Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38572.t1 | XP_003602861.2 | 86.9 | 191 | 24 | 1 | 1 | 190 | 13 | 203 | 2.40E-79 | 305.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38572.t1 | Q9FZ96 | 51.1 | 190 | 90 | 1 | 1 | 190 | 1 | 187 | 2.1e-47 | 190.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38572.t1 | G7J4H6 | 86.9 | 191 | 24 | 1 | 1 | 190 | 13 | 203 | 1.7e-79 | 305.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051560 | MS.gene38572 | 0.82362 | 1.26E-53 | -1.69E-46 |
| MS.gene055629 | MS.gene38572 | 0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene058420 | MS.gene38572 | 0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene059517 | MS.gene38572 | 0.807181 | 5.73E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38572.t1 | MTR_3g099750 | 89.529 | 191 | 19 | 1 | 1 | 190 | 13 | 203 | 4.08e-119 | 342 |
| MS.gene38572.t1 | MTR_3g099740 | 85.340 | 191 | 27 | 1 | 1 | 190 | 14 | 204 | 1.08e-111 | 323 |
| MS.gene38572.t1 | MTR_5g065080 | 55.497 | 191 | 79 | 2 | 1 | 190 | 17 | 202 | 1.23e-59 | 190 |
| MS.gene38572.t1 | MTR_2g437590 | 36.316 | 190 | 105 | 2 | 2 | 189 | 67 | 242 | 1.26e-35 | 129 |
| MS.gene38572.t1 | MTR_3g058660 | 36.066 | 183 | 97 | 5 | 12 | 188 | 23 | 191 | 1.70e-24 | 98.6 |
| MS.gene38572.t1 | MTR_2g015470 | 31.892 | 185 | 116 | 2 | 4 | 188 | 42 | 216 | 2.55e-23 | 95.9 |
| MS.gene38572.t1 | MTR_2g437580 | 33.333 | 195 | 105 | 3 | 2 | 189 | 47 | 223 | 1.78e-22 | 93.6 |
| MS.gene38572.t1 | MTR_4g098900 | 34.783 | 184 | 101 | 5 | 11 | 187 | 42 | 213 | 9.70e-21 | 89.0 |
| MS.gene38572.t1 | MTR_7g080750 | 30.055 | 183 | 100 | 4 | 4 | 185 | 29 | 184 | 5.02e-19 | 83.6 |
| MS.gene38572.t1 | MTR_8g024620 | 28.495 | 186 | 116 | 2 | 5 | 190 | 43 | 211 | 1.66e-18 | 82.0 |
| MS.gene38572.t1 | MTR_8g024620 | 28.495 | 186 | 116 | 2 | 5 | 190 | 54 | 222 | 1.83e-18 | 82.0 |
| MS.gene38572.t1 | MTR_8g024620 | 28.495 | 186 | 116 | 2 | 5 | 190 | 55 | 223 | 1.84e-18 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38572.t1 | AT1G28220 | 51.053 | 190 | 84 | 1 | 1 | 190 | 1 | 181 | 9.55e-64 | 201 |
| MS.gene38572.t1 | AT1G28230 | 51.579 | 190 | 89 | 1 | 1 | 190 | 1 | 187 | 2.31e-55 | 179 |
| MS.gene38572.t1 | AT2G33750 | 48.947 | 190 | 88 | 1 | 1 | 190 | 3 | 183 | 3.58e-55 | 178 |
| MS.gene38572.t1 | AT2G33750 | 48.947 | 190 | 88 | 1 | 1 | 190 | 3 | 183 | 6.25e-55 | 178 |
| MS.gene38572.t1 | AT4G18205 | 37.278 | 169 | 95 | 3 | 20 | 188 | 56 | 213 | 9.64e-25 | 99.8 |
| MS.gene38572.t1 | AT4G18195 | 33.511 | 188 | 113 | 4 | 2 | 188 | 43 | 219 | 5.80e-24 | 97.8 |
