Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38440.t1 | XP_013460445.1 | 81 | 653 | 68 | 4 | 1 | 641 | 1 | 609 | 3.30E-259 | 904.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38440.t1 | A0A072UZD4 | 81.0 | 653 | 68 | 4 | 1 | 641 | 1 | 609 | 2.4e-259 | 904.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051594 | MS.gene38440 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene38440 | 0.820823 | 5.60E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene38440 | 0.835342 | 1.77E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene38440 | 0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene38440 | 0.803711 | 3.06E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38440.t1 | MTR_3g467090 | 84.146 | 656 | 42 | 5 | 1 | 641 | 1 | 609 | 0.0 | 1027 |
| MS.gene38440.t1 | MTR_3g117790 | 29.880 | 251 | 110 | 7 | 419 | 641 | 210 | 422 | 6.73e-17 | 84.3 |
| MS.gene38440.t1 | MTR_3g117790 | 33.679 | 193 | 111 | 7 | 8 | 185 | 6 | 196 | 2.81e-12 | 69.7 |
| MS.gene38440.t1 | MTR_3g116690 | 28.287 | 251 | 114 | 6 | 419 | 641 | 210 | 422 | 1.16e-14 | 77.4 |
| MS.gene38440.t1 | MTR_3g116690 | 33.679 | 193 | 111 | 7 | 8 | 185 | 6 | 196 | 2.03e-12 | 70.5 |
| MS.gene38440.t1 | MTR_3g117790 | 31.839 | 223 | 133 | 6 | 419 | 641 | 210 | 413 | 1.87e-14 | 76.6 |
| MS.gene38440.t1 | MTR_3g117790 | 33.679 | 193 | 111 | 7 | 8 | 185 | 6 | 196 | 2.57e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38440.t1 | AT1G15720 | 30.159 | 189 | 121 | 5 | 3 | 182 | 2 | 188 | 3.33e-14 | 75.5 |
| MS.gene38440.t1 | AT5G58340 | 29.167 | 192 | 125 | 4 | 3 | 185 | 2 | 191 | 1.64e-12 | 70.9 |
| MS.gene38440.t1 | AT5G58340 | 29.167 | 192 | 125 | 4 | 3 | 185 | 2 | 191 | 1.64e-12 | 70.9 |
Find 219 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCAAAGAACTTGATTTA+AGG | 0.142750 | 3.4:-63332233 | None:intergenic |
| AACATATATCTGAAGCTTTA+TGG | 0.165268 | 3.4:+63334894 | MS.gene38440:CDS |
| GTCCCTTAAATCAAGTTCTT+TGG | 0.242870 | 3.4:+63332230 | MS.gene38440:CDS |
| AGAAGGTTGTTAGAAGGTTT+GGG | 0.274634 | 3.4:+63329621 | MS.gene38440:CDS |
| AAGGTGCGCTTTGGGATGTT+AGG | 0.293183 | 3.4:+63329421 | MS.gene38440:CDS |
| TGATGGGAGGTTAGAAGGTT+TGG | 0.294386 | 3.4:+63331167 | MS.gene38440:CDS |
| CTCCAAAGAACTTGATTTAA+GGG | 0.304386 | 3.4:-63332232 | None:intergenic |
| AAGCGTGATGGGAGGTTAGA+AGG | 0.309015 | 3.4:+63331162 | MS.gene38440:CDS |
| TAGAAGGTTGTTAGAAGGTT+TGG | 0.315126 | 3.4:+63329620 | MS.gene38440:CDS |
| AATGGGAGAGTAGAAGGTTT+AGG | 0.318960 | 3.4:+63329870 | MS.gene38440:CDS |
| AGCCATTCTCTTCCAATTGC+CGG | 0.324209 | 3.4:-63329821 | None:intergenic |
| TGTCGGATGGGTTTGTGCGG+TGG | 0.333320 | 3.4:+63329385 | MS.gene38440:CDS |
| CGGATGGGTTTGTGCGGTGG+GGG | 0.333508 | 3.4:+63329388 | MS.gene38440:CDS |
| AGGCGTAATGGGAGAGTAGA+AGG | 0.337405 | 3.4:+63329864 | MS.gene38440:CDS |
| AGAAGGTTGTTAGAAGGATT+GGG | 0.339149 | 3.4:+63329756 | MS.gene38440:CDS |
| AAACATCTCAAACTGGATAA+TGG | 0.339343 | 3.4:+63329011 | MS.gene38440:CDS |
| GGGAGTAGAAGGTTGTTAGA+AGG | 0.341083 | 3.4:+63329750 | MS.gene38440:CDS |
| TTTCGGCGGTGAAGAGGATT+TGG | 0.346079 | 3.4:+63329337 | MS.gene38440:CDS |
| TGGAGGGGAAGGAGAGGGAG+TGG | 0.346595 | 3.4:+63329357 | MS.gene38440:CDS |
| TAGAAGGTTGTTAGAAGGAT+TGG | 0.352149 | 3.4:+63329755 | MS.gene38440:CDS |
| TGTTAGAAGGTTTGGGGAAA+GGG | 0.353346 | 3.4:+63329628 | MS.gene38440:CDS |
| TACTTCTGTTGATGCGAATC+AGG | 0.354114 | 3.4:+63330007 | MS.gene38440:CDS |
| ATGGGAGAGTAGAAGGTTTA+GGG | 0.354705 | 3.4:+63329871 | MS.gene38440:CDS |
| GTCGGATGGGTTTGTGCGGT+GGG | 0.357265 | 3.4:+63329386 | MS.gene38440:CDS |
| GGGAGTAGAAGGTTGTTAGA+AGG | 0.363398 | 3.4:+63329615 | MS.gene38440:CDS |
| AGACAAGAATGCAGATATAA+AGG | 0.364517 | 3.4:-63334806 | None:intergenic |
| GATGGGAGGTTAGAAGGTTT+GGG | 0.367747 | 3.4:+63331168 | MS.gene38440:CDS |
| CTTGCCCGTCGCATTAAGTT+GGG | 0.371138 | 3.4:-63332525 | None:intergenic |
| TTGTTTCTCCAATAGAAATT+CGG | 0.371218 | 3.4:+63332058 | MS.gene38440:intron |
| GCAGGTTTGGAGAAGGAAAC+TGG | 0.377930 | 3.4:+63333299 | MS.gene38440:intron |
| TGTAGCCAATTTGGATCTTA+CGG | 0.379477 | 3.4:-63332307 | None:intergenic |
| TGAAGCCGTAAGATCCAAAT+TGG | 0.381380 | 3.4:+63332302 | MS.gene38440:CDS |
| AGAGATTGAAGGTGCGCTTT+GGG | 0.383115 | 3.4:+63329413 | MS.gene38440:CDS |
| AGGGTTGCAGAGAGGTTGGT+GGG | 0.383275 | 3.4:+63329441 | MS.gene38440:CDS |
| TTTCTATCACGAATGCGTTT+CGG | 0.384690 | 3.4:+63329235 | MS.gene38440:CDS |
| CGGAGAGTGGAAGTAGGGTT+AGG | 0.385447 | 3.4:-63329083 | None:intergenic |
| GGGAGTGGGTTGGTGTCGGA+TGG | 0.390596 | 3.4:+63329372 | MS.gene38440:CDS |
| GTCAGCCAAGAAGGAAGAAA+AGG | 0.392804 | 3.4:+63333097 | MS.gene38440:CDS |
| TGTTAGGGTTGCAGAGAGGT+TGG | 0.393283 | 3.4:+63329437 | MS.gene38440:CDS |
| AAGAGATTGAAGGTGCGCTT+TGG | 0.396331 | 3.4:+63329412 | MS.gene38440:CDS |
| CATTCTTGTCTCAAGGGCTC+AGG | 0.396527 | 3.4:+63334818 | MS.gene38440:CDS |
| ATCTGAAGCTTTATGGCTGT+TGG | 0.400942 | 3.4:+63334901 | MS.gene38440:CDS |
| GAAGGGGAATGGTTTGTGTC+CGG | 0.405618 | 3.4:+63329566 | MS.gene38440:CDS |
| GTGGATTCTAACATGGACTT+TGG | 0.410867 | 3.4:-63334770 | None:intergenic |
| GAATGTCGAGGAGGCGTAAT+GGG | 0.411679 | 3.4:+63329853 | MS.gene38440:CDS |
| CAAGATGTTCGAGGATTTGA+AGG | 0.416839 | 3.4:-63329188 | None:intergenic |
| ATATCTGCATTCTTGTCTCA+AGG | 0.420947 | 3.4:+63334811 | MS.gene38440:CDS |
| CGACGATCATTACTATAGTT+GGG | 0.429090 | 3.4:-63332501 | None:intergenic |
| ACCTCTGGAATGAGAGATAA+AGG | 0.429332 | 3.4:+63331312 | MS.gene38440:CDS |
| TCGGATGGGTTTGTGCGGTG+GGG | 0.432036 | 3.4:+63329387 | MS.gene38440:CDS |
| GCGACGATCATTACTATAGT+TGG | 0.433098 | 3.4:-63332502 | None:intergenic |
| GATCGGGAACGGTGGTGTTA+CGG | 0.434808 | 3.4:-63329044 | None:intergenic |
| ATGCTGCTGAGGGGAGTAGA+AGG | 0.436345 | 3.4:+63329604 | MS.gene38440:CDS |
| ATGCTGCTGAGGGGAGTAGA+AGG | 0.436345 | 3.4:+63329739 | MS.gene38440:CDS |
| GGTTGGTGGGGTTGAATACA+AGG | 0.441539 | 3.4:+63329454 | MS.gene38440:CDS |
| GGATGGGTTTGTGCGGTGGG+GGG | 0.441794 | 3.4:+63329389 | MS.gene38440:CDS |
| TGGATTCTAACATGGACTTT+GGG | 0.442952 | 3.4:-63334769 | None:intergenic |
| AAGGGGAATGGTTTGTGTCC+GGG | 0.445060 | 3.4:+63329567 | MS.gene38440:CDS |
| AGATTGAAGCGTTGAGGATG+TGG | 0.446039 | 3.4:-63329155 | None:intergenic |
| AAATCATGGTAACCGGCAAT+TGG | 0.446442 | 3.4:+63329809 | MS.gene38440:CDS |
| AGGATTTGGAGGGGAAGGAG+AGG | 0.449026 | 3.4:+63329351 | MS.gene38440:CDS |
| TCAGATGTGTGCAATGCATC+AGG | 0.450692 | 3.4:-63332282 | None:intergenic |
| AGTGAGGTGGGAGGTCCAAC+TGG | 0.450696 | 3.4:+63334743 | MS.gene38440:CDS |
| GAAGAGAATGGCTCGGGTGG+TGG | 0.450981 | 3.4:+63329831 | MS.gene38440:CDS |
| ACTTGCCCGTCGCATTAAGT+TGG | 0.452491 | 3.4:-63332526 | None:intergenic |
| TGAACGAAAACATCTCAAAC+TGG | 0.454273 | 3.4:+63329004 | MS.gene38440:CDS |
| ATTGAAGAACGCGGAGGAGG+AGG | 0.455241 | 3.4:-63329131 | None:intergenic |
| AGAAATCTCCTTGGCAACAT+TGG | 0.455327 | 3.4:-63332433 | None:intergenic |
| GAATCATTATAAACTAGATT+CGG | 0.456341 | 3.4:-63334937 | None:intergenic |
| AAGGGGAATGGTTTGTGTCC+AGG | 0.458031 | 3.4:+63329702 | MS.gene38440:CDS |
| AAATCGTGGCAATGAACAAT+TGG | 0.458465 | 3.4:+63331275 | MS.gene38440:CDS |
| TAGGGTTGCAGAGAGGTTGG+TGG | 0.458519 | 3.4:+63329440 | MS.gene38440:CDS |
| GAAAAGGAAATGGACTTCCT+TGG | 0.461062 | 3.4:+63333113 | MS.gene38440:CDS |
| GGATTTGGAGGGGAAGGAGA+GGG | 0.461933 | 3.4:+63329352 | MS.gene38440:CDS |
| TGCTGATGTGAAGAAACTTC+GGG | 0.463279 | 3.4:+63332206 | MS.gene38440:CDS |
| AATGATAATGATAATGTTGA+TGG | 0.463337 | 3.4:+63331225 | MS.gene38440:CDS |
