | 138 | 5 | 10 | 276 | 13 | 244 | 3.14e-30 | 130 |
| MS.gene37922.t1 | MTR_5g006520 | 43.662 | 142 | 69 | 2 | 10 | 151 | 13 | 143 | 6.08e-30 | 129 |
| MS.gene37922.t1 | MTR_5g075490 | 52.747 | 91 | 43 | 0 | 1 | 91 | 12 | 102 | 2.67e-26 | 115 |
| MS.gene37922.t1 | MTR_1g103160 | 30.031 | 323 | 185 | 8 | 33 | 343 | 1 | 294 | 2.28e-25 | 114 |
| MS.gene37922.t1 | MTR_7g095410 | 56.164 | 73 | 32 | 0 | 33 | 105 | 1 | 73 | 1.65e-19 | 95.5 |
| MS.gene37922.t1 | MTR_7g108070 | 50.000 | 78 | 36 | 2 | 12 | 86 | 11 | 88 | 1.78e-19 | 90.9 |
| MS.gene37922.t1 | MTR_1g088965 | 45.570 | 79 | 42 | 1 | 12 | 89 | 17 | 95 | 1.66e-17 | 87.4 |
| MS.gene37922.t1 | MTR_3g467610 | 62.069 | 58 | 22 | 0 | 33 | 90 | 15 | 72 | 4.86e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37922.t1 | AT1G58215 | 45.610 | 991 | 447 | 23 | 1 | 953 | 1 | 937 | 0.0 | 746 |
| MS.gene37922.t1 | AT1G09720 | 42.482 | 991 | 472 | 27 | 1 | 962 | 1 | 922 | 0.0 | 662 |
| MS.gene37922.t1 | AT5G10500 | 40.506 | 632 | 315 | 18 | 1 | 618 | 1 | 585 | 1.30e-123 | 396 |
| MS.gene37922.t1 | AT5G10500 | 38.073 | 218 | 131 | 2 | 734 | 950 | 627 | 841 | 2.38e-41 | 164 |
| MS.gene37922.t1 | AT2G22560 | 35.038 | 391 | 186 | 6 | 568 | 951 | 613 | 942 | 1.04e-63 | 233 |
| MS.gene37922.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 7.08e-35 | 145 |
| MS.gene37922.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 7.08e-35 | 145 |
| MS.gene37922.t1 | AT3G22790 | 34.576 | 295 | 144 | 9 | 10 | 300 | 13 | 262 | 7.08e-35 | 145 |
| MS.gene37922.t1 | AT4G02710 | 30.795 | 302 | 176 | 6 | 10 | 291 | 13 | 301 | 3.94e-32 | 135 |
| MS.gene37922.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 6.03e-32 | 135 |
| MS.gene37922.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 6.03e-32 | 135 |
| MS.gene37922.t1 | AT1G03080 | 33.221 | 298 | 149 | 10 | 10 | 278 | 12 | 288 | 6.03e-32 | 135 |
| MS.gene37922.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 8.07e-32 | 135 |
| MS.gene37922.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 8.07e-32 | 135 |
| MS.gene37922.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 8.07e-32 | 135 |
| MS.gene37922.t1 | AT4G14760 | 33.333 | 261 | 128 | 5 | 10 | 270 | 13 | 227 | 8.07e-32 | 135 |
| MS.gene37922.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 14 | 102 | 4.66e-24 | 107 |
| MS.gene37922.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 14 | 102 | 4.66e-24 | 107 |
| MS.gene37922.t1 | AT2G30500 | 52.809 | 89 | 42 | 0 | 3 | 91 | 13 | 101 | 5.05e-24 | 107 |
| MS.gene37922.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.34e-22 | 103 |
| MS.gene37922.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.34e-22 | 103 |
| MS.gene37922.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.51e-22 | 103 |
| MS.gene37922.t1 | AT5G58320 | 48.913 | 92 | 47 | 0 | 3 | 94 | 14 | 105 | 1.51e-22 | 103 |
| MS.gene37922.t1 | AT2G47920 | 46.809 | 94 | 47 | 2 | 12 | 104 | 10 | 101 | 5.28e-22 | 96.3 |
| MS.gene37922.t1 | AT2G47920 | 46.809 | 94 | 47 | 2 | 12 | 104 | 10 | 101 | 5.28e-22 | 96.3 |
| MS.gene37922.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 1.03e-20 | 93.6 |
| MS.gene37922.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 1.03e-20 | 93.6 |
| MS.gene37922.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 1.03e-20 | 93.6 |
| MS.gene37922.t1 | AT1G03470 | 53.947 | 76 | 34 | 1 | 12 | 86 | 8 | 83 | 1.03e-20 | 93.6 |
| MS.gene37922.t1 | AT5G58320 | 48.387 | 62 | 32 | 0 | 33 | 94 | 1 | 62 | 4.99e-12 | 69.7 |
| MS.gene37922.t1 | AT4G03153 | 39.024 | 82 | 45 | 2 | 12 | 88 | 7 | 88 | 5.38e-12 | 66.6 |
Find 139 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCTCTTTCAACTTATTT+AGG | 0.097951 | 3.3:+83146944 | None:intergenic |
| CAAGCTTCAGAAAGAAATTT+TGG | 0.145445 | 3.3:-83147166 | MS.gene37922:CDS |
| TTTAATCTTGAACATCTTTC+AGG | 0.163584 | 3.3:-83146385 | MS.gene37922:CDS |
| TTTGGGATACTTGGAGGTTT+AGG | 0.191977 | 3.3:+83147327 | None:intergenic |
| TTGAATCAGATGTTTGTAAA+TGG | 0.230787 | 3.3:-83146016 | MS.gene37922:CDS |