| MS.gene38572.t1 | AT4G18220 | 36.416 | 173 | 97 | 4 | 16 | 188 | 57 | 216 | 1.94e-23 | 96.3 |
| MS.gene38572.t1 | AT1G30840 | 35.135 | 185 | 107 | 3 | 5 | 189 | 27 | 198 | 3.20e-23 | 95.5 |
| MS.gene38572.t1 | AT1G30840 | 35.135 | 185 | 107 | 3 | 5 | 189 | 27 | 198 | 3.20e-23 | 95.5 |
| MS.gene38572.t1 | AT4G18210 | 34.682 | 173 | 100 | 3 | 16 | 188 | 57 | 216 | 7.65e-20 | 86.3 |
| MS.gene38572.t1 | AT4G18197 | 36.686 | 169 | 96 | 3 | 20 | 188 | 59 | 216 | 5.23e-18 | 81.3 |
| MS.gene38572.t1 | AT1G44750 | 29.050 | 179 | 113 | 1 | 5 | 183 | 33 | 197 | 1.87e-17 | 79.3 |
| MS.gene38572.t1 | AT1G44750 | 29.050 | 179 | 113 | 1 | 5 | 183 | 33 | 197 | 1.87e-17 | 79.3 |
| MS.gene38572.t1 | AT1G44750 | 30.726 | 179 | 110 | 1 | 5 | 183 | 45 | 209 | 2.14e-17 | 79.3 |
| MS.gene38572.t1 | AT4G18190 | 34.254 | 181 | 104 | 4 | 12 | 188 | 44 | 213 | 9.16e-17 | 77.4 |
| MS.gene38572.t1 | AT4G08700 | 28.070 | 171 | 106 | 2 | 20 | 190 | 52 | 205 | 3.23e-15 | 73.2 |
| MS.gene38572.t1 | AT1G44750 | 38.202 | 89 | 55 | 0 | 95 | 183 | 45 | 133 | 7.18e-15 | 71.6 |
| MS.gene38572.t1 | AT1G44750 | 38.202 | 89 | 55 | 0 | 95 | 183 | 45 | 133 | 7.18e-15 | 71.6 |
| MS.gene38572.t1 | AT1G44750 | 38.202 | 89 | 55 | 0 | 95 | 183 | 45 | 133 | 7.18e-15 | 71.6 |
| MS.gene38572.t1 | AT1G44750 | 38.202 | 89 | 55 | 0 | 95 | 183 | 45 | 133 | 7.18e-15 | 71.6 |
| MS.gene38572.t1 | AT1G44750 | 38.202 | 89 | 55 | 0 | 95 | 183 | 45 | 133 | 7.18e-15 | 71.6 |
| MS.gene38572.t1 | AT5G41160 | 27.219 | 169 | 109 | 2 | 22 | 190 | 54 | 208 | 6.34e-14 | 69.3 |
Find 55 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGGTTGGTTCTGGTGTTT+TGG | 0.295285 | 3.2:+82793239 | MS.gene38572:CDS |
| AAGCTGAGATGCTATTATTA+AGG | 0.319246 | 3.2:-82793139 | None:intergenic |
| TGGTGGATGGTGGAGGATGG+TGG | 0.364115 | 3.2:-82792975 | None:intergenic |
| TCCACGGCGGCCAACGTGTC+TGG | 0.372039 | 3.2:+82792869 | MS.gene38572:CDS |
| AATGAGCATCAAGGGGAAAC+TGG | 0.387179 | 3.2:-82792914 | None:intergenic |
| TCAAGGGGAAACTGGCGGTT+TGG | 0.389802 | 3.2:-82792906 | None:intergenic |
| ATGGAGATGGTGGTGGATGG+TGG | 0.398618 | 3.2:-82792985 | None:intergenic |
| ATTAAGGAACCAGTGGAAAC+TGG | 0.398731 | 3.2:-82793123 | None:intergenic |
| TCTTCGCATATGGCGTTGCT+CGG | 0.418830 | 3.2:+82793097 | MS.gene38572:CDS |
| TGGTGGTGGATGGTGGAGGA+TGG | 0.424033 | 3.2:-82792978 | None:intergenic |
| TTCTTCGCAGCCGCCTTCAT+CGG | 0.427701 | 3.2:+82793048 | MS.gene38572:CDS |
| TGGATGGTGGAGGATGGTGG+TGG | 0.430332 | 3.2:-82792972 | None:intergenic |
| TTCTGTGATGGAGATGGTGG+TGG | 0.432880 | 3.2:-82792992 | None:intergenic |
