Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051560.t1 | QDC27833.1 | 100 | 405 | 0 | 0 | 1 | 405 | 1 | 405 | 1.20E-237 | 832 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051560.t1 | Q9FUJ1 | 61.0 | 421 | 148 | 4 | 1 | 405 | 1 | 421 | 3.5e-145 | 516.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051560.t1 | A0A4Y5UJA3 | 100.0 | 405 | 0 | 0 | 1 | 405 | 1 | 405 | 8.6e-238 | 832.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050577 | MS.gene051560 | 0.832602 | 8.61E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene051560 | 0.801725 | 7.86E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene051560 | 0.806488 | 8.03E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene052164 | 0.816079 | 6.65E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene052482 | 0.831564 | 1.55E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene052486 | 0.83757 | 4.81E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene053203 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene053626 | 0.812243 | 4.68E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene054595 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene055629 | 0.81289 | 3.38E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene056040 | 0.801497 | 8.76E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene056504 | 0.813136 | 2.98E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene05787 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene058157 | 0.807165 | 5.78E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene058173 | -0.800812 | 1.21E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene058420 | 0.835223 | 1.90E-56 | -1.69E-46 |
| MS.gene051560 | MS.gene059223 | -0.812756 | 3.61E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene059367 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene059865 | 0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene06000 | 0.825023 | 5.88E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene060295 | 0.807347 | 5.28E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene060778 | 0.829078 | 6.29E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene06077 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene060982 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene061556 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene061731 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene061862 | 0.807366 | 5.24E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene062923 | 0.822898 | 1.85E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene062925 | 0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene063410 | 0.814293 | 1.66E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene06346 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene064148 | 0.826789 | 2.24E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene064283 | 0.801231 | 9.92E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene064294 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene064435 | 0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene064707 | 0.854766 | 9.89E-62 | -1.69E-46 |
| MS.gene051560 | MS.gene065360 | 0.817353 | 3.45E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene065540 | 0.824061 | 9.90E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene066003 | 0.805444 | 1.33E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene067467 | 0.817918 | 2.57E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene06750 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene067713 | 0.833174 | 6.20E-56 | -1.69E-46 |
| MS.gene051560 | MS.gene067954 | 0.806342 | 8.62E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene068299 | -0.803485 | 3.41E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene069352 | 0.807956 | 3.92E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene072303 | 0.800772 | 1.23E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene072875 | 0.817409 | 3.35E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene073118 | 0.815219 | 1.03E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene07329 | 0.84452 | 7.19E-59 | -1.69E-46 |