| TTCTTTGGAGCTAAAAGCAT+TGG | 0.464026 | 3.4:+63332245 | MS.gene38440:CDS |
| TTGGTGAAAATCATGGTAAC+CGG | 0.464556 | 3.4:+63329802 | MS.gene38440:CDS |
| AACATATTTGAATATAGAAA+TGG | 0.466093 | 3.4:+63333346 | MS.gene38440:CDS |
| TTGAATTAGGGGATCGGGAA+CGG | 0.467490 | 3.4:-63329055 | None:intergenic |
| TTGTTAGAAGGTTTGGGGAA+AGG | 0.469663 | 3.4:+63329627 | MS.gene38440:CDS |
| GGACGATGATGTAGCATTGA+TGG | 0.471228 | 3.4:+63331248 | MS.gene38440:CDS |
| GAAGCGATAGTTCGCACCTC+TGG | 0.476524 | 3.4:+63331297 | MS.gene38440:CDS |
| GGAGGGGAAGGAGAGGGAGT+GGG | 0.478128 | 3.4:+63329358 | MS.gene38440:CDS |
| AAGATTTGAGGAAGCGTGAT+GGG | 0.480627 | 3.4:+63331151 | MS.gene38440:CDS |
| TTGATAGCAGGTTCGAGCTA+TGG | 0.481170 | 3.4:+63334682 | MS.gene38440:intron |
| AAATCATGGCAATGATGAAT+CGG | 0.485766 | 3.4:+63329971 | MS.gene38440:CDS |
| GGAGTGGGTTGGTGTCGGAT+GGG | 0.486568 | 3.4:+63329373 | MS.gene38440:CDS |
| CGCAACAAAGTCAGCCAAGA+AGG | 0.491405 | 3.4:+63333088 | MS.gene38440:CDS |
| CACAAGGGAGTTAAACTCTC+TGG | 0.493055 | 3.4:+63332129 | MS.gene38440:CDS |
| TTGGCAACATTGGCATCATT+AGG | 0.495297 | 3.4:-63332423 | None:intergenic |
| TACTCACCAGACGGATCCTC+CGG | 0.496317 | 3.4:-63329312 | None:intergenic |
| ATGCGGTTGTTGAAGTGAAG+AGG | 0.497546 | 3.4:+63329481 | MS.gene38440:CDS |
| TATCTGCATTCTTGTCTCAA+GGG | 0.499196 | 3.4:+63334812 | MS.gene38440:CDS |
| TGCTGTTGCGGTTGAATGTA+CGG | 0.501252 | 3.4:+63329269 | MS.gene38440:CDS |
| CGTGAATCGGCGCCGGAGAG+TGG | 0.505542 | 3.4:-63329096 | None:intergenic |
| GAGAGGGAGTGGGTTGGTGT+CGG | 0.507948 | 3.4:+63329368 | MS.gene38440:CDS |
| TGAAGAGGATTTGGAGGGGA+AGG | 0.508482 | 3.4:+63329346 | MS.gene38440:CDS |
| GGAGAGTGGAAGTAGGGTTA+GGG | 0.509768 | 3.4:-63329082 | None:intergenic |
| CAAGAAGGAAGAAAAGGAAA+TGG | 0.510534 | 3.4:+63333103 | MS.gene38440:CDS |
| GAAGGTTGTTAGAAGGATTG+GGG | 0.511656 | 3.4:+63329757 | MS.gene38440:CDS |
| GATCTTCCTAACTGTAGTAA+TGG | 0.512568 | 3.4:+63332471 | MS.gene38440:CDS |
| GAACGGTGGTGTTACGGAGG+AGG | 0.514258 | 3.4:-63329038 | None:intergenic |
| TTGAAGAACGCGGAGGAGGA+GGG | 0.514833 | 3.4:-63329130 | None:intergenic |
| GCGATGGTTTCGAAGGGGAA+TGG | 0.517229 | 3.4:+63329555 | MS.gene38440:CDS |
| GCGATGGTTTCGAAGGGGAA+TGG | 0.517229 | 3.4:+63329690 | MS.gene38440:CDS |
| GAAGTATTTGATTAATTCGC+CGG | 0.517468 | 3.4:+63329293 | MS.gene38440:CDS |
| TTCTTATGCAGGTTTGGAGA+AGG | 0.518405 | 3.4:+63333292 | MS.gene38440:intron |
| CTCAGGGCTCATCTTAACTA+AGG | 0.520436 | 3.4:+63334835 | MS.gene38440:CDS |
| CGGCGGTGAAGAGGATTTGG+AGG | 0.520447 | 3.4:+63329340 | MS.gene38440:CDS |
| ATTCTTGTCTCAAGGGCTCA+GGG | 0.521091 | 3.4:+63334819 | MS.gene38440:CDS |
| CGACTACCATTACTACAGTT+AGG | 0.521441 | 3.4:-63332477 | None:intergenic |
| ACCTCACTATCTGCACTAGT+TGG | 0.522315 | 3.4:-63334728 | None:intergenic |
| GTTTCTTGATTTGATTGCGA+TGG | 0.522727 | 3.4:+63329539 | MS.gene38440:CDS |
| ATATGTTGCTGTAAAAGTCT+AGG | 0.524611 | 3.4:-63333330 | None:intergenic |
| TTGCTGATGTGAAGAAACTT+CGG | 0.526628 | 3.4:+63332205 | MS.gene38440:CDS |
| CCTTGGAAGAAGAGACACTA+AGG | 0.527054 | 3.4:+63333130 | MS.gene38440:CDS |
| GGAATGTCGAGGAGGCGTAA+TGG | 0.533823 | 3.4:+63329852 | MS.gene38440:CDS |
| GTGTGCAATGCATCAGGAAG+AGG | 0.534240 | 3.4:-63332276 | None:intergenic |
| GGGATTGAAGAACGCGGAGG+AGG | 0.535565 | 3.4:-63329134 | None:intergenic |
| AGGTGCGCTTTGGGATGTTA+GGG | 0.535657 | 3.4:+63329422 | MS.gene38440:CDS |
| AATTCGCCGGAGGATCCGTC+TGG | 0.535840 | 3.4:+63329306 | MS.gene38440:CDS |
| TTTGAGACGTGAATCGGCGC+CGG | 0.540038 | 3.4:-63329103 | None:intergenic |
| GGGAAGGAGAGGGAGTGGGT+TGG | 0.540529 | 3.4:+63329362 | MS.gene38440:CDS |
| CCTTAGTGTCTCTTCTTCCA+AGG | 0.542109 | 3.4:-63333130 | None:intergenic |
| GATTGAAGCGTTGAGGATGT+GGG | 0.542160 | 3.4:-63329154 | None:intergenic |
| TAGTGATGATGAGATGATGA+TGG | 0.542742 | 3.4:+63329944 | MS.gene38440:CDS |
| AATGATGTTGGTGAAAATCA+TGG | 0.542892 | 3.4:+63329795 | MS.gene38440:CDS |
| TGTTGATGCGAATCAGGAAG+TGG | 0.544009 | 3.4:+63330013 | MS.gene38440:CDS |
| CTTCTTGGCTGACTTTGTTG+CGG | 0.549683 | 3.4:-63333087 | None:intergenic |
| ATGGACTTTGGGTTGCCAGT+TGG | 0.550504 | 3.4:-63334758 | None:intergenic |
| TCGCCCCAACTTAATGCGAC+GGG | 0.550818 | 3.4:+63332521 | MS.gene38440:CDS |
| CGGCGCCGGAGAGTGGAAGT+AGG | 0.551999 | 3.4:-63329089 | None:intergenic |
| GAGGATTTGAAGGGAGACTT+CGG | 0.552616 | 3.4:-63329178 | None:intergenic |
| AAATCTCTTCAAGATGTTCG+AGG | 0.553739 | 3.4:-63329197 | None:intergenic |
| TTATAAACTAGATTCGGAAA+AGG | 0.555894 | 3.4:-63334931 | None:intergenic |
| GAAGATTTGAGGAAGCGTGA+TGG | 0.556415 | 3.4:+63331150 | MS.gene38440:CDS |
| ACTAAGGTTAGACTAAATGC+AGG | 0.557338 | 3.4:+63334851 | MS.gene38440:CDS |
| GAAGGTTGTTAGAAGGTTTG+GGG | 0.557542 | 3.4:+63329622 | MS.gene38440:CDS |
| AAAGATTGCGATGGTTTCGA+AGG | 0.559220 | 3.4:+63329683 | MS.gene38440:CDS |
| TTGATTGCGATGGTTTCGAA+GGG | 0.559576 | 3.4:+63329549 | MS.gene38440:CDS |
| ATGCAGATATAAAGGAGAAG+TGG | 0.560386 | 3.4:-63334798 | None:intergenic |
| TTTGATTGCGATGGTTTCGA+AGG | 0.560926 | 3.4:+63329548 | MS.gene38440:CDS |
| ACAAGGAACAGAAATCTCCT+TGG | 0.563260 | 3.4:-63332442 | None:intergenic |
| AACCGGCAATTGGAAGAGAA+TGG | 0.567200 | 3.4:+63329819 | MS.gene38440:CDS |
| TAAAGGAGAAGTGGTTTGAG+TGG | 0.567303 | 3.4:-63334789 | None:intergenic |
| GGGTTGCAGAGAGGTTGGTG+GGG | 0.568853 | 3.4:+63329442 | MS.gene38440:CDS |
| GAGAAAGTGAATAATGATGT+TGG | 0.569773 | 3.4:+63329783 | MS.gene38440:CDS |
| CAGGAAGTGGAACAGCAAGC+TGG | 0.573349 | 3.4:+63330026 | MS.gene38440:CDS |
| ATGATAATGATAATGTTGAT+GGG | 0.578426 | 3.4:+63331226 | MS.gene38440:CDS |
| GCAATTGGAAGAGAATGGCT+CGG | 0.579023 | 3.4:+63329824 | MS.gene38440:CDS |
| CAATTGGAAGAGAATGGCTC+GGG | 0.580408 | 3.4:+63329825 | MS.gene38440:CDS |
| AAGGAGAAAATGAATGATGA+TGG | 0.580983 | 3.4:+63331192 | MS.gene38440:CDS |
| GAAGAAGAGACACTAAGGGC+TGG | 0.584293 | 3.4:+63333135 | MS.gene38440:CDS |
| GGCGCCGGAGAGTGGAAGTA+GGG | 0.585546 | 3.4:-63329088 | None:intergenic |
| GTCGCCCCAACTTAATGCGA+CGG | 0.587509 | 3.4:+63332520 | MS.gene38440:CDS |
| GGCGGTGAAGAGGATTTGGA+GGG | 0.588504 | 3.4:+63329341 | MS.gene38440:CDS |
| AAGATTGCGATGGTTTCGAA+GGG | 0.589044 | 3.4:+63329684 | MS.gene38440:CDS |
| TTGGAAGAGAATGGCTCGGG+TGG | 0.589660 | 3.4:+63329828 | MS.gene38440:CDS |
| GAGTGCTTACTGTGCTGTTG+CGG | 0.590232 | 3.4:+63329257 | MS.gene38440:CDS |
| GAATGATGATGATGTAGCAA+TGG | 0.591271 | 3.4:+63329656 | MS.gene38440:CDS |
| GATGAATCGGAAGAGAGAGT+TGG | 0.595938 | 3.4:+63329984 | MS.gene38440:CDS |
| GAAGAGATTTACCGCGACGA+CGG | 0.596500 | 3.4:+63329210 | MS.gene38440:CDS |
| ATTTGAGGAAGCGTGATGGG+AGG | 0.597213 | 3.4:+63331154 | MS.gene38440:CDS |
| GAGGTTAGAAGGTTTGGGAA+AGG | 0.597583 | 3.4:+63331173 | MS.gene38440:CDS |
| CTTCGGAGATTGAAGCGTTG+AGG | 0.600967 | 3.4:-63329161 | None:intergenic |
| CTACAAAAGATATGAATCGC+AGG | 0.602118 | 3.4:+63332325 | MS.gene38440:CDS |
| TTGCCCGTCGCATTAAGTTG+GGG | 0.602722 | 3.4:-63332524 | None:intergenic |
| GCTCGGGTGGTGGAATGTCG+AGG | 0.603376 | 3.4:+63329841 | MS.gene38440:CDS |
| TAATGATGCCAATGTTGCCA+AGG | 0.604037 | 3.4:+63332425 | MS.gene38440:CDS |
| AACTAGTGCAGATAGTGAGG+TGG | 0.605337 | 3.4:+63334730 | MS.gene38440:CDS |
| ACTAGTGCAGATAGTGAGGT+GGG | 0.608672 | 3.4:+63334731 | MS.gene38440:CDS |
| ACCTTTATCTCTCATTCCAG+AGG | 0.609794 | 3.4:-63331313 | None:intergenic |
| GGTTTGAGTGGATTCTAACA+TGG | 0.610413 | 3.4:-63334777 | None:intergenic |
| AATGATGATGATGTAGCAAT+GGG | 0.610427 | 3.4:+63329657 | MS.gene38440:CDS |