| GAAGTTCCAACAATCTTTAC+AGG | 0.233406 | 3.3:-83145196 | MS.gene37922:CDS |
| TCCACAAAATTTATCAGTTC+TGG | 0.242133 | 3.3:+83147555 | None:intergenic |
| CTTAAAATCATTGATGATAA+TGG | 0.242555 | 3.3:-83147621 | MS.gene37922:CDS |
| TACCTCTTTCAACTTATTTA+GGG | 0.249240 | 3.3:+83146945 | None:intergenic |
| TTGGGATACTTGGAGGTTTA+GGG | 0.251548 | 3.3:+83147328 | None:intergenic |
| TCTCTCAAATGTCTAAATAT+TGG | 0.252662 | 3.3:+83145084 | None:intergenic |
| TAACGACGCACGGGCTTTAA+TGG | 0.252925 | 3.3:-83146998 | MS.gene37922:CDS |
| GGAGGTAATGGATTAGTTTC+AGG | 0.253642 | 3.3:+83147387 | None:intergenic |
| ATATATGGAAACATCTATAT+TGG | 0.275428 | 3.3:+83144601 | None:intergenic |
| CCTTTGAGATCTTTCTTATT+CGG | 0.276817 | 3.3:-83144718 | MS.gene37922:CDS |
| TTGAGGAGAATTTAGAATTC+TGG | 0.280446 | 3.3:-83145251 | MS.gene37922:CDS |
| TGTAGGTAAGGTTGTTAGTT+TGG | 0.284837 | 3.3:-83146641 | MS.gene37922:CDS |
| TACAAATTTGAAAACCTTAG+AGG | 0.285571 | 3.3:-83146865 | MS.gene37922:CDS |
| AATGAACCTCCTTAACCTTT+TGG | 0.290447 | 3.3:+83146887 | None:intergenic |
| TAAGAACTGAATTATCATTA+TGG | 0.295675 | 3.3:-83145059 | MS.gene37922:CDS |
| CCTTTCCAAGCAAACGAATC+AGG | 0.298097 | 3.3:-83146836 | MS.gene37922:CDS |
| TTAAAATCATTGATGATAAT+GGG | 0.300487 | 3.3:-83147620 | MS.gene37922:CDS |
| AGATGAGGAAGGGGAGAATT+TGG | 0.301275 | 3.3:-83146341 | MS.gene37922:CDS |
| AATCCAACAATTCAATGTTC+AGG | 0.323293 | 3.3:-83147222 | MS.gene37922:CDS |
| GAAATTGAAGACAAAGTTAC+AGG | 0.328085 | 3.3:-83147081 | MS.gene37922:CDS |
| AAACCTGAACATTGAATTGT+TGG | 0.328621 | 3.3:+83147219 | None:intergenic |
| GAAGGTTTGAGTTATGTAAA+AGG | 0.332066 | 3.3:-83144835 | MS.gene37922:CDS |
| GTTTATCTCTTCATCCTTAG+TGG | 0.332491 | 3.3:+83145581 | None:intergenic |
| TATATGGAAACATCTATATT+GGG | 0.335531 | 3.3:+83144602 | None:intergenic |
| TCAGGACAAAACAATCAAAA+TGG | 0.336738 | 3.3:-83148132 | MS.gene37922:CDS |
| ATTCTGTAATGGACTTGTTC+AGG | 0.343736 | 3.3:+83147438 | None:intergenic |
| AAAACCTTCTTTGGGATACT+TGG | 0.346431 | 3.3:+83147318 | None:intergenic |
| TGGAAAGGAAGTTACCTCTA+AGG | 0.346905 | 3.3:+83146851 | None:intergenic |
| TCTTGTAAGCTACACATTGA+TGG | 0.348520 | 3.3:+83144991 | None:intergenic |
| TTAAGTCCTGTAAAGATTGT+TGG | 0.351780 | 3.3:+83145190 | None:intergenic |
| AAATTCCGCTTCGAAATTGA+TGG | 0.356675 | 3.3:-83145279 | MS.gene37922:CDS |
| GGAAAAGCTTGAGGAAGATT+CGG | 0.356754 | 3.3:-83146710 | MS.gene37922:CDS |
| TAACAAAAGGATGAAAGAAT+TGG | 0.369828 | 3.3:-83146494 | MS.gene37922:CDS |
| TAAAGTTGAATCACTTGATC+TGG | 0.371940 | 3.3:-83146068 | MS.gene37922:CDS |
| ATCTCCCTGATTCGTTTGCT+TGG | 0.373115 | 3.3:+83146831 | None:intergenic |
| ATCCGGATTTGTTTCTGAAC+TGG | 0.375791 | 3.3:+83145539 | None:intergenic |
| TCTGTTTGGTTATTAGGGTT+AGG | 0.381092 | 3.3:+83147366 | None:intergenic |
| ACGCGGTTCAAGGAGATAAC+AGG | 0.390331 | 3.3:-83145473 | MS.gene37922:CDS |
| TTTCTTGATAGCAACATAGA+AGG | 0.397480 | 3.3:+83147288 | None:intergenic |
| AATATCGATATGTCATCAAT+TGG | 0.412156 | 3.3:-83145372 | MS.gene37922:CDS |
| TTATTAGGGTTAGGAGGTAA+TGG | 0.417397 | 3.3:+83147375 | None:intergenic |
| GAAAAGCTTGAGGAAGATTC+GGG | 0.417598 | 3.3:-83146709 | MS.gene37922:CDS |
| AGAAGCATACCAAAAGGTTA+AGG | 0.421409 | 3.3:-83146896 | MS.gene37922:CDS |
| AAACTGAGAAAGAGTTTGTA+AGG | 0.428032 | 3.3:-83147137 | MS.gene37922:CDS |
| GATATGCTTGAACATGATAT+AGG | 0.429964 | 3.3:-83146754 | MS.gene37922:CDS |
| CTGTATTGTCTCTGTAGTGC+TGG | 0.432223 | 3.3:+83144649 | None:intergenic |
| AGAACACAATGAAGTATTGC+AGG | 0.435549 | 3.3:-83145034 | MS.gene37922:CDS |
| CATCAAGCTGCAAAGTTTCA+AGG | 0.443442 | 3.3:-83144910 | MS.gene37922:CDS |
| TGAAAGAGAAAAGATTATGT+TGG | 0.446928 | 3.3:-83145987 | MS.gene37922:CDS |
| GAGGTAATGGATTAGTTTCA+GGG | 0.448765 | 3.3:+83147388 | None:intergenic |
| ACAAAGCTTAGAAGAGGATA+AGG | 0.454706 | 3.3:-83146545 | MS.gene37922:CDS |
| CATCTTCGTCTATTCTGTAA+TGG | 0.454957 | 3.3:+83147427 | None:intergenic |
| CCTCTTGAAAACGCGGTTCA+AGG | 0.456072 | 3.3:-83145483 | MS.gene37922:CDS |