| MS.gene051560 | MS.gene073640 | 0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene073883 | 0.816342 | 5.81E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene074598 | 0.835428 | 1.69E-56 | -1.69E-46 |
| MS.gene051560 | MS.gene07792 | -0.819214 | 1.31E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene08253 | 0.817818 | 2.71E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene08254 | 0.814794 | 1.28E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene09022 | -0.803651 | 3.15E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene09053 | 0.836933 | 7.00E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene09193 | 0.83318 | 6.18E-56 | -1.69E-46 |
| MS.gene051560 | MS.gene09797 | 0.807398 | 5.16E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene20594 | 0.843294 | 1.53E-58 | -1.69E-46 |
| MS.gene051560 | MS.gene20878 | 0.846815 | 1.71E-59 | -1.69E-46 |
| MS.gene051560 | MS.gene22869 | 0.839136 | 1.90E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene23217 | 0.870001 | 2.03E-66 | -1.69E-46 |
| MS.gene051560 | MS.gene23219 | 0.868682 | 5.44E-66 | -1.69E-46 |
| MS.gene051560 | MS.gene23254 | 0.870594 | 1.30E-66 | -1.69E-46 |
| MS.gene051560 | MS.gene23350 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene23352 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene24272 | -0.80366 | 3.14E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene24562 | 0.82453 | 7.68E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene24977 | -0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene27308 | -0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene27583 | 0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene28073 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene30743 | 0.812139 | 4.93E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene31106 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene31869 | 0.802014 | 6.86E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene32652 | 0.839103 | 1.94E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene32996 | 0.819855 | 9.33E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene33043 | 0.975437 | 5.96E-140 | -1.69E-46 |
| MS.gene051560 | MS.gene33174 | -0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene34025 | 0.812439 | 4.24E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene34171 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene34554 | 0.817836 | 2.68E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene36203 | 0.831444 | 1.66E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene38094 | -0.807011 | 6.22E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene38172 | -0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene38174 | -0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene38309 | 0.838254 | 3.21E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene38572 | 0.82362 | 1.26E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene40101 | 0.811208 | 7.86E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene40943 | 0.803437 | 3.49E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene42301 | 0.849156 | 3.87E-60 | -1.69E-46 |
| MS.gene051560 | MS.gene42383 | -0.80856 | 2.92E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene42674 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene42884 | 0.803745 | 3.01E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene44440 | 0.800118 | 1.67E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene44721 | -0.819141 | 1.36E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene44722 | -0.823448 | 1.38E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene45854 | -0.826036 | 3.38E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene47951 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene47989 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene48646 | 0.808102 | 3.65E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene48921 | -0.819445 | 1.16E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene50709 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene50712 | 0.819718 | 1.00E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene52444 | 0.983358 | 1.59E-157 | -1.69E-46 |