| GCTCGGCTTCCAGTTTCCAC+TGG | 0.458963 | 3.2:+82793114 | MS.gene38572:CDS |
| GAAGAAAATAGAAGGTTTCA+TGG | 0.460569 | 3.2:-82793031 | None:intergenic |
| GGGGAGCACCGGAGGTACCT+AGG | 0.461356 | 3.2:-82792825 | None:intergenic |
| GACGACTATCTCTTCGCATA+TGG | 0.467374 | 3.2:+82793087 | MS.gene38572:CDS |
| GTGGAGGATGGTGGTGGAGA+CGG | 0.467478 | 3.2:-82792966 | None:intergenic |
| TGAAATAGAGACGCATTATG+AGG | 0.471366 | 3.2:-82792846 | None:intergenic |
| GCCGGTGAGGATTCCGATGA+AGG | 0.474028 | 3.2:-82793061 | None:intergenic |
| GAGATGGTGGTGGATGGTGG+AGG | 0.481262 | 3.2:-82792982 | None:intergenic |
| AGGGGAAACTGGCGGTTTGG+AGG | 0.487139 | 3.2:-82792903 | None:intergenic |
| GTGATGGAGATGGTGGTGGA+TGG | 0.491847 | 3.2:-82792988 | None:intergenic |
| GAAACTGGCGGTTTGGAGGA+AGG | 0.498472 | 3.2:-82792899 | None:intergenic |
| GCGGCTGCGAAGAAAATAGA+AGG | 0.499053 | 3.2:-82793039 | None:intergenic |
| GGGAGCACCGGAGGTACCTA+GGG | 0.520001 | 3.2:-82792824 | None:intergenic |
| TGCGAGGGGAATGAGCATCA+AGG | 0.523525 | 3.2:-82792923 | None:intergenic |
| ACGAGTAGTGATCGTCCTGC+TGG | 0.534270 | 3.2:+82793270 | MS.gene38572:CDS |
| GCCAGACACGTTGGCCGCCG+TGG | 0.541479 | 3.2:-82792870 | None:intergenic |
| ACGCATTATGAGGGGAGCAC+CGG | 0.545670 | 3.2:-82792836 | None:intergenic |
| GAAATAGAGACGCATTATGA+GGG | 0.548591 | 3.2:-82792845 | None:intergenic |
| TTAATAATAGCATCTCAGCT+TGG | 0.557663 | 3.2:+82793141 | MS.gene38572:CDS |
| ATGTTAGCCCTAGGTACCTC+CGG | 0.565369 | 3.2:+82792817 | MS.gene38572:CDS |
| TGCTATTATTAAGGAACCAG+TGG | 0.565701 | 3.2:-82793130 | None:intergenic |
| AATTGTCTCATGTTAGCCCT+AGG | 0.571570 | 3.2:+82792808 | MS.gene38572:CDS |
| GCGAGGGGAATGAGCATCAA+GGG | 0.578405 | 3.2:-82792922 | None:intergenic |
| GCCTTCATCGGAATCCTCAC+CGG | 0.585533 | 3.2:+82793060 | MS.gene38572:CDS |
| TGAGACAATTTACTATCAGA+AGG | 0.586602 | 3.2:-82792795 | None:intergenic |
| CATTATGAGGGGAGCACCGG+AGG | 0.606065 | 3.2:-82792833 | None:intergenic |
| ATGCGTCTCTATTTCATCCA+CGG | 0.610236 | 3.2:+82792853 | MS.gene38572:CDS |
| GAAGAGATAGTCGTCAAGGC+CGG | 0.619969 | 3.2:-82793079 | None:intergenic |
| GTATGATGTATGAGATTGCG+AGG | 0.623652 | 3.2:-82792939 | None:intergenic |
| ATGCGAAGAGATAGTCGTCA+AGG | 0.632876 | 3.2:-82793083 | None:intergenic |
| TATGATGTATGAGATTGCGA+GGG | 0.643247 | 3.2:-82792938 | None:intergenic |
| CAATGCAGAAGCAGCAACCG+TGG | 0.648575 | 3.2:-82793328 | None:intergenic |
| GGTGAGGATTCCGATGAAGG+CGG | 0.655496 | 3.2:-82793058 | None:intergenic |
| ACCAACCGTAAGCAAAACAA+TGG | 0.657982 | 3.2:-82793226 | None:intergenic |
| CGAGGGGAATGAGCATCAAG+GGG | 0.659390 | 3.2:-82792921 | None:intergenic |