| TCCAACTAGTGCAGATAGTG+AGG | 0.610462 | 3.4:+63334727 | MS.gene38440:CDS |
| AGTTAAACTCTCTGGTGATG+AGG | 0.611191 | 3.4:+63332137 | MS.gene38440:CDS |
| CTAACCCTACTTCCACTCTC+CGG | 0.617416 | 3.4:+63329084 | MS.gene38440:CDS |
| AGTGATGATGAGATGATGAT+GGG | 0.618561 | 3.4:+63329945 | MS.gene38440:CDS |
| TGTTTGTGAAAATGCTGCTG+AGG | 0.619713 | 3.4:+63329593 | MS.gene38440:CDS |
| TGTTTGTGAAAATGCTGCTG+AGG | 0.619713 | 3.4:+63329728 | MS.gene38440:CDS |
| ATAGAAATTCGGAAAGACAA+TGG | 0.620587 | 3.4:+63332069 | MS.gene38440:intron |
| GACGATCATTACTATAGTTG+GGG | 0.624100 | 3.4:-63332500 | None:intergenic |
| GGTGTTTGTGAAATTGCTGA+AGG | 0.632383 | 3.4:+63331123 | MS.gene38440:intron |
| GTGTTTGTGAAATTGCTGAA+GGG | 0.634138 | 3.4:+63331124 | MS.gene38440:CDS |
| TGTTTGTGAAATTGCTGAAG+GGG | 0.634167 | 3.4:+63331125 | MS.gene38440:CDS |
| AATGGGTGAAAAGATTGCGA+TGG | 0.635009 | 3.4:+63329674 | MS.gene38440:CDS |
| ATGATGATGGGTGAAAATCA+TGG | 0.641026 | 3.4:+63329957 | MS.gene38440:CDS |
| AATTAGGGGATCGGGAACGG+TGG | 0.641310 | 3.4:-63329052 | None:intergenic |
| CGGGAACGGTGGTGTTACGG+AGG | 0.642164 | 3.4:-63329041 | None:intergenic |
| TGGTGTCGGATGGGTTTGTG+CGG | 0.644277 | 3.4:+63329382 | MS.gene38440:CDS |
| AAGATGTTCGAGGATTTGAA+GGG | 0.644288 | 3.4:-63329187 | None:intergenic |
| CTTGGAAGAAGAGACACTAA+GGG | 0.646858 | 3.4:+63333131 | MS.gene38440:CDS |
| TTAGGAAGATCACTACTACA+AGG | 0.647851 | 3.4:-63332459 | None:intergenic |
| GTTTGTGAAAATGCTGCTGA+GGG | 0.652459 | 3.4:+63329594 | MS.gene38440:CDS |
| GTTTGTGAAAATGCTGCTGA+GGG | 0.652459 | 3.4:+63329729 | MS.gene38440:CDS |
| AAAATGAATGATGATGAGAA+TGG | 0.653698 | 3.4:+63329900 | MS.gene38440:CDS |
| TGATAGAAACTCCGTCGTCG+CGG | 0.654431 | 3.4:-63329221 | None:intergenic |
| TGATAATGATAATGTTGATG+GGG | 0.658198 | 3.4:+63331227 | MS.gene38440:CDS |
| TCTCTGGTGATGAGGAAGCG+AGG | 0.659290 | 3.4:+63332145 | MS.gene38440:CDS |
| GATGATGTAGCATTGATGGA+TGG | 0.661125 | 3.4:+63331252 | MS.gene38440:CDS |
| CGGGTGGTGGAATGTCGAGG+AGG | 0.661807 | 3.4:+63329844 | MS.gene38440:CDS |
| GGGAATGGTTTGTGTCCGGG+AGG | 0.663088 | 3.4:+63329570 | MS.gene38440:CDS |
| GTATTTGATTAATTCGCCGG+AGG | 0.663609 | 3.4:+63329296 | MS.gene38440:CDS |
| TGATTGCGATGGTTTCGAAG+GGG | 0.666531 | 3.4:+63329550 | MS.gene38440:CDS |
| GGGATGTTAGGGTTGCAGAG+AGG | 0.669917 | 3.4:+63329433 | MS.gene38440:CDS |
| GTTTGTGAAATTGCTGAAGG+GGG | 0.671919 | 3.4:+63331126 | MS.gene38440:CDS |
| GGGAATGGTTTGTGTCCAGG+AGG | 0.689836 | 3.4:+63329705 | MS.gene38440:CDS |
| GTTGAATACAAGGAGAGATG+CGG | 0.690966 | 3.4:+63329464 | MS.gene38440:CDS |
| AGATTGCGATGGTTTCGAAG+GGG | 0.701674 | 3.4:+63329685 | MS.gene38440:CDS |
| AAGTCATGCTCAGACATACG+AGG | 0.723798 | 3.4:+63332545 | MS.gene38440:CDS |
| AGTGCAGATAGTGAGGTGGG+AGG | 0.727389 | 3.4:+63334734 | MS.gene38440:CDS |
| GCATTGATGGATGGAAATCG+TGG | 0.732089 | 3.4:+63331261 | MS.gene38440:CDS |
| GGATGTGGGATTGAAGAACG+CGG | 0.737594 | 3.4:-63329140 | None:intergenic |
| TGTGGGATTGAAGAACGCGG+AGG | 0.740314 | 3.4:-63329137 | None:intergenic |
| GCGGTGAAGAGGATTTGGAG+GGG | 0.745177 | 3.4:+63329342 | MS.gene38440:CDS |
| TTTGTGAAAATGCTGCTGAG+GGG | 0.761669 | 3.4:+63329595 | MS.gene38440:CDS |
| TTTGTGAAAATGCTGCTGAG+GGG | 0.761669 | 3.4:+63329730 | MS.gene38440:CDS |
| GGTTTGGAGAAGGAAACTGG+AGG | 0.780476 | 3.4:+63333302 | MS.gene38440:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATTTAAATTATAATTCT+CGG | + | chr3.4:63330184-63330203 | MS.gene38440:intron | 10.0% |
| !! | TTTAATCATTAAATTAAACT+AGG | + | chr3.4:63330943-63330962 | MS.gene38440:intron | 10.0% |
| !!! | ATGATTTAAATTGTTATTAT+TGG | + | chr3.4:63331444-63331463 | MS.gene38440:intron | 10.0% |
| !! | AAAATCATAATATATGAAAC+TGG | - | chr3.4:63333253-63333272 | None:intergenic | 15.0% |
| !! | AACATATTTGAATATAGAAA+TGG | + | chr3.4:63333346-63333365 | MS.gene38440:CDS | 15.0% |
| !! | AATGTAAATAACAATCAAAT+AGG | - | chr3.4:63332025-63332044 | None:intergenic | 15.0% |
| !! | TATTTAGTCGAAAAATTTAT+CGG | - | chr3.4:63332171-63332190 | None:intergenic | 15.0% |
| !! | TTCAAAATTTAAAAGTCTTA+GGG | - | chr3.4:63330554-63330573 | None:intergenic | 15.0% |
| !! | TTGGTTTAAAAAAAAAACAA+GGG | + | chr3.4:63330394-63330413 | MS.gene38440:intron | 15.0% |
| !!! | AATTGTTATTTTTGTAAGTT+TGG | + | chr3.4:63331478-63331497 | MS.gene38440:intron | 15.0% |
| !!! | AGGATATTAGAATTTTTATA+AGG | + | chr3.4:63331086-63331105 | MS.gene38440:intron | 15.0% |
| !!! | CACTTCAATTTTATTATTTA+AGG | + | chr3.4:63333429-63333448 | MS.gene38440:intron | 15.0% |
| !!! | GGATATTAGAATTTTTATAA+GGG | + | chr3.4:63331087-63331106 | MS.gene38440:intron | 15.0% |
| !!! | GTTTTTTATTATCATTTAGA+TGG | + | chr3.4:63332922-63332941 | MS.gene38440:intron | 15.0% |
| !!! | TAAAATTGAAGTGTTATAAA+CGG | - | chr3.4:63333422-63333441 | None:intergenic | 15.0% |
| !! | AATTGCATTTCTAATGTTTA+TGG | + | chr3.4:63333559-63333578 | MS.gene38440:intron | 20.0% |
| !! | AATTTCCTCAAAATAATACT+TGG | + | chr3.4:63331362-63331381 | MS.gene38440:intron | 20.0% |
| !! | ACTAAAGTATAATTTCTTTG+AGG | - | chr3.4:63331781-63331800 | None:intergenic | 20.0% |
| !! | ATAATAAAAAACAACAGTTG+AGG | - | chr3.4:63332914-63332933 | None:intergenic | 20.0% |
| !! | ATAATCATAGTAGTTAATAG+CGG | - | chr3.4:63330862-63330881 | None:intergenic | 20.0% |
| !! | ATATTCATATGTTTCACTAA+GGG | + | chr3.4:63332617-63332636 | MS.gene38440:intron | 20.0% |
| !! | ATTGCATTTCTAATGTTTAT+GGG | + | chr3.4:63333560-63333579 | MS.gene38440:intron | 20.0% |
| !! | CTAAAGTATAATTTCTTTGA+GGG | - | chr3.4:63331780-63331799 | None:intergenic | 20.0% |
| !! | CTATTAACTACTATGATTAT+CGG | + | chr3.4:63330862-63330881 | MS.gene38440:intron | 20.0% |
| !! | CTTCAAAATTTAAAAGTCTT+AGG | - | chr3.4:63330555-63330574 | None:intergenic | 20.0% |
| !! | CTTGGTTTAAAAAAAAAACA+AGG | + | chr3.4:63330393-63330412 | MS.gene38440:intron | 20.0% |
| !! | GAATGAAATATAAGCAAAAA+CGG | + | chr3.4:63334013-63334032 | MS.gene38440:intron | 20.0% |
| !! | GTGAACTGAAAAAAAAAATA+GGG | + | chr3.4:63333691-63333710 | MS.gene38440:intron | 20.0% |
| !! | GTTACTATCAATTAAAACTA+CGG | + | chr3.4:63331825-63331844 | MS.gene38440:intron | 20.0% |
| !! | TAAAACCTTTCATAAGATTT+AGG | + | chr3.4:63330635-63330654 | MS.gene38440:intron | 20.0% |
| !! | TAATAAAAAACAACAGTTGA+GGG | - | chr3.4:63332913-63332932 | None:intergenic | 20.0% |
| !! | TAATCTCAAATATCAAACTT+AGG | - | chr3.4:63333941-63333960 | None:intergenic | 20.0% |
| !! | TATATTCATATGTTTCACTA+AGG | + | chr3.4:63332616-63332635 | MS.gene38440:intron | 20.0% |
| !! | TCATTAAATTAAACTAGGTA+TGG | + | chr3.4:63330948-63330967 | MS.gene38440:intron | 20.0% |
| !! | TCCTGAAATATAAACAAAAA+GGG | - | chr3.4:63334100-63334119 | None:intergenic | 20.0% |
| !! | TGTGAACTGAAAAAAAAAAT+AGG | + | chr3.4:63333690-63333709 | MS.gene38440:intron | 20.0% |
| !! | TGTTTAAAAAAGGAAGAATA+AGG | - | chr3.4:63333630-63333649 | None:intergenic | 20.0% |
| !! | TTCAACTTCACTAAAAATTA+CGG | - | chr3.4:63333915-63333934 | None:intergenic | 20.0% |
| !!! | AATGATAATGATAATGTTGA+TGG | + | chr3.4:63331225-63331244 | MS.gene38440:CDS | 20.0% |
| !!! | ACAAACATTTTTATGTTTGT+TGG | + | chr3.4:63331917-63331936 | MS.gene38440:intron | 20.0% |
| !!! | ATAATGATAATTTTGATAGC+AGG | + | chr3.4:63334670-63334689 | MS.gene38440:intron | 20.0% |
| !!! | ATGATAATGATAATGTTGAT+GGG | + | chr3.4:63331226-63331245 | MS.gene38440:CDS | 20.0% |
| !!! | ATTTTTTTTTTCAGTTCACA+AGG | - | chr3.4:63333690-63333709 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTTTTTTAAACCA+AGG | - | chr3.4:63330395-63330414 | None:intergenic | 20.0% |