| TGTGCAAGATCTAACACAAC+AGG | 0.463867 | 3.3:-83146125 | MS.gene37922:CDS |
| AACAGATATGGAGGAGATAG+TGG | 0.465013 | 3.3:-83147652 | MS.gene37922:intron |
| ACCTTCTTTGGGATACTTGG+AGG | 0.469688 | 3.3:+83147321 | None:intergenic |
| ATCACTTGATCTGGAAACTA+AGG | 0.473175 | 3.3:-83146059 | MS.gene37922:CDS |
| AAGAGAAAAGATTATGTTGG+AGG | 0.476441 | 3.3:-83145984 | MS.gene37922:CDS |
| AAGAACTATAACGATGTAAC+GGG | 0.477650 | 3.3:-83145944 | MS.gene37922:CDS |
| GGTGGTGGGTTAGCCACATC+AGG | 0.479597 | 3.3:-83148150 | MS.gene37922:CDS |
| TCAATGTTCAGGTTTGAGTA+AGG | 0.483983 | 3.3:-83147211 | MS.gene37922:CDS |
| CCTGATTCGTTTGCTTGGAA+AGG | 0.489020 | 3.3:+83146836 | None:intergenic |
| GACAAAACAATCAAAATGGC+TGG | 0.492493 | 3.3:-83148128 | MS.gene37922:CDS |
| TCTATGTTGCTATCAAGAAA+AGG | 0.493810 | 3.3:-83147285 | MS.gene37922:CDS |
| CCAATGCATATTCATGGTGG+TGG | 0.493918 | 3.3:-83148165 | MS.gene37922:CDS |
| GAAGATCGTGCTGAAAATAT+CGG | 0.494455 | 3.3:-83146211 | MS.gene37922:CDS |
| CAGCAACCAATGCATATTCA+TGG | 0.495304 | 3.3:-83148171 | MS.gene37922:CDS |
| CGAAATTGATGGTTTGCTTG+AGG | 0.497327 | 3.3:-83145268 | MS.gene37922:CDS |
| GAAGAATGTAGTTGCCACTA+AGG | 0.498077 | 3.3:-83145595 | MS.gene37922:CDS |
| ATTCAGAAAATAGTAACAAA+AGG | 0.498532 | 3.3:-83146507 | MS.gene37922:CDS |
| TAATGCTCTATATGCTCTAA+AGG | 0.501026 | 3.3:+83147527 | None:intergenic |
| AGATGATAAGTCTAGATTGA+AGG | 0.502870 | 3.3:-83146173 | MS.gene37922:CDS |
| TTTCTAACAGTGAAAGGGAA+TGG | 0.507447 | 3.3:+83145304 | None:intergenic |
| AGAATTTAGAATTCTGGTTG+AGG | 0.510468 | 3.3:-83145245 | MS.gene37922:CDS |
| TGTGAAACTAGATGAGGAAG+GGG | 0.510876 | 3.3:-83146350 | MS.gene37922:CDS |
| AAGGATGAAAGAATTGGAAG+AGG | 0.511792 | 3.3:-83146488 | MS.gene37922:CDS |
| GAGATGATCGATGAGCTTGT+AGG | 0.511931 | 3.3:-83146658 | MS.gene37922:CDS |
| ACCTCCAAGTATCCCAAAGA+AGG | 0.513746 | 3.3:-83147322 | MS.gene37922:CDS |
| AACCCTAAATAAGTTGAAAG+AGG | 0.513748 | 3.3:-83146947 | MS.gene37922:CDS |
| AGCTAGAGAAGCATACCAAA+AGG | 0.514253 | 3.3:-83146902 | MS.gene37922:CDS |
| GATCGATGAGCTTGTAGGTA+AGG | 0.515149 | 3.3:-83146653 | MS.gene37922:CDS |
| GTGGTGCGAGGACTTTCATC+CGG | 0.521655 | 3.3:+83145522 | None:intergenic |
| CTTTCCAAGCAAACGAATCA+GGG | 0.523805 | 3.3:-83146835 | MS.gene37922:CDS |
| TAAGGTTGTTAGTTTGGAAA+CGG | 0.528715 | 3.3:-83146635 | MS.gene37922:CDS |
| ACGGCAGTTACTTCTCAGAA+TGG | 0.533133 | 3.3:-83146616 | MS.gene37922:CDS |
| GTACTAGCTATATCTGAAGA+TGG | 0.534842 | 3.3:+83145435 | None:intergenic |
| GTTTGGTTATTAGGGTTAGG+AGG | 0.537743 | 3.3:+83147369 | None:intergenic |
| TACCAGTTCAGAAACAAATC+CGG | 0.541447 | 3.3:-83145541 | MS.gene37922:CDS |
| GAAGAACTATAACGATGTAA+CGG | 0.541460 | 3.3:-83145945 | MS.gene37922:CDS |
| GTTTCTAGTGAACTACAAGA+AGG | 0.543650 | 3.3:-83144853 | MS.gene37922:CDS |
| AGGCATTCTAGCGCGGCTTG+TGG | 0.544301 | 3.3:+83144738 | None:intergenic |
| TGAAGAATTGAGTCAAGCAA+TGG | 0.548068 | 3.3:-83144785 | MS.gene37922:CDS |
| AGTTACTTCTCAGAATGGAT+TGG | 0.549899 | 3.3:-83146611 | MS.gene37922:CDS |
| AAAGAGCGGAAATGTACTAC+AGG | 0.550960 | 3.3:-83147584 | MS.gene37922:CDS |
| AGCAATCGTGAATGATGCTA+AGG | 0.558867 | 3.3:-83146233 | MS.gene37922:CDS |
| CATGTTGCAAGAGAGGATTA+AGG | 0.559763 | 3.3:-83146731 | MS.gene37922:CDS |
| GAAGAATTGAGTCAAGCAAT+GGG | 0.560171 | 3.3:-83144784 | MS.gene37922:CDS |
| ATATAGGCATGTTGCAAGAG+AGG | 0.570909 | 3.3:-83146738 | MS.gene37922:CDS |
| CAAATATTTAACAGATATGG+AGG | 0.572308 | 3.3:-83147661 | MS.gene37922:intron |
| ATGTGAAACTAGATGAGGAA+GGG | 0.573018 | 3.3:-83146351 | MS.gene37922:CDS |
| TATGGAGGAGATAGTGGCTG+AGG | 0.575060 | 3.3:-83147646 | MS.gene37922:CDS |
| AATGTGAAACTAGATGAGGA+AGG | 0.576478 | 3.3:-83146352 | MS.gene37922:CDS |
| CCACCACCATGAATATGCAT+TGG | 0.576750 | 3.3:+83148165 | None:intergenic |
| GAGGATTAAGGAAAAGCTTG+AGG | 0.577900 | 3.3:-83146719 | MS.gene37922:CDS |
| GAAATATGATCATCTATCAA+AGG | 0.578698 | 3.3:-83147499 | MS.gene37922:CDS |
| TTCTAATGGAAAACCAAGTG+AGG | 0.579702 | 3.3:-83146296 | MS.gene37922:CDS |