| MS.gene051560 | MS.gene53595 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene54068 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene54413 | 0.823657 | 1.23E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene54718 | 0.848855 | 4.70E-60 | -1.69E-46 |
| MS.gene051560 | MS.gene55013 | -0.801926 | 7.15E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene55731 | 0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene56598 | 0.804836 | 1.78E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene57140 | 0.849266 | 3.61E-60 | -1.69E-46 |
| MS.gene051560 | MS.gene57239 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene58416 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene58983 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene60360 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene63749 | -0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene63788 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene64347 | 0.811076 | 8.39E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene66210 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene68529 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene68625 | 0.827768 | 1.30E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene68980 | 0.831959 | 1.24E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene69130 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene69132 | 0.828671 | 7.90E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene69450 | 0.855824 | 4.87E-62 | -1.69E-46 |
| MS.gene051560 | MS.gene69468 | 0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene70809 | 0.800175 | 1.63E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene71059 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene71267 | 0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene71268 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene71651 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene72055 | 0.808492 | 3.02E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene73493 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene73545 | 0.800516 | 1.39E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene73688 | -0.802055 | 6.73E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene76840 | 0.813853 | 2.07E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene78281 | 0.801981 | 6.96E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene80239 | 0.816981 | 4.18E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene81067 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene82917 | 0.823467 | 1.36E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene83251 | 0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene83591 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene85956 | 0.817734 | 2.83E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene86071 | 0.840021 | 1.12E-57 | -1.69E-46 |
| MS.gene051560 | MS.gene86293 | 0.808613 | 2.84E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene86993 | 0.816074 | 6.67E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene87473 | 0.805476 | 1.31E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene89722 | 0.832153 | 1.11E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene90269 | 0.840293 | 9.49E-58 | -1.69E-46 |
| MS.gene051560 | MS.gene90685 | -0.81329 | 2.76E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene91973 | -0.810116 | 1.35E-50 | -1.69E-46 |
| MS.gene051560 | MS.gene91976 | -0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene051560 | MS.gene91977 | -0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene92042 | 0.810864 | 9.33E-51 | -1.69E-46 |
| MS.gene051560 | MS.gene92618 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene93265 | 0.860618 | 1.82E-63 | -1.69E-46 |