| !!! | GAGAATTTTGAGATAATTTA+TGG | - | chr3.4:63333844-63333863 | None:intergenic | 20.0% |
| !!! | TCAGGACTATATTTTAAAAA+CGG | + | chr3.4:63334114-63334133 | MS.gene38440:intron | 20.0% |
| !!! | TTTCGTAATGTTTTGAATTT+TGG | + | chr3.4:63330585-63330604 | MS.gene38440:intron | 20.0% |
| !!! | TTTTTAAACAGACTTATTTG+AGG | + | chr3.4:63334418-63334437 | MS.gene38440:intron | 20.0% |
| !!! | TTTTTGCTTATATTTCATTC+AGG | - | chr3.4:63334013-63334032 | None:intergenic | 20.0% |
| ! | AAACAATAGTGTGTATTTGA+AGG | + | chr3.4:63330886-63330905 | MS.gene38440:intron | 25.0% |
| ! | AACAATAGTGTGTATTTGAA+GGG | + | chr3.4:63330887-63330906 | MS.gene38440:intron | 25.0% |
| ! | ACTTATTTGAACTTATCTAG+TGG | - | chr3.4:63333879-63333898 | None:intergenic | 25.0% |
| ! | CATTAGAAATGCAATTTGAA+AGG | - | chr3.4:63333555-63333574 | None:intergenic | 25.0% |
| ! | CATTAGTCATTGTTTAAGTA+AGG | + | chr3.4:63331066-63331085 | MS.gene38440:intron | 25.0% |
| ! | CTAATGTTTATGGGTAATTT+GGG | + | chr3.4:63333569-63333588 | MS.gene38440:intron | 25.0% |
| ! | GATGTACTTGATTAAAAATC+AGG | + | chr3.4:63334049-63334068 | MS.gene38440:intron | 25.0% |
| ! | GTAATTATCTGTTCTAATCT+GGG | + | chr3.4:63332579-63332598 | MS.gene38440:intron | 25.0% |
| ! | GTCCTGAAATATAAACAAAA+AGG | - | chr3.4:63334101-63334120 | None:intergenic | 25.0% |
| ! | TAATTATCTGTTCTAATCTG+GGG | + | chr3.4:63332580-63332599 | MS.gene38440:intron | 25.0% |
| ! | TCCAAAAAGTTATGAAATAG+CGG | + | chr3.4:63330775-63330794 | MS.gene38440:intron | 25.0% |
| ! | TCTAATGTTTATGGGTAATT+TGG | + | chr3.4:63333568-63333587 | MS.gene38440:intron | 25.0% |
| ! | TGTAATTATCTGTTCTAATC+TGG | + | chr3.4:63332578-63332597 | MS.gene38440:intron | 25.0% |
| ! | TTCAATAGTCATTGTTTAAG+TGG | + | chr3.4:63331705-63331724 | MS.gene38440:intron | 25.0% |
| ! | TTGTATATGTGCTTTCTATT+GGG | + | chr3.4:63333006-63333025 | MS.gene38440:intron | 25.0% |
| ! | TTTGAAAAAATTCAGTGCAT+TGG | + | chr3.4:63333750-63333769 | MS.gene38440:intron | 25.0% |
| !! | AAAATGAATGATGATGAGAA+TGG | + | chr3.4:63329900-63329919 | MS.gene38440:CDS | 25.0% |
| !! | AACATATATCTGAAGCTTTA+TGG | + | chr3.4:63334894-63334913 | MS.gene38440:CDS | 25.0% |
| !! | ATGCAATTACGTAAACTTTT+AGG | - | chr3.4:63331540-63331559 | None:intergenic | 25.0% |
| !! | ATTATTTAAGGTTGATCTGA+AGG | + | chr3.4:63333441-63333460 | MS.gene38440:intron | 25.0% |
| !! | TGATAATGATAATGTTGATG+GGG | + | chr3.4:63331227-63331246 | MS.gene38440:CDS | 25.0% |
| !! | TGCTCATTAAACAAAAGTAT+TGG | + | chr3.4:63334464-63334483 | MS.gene38440:intron | 25.0% |
| !! | TTGTTTCTCCAATAGAAATT+CGG | + | chr3.4:63332058-63332077 | MS.gene38440:intron | 25.0% |
| !! | TTTCTCTTGTGTGTTTTATA+AGG | + | chr3.4:63331634-63331653 | MS.gene38440:intron | 25.0% |
| !!! | AATCTCCAAGTATTATTTTG+AGG | - | chr3.4:63331370-63331389 | None:intergenic | 25.0% |
| !!! | ACCCTTTTTGTTTATATTTC+AGG | + | chr3.4:63334096-63334115 | MS.gene38440:intron | 25.0% |
| !!! | ATGGTTCGTAATTTTAGTAA+CGG | - | chr3.4:63332747-63332766 | None:intergenic | 25.0% |
| !!! | CTTCCTTTTTTAAACAAAGA+GGG | + | chr3.4:63333634-63333653 | MS.gene38440:intron | 25.0% |
| !!! | TCTTCCTTTTTTAAACAAAG+AGG | + | chr3.4:63333633-63333652 | MS.gene38440:intron | 25.0% |
| !!! | TTCCTTTTTTAAACAAAGAG+GGG | + | chr3.4:63333635-63333654 | MS.gene38440:intron | 25.0% |
| AAAACCATGATTCAACACAT+TGG | - | chr3.4:63332840-63332859 | None:intergenic | 30.0% | |
| AAACATCTCAAACTGGATAA+TGG | + | chr3.4:63329011-63329030 | MS.gene38440:CDS | 30.0% | |
| AAACTCGCTATATGGAATTA+TGG | + | chr3.4:63331588-63331607 | MS.gene38440:intron | 30.0% | |
| AAATCATGGCAATGATGAAT+CGG | + | chr3.4:63329971-63329990 | MS.gene38440:CDS | 30.0% | |
| AAATCCAATGTGTTGAATCA+TGG | + | chr3.4:63332833-63332852 | MS.gene38440:intron | 30.0% | |
| AACCACCTAAATCTTATGAA+AGG | - | chr3.4:63330643-63330662 | None:intergenic | 30.0% | |
| AACCTTTCATAAGATTTAGG+TGG | + | chr3.4:63330638-63330657 | MS.gene38440:intron | 30.0% | |
| AAGGAGAAAATGAATGATGA+TGG | + | chr3.4:63331192-63331211 | MS.gene38440:CDS | 30.0% | |
| AATAACAATCAAATAGGCGT+AGG | - | chr3.4:63332019-63332038 | None:intergenic | 30.0% | |
| AATTATCTGTTCTAATCTGG+GGG | + | chr3.4:63332581-63332600 | MS.gene38440:intron | 30.0% | |
| AGACAAGAATGCAGATATAA+AGG | - | chr3.4:63334809-63334828 | None:intergenic | 30.0% | |
| AGTCATTGTTTAAGTGGTTA+TGG | + | chr3.4:63331711-63331730 | MS.gene38440:intron | 30.0% | |
| AGTTTACGTAATTGCATAAG+TGG | + | chr3.4:63331543-63331562 | MS.gene38440:intron | 30.0% | |
| ATAGAAATTCGGAAAGACAA+TGG | + | chr3.4:63332069-63332088 | MS.gene38440:intron | 30.0% | |
| ATATGTTGCTGTAAAAGTCT+AGG | - | chr3.4:63333333-63333352 | None:intergenic | 30.0% | |
| CTCCAAAGAACTTGATTTAA+GGG | - | chr3.4:63332235-63332254 | None:intergenic | 30.0% | |
| CTTCCTTCTTTGATTCTTTA+CGG | + | chr3.4:63330461-63330480 | MS.gene38440:intron | 30.0% | |
| CTTGTATATGTGCTTTCTAT+TGG | + | chr3.4:63333005-63333024 | MS.gene38440:intron | 30.0% | |
| GAGAAAGTGAATAATGATGT+TGG | + | chr3.4:63329783-63329802 | MS.gene38440:CDS | 30.0% | |
| GTCATTGTTTAAGTGGTTAT+GGG | + | chr3.4:63331712-63331731 | MS.gene38440:intron | 30.0% | |
| GTTGTAGAGTTGAAAAGTTT+GGG | + | chr3.4:63330117-63330136 | MS.gene38440:intron | 30.0% | |
| TAATCATGAAACTCGCTATA+TGG | + | chr3.4:63331580-63331599 | MS.gene38440:intron | 30.0% | |
| TCAAATAAGTCAATCCAATC+AGG | + | chr3.4:63333889-63333908 | MS.gene38440:intron | 30.0% | |
| TCTCAAATATCAAACTTAGG+TGG | - | chr3.4:63333938-63333957 | None:intergenic | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr3.4:63330375-63330394 | MS.gene38440:intron | 30.0% | |
| TGAGACTTGTCTTGAAAATT+TGG | + | chr3.4:63334283-63334302 | MS.gene38440:intron | 30.0% | |
| TGCTTATATTTCATTCAGGA+GGG | - | chr3.4:63334009-63334028 | None:intergenic | 30.0% | |
| TGTTGTAGAGTTGAAAAGTT+TGG | + | chr3.4:63330116-63330135 | MS.gene38440:intron | 30.0% | |
| TTGCTTATATTTCATTCAGG+AGG | - | chr3.4:63334010-63334029 | None:intergenic | 30.0% | |
| TTGTCTTTCCGAATTTCTAT+TGG | - | chr3.4:63332069-63332088 | None:intergenic | 30.0% | |
| ! | AATGATGATGATGTAGCAAT+GGG | + | chr3.4:63329657-63329676 | MS.gene38440:CDS | 30.0% |
| ! | AATGATGTTGGTGAAAATCA+TGG | + | chr3.4:63329795-63329814 | MS.gene38440:CDS | 30.0% |
| ! | CATATCTTTTGTAGCCAATT+TGG | - | chr3.4:63332319-63332338 | None:intergenic | 30.0% |
| ! | CTCTCTTGTGTGTTTTATAA+GGG | + | chr3.4:63330993-63331012 | MS.gene38440:intron | 30.0% |
| ! | GAAGTATTTGATTAATTCGC+CGG | + | chr3.4:63329293-63329312 | MS.gene38440:CDS | 30.0% |
| ! | GAGAGAAACTGAAGTTTTTA+CGG | - | chr3.4:63330442-63330461 | None:intergenic | 30.0% |
| ! | TACCCCTCTTTGTTTAAAAA+AGG | - | chr3.4:63333640-63333659 | None:intergenic | 30.0% |
| ! | TATTTCCTTCTTTTTGCAGT+GGG | + | chr3.4:63333044-63333063 | MS.gene38440:intron | 30.0% |
| ! | TCTCTCTTGTGTGTTTTATA+AGG | + | chr3.4:63330992-63331011 | MS.gene38440:intron | 30.0% |
| ! | TTATTTCCTTCTTTTTGCAG+TGG | + | chr3.4:63333043-63333062 | MS.gene38440:intron | 30.0% |
| !! | ACCGCTATTTCATAACTTTT+TGG | - | chr3.4:63330779-63330798 | None:intergenic | 30.0% |
| !! | CGTAATGTTTTGAATTTTGG+TGG | + | chr3.4:63330588-63330607 | MS.gene38440:intron | 30.0% |
| !!! | GGTTAGGGTTTTTTGAATTA+GGG | - | chr3.4:63329070-63329089 | None:intergenic | 30.0% |
| !!! | GTTAGGGTTTTTTGAATTAG+GGG | - | chr3.4:63329069-63329088 | None:intergenic | 30.0% |
| AAAAAAATAGTACTCCGACC+AGG | - | chr3.4:63334529-63334548 | None:intergenic | 35.0% | |