| AAATATACAAAGCTTAGAAG+AGG | 0.584471 | 3.3:-83146551 | MS.gene37922:CDS |
| CGCGGTTCAAGGAGATAACA+GGG | 0.584707 | 3.3:-83145472 | MS.gene37922:CDS |
| TAAAATCATTGATGATAATG+GGG | 0.586550 | 3.3:-83147619 | MS.gene37922:CDS |
| AGCATACCAAAAGGTTAAGG+AGG | 0.605993 | 3.3:-83146893 | MS.gene37922:CDS |
| CCGAATAAGAAAGATCTCAA+AGG | 0.611880 | 3.3:+83144718 | None:intergenic |
| CAATGCATATTCATGGTGGT+GGG | 0.614885 | 3.3:-83148164 | MS.gene37922:CDS |
| ACTTGATCTGGAAACTAAGG+AGG | 0.615217 | 3.3:-83146056 | MS.gene37922:CDS |
| TGGCTGGAACAAAGTCTCCA+AGG | 0.616166 | 3.3:-83148112 | MS.gene37922:intron |
| ATCTCAAAGGCATTCTAGCG+CGG | 0.618902 | 3.3:+83144731 | None:intergenic |
| ACATAGAAGAAGTGTCAGCT+CGG | 0.622596 | 3.3:-83147259 | MS.gene37922:CDS |
| AGGCGCTTCTTCGACTAGAG+TGG | 0.624160 | 3.3:+83145503 | None:intergenic |
| ACGGGCTTTAATGGCAGCCA+CGG | 0.624491 | 3.3:-83146989 | MS.gene37922:CDS |
| GAATCAAGTTGAAGAAACAA+AGG | 0.626725 | 3.3:-83144696 | MS.gene37922:CDS |
| ATATGGAAACATCTATATTG+GGG | 0.629685 | 3.3:+83144603 | None:intergenic |
| TAATTGAAGATAACGACGCA+CGG | 0.633150 | 3.3:-83147008 | MS.gene37922:CDS |
| CACCAACATGTTGAAAACAC+AGG | 0.639859 | 3.3:-83145396 | MS.gene37922:CDS |
| GGTACAATCACGATCATCTG+AGG | 0.641129 | 3.3:-83146926 | MS.gene37922:CDS |
| AATTGAAGATAACGACGCAC+GGG | 0.642654 | 3.3:-83147007 | MS.gene37922:CDS |
| TTTACATGAATTTAACGCCG+TGG | 0.662543 | 3.3:+83146972 | None:intergenic |
| AACGGGCAAGCTCAACAATG+TGG | 0.678594 | 3.3:-83145927 | MS.gene37922:CDS |
| GTTCAAGGAGATAACAGGGA+GGG | 0.679032 | 3.3:-83145468 | MS.gene37922:CDS |
| GCAAACCATCAATTTCGAAG+CGG | 0.679223 | 3.3:+83145274 | None:intergenic |
| CAACCAATGCATATTCATGG+TGG | 0.706967 | 3.3:-83148168 | MS.gene37922:CDS |
| GGACTCATTTGCTCAAAGAG+CGG | 0.709268 | 3.3:-83147598 | MS.gene37922:CDS |
| CATGAAACAAGAAATCAACA+AGG | 0.709885 | 3.3:-83144875 | MS.gene37922:CDS |
| AGAAGCGCCTCTTGAAAACG+CGG | 0.728466 | 3.3:-83145490 | MS.gene37922:CDS |
| TCTTCGACTAGAGTGGTGCG+AGG | 0.734077 | 3.3:+83145510 | None:intergenic |
| GGTTCAAGGAGATAACAGGG+AGG | 0.787897 | 3.3:-83145469 | MS.gene37922:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATATTTAACAGATA+TGG | - | chr3.3:83145135-83145154 | MS.gene37922:CDS | 15.0% |
| !! | ACATTGTTTAGATATATAAT+TGG | - | chr3.3:83144995-83145014 | MS.gene37922:CDS | 15.0% |
| !! | AGTTAACAAATTTAACATAT+AGG | - | chr3.3:83147000-83147019 | MS.gene37922:CDS | 15.0% |
| !!! | ATGTTAAATTTGTTAACTTA+TGG | + | chr3.3:83146998-83147017 | None:intergenic | 15.0% |
| !!! | TTAAAATCATTGATGATAAT+GGG | - | chr3.3:83145179-83145198 | MS.gene37922:CDS | 15.0% |
| !! | ACAAAATGATTCATAATGTA+CGG | - | chr3.3:83145034-83145053 | MS.gene37922:CDS | 20.0% |
| !! | ATTCAGAAAATAGTAACAAA+AGG | - | chr3.3:83146292-83146311 | MS.gene37922:CDS | 20.0% |
| !! | TAAGAACTGAATTATCATTA+TGG | - | chr3.3:83147740-83147759 | MS.gene37922:intron | 20.0% |
| !!! | AAGAATAAAAGCTTTTCTAA+TGG | - | chr3.3:83146489-83146508 | MS.gene37922:CDS | 20.0% |
| !!! | AATTTCCCAATATTTTTCAT+AGG | + | chr3.3:83145704-83145723 | None:intergenic | 20.0% |
| !!! | ATTCGTTTTAATTTTATTGC+GGG | - | chr3.3:83144832-83144851 | MS.gene37922:CDS | 20.0% |
| !!! | CATTCGTTTTAATTTTATTG+CGG | - | chr3.3:83144831-83144850 | MS.gene37922:CDS | 20.0% |
| !!! | CTTAAAATCATTGATGATAA+TGG | - | chr3.3:83145178-83145197 | MS.gene37922:CDS | 20.0% |
| !!! | TAAAATCATTGATGATAATG+GGG | - | chr3.3:83145180-83145199 | MS.gene37922:CDS | 20.0% |
| !!! | TGAAGGATAATATTGATTTT+AGG | - | chr3.3:83146643-83146662 | MS.gene37922:CDS | 20.0% |
| !!! | TGCATATCTAATTAGTTTTA+TGG | + | chr3.3:83147157-83147176 | None:intergenic | 20.0% |
| ! | AAATATACAAAGCTTAGAAG+AGG | - | chr3.3:83146248-83146267 | MS.gene37922:CDS | 25.0% |
| ! | AATATCGATATGTCATCAAT+TGG | - | chr3.3:83147427-83147446 | MS.gene37922:CDS | 25.0% |
| ! | AGCATTCCTATGAAAAATAT+TGG | - | chr3.3:83145695-83145714 | MS.gene37922:intron | 25.0% |
| ! | ATCATGTACTACTAAGAAAA+TGG | + | chr3.3:83144955-83144974 | None:intergenic | 25.0% |