| ACTGGCGGTTTGGAGGAAGG+CGG | 0.661208 | 3.2:-82792896 | None:intergenic |
| AAATAGAGACGCATTATGAG+GGG | 0.661247 | 3.2:-82792844 | None:intergenic |
| AGGCGGAGAGCCAGACACGT+TGG | 0.665988 | 3.2:-82792879 | None:intergenic |
| GATAGTCGTCAAGGCCGGTG+AGG | 0.690358 | 3.2:-82793074 | None:intergenic |
| GAGCATCAAGGGGAAACTGG+CGG | 0.694601 | 3.2:-82792911 | None:intergenic |
| ATGATGTATGAGATTGCGAG+GGG | 0.708086 | 3.2:-82792937 | None:intergenic |
| CGTCTCTATTTCATCCACGG+CGG | 0.772458 | 3.2:+82792856 | MS.gene38572:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTAGTTTTTCTGTGA+TGG | - | chr3.2:82793007-82793026 | None:intergenic | 20.0% |
| ! | ATAACAAGAGAATAAGTGAT+GGG | - | chr3.2:82793405-82793424 | None:intergenic | 25.0% |
| AAGCTGAGATGCTATTATTA+AGG | - | chr3.2:82793142-82793161 | None:intergenic | 30.0% | |
| CATAACAAGAGAATAAGTGA+TGG | - | chr3.2:82793406-82793425 | None:intergenic | 30.0% | |
| CATCACTTATTCTCTTGTTA+TGG | + | chr3.2:82793404-82793423 | MS.gene38572:intron | 30.0% | |
| GAAGAAAATAGAAGGTTTCA+TGG | - | chr3.2:82793034-82793053 | None:intergenic | 30.0% | |
| TGAGACAATTTACTATCAGA+AGG | - | chr3.2:82792798-82792817 | None:intergenic | 30.0% | |
| TTAATAATAGCATCTCAGCT+TGG | + | chr3.2:82793141-82793160 | MS.gene38572:CDS | 30.0% | |
| AAATAGAGACGCATTATGAG+GGG | - | chr3.2:82792847-82792866 | None:intergenic | 35.0% | |
| AAGAAGAAAAGCGAAAAACG+CGG | - | chr3.2:82793172-82793191 | None:intergenic | 35.0% | |
| GAAATAGAGACGCATTATGA+GGG | - | chr3.2:82792848-82792867 | None:intergenic | 35.0% | |
| TATGATGTATGAGATTGCGA+GGG | - | chr3.2:82792941-82792960 | None:intergenic | 35.0% | |
| TGAAATAGAGACGCATTATG+AGG | - | chr3.2:82792849-82792868 | None:intergenic | 35.0% | |
| TGCTATTATTAAGGAACCAG+TGG | - | chr3.2:82793133-82793152 | None:intergenic | 35.0% | |
| TTATAAACCAACTCAACCGA+AGG | - | chr3.2:82793369-82793388 | None:intergenic | 35.0% | |
| !! | AAACGCCATTGTTTTGCTTA+CGG | + | chr3.2:82793221-82793240 | MS.gene38572:CDS | 35.0% |
| !! | TAGTTTTTCTGTGATGGAGA+TGG | - | chr3.2:82793001-82793020 | None:intergenic | 35.0% |
| !!! | GTATGGATTTGTTTTGCCTT+CGG | + | chr3.2:82793350-82793369 | MS.gene38572:intron | 35.0% |
| !!! | TGCGATTAGTTTTTCAACCA+CGG | + | chr3.2:82793311-82793330 | MS.gene38572:CDS | 35.0% |
| AATTGTCTCATGTTAGCCCT+AGG | + | chr3.2:82792808-82792827 | MS.gene38572:CDS | 40.0% | |
| ACCAACCGTAAGCAAAACAA+TGG | - | chr3.2:82793229-82793248 | None:intergenic | 40.0% | |
| ATGATGTATGAGATTGCGAG+GGG | - | chr3.2:82792940-82792959 | None:intergenic | 40.0% | |