| AAAAAATAGTACTCCGACCA+GGG | - | chr3.4:63334528-63334547 | None:intergenic | 35.0% | |
| AAATCGTGGCAATGAACAAT+TGG | + | chr3.4:63331275-63331294 | MS.gene38440:CDS | 35.0% | |
| AAATCTCTTCAAGATGTTCG+AGG | - | chr3.4:63329200-63329219 | None:intergenic | 35.0% | |
| AACATGACATTGATGTCATG+TGG | - | chr3.4:63331894-63331913 | None:intergenic | 35.0% | |
| AAGATGTTCGAGGATTTGAA+GGG | - | chr3.4:63329190-63329209 | None:intergenic | 35.0% | |
| ACAAGTGGAGAAATATGATG+CGG | + | chr3.4:63333464-63333483 | MS.gene38440:intron | 35.0% | |
| ACGCATCTTCTCTCAAAAAA+CGG | + | chr3.4:63330508-63330527 | MS.gene38440:intron | 35.0% | |
| ACTAAAAATTACGGCCTGAT+TGG | - | chr3.4:63333906-63333925 | None:intergenic | 35.0% | |
| ACTAAGGTTAGACTAAATGC+AGG | + | chr3.4:63334851-63334870 | MS.gene38440:CDS | 35.0% | |
| AGAAGGTTGTTAGAAGGATT+GGG | + | chr3.4:63329756-63329775 | MS.gene38440:CDS | 35.0% | |
| AGAAGGTTGTTAGAAGGTTT+GGG | + | chr3.4:63329621-63329640 | MS.gene38440:CDS | 35.0% | |
| ATATCTGCATTCTTGTCTCA+AGG | + | chr3.4:63334811-63334830 | MS.gene38440:CDS | 35.0% | |
| ATGCAGATATAAAGGAGAAG+TGG | - | chr3.4:63334801-63334820 | None:intergenic | 35.0% | |
| CAAGAAAACAATACCTTCCT+AGG | - | chr3.4:63333525-63333544 | None:intergenic | 35.0% | |
| CAAGAAGGAAGAAAAGGAAA+TGG | + | chr3.4:63333103-63333122 | MS.gene38440:CDS | 35.0% | |
| CACAGTAACTGTACAAAACA+CGG | - | chr3.4:63334582-63334601 | None:intergenic | 35.0% | |
| CGACGATCATTACTATAGTT+GGG | - | chr3.4:63332504-63332523 | None:intergenic | 35.0% | |
| CTACAAAAGATATGAATCGC+AGG | + | chr3.4:63332325-63332344 | MS.gene38440:CDS | 35.0% | |
| CTTCCTAGGATATATACACA+GGG | - | chr3.4:63333511-63333530 | None:intergenic | 35.0% | |
| GACGATCATTACTATAGTTG+GGG | - | chr3.4:63332503-63332522 | None:intergenic | 35.0% | |
| GATAGTAACAACACCTTTGA+GGG | - | chr3.4:63331814-63331833 | None:intergenic | 35.0% | |
| GATCTTCCTAACTGTAGTAA+TGG | + | chr3.4:63332471-63332490 | MS.gene38440:CDS | 35.0% | |
| GATGCAAGTTATAGTTGAAG+CGG | + | chr3.4:63333208-63333227 | MS.gene38440:intron | 35.0% | |
| GCACTAAAAACAAGACACAA+GGG | + | chr3.4:63332114-63332133 | MS.gene38440:CDS | 35.0% | |
| GCTCCAAAGAACTTGATTTA+AGG | - | chr3.4:63332236-63332255 | None:intergenic | 35.0% | |
| GTCCCTTAAATCAAGTTCTT+TGG | + | chr3.4:63332230-63332249 | MS.gene38440:CDS | 35.0% | |
| GTGTTTGTGAAATTGCTGAA+GGG | + | chr3.4:63331124-63331143 | MS.gene38440:CDS | 35.0% | |
| TACGAACCATTACACGAAAT+TGG | + | chr3.4:63332757-63332776 | MS.gene38440:intron | 35.0% | |
| TAGAAGGTTGTTAGAAGGAT+TGG | + | chr3.4:63329755-63329774 | MS.gene38440:CDS | 35.0% | |
| TAGAAGGTTGTTAGAAGGTT+TGG | + | chr3.4:63329620-63329639 | MS.gene38440:CDS | 35.0% | |
| TAGTGCATATATCGAGAACA+TGG | - | chr3.4:63331681-63331700 | None:intergenic | 35.0% | |
| TATCTGCATTCTTGTCTCAA+GGG | + | chr3.4:63334812-63334831 | MS.gene38440:CDS | 35.0% | |
| TGAACGAAAACATCTCAAAC+TGG | + | chr3.4:63329004-63329023 | MS.gene38440:CDS | 35.0% | |
| TGATAGTAACAACACCTTTG+AGG | - | chr3.4:63331815-63331834 | None:intergenic | 35.0% | |
| TGCACTAAAAACAAGACACA+AGG | + | chr3.4:63332113-63332132 | MS.gene38440:CDS | 35.0% | |
| TGGATTCTAACATGGACTTT+GGG | - | chr3.4:63334772-63334791 | None:intergenic | 35.0% | |
| TGTAGCCAATTTGGATCTTA+CGG | - | chr3.4:63332310-63332329 | None:intergenic | 35.0% | |
| TGTTTGTGAAATTGCTGAAG+GGG | + | chr3.4:63331125-63331144 | MS.gene38440:CDS | 35.0% | |
| TTAGGAAGATCACTACTACA+AGG | - | chr3.4:63332462-63332481 | None:intergenic | 35.0% | |
| TTGCTGATGTGAAGAAACTT+CGG | + | chr3.4:63332205-63332224 | MS.gene38440:CDS | 35.0% | |
| TTGGTGAAAATCATGGTAAC+CGG | + | chr3.4:63329802-63329821 | MS.gene38440:CDS | 35.0% | |
| TTTACAAGACAGCATCCTTT+AGG | - | chr3.4:63332643-63332662 | None:intergenic | 35.0% | |
| TTTCTATCACGAATGCGTTT+CGG | + | chr3.4:63329235-63329254 | MS.gene38440:CDS | 35.0% | |
| TTTGTACAGTTACTGTGTCA+GGG | + | chr3.4:63334585-63334604 | MS.gene38440:intron | 35.0% | |
| ! | AGCAGTATTTAAAACAGTGG+TGG | - | chr3.4:63332723-63332742 | None:intergenic | 35.0% |
| ! | AGTGATGATGAGATGATGAT+GGG | + | chr3.4:63329945-63329964 | MS.gene38440:CDS | 35.0% |
| ! | CATTTCCTTTTCTTCCTTCT+TGG | - | chr3.4:63333105-63333124 | None:intergenic | 35.0% |
| ! | GAATGATGATGATGTAGCAA+TGG | + | chr3.4:63329656-63329675 | MS.gene38440:CDS | 35.0% |
| ! | GCAGTATTTAAAACAGTGGT+GGG | - | chr3.4:63332722-63332741 | None:intergenic | 35.0% |
| ! | GTTTCTTGATTTGATTGCGA+TGG | + | chr3.4:63329539-63329558 | MS.gene38440:CDS | 35.0% |
| ! | TAGTGATGATGAGATGATGA+TGG | + | chr3.4:63329944-63329963 | MS.gene38440:CDS | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr3.4:63330814-63330833 | MS.gene38440:intron | 35.0% |
| ! | TCAACTATAACTTGCATCCA+TGG | - | chr3.4:63333206-63333225 | None:intergenic | 35.0% |
| ! | TGAAGTGAAGAGGTTTTTGA+AGG | + | chr3.4:63329491-63329510 | MS.gene38440:CDS | 35.0% |
| ! | TGAATACCTTTTCCGAATCT+AGG | + | chr3.4:63334925-63334944 | MS.gene38440:CDS | 35.0% |
| ! | TTGAGAGAAGATGCGTTTTA+GGG | - | chr3.4:63330504-63330523 | None:intergenic | 35.0% |
| ! | TTTGAGAGAAGATGCGTTTT+AGG | - | chr3.4:63330505-63330524 | None:intergenic | 35.0% |
| ! | TTTTAAACAAAGAGGGGTAG+AGG | + | chr3.4:63333641-63333660 | MS.gene38440:intron | 35.0% |
| ! | TTTTGTACAGTTACTGTGTC+AGG | + | chr3.4:63334584-63334603 | MS.gene38440:intron | 35.0% |
| !! | ATGATGATGGGTGAAAATCA+TGG | + | chr3.4:63329957-63329976 | MS.gene38440:CDS | 35.0% |
| !! | ATTTTAGTGTTTGCTGCGTA+AGG | + | chr3.4:63330151-63330170 | MS.gene38440:intron | 35.0% |
| !! | TTCTTTGGAGCTAAAAGCAT+TGG | + | chr3.4:63332245-63332264 | MS.gene38440:CDS | 35.0% |
| !! | TTGTGTTTGGTGGTTTCTTT+TGG | + | chr3.4:63332956-63332975 | MS.gene38440:intron | 35.0% |
| !! | TTTTAACTAGTGAGCTACCA+TGG | + | chr3.4:63333186-63333205 | MS.gene38440:intron | 35.0% |
| !!! | GGGTTAGGGTTTTTTGAATT+AGG | - | chr3.4:63329071-63329090 | None:intergenic | 35.0% |
| !!! | GGTTTTTTGAATTAGGGGAT+CGG | - | chr3.4:63329064-63329083 | None:intergenic | 35.0% |
| !!! | GGTTTTTTTGAGACGTGAAT+CGG | - | chr3.4:63329112-63329131 | None:intergenic | 35.0% |
| !!! | GTTTTTTGAATTAGGGGATC+GGG | - | chr3.4:63329063-63329082 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTGAGAAGATGAA+AGG | - | chr3.4:63330489-63330508 | None:intergenic | 35.0% |
| AAAAATAGTACTCCGACCAG+GGG | - | chr3.4:63334527-63334546 | None:intergenic | 40.0% | |
| AAAGATTGCGATGGTTTCGA+AGG | + | chr3.4:63329683-63329702 | MS.gene38440:CDS | 40.0% | |
| AAATCATGGTAACCGGCAAT+TGG | + | chr3.4:63329809-63329828 | MS.gene38440:CDS | 40.0% | |
| AAGATTGCGATGGTTTCGAA+GGG | + | chr3.4:63329684-63329703 | MS.gene38440:CDS | 40.0% | |
| AATGGGAGAGTAGAAGGTTT+AGG | + | chr3.4:63329870-63329889 | MS.gene38440:CDS | 40.0% | |
| AATGGGTGAAAAGATTGCGA+TGG | + | chr3.4:63329674-63329693 | MS.gene38440:CDS | 40.0% | |
| ACAAGGAACAGAAATCTCCT+TGG | - | chr3.4:63332445-63332464 | None:intergenic | 40.0% | |
| ACCTTTATCTCTCATTCCAG+AGG | - | chr3.4:63331316-63331335 | None:intergenic | 40.0% | |
| AGAAATCTCCTTGGCAACAT+TGG | - | chr3.4:63332436-63332455 | None:intergenic | 40.0% | |
| ATCATCCCACTGCAAAAAGA+AGG | - | chr3.4:63333052-63333071 | None:intergenic | 40.0% | |
| ATGGGAGAGTAGAAGGTTTA+GGG | + | chr3.4:63329871-63329890 | MS.gene38440:CDS | 40.0% | |
| ATGTGCTTTCTATTGGGCAT+TGG | + | chr3.4:63333012-63333031 | MS.gene38440:intron | 40.0% | |
| ATGTTTCACTAAGGGCCTAA+AGG | + | chr3.4:63332625-63332644 | MS.gene38440:intron | 40.0% | |