| ! | ATCCATTATCATTAATTCCA+TGG | - | chr3.3:83144776-83144795 | MS.gene37922:CDS | 25.0% |
| ! | CAAATATTTAACAGATATGG+AGG | - | chr3.3:83145138-83145157 | MS.gene37922:CDS | 25.0% |
| ! | GAAATATGATCATCTATCAA+AGG | - | chr3.3:83145300-83145319 | MS.gene37922:CDS | 25.0% |
| ! | GCATTCCTATGAAAAATATT+GGG | - | chr3.3:83145696-83145715 | MS.gene37922:intron | 25.0% |
| ! | TAACAAAAGGATGAAAGAAT+TGG | - | chr3.3:83146305-83146324 | MS.gene37922:CDS | 25.0% |
| ! | TACAAATTTGAAAACCTTAG+AGG | - | chr3.3:83145934-83145953 | MS.gene37922:CDS | 25.0% |
| ! | TACCTCTTTCAACTTATTTA+GGG | + | chr3.3:83145857-83145876 | None:intergenic | 25.0% |
| ! | TCTCTCAAATGTCTAAATAT+TGG | + | chr3.3:83147718-83147737 | None:intergenic | 25.0% |
| ! | TGAAAGAGAAAAGATTATGT+TGG | - | chr3.3:83146812-83146831 | MS.gene37922:CDS | 25.0% |
| ! | TTCCATGGAATTAATGATAA+TGG | + | chr3.3:83144781-83144800 | None:intergenic | 25.0% |
| ! | TTGAATCAGATGTTTGTAAA+TGG | - | chr3.3:83146783-83146802 | MS.gene37922:CDS | 25.0% |
| ! | TTTAATCTTGAACATCTTTC+AGG | - | chr3.3:83146414-83146433 | MS.gene37922:CDS | 25.0% |
| !! | ATTTCTTTTCTAACAGTGAA+AGG | + | chr3.3:83147504-83147523 | None:intergenic | 25.0% |
| !! | CATTTGTTTAATTGATTCCA+TGG | + | chr3.3:83144796-83144815 | None:intergenic | 25.0% |
| !! | GTTTTTCTGTTTGGTTATTA+GGG | + | chr3.3:83145441-83145460 | None:intergenic | 25.0% |
| !! | TGTTTTTCTGTTTGGTTATT+AGG | + | chr3.3:83145442-83145461 | None:intergenic | 25.0% |
| !! | TTTCTTTTCTAACAGTGAAA+GGG | + | chr3.3:83147503-83147522 | None:intergenic | 25.0% |
| !!! | AATATTGATTTTAGGACTGA+AGG | - | chr3.3:83146651-83146670 | MS.gene37922:CDS | 25.0% |
| !!! | ACCATTTGAGTTGTATTTTA+CGG | - | chr3.3:83144897-83144916 | MS.gene37922:CDS | 25.0% |
| AAACCTGAACATTGAATTGT+TGG | + | chr3.3:83145583-83145602 | None:intergenic | 30.0% | |
| AAACTGAGAAAGAGTTTGTA+AGG | - | chr3.3:83145662-83145681 | MS.gene37922:intron | 30.0% | |
| AAGAACTATAACGATGTAAC+GGG | - | chr3.3:83146855-83146874 | MS.gene37922:CDS | 30.0% | |
| AAGAGAAAAGATTATGTTGG+AGG | - | chr3.3:83146815-83146834 | MS.gene37922:CDS | 30.0% | |
| AATCCAACAATTCAATGTTC+AGG | - | chr3.3:83145577-83145596 | MS.gene37922:CDS | 30.0% | |
| AGATGATAAGTCTAGATTGA+AGG | - | chr3.3:83146626-83146645 | MS.gene37922:CDS | 30.0% | |
| ATGTAGCAAAAAACATACCT+TGG | + | chr3.3:83144707-83144726 | None:intergenic | 30.0% | |
| CATGAAACAAGAAATCAACA+AGG | - | chr3.3:83147924-83147943 | MS.gene37922:intron | 30.0% | |
| CTCTCAACAAAAATGTTGAA+AGG | - | chr3.3:83146352-83146371 | MS.gene37922:CDS | 30.0% | |
| CTTGTTAAAGTCAACTAAGT+AGG | - | chr3.3:83147121-83147140 | MS.gene37922:CDS | 30.0% | |
| GAAAAATGTGAAACTAGATG+AGG | - | chr3.3:83146443-83146462 | MS.gene37922:CDS | 30.0% | |
| GAAATTGAAGACAAAGTTAC+AGG | - | chr3.3:83145718-83145737 | MS.gene37922:intron | 30.0% | |
| GAAGAACTATAACGATGTAA+CGG | - | chr3.3:83146854-83146873 | MS.gene37922:CDS | 30.0% | |
| GATATGCTTGAACATGATAT+AGG | - | chr3.3:83146045-83146064 | MS.gene37922:CDS | 30.0% | |
| GTACCTCTTTCAACTTATTT+AGG | + | chr3.3:83145858-83145877 | None:intergenic | 30.0% | |
| TAAAGTTGAATCACTTGATC+TGG | - | chr3.3:83146731-83146750 | MS.gene37922:CDS | 30.0% | |
| TAATGCTCTATATGCTCTAA+AGG | + | chr3.3:83145275-83145294 | None:intergenic | 30.0% | |
| TCAGGACAAAACAATCAAAA+TGG | - | chr3.3:83144667-83144686 | MS.gene37922:CDS | 30.0% | |
| TCCACAAAATTTATCAGTTC+TGG | + | chr3.3:83145247-83145266 | None:intergenic | 30.0% | |
| TCTATGTTGCTATCAAGAAA+AGG | - | chr3.3:83145514-83145533 | MS.gene37922:CDS | 30.0% | |
| TCTCATCATATCAAATGTTC+CGG | - | chr3.3:83144869-83144888 | MS.gene37922:CDS | 30.0% | |
| TGCTACATAACATTTCATCA+TGG | - | chr3.3:83144719-83144738 | MS.gene37922:CDS | 30.0% | |
| TTAAGTCCTGTAAAGATTGT+TGG | + | chr3.3:83147612-83147631 | None:intergenic | 30.0% | |
| ! | AACCCTAAATAAGTTGAAAG+AGG | - | chr3.3:83145852-83145871 | MS.gene37922:intron | 30.0% |
| ! | ACCAGAACTGATAAATTTTG+TGG | - | chr3.3:83145243-83145262 | MS.gene37922:CDS | 30.0% |