| MS.gene051560 | MS.gene93362 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene94628 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene95289 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene051560 | MS.gene97656 | 0.817383 | 3.39E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051560.t1 | MTR_1g015410 | 98.272 | 405 | 7 | 0 | 1 | 405 | 1 | 405 | 0.0 | 825 |
| MS.gene051560.t1 | MTR_7g090920 | 45.387 | 401 | 194 | 9 | 18 | 405 | 49 | 437 | 1.26e-114 | 346 |
| MS.gene051560.t1 | MTR_3g036100 | 46.316 | 380 | 184 | 7 | 37 | 408 | 81 | 448 | 4.40e-114 | 344 |
| MS.gene051560.t1 | MTR_4g044110 | 45.358 | 377 | 187 | 6 | 37 | 405 | 57 | 422 | 6.51e-112 | 338 |
| MS.gene051560.t1 | MTR_3g112350 | 48.011 | 377 | 182 | 9 | 37 | 405 | 57 | 427 | 1.60e-106 | 325 |
| MS.gene051560.t1 | MTR_2g039410 | 43.147 | 394 | 194 | 9 | 36 | 405 | 53 | 440 | 5.47e-101 | 310 |
| MS.gene051560.t1 | MTR_4g126150 | 40.441 | 408 | 211 | 11 | 17 | 405 | 37 | 431 | 1.65e-98 | 304 |
| MS.gene051560.t1 | MTR_4g126160 | 43.342 | 383 | 194 | 12 | 35 | 405 | 52 | 423 | 1.66e-93 | 290 |
| MS.gene051560.t1 | MTR_2g039340 | 39.675 | 431 | 214 | 12 | 1 | 405 | 16 | 426 | 6.36e-91 | 284 |
| MS.gene051560.t1 | MTR_0005s0070 | 46.792 | 265 | 123 | 5 | 50 | 306 | 1 | 255 | 1.32e-79 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051560.t1 | AT5G21482 | 61.045 | 421 | 148 | 4 | 1 | 405 | 1 | 421 | 0.0 | 514 |
| MS.gene051560.t1 | AT2G41510 | 45.522 | 402 | 196 | 9 | 16 | 405 | 50 | 440 | 3.62e-114 | 341 |
| MS.gene051560.t1 | AT2G41510 | 46.011 | 376 | 189 | 7 | 38 | 408 | 77 | 443 | 1.16e-112 | 342 |
| MS.gene051560.t1 | AT2G41510 | 46.011 | 376 | 189 | 7 | 38 | 408 | 139 | 505 | 2.65e-112 | 343 |
| MS.gene051560.t1 | AT1G75450 | 47.792 | 385 | 186 | 11 | 29 | 405 | 44 | 421 | 2.58e-108 | 329 |
| MS.gene051560.t1 | AT3G63440 | 45.767 | 378 | 186 | 7 | 37 | 405 | 60 | 427 | 2.01e-107 | 327 |
| MS.gene051560.t1 | AT1G75450 | 47.668 | 386 | 186 | 12 | 29 | 405 | 40 | 418 | 1.47e-106 | 325 |
| MS.gene051560.t1 | AT5G56970 | 44.086 | 372 | 199 | 6 | 37 | 405 | 58 | 423 | 2.61e-100 | 305 |
| MS.gene051560.t1 | AT5G56970 | 44.086 | 372 | 199 | 6 | 37 | 405 | 58 | 423 | 3.97e-99 | 305 |
| MS.gene051560.t1 | AT4G29740 | 40.155 | 386 | 209 | 8 | 35 | 405 | 50 | 428 | 4.67e-86 | 268 |
| MS.gene051560.t1 | AT2G19500 | 40.267 | 375 | 208 | 8 | 35 | 405 | 43 | 405 | 4.66e-85 | 268 |
| MS.gene051560.t1 | AT4G29740 | 40.155 | 386 | 209 | 8 | 35 | 405 | 50 | 428 | 1.47e-84 | 268 |
| MS.gene051560.t1 | AT4G29740 | 41.319 | 288 | 150 | 6 | 35 | 309 | 50 | 331 | 3.68e-64 | 210 |
Find 133 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAACCGGGTTGAAAATT+TGG | 0.149145 | 1.3:+6623803 | None:intergenic |
| TCTTTACTAGCGATGGAATT+AGG | 0.152257 | 1.3:+6624764 | None:intergenic |
| CGCCATGGCTTGGCCGTTGA+TGG | 0.241138 | 1.3:+6624610 | None:intergenic |
| ATAATTTGAATTACCATATC+AGG | 0.263814 | 1.3:+6624194 | None:intergenic |
| ACGTTTCCGGTGGGGCATTA+TGG | 0.267117 | 1.3:-6624505 | MS.gene051560:CDS |
| TTTGCTTCACTTGGTGGTCT+TGG | 0.275872 | 1.3:-6624263 | MS.gene051560:CDS |
| CTTTACTAGCGATGGAATTA+GGG | 0.278545 | 1.3:+6624765 | None:intergenic |
| GTTCCACACGTCGACGTTTC+CGG | 0.291921 | 1.3:-6624518 | MS.gene051560:CDS |
| TACCTTGAACACTTCGTTCA+TGG | 0.302711 | 1.3:-6624851 | MS.gene051560:CDS |
| AGCTTGTTGAAGAACGATTC+TGG | 0.307035 | 1.3:+6624217 | None:intergenic |
| ACCACATCGGCGGTGGTGTA+AGG | 0.326905 | 1.3:+6624698 | None:intergenic |
| AACGGCAAACGTAACGGAAT+TGG | 0.333855 | 1.3:-6624348 | MS.gene051560:CDS |
| CGTTTCCGGTGGGGCATTAT+GGG | 0.338199 | 1.3:-6624504 | MS.gene051560:CDS |
| GCGGAGTACGGCGAGGGGAG+TGG | 0.353548 | 1.3:+6624721 | None:intergenic |
| TCCGTTACGTTTGCCGTTTG+AGG | 0.363428 | 1.3:+6624353 | None:intergenic |
| CTTGGTGGTCTTGGTCAGTT+TGG | 0.364537 | 1.3:-6624254 | MS.gene051560:CDS |
| GTTTGTCTTCCTTCTTCAGC+TGG | 0.373201 | 1.3:-6623787 | MS.gene051560:CDS |
| TAATCAAAACCGTCACCTTC+TGG | 0.374704 | 1.3:+6623898 | None:intergenic |
| ACGGAATTGGAAGTTGTTAC+TGG | 0.376042 | 1.3:-6624335 | MS.gene051560:CDS |