| ATTTCACAAACACCTTCAGG+AGG | - | chr3.4:63331117-63331136 | None:intergenic | 40.0% | |
| CAAGATGTTCGAGGATTTGA+AGG | - | chr3.4:63329191-63329210 | None:intergenic | 40.0% | |
| CATCCCTGTGTATATATCCT+AGG | + | chr3.4:63333505-63333524 | MS.gene38440:intron | 40.0% | |
| CCTGTGTATATATCCTAGGA+AGG | + | chr3.4:63333509-63333528 | MS.gene38440:intron | 40.0% | |
| CCTTCCTAGGATATATACAC+AGG | - | chr3.4:63333512-63333531 | None:intergenic | 40.0% | |
| CGACTACCATTACTACAGTT+AGG | - | chr3.4:63332480-63332499 | None:intergenic | 40.0% | |
| CTGAACTTGACGATGTTTCA+AGG | + | chr3.4:63334167-63334186 | MS.gene38440:intron | 40.0% | |
| CTTGGAAGAAGAGACACTAA+GGG | + | chr3.4:63333131-63333150 | MS.gene38440:CDS | 40.0% | |
| GAAGGTTGTTAGAAGGATTG+GGG | + | chr3.4:63329757-63329776 | MS.gene38440:CDS | 40.0% | |
| GAAGGTTGTTAGAAGGTTTG+GGG | + | chr3.4:63329622-63329641 | MS.gene38440:CDS | 40.0% | |
| GCAATTTCACAAACACCTTC+AGG | - | chr3.4:63331120-63331139 | None:intergenic | 40.0% | |
| GCGACGATCATTACTATAGT+TGG | - | chr3.4:63332505-63332524 | None:intergenic | 40.0% | |
| GGTGTTTGTGAAATTGCTGA+AGG | + | chr3.4:63331123-63331142 | MS.gene38440:intron | 40.0% | |
| GGTTAAGAGTCTCTTGTGTT+TGG | + | chr3.4:63332943-63332962 | MS.gene38440:intron | 40.0% | |
| GGTTTGAGTAGCTACATAAG+TGG | + | chr3.4:63330908-63330927 | MS.gene38440:intron | 40.0% | |
| GTATTTGATTAATTCGCCGG+AGG | + | chr3.4:63329296-63329315 | MS.gene38440:CDS | 40.0% | |
| GTGGATTCTAACATGGACTT+TGG | - | chr3.4:63334773-63334792 | None:intergenic | 40.0% | |
| GTTGAATACAAGGAGAGATG+CGG | + | chr3.4:63329464-63329483 | MS.gene38440:CDS | 40.0% | |
| GTTTGTGAAAATGCTGCTGA+GGG | + | chr3.4:63329594-63329613 | MS.gene38440:CDS | 40.0% | |
| GTTTGTGAAATTGCTGAAGG+GGG | + | chr3.4:63331126-63331145 | MS.gene38440:CDS | 40.0% | |
| TAAAGGAGAAGTGGTTTGAG+TGG | - | chr3.4:63334792-63334811 | None:intergenic | 40.0% | |
| TAAGAGTCTCTTGTGTTTGG+TGG | + | chr3.4:63332946-63332965 | MS.gene38440:intron | 40.0% | |
| TAATGATGCCAATGTTGCCA+AGG | + | chr3.4:63332425-63332444 | MS.gene38440:CDS | 40.0% | |
| TACTTCTGTTGATGCGAATC+AGG | + | chr3.4:63330007-63330026 | MS.gene38440:CDS | 40.0% | |
| TCAACGCCAATTTCGTGTAA+TGG | - | chr3.4:63332766-63332785 | None:intergenic | 40.0% | |
| TGAAGCCGTAAGATCCAAAT+TGG | + | chr3.4:63332302-63332321 | MS.gene38440:CDS | 40.0% | |
| TGCTGATGTGAAGAAACTTC+GGG | + | chr3.4:63332206-63332225 | MS.gene38440:CDS | 40.0% | |
| TGTTAGAAGGTTTGGGGAAA+GGG | + | chr3.4:63329628-63329647 | MS.gene38440:CDS | 40.0% | |
| TGTTTGTGAAAATGCTGCTG+AGG | + | chr3.4:63329593-63329612 | MS.gene38440:CDS | 40.0% | |
| TTGATTGCGATGGTTTCGAA+GGG | + | chr3.4:63329549-63329568 | MS.gene38440:CDS | 40.0% | |
| TTGGCAACATTGGCATCATT+AGG | - | chr3.4:63332426-63332445 | None:intergenic | 40.0% | |
| TTGTTAGAAGGTTTGGGGAA+AGG | + | chr3.4:63329627-63329646 | MS.gene38440:CDS | 40.0% | |
| TTTGATTGCGATGGTTTCGA+AGG | + | chr3.4:63329548-63329567 | MS.gene38440:CDS | 40.0% | |
| TTTGTGAAAATGCTGCTGAG+GGG | + | chr3.4:63329595-63329614 | MS.gene38440:CDS | 40.0% | |
| ! | AAGATTTGAGGAAGCGTGAT+GGG | + | chr3.4:63331151-63331170 | MS.gene38440:CDS | 40.0% |
| ! | AGTTAAACTCTCTGGTGATG+AGG | + | chr3.4:63332137-63332156 | MS.gene38440:CDS | 40.0% |
| ! | ATCTGAAGCTTTATGGCTGT+TGG | + | chr3.4:63334901-63334920 | MS.gene38440:CDS | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr3.4:63330813-63330832 | MS.gene38440:intron | 40.0% |
| ! | GAAAAGGAAATGGACTTCCT+TGG | + | chr3.4:63333113-63333132 | MS.gene38440:CDS | 40.0% |
| ! | GCATCTAGAATGGGAGATAA+AGG | + | chr3.4:63330050-63330069 | MS.gene38440:intron | 40.0% |
| ! | GGCAGCAGTATTTAAAACAG+TGG | - | chr3.4:63332726-63332745 | None:intergenic | 40.0% |
| ! | GGTTTGAGTGGATTCTAACA+TGG | - | chr3.4:63334780-63334799 | None:intergenic | 40.0% |
| ! | TCCGTCTGGTGAGTATTTTT+CGG | + | chr3.4:63329320-63329339 | MS.gene38440:CDS | 40.0% |
| !! | ACCTCTGGAATGAGAGATAA+AGG | + | chr3.4:63331312-63331331 | MS.gene38440:CDS | 40.0% |
| !! | ATGTTCACTCTGCTTTTCAC+TGG | - | chr3.4:63332355-63332374 | None:intergenic | 40.0% |
| !! | CAAGACTTTAGGATTAGTGG+GGG | - | chr3.4:63334503-63334522 | None:intergenic | 40.0% |
| !! | CCAAGACTTTAGGATTAGTG+GGG | - | chr3.4:63334504-63334523 | None:intergenic | 40.0% |
| !! | GATGATGTAGCATTGATGGA+TGG | + | chr3.4:63331252-63331271 | MS.gene38440:CDS | 40.0% |
| !! | GCCAAGACTTTAGGATTAGT+GGG | - | chr3.4:63334505-63334524 | None:intergenic | 40.0% |
| !! | GTGGTTTCTTTTGGTTGTTG+TGG | + | chr3.4:63332965-63332984 | MS.gene38440:intron | 40.0% |
| AACCGGCAATTGGAAGAGAA+TGG | + | chr3.4:63329819-63329838 | MS.gene38440:CDS | 45.0% | |
| AACTAGTGCAGATAGTGAGG+TGG | + | chr3.4:63334730-63334749 | MS.gene38440:CDS | 45.0% | |
| AAGTCATGCTCAGACATACG+AGG | + | chr3.4:63332545-63332564 | MS.gene38440:CDS | 45.0% | |
| ACCTCACTATCTGCACTAGT+TGG | - | chr3.4:63334731-63334750 | None:intergenic | 45.0% | |
| ACTAGTGCAGATAGTGAGGT+GGG | + | chr3.4:63334731-63334750 | MS.gene38440:CDS | 45.0% | |
| AGATTGCGATGGTTTCGAAG+GGG | + | chr3.4:63329685-63329704 | MS.gene38440:CDS | 45.0% | |
| AGCCATTCTCTTCCAATTGC+CGG | - | chr3.4:63329824-63329843 | None:intergenic | 45.0% | |
| AGTCACACACTTTCCCTCAA+AGG | + | chr3.4:63331798-63331817 | MS.gene38440:intron | 45.0% | |
| ATGCGGTTGTTGAAGTGAAG+AGG | + | chr3.4:63329481-63329500 | MS.gene38440:CDS | 45.0% | |
| ATTCTTGTCTCAAGGGCTCA+GGG | + | chr3.4:63334819-63334838 | MS.gene38440:CDS | 45.0% | |
| CAATTGGAAGAGAATGGCTC+GGG | + | chr3.4:63329825-63329844 | MS.gene38440:CDS | 45.0% | |
| CACAAGGGAGTTAAACTCTC+TGG | + | chr3.4:63332129-63332148 | MS.gene38440:CDS | 45.0% | |
| CCCCACTAATCCTAAAGTCT+TGG | + | chr3.4:63334501-63334520 | MS.gene38440:intron | 45.0% | |
| CCTTAGTGTCTCTTCTTCCA+AGG | - | chr3.4:63333133-63333152 | None:intergenic | 45.0% | |
| CCTTGGAAGAAGAGACACTA+AGG | + | chr3.4:63333130-63333149 | MS.gene38440:CDS | 45.0% | |
| CGAGCCCAAAAATGCTATAG+CGG | - | chr3.4:63330821-63330840 | None:intergenic | 45.0% | |
| CTCAGGGCTCATCTTAACTA+AGG | + | chr3.4:63334835-63334854 | MS.gene38440:CDS | 45.0% | |
| CTCGGCAGAGTAGTTAATAG+TGG | + | chr3.4:63330202-63330221 | MS.gene38440:intron | 45.0% | |
| GAGCCCAAAAATGCTATAGC+GGG | - | chr3.4:63330820-63330839 | None:intergenic | 45.0% | |
| GAGGATTTGAAGGGAGACTT+CGG | - | chr3.4:63329181-63329200 | None:intergenic | 45.0% | |
| GAGGTTAGAAGGTTTGGGAA+AGG | + | chr3.4:63331173-63331192 | MS.gene38440:CDS | 45.0% | |
| GATGAATCGGAAGAGAGAGT+TGG | + | chr3.4:63329984-63330003 | MS.gene38440:CDS | 45.0% | |
| GATGGGAGGTTAGAAGGTTT+GGG | + | chr3.4:63331168-63331187 | MS.gene38440:CDS | 45.0% | |
| GCAATTGGAAGAGAATGGCT+CGG | + | chr3.4:63329824-63329843 | MS.gene38440:CDS | 45.0% | |
| GCCGAAAAATACTCACCAGA+CGG | - | chr3.4:63329324-63329343 | None:intergenic | 45.0% | |
| GCGCCGTAAAGAATCAAAGA+AGG | - | chr3.4:63330467-63330486 | None:intergenic | 45.0% | |
| GGGAGTAGAAGGTTGTTAGA+AGG | + | chr3.4:63329615-63329634 | MS.gene38440:CDS | 45.0% | |
| GTCAGCCAAGAAGGAAGAAA+AGG | + | chr3.4:63333097-63333116 | MS.gene38440:CDS | 45.0% | |
| TATAAGGGTTTGCCTCCTGA+AGG | + | chr3.4:63331102-63331121 | MS.gene38440:intron | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr3.4:63330289-63330308 | None:intergenic | 45.0% | |
| TATCTGTTCTAATCTGGGGG+TGG | + | chr3.4:63332584-63332603 | MS.gene38440:intron | 45.0% | |
| TCAGATGTGTGCAATGCATC+AGG | - | chr3.4:63332285-63332304 | None:intergenic | 45.0% | |
| TCCAACTAGTGCAGATAGTG+AGG | + | chr3.4:63334727-63334746 | MS.gene38440:CDS | 45.0% | |