| ! | AGAATTTAGAATTCTGGTTG+AGG | - | chr3.3:83147554-83147573 | MS.gene37922:CDS | 30.0% |
| ! | CAAGCTTCAGAAAGAAATTT+TGG | - | chr3.3:83145633-83145652 | MS.gene37922:intron | 30.0% |
| ! | CATTTTTGAATTGGCACTTA+AGG | - | chr3.3:83146914-83146933 | MS.gene37922:CDS | 30.0% |
| ! | GAAGGTTTGAGTTATGTAAA+AGG | - | chr3.3:83147964-83147983 | MS.gene37922:intron | 30.0% |
| ! | TAAGGTTGTTAGTTTGGAAA+CGG | - | chr3.3:83146164-83146183 | MS.gene37922:CDS | 30.0% |
| ! | TCGAAACAGCATTTTTGAAT+TGG | - | chr3.3:83146905-83146924 | MS.gene37922:CDS | 30.0% |
| ! | TTGAGGAGAATTTAGAATTC+TGG | - | chr3.3:83147548-83147567 | MS.gene37922:CDS | 30.0% |
| ! | TTTCTTGATAGCAACATAGA+AGG | + | chr3.3:83145514-83145533 | None:intergenic | 30.0% |
| !! | CCTTTGAGATCTTTCTTATT+CGG | - | chr3.3:83148081-83148100 | MS.gene37922:intron | 30.0% |
| !! | GAATCAAGTTGAAGAAACAA+AGG | - | chr3.3:83148103-83148122 | MS.gene37922:intron | 30.0% |
| !! | TGTTGCATTGTTTTTCTGTT+TGG | + | chr3.3:83145450-83145469 | None:intergenic | 30.0% |
| !! | TGTTTTTCAAAATCCTCACT+TGG | + | chr3.3:83146519-83146538 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTGACGATGAATC+TGG | + | chr3.3:83147856-83147875 | None:intergenic | 30.0% |
| !!! | CCATTTGAGTTGTATTTTAC+GGG | - | chr3.3:83144898-83144917 | MS.gene37922:CDS | 30.0% |
| !!! | TGGAAAGACAAGATTTTTTG+TGG | - | chr3.3:83147447-83147466 | MS.gene37922:CDS | 30.0% |
| AAATTCCGCTTCGAAATTGA+TGG | - | chr3.3:83147520-83147539 | MS.gene37922:CDS | 35.0% | |
| AAGGATGAAAGAATTGGAAG+AGG | - | chr3.3:83146311-83146330 | MS.gene37922:CDS | 35.0% | |
| AATGTGAAACTAGATGAGGA+AGG | - | chr3.3:83146447-83146466 | MS.gene37922:CDS | 35.0% | |
| ACAAAGCTTAGAAGAGGATA+AGG | - | chr3.3:83146254-83146273 | MS.gene37922:CDS | 35.0% | |
| ACAACTCAAATGGTAAAAGC+CGG | + | chr3.3:83144891-83144910 | None:intergenic | 35.0% | |
| AGTTACTTCTCAGAATGGAT+TGG | - | chr3.3:83146188-83146207 | MS.gene37922:CDS | 35.0% | |
| ATCACTTGATCTGGAAACTA+AGG | - | chr3.3:83146740-83146759 | MS.gene37922:CDS | 35.0% | |
| ATGTGAAACTAGATGAGGAA+GGG | - | chr3.3:83146448-83146467 | MS.gene37922:CDS | 35.0% | |
| ATTATGCATATCTGCAGGTA+AGG | - | chr3.3:83147176-83147195 | MS.gene37922:CDS | 35.0% | |
| CATCTTCGTCTATTCTGTAA+TGG | + | chr3.3:83145375-83145394 | None:intergenic | 35.0% | |
| CCCGTAAAATACAACTCAAA+TGG | + | chr3.3:83144901-83144920 | None:intergenic | 35.0% | |
| CCGAATAAGAAAGATCTCAA+AGG | + | chr3.3:83148084-83148103 | None:intergenic | 35.0% | |
| GAAGAATTGAGTCAAGCAAT+GGG | - | chr3.3:83148015-83148034 | MS.gene37922:intron | 35.0% | |
| GAAGATCGTGCTGAAAATAT+CGG | - | chr3.3:83146588-83146607 | MS.gene37922:CDS | 35.0% | |
| GAAGTTCCAACAATCTTTAC+AGG | - | chr3.3:83147603-83147622 | MS.gene37922:CDS | 35.0% | |
| GACAAAACAATCAAAATGGC+TGG | - | chr3.3:83144671-83144690 | MS.gene37922:CDS | 35.0% | |
| GACTTCGAAAAACCTTCTTT+GGG | + | chr3.3:83145492-83145511 | None:intergenic | 35.0% | |
| GTACTAGCTATATCTGAAGA+TGG | + | chr3.3:83147367-83147386 | None:intergenic | 35.0% | |
| GTTTATCTCTTCATCCTTAG+TGG | + | chr3.3:83147221-83147240 | None:intergenic | 35.0% | |
| TAATTGAAGATAACGACGCA+CGG | - | chr3.3:83145791-83145810 | MS.gene37922:intron | 35.0% | |
| TACCAGTTCAGAAACAAATC+CGG | - | chr3.3:83147258-83147277 | MS.gene37922:CDS | 35.0% | |
| TATGCATTATGCATATCTGC+AGG | - | chr3.3:83147171-83147190 | MS.gene37922:CDS | 35.0% | |
| TCTGTTTGGTTATTAGGGTT+AGG | + | chr3.3:83145436-83145455 | None:intergenic | 35.0% | |
| TCTTGTAAGCTACACATTGA+TGG | + | chr3.3:83147811-83147830 | None:intergenic | 35.0% | |
| TGAAGAATTGAGTCAAGCAA+TGG | - | chr3.3:83148014-83148033 | MS.gene37922:intron | 35.0% | |
| TGTAGGTAAGGTTGTTAGTT+TGG | - | chr3.3:83146158-83146177 | MS.gene37922:CDS | 35.0% | |
| TTATGCATATCTGCAGGTAA+GGG | - | chr3.3:83147177-83147196 | MS.gene37922:CDS | 35.0% | |
| TTATTAGGGTTAGGAGGTAA+TGG | + | chr3.3:83145427-83145446 | None:intergenic | 35.0% | |
| TTCTAATGGAAAACCAAGTG+AGG | - | chr3.3:83146503-83146522 | MS.gene37922:CDS | 35.0% | |