| ATGCGTCTCTATTTCATCCA+CGG | + | chr3.2:82792853-82792872 | MS.gene38572:CDS | 40.0% | |
| ATTAAGGAACCAGTGGAAAC+TGG | - | chr3.2:82793126-82793145 | None:intergenic | 40.0% | |
| GTATGATGTATGAGATTGCG+AGG | - | chr3.2:82792942-82792961 | None:intergenic | 40.0% | |
| !! | TTTTTCTGTGATGGAGATGG+TGG | - | chr3.2:82792998-82793017 | None:intergenic | 40.0% |
| AATGAGCATCAAGGGGAAAC+TGG | - | chr3.2:82792917-82792936 | None:intergenic | 45.0% | |
| ATGCGAAGAGATAGTCGTCA+AGG | - | chr3.2:82793086-82793105 | None:intergenic | 45.0% | |
| GACGACTATCTCTTCGCATA+TGG | + | chr3.2:82793087-82793106 | MS.gene38572:CDS | 45.0% | |
| ! | GTTGCTGCTTCTGCATTGTA+TGG | + | chr3.2:82793333-82793352 | MS.gene38572:intron | 45.0% |
| ! | TGTTTTGCAGAAACACCAGC+AGG | - | chr3.2:82793288-82793307 | None:intergenic | 45.0% |
| ! | TGTTTTGCCTTCGGTTGAGT+TGG | + | chr3.2:82793359-82793378 | MS.gene38572:intron | 45.0% |
| !! | GCCATTGTTTTGCTTACGGT+TGG | + | chr3.2:82793225-82793244 | MS.gene38572:CDS | 45.0% |
| !! | GTTTTGCTTACGGTTGGTTC+TGG | + | chr3.2:82793231-82793250 | MS.gene38572:CDS | 45.0% |
| !!! | TACGGTTGGTTCTGGTGTTT+TGG | + | chr3.2:82793239-82793258 | MS.gene38572:CDS | 45.0% |
| ATGTTAGCCCTAGGTACCTC+CGG | + | chr3.2:82792817-82792836 | MS.gene38572:CDS | 50.0% | |
| CGTCTCTATTTCATCCACGG+CGG | + | chr3.2:82792856-82792875 | MS.gene38572:CDS | 50.0% | |
| GAAGAGATAGTCGTCAAGGC+CGG | - | chr3.2:82793082-82793101 | None:intergenic | 50.0% | |
| GCCACTCTCTTCTGTGCTAT+AGG | + | chr3.2:82793453-82793472 | MS.gene38572:intron | 50.0% | |
| GCCTATAGCACAGAAGAGAG+TGG | - | chr3.2:82793457-82793476 | None:intergenic | 50.0% | |
| GCGGCTGCGAAGAAAATAGA+AGG | - | chr3.2:82793042-82793061 | None:intergenic | 50.0% | |
| TCTTCGCATATGGCGTTGCT+CGG | + | chr3.2:82793097-82793116 | MS.gene38572:CDS | 50.0% | |
| ! | TTCTGTGATGGAGATGGTGG+TGG | - | chr3.2:82792995-82793014 | None:intergenic | 50.0% |
| ACGAGTAGTGATCGTCCTGC+TGG | + | chr3.2:82793270-82793289 | MS.gene38572:CDS | 55.0% | |
| CAATGCAGAAGCAGCAACCG+TGG | - | chr3.2:82793331-82793350 | None:intergenic | 55.0% | |
| CGAGGGGAATGAGCATCAAG+GGG | - | chr3.2:82792924-82792943 | None:intergenic | 55.0% | |
| GAGCATCAAGGGGAAACTGG+CGG | - | chr3.2:82792914-82792933 | None:intergenic | 55.0% | |
| GCCTTCATCGGAATCCTCAC+CGG | + | chr3.2:82793060-82793079 | MS.gene38572:CDS | 55.0% | |
| GCGAGGGGAATGAGCATCAA+GGG | - | chr3.2:82792925-82792944 | None:intergenic | 55.0% | |
| GGTGAGGATTCCGATGAAGG+CGG | - | chr3.2:82793061-82793080 | None:intergenic | 55.0% | |
| TCAAGGGGAAACTGGCGGTT+TGG | - | chr3.2:82792909-82792928 | None:intergenic | 55.0% | |