| TCTTATTCCCTACCCATTGC+AGG | + | chr3.4:63331861-63331880 | MS.gene38440:intron | 45.0% | |
| TGAACATCTGCAGAATCCAC+AGG | - | chr3.4:63332890-63332909 | None:intergenic | 45.0% | |
| TGACTGACTGCACTTATGTG+CGG | + | chr3.4:63332794-63332813 | MS.gene38440:intron | 45.0% | |
| TGATGGGAGGTTAGAAGGTT+TGG | + | chr3.4:63331167-63331186 | MS.gene38440:CDS | 45.0% | |
| TGATTGCGATGGTTTCGAAG+GGG | + | chr3.4:63329550-63329569 | MS.gene38440:CDS | 45.0% | |
| TGCTGTTGCGGTTGAATGTA+CGG | + | chr3.4:63329269-63329288 | MS.gene38440:CDS | 45.0% | |
| TGTTGATGCGAATCAGGAAG+TGG | + | chr3.4:63330013-63330032 | MS.gene38440:CDS | 45.0% | |
| TTGAATTAGGGGATCGGGAA+CGG | - | chr3.4:63329058-63329077 | None:intergenic | 45.0% | |
| ! | AAGAGATTGAAGGTGCGCTT+TGG | + | chr3.4:63329412-63329431 | MS.gene38440:CDS | 45.0% |
| ! | AGAGATTGAAGGTGCGCTTT+GGG | + | chr3.4:63329413-63329432 | MS.gene38440:CDS | 45.0% |
| ! | AGGTTGATCTGAAGGACAAG+TGG | + | chr3.4:63333449-63333468 | MS.gene38440:intron | 45.0% |
| ! | CAAGCTGGTGCATCTAGAAT+GGG | + | chr3.4:63330041-63330060 | MS.gene38440:intron | 45.0% |
| ! | CTTCTTGGCTGACTTTGTTG+CGG | - | chr3.4:63333090-63333109 | None:intergenic | 45.0% |
| ! | GAAGATTTGAGGAAGCGTGA+TGG | + | chr3.4:63331150-63331169 | MS.gene38440:CDS | 45.0% |
| ! | GCATTGATGGATGGAAATCG+TGG | + | chr3.4:63331261-63331280 | MS.gene38440:CDS | 45.0% |
| ! | GCATTTTCACAAACACCTCC+CGG | - | chr3.4:63329588-63329607 | None:intergenic | 45.0% |
| ! | GCATTTTCACAAACACCTCC+TGG | - | chr3.4:63329588-63329607 | None:intergenic | 45.0% |
| ! | GGACGATGATGTAGCATTGA+TGG | + | chr3.4:63331248-63331267 | MS.gene38440:CDS | 45.0% |
| ! | GTTTGCTGCGTAAGGTTTGA+TGG | + | chr3.4:63330159-63330178 | MS.gene38440:intron | 45.0% |
| ! | TTGATAGCAGGTTCGAGCTA+TGG | + | chr3.4:63334682-63334701 | MS.gene38440:intron | 45.0% |
| !! | AGAGGTTTTTGAAGGAAGCG+TGG | + | chr3.4:63329499-63329518 | MS.gene38440:CDS | 45.0% |
| !! | AGATTGAAGCGTTGAGGATG+TGG | - | chr3.4:63329158-63329177 | None:intergenic | 45.0% |
| !! | AGGTTTTTGAAGGAAGCGTG+GGG | + | chr3.4:63329501-63329520 | MS.gene38440:CDS | 45.0% |
| !! | AGTATTTTTCGGCGGTGAAG+AGG | + | chr3.4:63329331-63329350 | MS.gene38440:CDS | 45.0% |
| !! | CGCTATAGCATTTTTGGGCT+CGG | + | chr3.4:63330819-63330838 | MS.gene38440:intron | 45.0% |
| !! | GAGGTTTTTGAAGGAAGCGT+GGG | + | chr3.4:63329500-63329519 | MS.gene38440:CDS | 45.0% |
| !! | GATTGAAGCGTTGAGGATGT+GGG | - | chr3.4:63329157-63329176 | None:intergenic | 45.0% |
| !! | GGCCAAGACTTTAGGATTAG+TGG | - | chr3.4:63334506-63334525 | None:intergenic | 45.0% |
| !! | GTCTGGTGAGTATTTTTCGG+CGG | + | chr3.4:63329323-63329342 | MS.gene38440:CDS | 45.0% |
| !! | TCATGATGCTTGCTGTCTCT+TGG | + | chr3.4:63332674-63332693 | MS.gene38440:intron | 45.0% |
| AATCCACAGGCCACTACATC+TGG | - | chr3.4:63332877-63332896 | None:intergenic | 50.0% | |
| AATCCTAAAGTCTTGGCCCC+TGG | + | chr3.4:63334508-63334527 | MS.gene38440:intron | 50.0% | |
| ACTTGCCCGTCGCATTAAGT+TGG | - | chr3.4:63332529-63332548 | None:intergenic | 50.0% | |
| ATGTGGCAACAGTCCTGCAA+TGG | - | chr3.4:63331877-63331896 | None:intergenic | 50.0% | |
| CAACAGTCCTGCAATGGGTA+GGG | - | chr3.4:63331871-63331890 | None:intergenic | 50.0% | |
| CATTCTTGTCTCAAGGGCTC+AGG | + | chr3.4:63334818-63334837 | MS.gene38440:CDS | 50.0% | |
| CGCAACAAAGTCAGCCAAGA+AGG | + | chr3.4:63333088-63333107 | MS.gene38440:CDS | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr3.4:63330274-63330293 | None:intergenic | 50.0% | |
| CTAACCCTACTTCCACTCTC+CGG | + | chr3.4:63329084-63329103 | MS.gene38440:CDS | 50.0% | |
| CTGAAGGGGGTGAAGATTTG+AGG | + | chr3.4:63331139-63331158 | MS.gene38440:CDS | 50.0% | |
| CTTGCCCGTCGCATTAAGTT+GGG | - | chr3.4:63332528-63332547 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | + | chr3.4:63330788-63330807 | MS.gene38440:intron | 50.0% | |
| GAAGAAGAGACACTAAGGGC+TGG | + | chr3.4:63333135-63333154 | MS.gene38440:CDS | 50.0% | |
| GAAGAGATTTACCGCGACGA+CGG | + | chr3.4:63329210-63329229 | MS.gene38440:CDS | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr3.4:63330269-63330288 | MS.gene38440:intron | 50.0% | |
| GCAAGCTGGTGCATCTAGAA+TGG | + | chr3.4:63330040-63330059 | MS.gene38440:intron | 50.0% | |
| GGAGAGTGGAAGTAGGGTTA+GGG | - | chr3.4:63329085-63329104 | None:intergenic | 50.0% | |
| GGATGTGGGATTGAAGAACG+CGG | - | chr3.4:63329143-63329162 | None:intergenic | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr3.4:63330290-63330309 | MS.gene38440:intron | 50.0% | |
| GGTTTGGAGAAGGAAACTGG+AGG | + | chr3.4:63333302-63333321 | MS.gene38440:intron | 50.0% | |
| GTGTGCAATGCATCAGGAAG+AGG | - | chr3.4:63332279-63332298 | None:intergenic | 50.0% | |
| TATGCCACCACCAGATGTAG+TGG | + | chr3.4:63332864-63332883 | MS.gene38440:intron | 50.0% | |
| TGAAGAGGATTTGGAGGGGA+AGG | + | chr3.4:63329346-63329365 | MS.gene38440:CDS | 50.0% | |
| TGATAGAAACTCCGTCGTCG+CGG | - | chr3.4:63329224-63329243 | None:intergenic | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr3.4:63330269-63330288 | None:intergenic | 50.0% | |
| TGTGGCAACAGTCCTGCAAT+GGG | - | chr3.4:63331876-63331895 | None:intergenic | 50.0% | |
| TGTTAGGGTTGCAGAGAGGT+TGG | + | chr3.4:63329437-63329456 | MS.gene38440:CDS | 50.0% | |
| TTTCGGCGGTGAAGAGGATT+TGG | + | chr3.4:63329337-63329356 | MS.gene38440:CDS | 50.0% | |
| ! | AAGCGTGATGGGAGGTTAGA+AGG | + | chr3.4:63331162-63331181 | MS.gene38440:CDS | 50.0% |
| ! | AAGGGGAATGGTTTGTGTCC+AGG | + | chr3.4:63329567-63329586 | MS.gene38440:CDS | 50.0% |
| ! | AAGGGGAATGGTTTGTGTCC+GGG | + | chr3.4:63329567-63329586 | MS.gene38440:CDS | 50.0% |
| ! | AGGCGTAATGGGAGAGTAGA+AGG | + | chr3.4:63329864-63329883 | MS.gene38440:CDS | 50.0% |
| ! | ATTTGAGGAAGCGTGATGGG+AGG | + | chr3.4:63331154-63331173 | MS.gene38440:CDS | 50.0% |
| ! | GAAGGGGAATGGTTTGTGTC+CGG | + | chr3.4:63329566-63329585 | MS.gene38440:CDS | 50.0% |
| ! | GAATGTCGAGGAGGCGTAAT+GGG | + | chr3.4:63329853-63329872 | MS.gene38440:CDS | 50.0% |
| ! | GAGTGCTTACTGTGCTGTTG+CGG | + | chr3.4:63329257-63329276 | MS.gene38440:CDS | 50.0% |
| ! | TAGGATTAGTGGGGGAGCTT+TGG | - | chr3.4:63334495-63334514 | None:intergenic | 50.0% |
| ! | TTGCCCGTCGCATTAAGTTG+GGG | - | chr3.4:63332527-63332546 | None:intergenic | 50.0% |
| !! | AAGGTGCGCTTTGGGATGTT+AGG | + | chr3.4:63329421-63329440 | MS.gene38440:CDS | 50.0% |
| !! | AGGTGCGCTTTGGGATGTTA+GGG | + | chr3.4:63329422-63329441 | MS.gene38440:CDS | 50.0% |
| !! | ATGGACTTTGGGTTGCCAGT+TGG | - | chr3.4:63334761-63334780 | None:intergenic | 50.0% |
| !! | CTTCGGAGATTGAAGCGTTG+AGG | - | chr3.4:63329164-63329183 | None:intergenic | 50.0% |
| !! | GGTTGGTGGGGTTGAATACA+AGG | + | chr3.4:63329454-63329473 | MS.gene38440:CDS | 50.0% |
| !! | GGTTTTTGAAGGAAGCGTGG+GGG | + | chr3.4:63329502-63329521 | MS.gene38440:CDS | 50.0% |
| !! | TCACTCTGCTTTTCACTGGC+TGG | - | chr3.4:63332351-63332370 | None:intergenic | 50.0% |
| !! | TGATGCTTGCTGTCTCTTGG+AGG | + | chr3.4:63332677-63332696 | MS.gene38440:intron | 50.0% |
| AATTAGGGGATCGGGAACGG+TGG | - | chr3.4:63329055-63329074 | None:intergenic | 55.0% | |
| AGCAGCGCAACACTGCATAG+CGG | + | chr3.4:63330319-63330338 | MS.gene38440:intron | 55.0% | |
| AGGATTTGGAGGGGAAGGAG+AGG | + | chr3.4:63329351-63329370 | MS.gene38440:CDS | 55.0% | |
| AGTGCAGATAGTGAGGTGGG+AGG | + | chr3.4:63334734-63334753 | MS.gene38440:CDS | 55.0% | |
| ATGCTGCTGAGGGGAGTAGA+AGG | + | chr3.4:63329604-63329623 | MS.gene38440:CDS | 55.0% | |