| TTTACATGAATTTAACGCCG+TGG | + | chr3.3:83145830-83145849 | None:intergenic | 35.0% | |
| TTTCTAACAGTGAAAGGGAA+TGG | + | chr3.3:83147498-83147517 | None:intergenic | 35.0% | |
| TTTGATATGATGAGAGACAC+AGG | + | chr3.3:83144864-83144883 | None:intergenic | 35.0% | |
| ! | AATGAACCTCCTTAACCTTT+TGG | + | chr3.3:83145915-83145934 | None:intergenic | 35.0% |
| ! | AGAAGCATACCAAAAGGTTA+AGG | - | chr3.3:83145903-83145922 | MS.gene37922:CDS | 35.0% |
| ! | ATGGACTTGTTCAGGAAAAA+CGG | + | chr3.3:83145356-83145375 | None:intergenic | 35.0% |
| ! | TCAATGTTCAGGTTTGAGTA+AGG | - | chr3.3:83145588-83145607 | MS.gene37922:CDS | 35.0% |
| ! | TTCCTGTGTTTTCAACATGT+TGG | + | chr3.3:83147408-83147427 | None:intergenic | 35.0% |
| !! | AAAACCTTCTTTGGGATACT+TGG | + | chr3.3:83145484-83145503 | None:intergenic | 35.0% |
| !! | AGAACACAATGAAGTATTGC+AGG | - | chr3.3:83147765-83147784 | MS.gene37922:intron | 35.0% |
| !! | ATTCTGTAATGGACTTGTTC+AGG | + | chr3.3:83145364-83145383 | None:intergenic | 35.0% |
| !! | CTTCATGAAAGTGTGTTTTG+AGG | + | chr3.3:83146389-83146408 | None:intergenic | 35.0% |
| !! | GAGGTAATGGATTAGTTTCA+GGG | + | chr3.3:83145414-83145433 | None:intergenic | 35.0% |
| !! | GTTTCTAGTGAACTACAAGA+AGG | - | chr3.3:83147946-83147965 | MS.gene37922:intron | 35.0% |
| !! | TTGATTGTTTTGTCCTGATG+TGG | + | chr3.3:83144665-83144684 | None:intergenic | 35.0% |
| AAAGAGCGGAAATGTACTAC+AGG | - | chr3.3:83145215-83145234 | MS.gene37922:CDS | 40.0% | |
| AACAGATATGGAGGAGATAG+TGG | - | chr3.3:83145147-83145166 | MS.gene37922:CDS | 40.0% | |
| AATTGAAGATAACGACGCAC+GGG | - | chr3.3:83145792-83145811 | MS.gene37922:intron | 40.0% | |
| ACTTGATCTGGAAACTAAGG+AGG | - | chr3.3:83146743-83146762 | MS.gene37922:CDS | 40.0% | |
| AGCAATCGTGAATGATGCTA+AGG | - | chr3.3:83146566-83146585 | MS.gene37922:CDS | 40.0% | |
| AGCATACCAAAAGGTTAAGG+AGG | - | chr3.3:83145906-83145925 | MS.gene37922:CDS | 40.0% | |
| ATATAGGCATGTTGCAAGAG+AGG | - | chr3.3:83146061-83146080 | MS.gene37922:CDS | 40.0% | |
| CAACCAATGCATATTCATGG+TGG | - | chr3.3:83144631-83144650 | MS.gene37922:CDS | 40.0% | |
| CAATGCATATTCATGGTGGT+GGG | - | chr3.3:83144635-83144654 | MS.gene37922:CDS | 40.0% | |
| CACCAACATGTTGAAAACAC+AGG | - | chr3.3:83147403-83147422 | MS.gene37922:CDS | 40.0% | |
| CAGCAACCAATGCATATTCA+TGG | - | chr3.3:83144628-83144647 | MS.gene37922:CDS | 40.0% | |
| CATCAAGCTGCAAAGTTTCA+AGG | - | chr3.3:83147889-83147908 | MS.gene37922:intron | 40.0% | |
| CATGTTGCAAGAGAGGATTA+AGG | - | chr3.3:83146068-83146087 | MS.gene37922:CDS | 40.0% | |
| CTTTCCAAGCAAACGAATCA+GGG | - | chr3.3:83145964-83145983 | MS.gene37922:CDS | 40.0% | |
| GAAAAGCTTGAGGAAGATTC+GGG | - | chr3.3:83146090-83146109 | MS.gene37922:CDS | 40.0% | |
| GAAGAATGTAGTTGCCACTA+AGG | - | chr3.3:83147204-83147223 | MS.gene37922:CDS | 40.0% | |
| GAGGATTAAGGAAAAGCTTG+AGG | - | chr3.3:83146080-83146099 | MS.gene37922:CDS | 40.0% | |
| GCAAACCATCAATTTCGAAG+CGG | + | chr3.3:83147528-83147547 | None:intergenic | 40.0% | |
| GGAAAAGCTTGAGGAAGATT+CGG | - | chr3.3:83146089-83146108 | MS.gene37922:CDS | 40.0% | |
| GGACTTCGAAAAACCTTCTT+TGG | + | chr3.3:83145493-83145512 | None:intergenic | 40.0% | |
| GTTTGGTTATTAGGGTTAGG+AGG | + | chr3.3:83145433-83145452 | None:intergenic | 40.0% | |
| TGGAAAGGAAGTTACCTCTA+AGG | + | chr3.3:83145951-83145970 | None:intergenic | 40.0% | |
| TGTGAAACTAGATGAGGAAG+GGG | - | chr3.3:83146449-83146468 | MS.gene37922:CDS | 40.0% | |
| TGTGCAAGATCTAACACAAC+AGG | - | chr3.3:83146674-83146693 | MS.gene37922:CDS | 40.0% | |
| TTGGGATACTTGGAGGTTTA+GGG | + | chr3.3:83145474-83145493 | None:intergenic | 40.0% | |
| ! | AGCTAGAGAAGCATACCAAA+AGG | - | chr3.3:83145897-83145916 | MS.gene37922:CDS | 40.0% |
| ! | TTTGGGATACTTGGAGGTTT+AGG | + | chr3.3:83145475-83145494 | None:intergenic | 40.0% |
| !! | ACATAGAAGAAGTGTCAGCT+CGG | - | chr3.3:83145540-83145559 | MS.gene37922:CDS | 40.0% |
| !! | ATCCGGATTTGTTTCTGAAC+TGG | + | chr3.3:83147263-83147282 | None:intergenic | 40.0% |
| !! | CGAAATTGATGGTTTGCTTG+AGG | - | chr3.3:83147531-83147550 | MS.gene37922:CDS | 40.0% |