| TGCGAGGGGAATGAGCATCA+AGG | - | chr3.2:82792926-82792945 | None:intergenic | 55.0% | |
| TTCTTCGCAGCCGCCTTCAT+CGG | + | chr3.2:82793048-82793067 | MS.gene38572:CDS | 55.0% | |
| ! | ACGCATTATGAGGGGAGCAC+CGG | - | chr3.2:82792839-82792858 | None:intergenic | 55.0% |
| ! | GAAACTGGCGGTTTGGAGGA+AGG | - | chr3.2:82792902-82792921 | None:intergenic | 55.0% |
| !! | ATGGAGATGGTGGTGGATGG+TGG | - | chr3.2:82792988-82793007 | None:intergenic | 55.0% |
| !! | GTGATGGAGATGGTGGTGGA+TGG | - | chr3.2:82792991-82793010 | None:intergenic | 55.0% |
| GATAGTCGTCAAGGCCGGTG+AGG | - | chr3.2:82793077-82793096 | None:intergenic | 60.0% | |
| GCCGGTGAGGATTCCGATGA+AGG | - | chr3.2:82793064-82793083 | None:intergenic | 60.0% | |
| GCTCGGCTTCCAGTTTCCAC+TGG | + | chr3.2:82793114-82793133 | MS.gene38572:CDS | 60.0% | |
| ! | ACTGGCGGTTTGGAGGAAGG+CGG | - | chr3.2:82792899-82792918 | None:intergenic | 60.0% |
| ! | AGGGGAAACTGGCGGTTTGG+AGG | - | chr3.2:82792906-82792925 | None:intergenic | 60.0% |
| !! | CATTATGAGGGGAGCACCGG+AGG | - | chr3.2:82792836-82792855 | None:intergenic | 60.0% |
| !! | GAGATGGTGGTGGATGGTGG+AGG | - | chr3.2:82792985-82793004 | None:intergenic | 60.0% |
| !! | GTGGAGGATGGTGGTGGAGA+CGG | - | chr3.2:82792969-82792988 | None:intergenic | 60.0% |
| !! | TGGATGGTGGAGGATGGTGG+TGG | - | chr3.2:82792975-82792994 | None:intergenic | 60.0% |
| !! | TGGTGGATGGTGGAGGATGG+TGG | - | chr3.2:82792978-82792997 | None:intergenic | 60.0% |
| !! | TGGTGGTGGATGGTGGAGGA+TGG | - | chr3.2:82792981-82793000 | None:intergenic | 60.0% |
| AGGCGGAGAGCCAGACACGT+TGG | - | chr3.2:82792882-82792901 | None:intergenic | 65.0% | |
| !! | GGGAGCACCGGAGGTACCTA+GGG | - | chr3.2:82792827-82792846 | None:intergenic | 65.0% |
| TCCACGGCGGCCAACGTGTC+TGG | + | chr3.2:82792869-82792888 | MS.gene38572:CDS | 70.0% | |
| !! | GGGGAGCACCGGAGGTACCT+AGG | - | chr3.2:82792828-82792847 | None:intergenic | 70.0% |
| GCCAGACACGTTGGCCGCCG+TGG | - | chr3.2:82792873-82792892 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 82792784 | 82793493 | 82792784 | ID=MS.gene38572 |
| chr3.2 | mRNA | 82792784 | 82793493 | 82792784 | ID=MS.gene38572.t1;Parent=MS.gene38572 |
| chr3.2 | exon | 82792784 | 82793349 | 82792784 | ID=MS.gene38572.t1.exon1;Parent=MS.gene38572.t1 |
| chr3.2 | CDS | 82792784 | 82793349 | 82792784 | ID=cds.MS.gene38572.t1;Parent=MS.gene38572.t1 |
| chr3.2 | exon | 82793475 | 82793493 | 82793475 | ID=MS.gene38572.t1.exon2;Parent=MS.gene38572.t1 |
| chr3.2 | CDS | 82793475 | 82793493 | 82793475 | ID=cds.MS.gene38572.t1;Parent=MS.gene38572.t1 |
| Gene Sequence |
| Protein sequence |