| ATTGAAGAACGCGGAGGAGG+AGG | - | chr3.4:63329134-63329153 | None:intergenic | 55.0% | |
| CAGGAAGTGGAACAGCAAGC+TGG | + | chr3.4:63330026-63330045 | MS.gene38440:CDS | 55.0% | |
| CGGAGAGTGGAAGTAGGGTT+AGG | - | chr3.4:63329086-63329105 | None:intergenic | 55.0% | |
| CTAAAGTCTTGGCCCCTGGT+CGG | + | chr3.4:63334512-63334531 | MS.gene38440:intron | 55.0% | |
| GAAGCGATAGTTCGCACCTC+TGG | + | chr3.4:63331297-63331316 | MS.gene38440:CDS | 55.0% | |
| GCAACAGTCCTGCAATGGGT+AGG | - | chr3.4:63331872-63331891 | None:intergenic | 55.0% | |
| GCGATGGTTTCGAAGGGGAA+TGG | + | chr3.4:63329555-63329574 | MS.gene38440:CDS | 55.0% | |
| GCGGTGAAGAGGATTTGGAG+GGG | + | chr3.4:63329342-63329361 | MS.gene38440:CDS | 55.0% | |
| GGATTTGGAGGGGAAGGAGA+GGG | + | chr3.4:63329352-63329371 | MS.gene38440:CDS | 55.0% | |
| GGCGGTGAAGAGGATTTGGA+GGG | + | chr3.4:63329341-63329360 | MS.gene38440:CDS | 55.0% | |
| GGCTGCTATAGCGCTGCTAT+TGG | - | chr3.4:63330228-63330247 | None:intergenic | 55.0% | |
| GGGATGTTAGGGTTGCAGAG+AGG | + | chr3.4:63329433-63329452 | MS.gene38440:CDS | 55.0% | |
| GTCGCCCCAACTTAATGCGA+CGG | + | chr3.4:63332520-63332539 | MS.gene38440:CDS | 55.0% | |
| TACTCACCAGACGGATCCTC+CGG | - | chr3.4:63329315-63329334 | None:intergenic | 55.0% | |
| TAGGGTTGCAGAGAGGTTGG+TGG | + | chr3.4:63329440-63329459 | MS.gene38440:CDS | 55.0% | |
| TCGCCCCAACTTAATGCGAC+GGG | + | chr3.4:63332521-63332540 | MS.gene38440:CDS | 55.0% | |
| TGTGGGATTGAAGAACGCGG+AGG | - | chr3.4:63329140-63329159 | None:intergenic | 55.0% | |
| TTGAAGAACGCGGAGGAGGA+GGG | - | chr3.4:63329133-63329152 | None:intergenic | 55.0% | |
| ! | AAGGAAGCGTGGGGGAGTAT+GGG | + | chr3.4:63329510-63329529 | MS.gene38440:CDS | 55.0% |
| ! | AGGGTTGCAGAGAGGTTGGT+GGG | + | chr3.4:63329441-63329460 | MS.gene38440:CDS | 55.0% |
| ! | GATCGGGAACGGTGGTGTTA+CGG | - | chr3.4:63329047-63329066 | None:intergenic | 55.0% |
| ! | GGAATGTCGAGGAGGCGTAA+TGG | + | chr3.4:63329852-63329871 | MS.gene38440:CDS | 55.0% |
| ! | GGGAATGGTTTGTGTCCAGG+AGG | + | chr3.4:63329705-63329724 | MS.gene38440:CDS | 55.0% |
| ! | TCTCTGGTGATGAGGAAGCG+AGG | + | chr3.4:63332145-63332164 | MS.gene38440:CDS | 55.0% |
| ! | TGGTGTCGGATGGGTTTGTG+CGG | + | chr3.4:63329382-63329401 | MS.gene38440:CDS | 55.0% |
| ! | TTGGAAGAGAATGGCTCGGG+TGG | + | chr3.4:63329828-63329847 | MS.gene38440:CDS | 55.0% |
| ! | TTTGAGACGTGAATCGGCGC+CGG | - | chr3.4:63329106-63329125 | None:intergenic | 55.0% |
| AATTCGCCGGAGGATCCGTC+TGG | + | chr3.4:63329306-63329325 | MS.gene38440:CDS | 60.0% | |
| AGTGAGGTGGGAGGTCCAAC+TGG | + | chr3.4:63334743-63334762 | MS.gene38440:CDS | 60.0% | |
| CAGGCCACTACATCTGGTGG+TGG | - | chr3.4:63332871-63332890 | None:intergenic | 60.0% | |
| CCACAGGCCACTACATCTGG+TGG | - | chr3.4:63332874-63332893 | None:intergenic | 60.0% | |
| CCACCAGATGTAGTGGCCTG+TGG | + | chr3.4:63332871-63332890 | MS.gene38440:intron | 60.0% | |
| CGACCAGGGGCCAAGACTTT+AGG | - | chr3.4:63334514-63334533 | None:intergenic | 60.0% | |
| CGGCGGTGAAGAGGATTTGG+AGG | + | chr3.4:63329340-63329359 | MS.gene38440:CDS | 60.0% | |
| CGGTGGGGGGAAGAGATTGA+AGG | + | chr3.4:63329402-63329421 | MS.gene38440:CDS | 60.0% | |
| GGGATTGAAGAACGCGGAGG+AGG | - | chr3.4:63329137-63329156 | None:intergenic | 60.0% | |
| ! | AGGAAGCGTGGGGGAGTATG+GGG | + | chr3.4:63329511-63329530 | MS.gene38440:CDS | 60.0% |
| ! | GAAGAGAATGGCTCGGGTGG+TGG | + | chr3.4:63329831-63329850 | MS.gene38440:CDS | 60.0% |
| ! | GAAGGAAGCGTGGGGGAGTA+TGG | + | chr3.4:63329509-63329528 | MS.gene38440:CDS | 60.0% |
| ! | GGGAATGGTTTGTGTCCGGG+AGG | + | chr3.4:63329570-63329589 | MS.gene38440:CDS | 60.0% |
| ! | GTCGGATGGGTTTGTGCGGT+GGG | + | chr3.4:63329386-63329405 | MS.gene38440:CDS | 60.0% |
| ! | TCGGATGGGTTTGTGCGGTG+GGG | + | chr3.4:63329387-63329406 | MS.gene38440:CDS | 60.0% |
| ! | TGTCGGATGGGTTTGTGCGG+TGG | + | chr3.4:63329385-63329404 | MS.gene38440:CDS | 60.0% |
| !! | GAACGGTGGTGTTACGGAGG+AGG | - | chr3.4:63329041-63329060 | None:intergenic | 60.0% |
| !! | GAGAGGGAGTGGGTTGGTGT+CGG | + | chr3.4:63329368-63329387 | MS.gene38440:CDS | 60.0% |
| !! | GGAGTGGGTTGGTGTCGGAT+GGG | + | chr3.4:63329373-63329392 | MS.gene38440:CDS | 60.0% |
| !! | GGGTTGCAGAGAGGTTGGTG+GGG | + | chr3.4:63329442-63329461 | MS.gene38440:CDS | 60.0% |
| GGAGGGGAAGGAGAGGGAGT+GGG | + | chr3.4:63329358-63329377 | MS.gene38440:CDS | 65.0% | |
| GGGAAGGAGAGGGAGTGGGT+TGG | + | chr3.4:63329362-63329381 | MS.gene38440:CDS | 65.0% | |
| TAGCGGAGAGCGACGCGTAG+CGG | - | chr3.4:63330845-63330864 | None:intergenic | 65.0% | |
| TGGAGGGGAAGGAGAGGGAG+TGG | + | chr3.4:63329357-63329376 | MS.gene38440:CDS | 65.0% | |
| ! | CGGATGGGTTTGTGCGGTGG+GGG | + | chr3.4:63329388-63329407 | MS.gene38440:CDS | 65.0% |
| ! | GGAAGCGTGGGGGAGTATGG+GGG | + | chr3.4:63329512-63329531 | MS.gene38440:CDS | 65.0% |
| ! | GGATGGGTTTGTGCGGTGGG+GGG | + | chr3.4:63329389-63329408 | MS.gene38440:CDS | 65.0% |
| ! | GGCGCCGGAGAGTGGAAGTA+GGG | - | chr3.4:63329091-63329110 | None:intergenic | 65.0% |
| !! | CGGGAACGGTGGTGTTACGG+AGG | - | chr3.4:63329044-63329063 | None:intergenic | 65.0% |
| !! | CGGGTGGTGGAATGTCGAGG+AGG | + | chr3.4:63329844-63329863 | MS.gene38440:CDS | 65.0% |
| !! | GCTCGGGTGGTGGAATGTCG+AGG | + | chr3.4:63329841-63329860 | MS.gene38440:CDS | 65.0% |
| !! | GGGAGTGGGTTGGTGTCGGA+TGG | + | chr3.4:63329372-63329391 | MS.gene38440:CDS | 65.0% |
| GCAGCGCTATAGCAGCCGCG+CGG | + | chr3.4:63330231-63330250 | MS.gene38440:intron | 70.0% | |
| GCTATAGCAGCCGCGCGGTG+CGG | + | chr3.4:63330236-63330255 | MS.gene38440:intron | 70.0% | |
| ! | CGGCGCCGGAGAGTGGAAGT+AGG | - | chr3.4:63329092-63329111 | None:intergenic | 70.0% |
| ! | CGTGAATCGGCGCCGGAGAG+TGG | - | chr3.4:63329099-63329118 | None:intergenic | 70.0% |
| CGCGCGGTGCGGTGTGGTAC+CGG | + | chr3.4:63330247-63330266 | MS.gene38440:intron | 75.0% | |
| CGGTACCACACCGCACCGCG+CGG | - | chr3.4:63330249-63330268 | None:intergenic | 75.0% | |
| ! | AGCAGCCGCGCGGTGCGGTG+TGG | + | chr3.4:63330241-63330260 | MS.gene38440:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 63329003 | 63334946 | 63329003 | ID=MS.gene38440 |
| chr3.4 | mRNA | 63329003 | 63334946 | 63329003 | ID=MS.gene38440.t1;Parent=MS.gene38440 |
| chr3.4 | exon | 63329003 | 63330047 | 63329003 | ID=MS.gene38440.t1.exon1;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63329003 | 63330047 | 63329003 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| chr3.4 | exon | 63331124 | 63331333 | 63331124 | ID=MS.gene38440.t1.exon2;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63331124 | 63331333 | 63331124 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| chr3.4 | exon | 63332073 | 63332566 | 63332073 | ID=MS.gene38440.t1.exon3;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63332073 | 63332566 | 63332073 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| chr3.4 | exon | 63333063 | 63333166 | 63333063 | ID=MS.gene38440.t1.exon4;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63333063 | 63333166 | 63333063 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| chr3.4 | exon | 63333303 | 63333369 | 63333303 | ID=MS.gene38440.t1.exon5;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63333303 | 63333369 | 63333303 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| chr3.4 | exon | 63334692 | 63334946 | 63334692 | ID=MS.gene38440.t1.exon6;Parent=MS.gene38440.t1 |
| chr3.4 | CDS | 63334692 | 63334946 | 63334692 | ID=cds.MS.gene38440.t1;Parent=MS.gene38440.t1 |
| Gene Sequence |
| Protein sequence |