| !! | GGAGGTAATGGATTAGTTTC+AGG | + | chr3.3:83145415-83145434 | None:intergenic | 40.0% |
| ACCTCCAAGTATCCCAAAGA+AGG | - | chr3.3:83145477-83145496 | MS.gene37922:CDS | 45.0% | |
| ACGGCAGTTACTTCTCAGAA+TGG | - | chr3.3:83146183-83146202 | MS.gene37922:CDS | 45.0% | |
| AGATGAGGAAGGGGAGAATT+TGG | - | chr3.3:83146458-83146477 | MS.gene37922:CDS | 45.0% | |
| CCAATGCATATTCATGGTGG+TGG | - | chr3.3:83144634-83144653 | MS.gene37922:CDS | 45.0% | |
| CCACCACCATGAATATGCAT+TGG | + | chr3.3:83144637-83144656 | None:intergenic | 45.0% | |
| CCTTTCCAAGCAAACGAATC+AGG | - | chr3.3:83145963-83145982 | MS.gene37922:CDS | 45.0% | |
| CTGTATTGTCTCTGTAGTGC+TGG | + | chr3.3:83148153-83148172 | None:intergenic | 45.0% | |
| GAAAAACGGTGGCAATTGTG+CGG | + | chr3.3:83145342-83145361 | None:intergenic | 45.0% | |
| GAGATGATCGATGAGCTTGT+AGG | - | chr3.3:83146141-83146160 | MS.gene37922:CDS | 45.0% | |
| GATCGATGAGCTTGTAGGTA+AGG | - | chr3.3:83146146-83146165 | MS.gene37922:CDS | 45.0% | |
| GGACTCATTTGCTCAAAGAG+CGG | - | chr3.3:83145201-83145220 | MS.gene37922:CDS | 45.0% | |
| GGTACAATCACGATCATCTG+AGG | - | chr3.3:83145873-83145892 | MS.gene37922:intron | 45.0% | |
| GTTCAAGGAGATAACAGGGA+GGG | - | chr3.3:83147331-83147350 | MS.gene37922:CDS | 45.0% | |
| ! | ATCTCCCTGATTCGTTTGCT+TGG | + | chr3.3:83145971-83145990 | None:intergenic | 45.0% |
| ! | CCTGATTCGTTTGCTTGGAA+AGG | + | chr3.3:83145966-83145985 | None:intergenic | 45.0% |
| ! | GACTTGTTCAGGAAAAACGG+TGG | + | chr3.3:83145353-83145372 | None:intergenic | 45.0% |
| !! | ACCTTCTTTGGGATACTTGG+AGG | + | chr3.3:83145481-83145500 | None:intergenic | 45.0% |
| !! | ATCTCAAAGGCATTCTAGCG+CGG | + | chr3.3:83148071-83148090 | None:intergenic | 45.0% |
| AACGGGCAAGCTCAACAATG+TGG | - | chr3.3:83146872-83146891 | MS.gene37922:CDS | 50.0% | |
| ACGCGGTTCAAGGAGATAAC+AGG | - | chr3.3:83147326-83147345 | MS.gene37922:CDS | 50.0% | |
| CCTCTTGAAAACGCGGTTCA+AGG | - | chr3.3:83147316-83147335 | MS.gene37922:CDS | 50.0% | |
| CGCGGTTCAAGGAGATAACA+GGG | - | chr3.3:83147327-83147346 | MS.gene37922:CDS | 50.0% | |
| GGTTCAAGGAGATAACAGGG+AGG | - | chr3.3:83147330-83147349 | MS.gene37922:CDS | 50.0% | |
| TGGCTGGAACAAAGTCTCCA+AGG | - | chr3.3:83144687-83144706 | MS.gene37922:CDS | 50.0% | |
| ! | TAACGACGCACGGGCTTTAA+TGG | - | chr3.3:83145801-83145820 | MS.gene37922:intron | 50.0% |
| ! | TATGGAGGAGATAGTGGCTG+AGG | - | chr3.3:83145153-83145172 | MS.gene37922:CDS | 50.0% |
| !! | AGAAGCGCCTCTTGAAAACG+CGG | - | chr3.3:83147309-83147328 | MS.gene37922:CDS | 50.0% |
| !! | CCTTGAACCGCGTTTTCAAG+AGG | + | chr3.3:83147319-83147338 | None:intergenic | 50.0% |
| AGGCGCTTCTTCGACTAGAG+TGG | + | chr3.3:83147299-83147318 | None:intergenic | 55.0% | |
| GTGGTGCGAGGACTTTCATC+CGG | + | chr3.3:83147280-83147299 | None:intergenic | 55.0% | |
| TCTTCGACTAGAGTGGTGCG+AGG | + | chr3.3:83147292-83147311 | None:intergenic | 55.0% | |
| ! | ACGGGCTTTAATGGCAGCCA+CGG | - | chr3.3:83145810-83145829 | MS.gene37922:intron | 55.0% |
| AGGCATTCTAGCGCGGCTTG+TGG | + | chr3.3:83148064-83148083 | None:intergenic | 60.0% | |
| !! | GGTGGTGGGTTAGCCACATC+AGG | - | chr3.3:83144649-83144668 | MS.gene37922:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 83144615 | 83148206 | 83144615 | ID=MS.gene37922 |
| chr3.3 | mRNA | 83144615 | 83148206 | 83144615 | ID=MS.gene37922.t1;Parent=MS.gene37922 |
| chr3.3 | exon | 83148113 | 83148206 | 83148113 | ID=MS.gene37922.t1.exon1;Parent=MS.gene37922.t1 |
| chr3.3 | CDS | 83148113 | 83148206 | 83148113 | ID=cds.MS.gene37922.t1;Parent=MS.gene37922.t1 |
| chr3.3 | exon | 83145886 | 83147669 | 83145886 | ID=MS.gene37922.t1.exon2;Parent=MS.gene37922.t1 |
| chr3.3 | CDS | 83145886 | 83147669 | 83145886 | ID=cds.MS.gene37922.t1;Parent=MS.gene37922.t1 |
| chr3.3 | exon | 83144615 | 83145628 | 83144615 | ID=MS.gene37922.t1.exon3;Parent=MS.gene37922.t1 |
| chr3.3 | CDS | 83144615 | 83145628 | 83144615 | ID=cds.MS.gene37922.t1;Parent=MS.gene37922.t1 |
| Gene Sequence |
| Protein sequence |