| TCTTCAACAAGCTCCTGATA+TGG | 0.379699 | 1.3:-6624207 | MS.gene051560:intron |
| AAAATCAGCAATGTCGGTCT+TGG | 0.394703 | 1.3:+6621322 | None:intergenic |
| CGCCGCCACTGTTAAATTTG+TGG | 0.405726 | 1.3:+6624649 | None:intergenic |
| GTCCTTTCTCCGCCATGGCT+TGG | 0.407600 | 1.3:+6624600 | None:intergenic |
| AAGTGGATAGATTGCTTGGA+GGG | 0.409011 | 1.3:-6621484 | MS.gene051560:CDS |
| TCTTCCTTCTTCAGCTGGTC+CGG | 0.411612 | 1.3:-6623782 | MS.gene051560:CDS |
| AGGTCGTGGACGGATTATCT+TGG | 0.416052 | 1.3:-6624437 | MS.gene051560:CDS |
| AGAGATGAAACGTCGTCGTT+TGG | 0.424313 | 1.3:+6624809 | None:intergenic |
| TTCCATGAACGAAGTGTTCA+AGG | 0.426707 | 1.3:+6624849 | None:intergenic |
| ATGCTAAAGCCAAAGGCATA+TGG | 0.427796 | 1.3:-6621379 | MS.gene051560:CDS |
| TTGGAAGTTGTTACTGGTAA+AGG | 0.428929 | 1.3:-6624329 | MS.gene051560:CDS |
| GGTGATTTACTCGGAATTTG+AGG | 0.430629 | 1.3:-6623956 | MS.gene051560:CDS |
| AGGTGCATCCCATATGCCTT+TGG | 0.432243 | 1.3:+6621370 | None:intergenic |
| CGATGGAATTAGGGGCGAAA+TGG | 0.432931 | 1.3:+6624774 | None:intergenic |
| AGTGGTCAGACTTTCCGTTA+TGG | 0.435886 | 1.3:-6624377 | MS.gene051560:CDS |
| AATTATAGGTGAGGTGGATG+AGG | 0.449429 | 1.3:-6623978 | MS.gene051560:intron |
| GCTGAAGAAGGAAGACAAAC+CGG | 0.451857 | 1.3:+6623790 | None:intergenic |
| TTCGAACCCATCGGAATTGT+GGG | 0.454639 | 1.3:+6623826 | None:intergenic |
| GTTCGAACCCATCGGAATTG+TGG | 0.455887 | 1.3:+6623825 | None:intergenic |
| TAGAAAGTGGATAGATTGCT+TGG | 0.458245 | 1.3:-6621488 | MS.gene051560:CDS |
| TTAAGCTTGTTCCGAGGTCG+TGG | 0.462870 | 1.3:-6624451 | MS.gene051560:CDS |
| AACAGTGGGTACACTAGAAT+GGG | 0.464745 | 1.3:+6621254 | None:intergenic |
| GGTCGTGGACGGATTATCTT+GGG | 0.467250 | 1.3:-6624436 | MS.gene051560:CDS |
| CAACAGTGGGTACACTAGAA+TGG | 0.469023 | 1.3:+6621253 | None:intergenic |
| GGGCGAAATGGAAAGAAGAT+TGG | 0.474103 | 1.3:+6624786 | None:intergenic |
| TACTAAAGATGCAGAGTGGC+TGG | 0.476282 | 1.3:-6623929 | MS.gene051560:CDS |
| GGCCAAGCCATGGCGGAGAA+AGG | 0.478685 | 1.3:-6624602 | MS.gene051560:CDS |
| AGCTCTAAGCAATAGAGAAC+CGG | 0.480668 | 1.3:+6623763 | None:intergenic |
| ATCCTCAAACATGGGGTTGG+TGG | 0.488134 | 1.3:-6621278 | MS.gene051560:CDS |
| GACCACCAACCCCATGTTTG+AGG | 0.489413 | 1.3:+6621276 | None:intergenic |
| GGAGGGTTGAGATTTGTTGA+GGG | 0.491332 | 1.3:-6621467 | MS.gene051560:CDS |
| GATTATCTTGGGTTGACGGT+GGG | 0.491823 | 1.3:-6624425 | MS.gene051560:CDS |
| TGTTGAGGGAATAAAATTTG+AGG | 0.496430 | 1.3:-6621453 | MS.gene051560:CDS |
| GATGAAACGTCGTCGTTTGG+TGG | 0.497366 | 1.3:+6624812 | None:intergenic |
| TCCATCGCTAGTAAAGACTT+TGG | 0.502870 | 1.3:-6624758 | MS.gene051560:CDS |
| TCGATCTTCTGAAGTTAATA+CGG | 0.504348 | 1.3:-6623716 | MS.gene051560:intron |
| CCACATCGGCGGTGGTGTAA+GGG | 0.506838 | 1.3:+6624699 | None:intergenic |
| GCCAAAGTCTTTACTAGCGA+TGG | 0.507471 | 1.3:+6624757 | None:intergenic |
| TATCTTGGGTTGACGGTGGG+TGG | 0.508422 | 1.3:-6624422 | MS.gene051560:CDS |
| ACAGTGGCGGCGCGTGGTAA+CGG | 0.517231 | 1.3:-6624638 | MS.gene051560:CDS |
| TTGCCGTTTGAGGACCATAA+CGG | 0.518469 | 1.3:+6624363 | None:intergenic |
| GCTTGTTCCGAGGTCGTGGA+CGG | 0.521292 | 1.3:-6624447 | MS.gene051560:CDS |
| GGTGGTGTAAGGGCGGAGTA+CGG | 0.523423 | 1.3:+6624709 | None:intergenic |
| TCAAGAAAATCCTCAAACAT+GGG | 0.525014 | 1.3:-6621286 | MS.gene051560:CDS |
| TGCTAAAGCCAAAGGCATAT+GGG | 0.525753 | 1.3:-6621378 | MS.gene051560:CDS |
| GTGATTAATTATAGGTGAGG+TGG | 0.525879 | 1.3:-6623984 | MS.gene051560:intron |
| GACAAGTCCTTTCTCCGCCA+TGG | 0.527704 | 1.3:+6624595 | None:intergenic |
| AACAATGACGACCCTTGTAA+TGG | 0.528629 | 1.3:-6623853 | MS.gene051560:CDS |
| TTTCCGTTATGGTCCTCAAA+CGG | 0.538238 | 1.3:-6624366 | MS.gene051560:CDS |
| TCCTCAAACGGCAAACGTAA+CGG | 0.539282 | 1.3:-6624354 | MS.gene051560:CDS |
| GTAAGGGCGGAGTACGGCGA+GGG | 0.539751 | 1.3:+6624715 | None:intergenic |
| ATTGTGGGCCAACCATTACA+AGG | 0.542464 | 1.3:+6623841 | None:intergenic |
| GACGGATTATCTTGGGTTGA+CGG | 0.542938 | 1.3:-6624429 | MS.gene051560:CDS |
| CGCCACTGTTAAATTTGTGG+TGG | 0.542938 | 1.3:+6624652 | None:intergenic |
| ACGTGTAAAGCGTGTGGAAG+AGG | 0.543242 | 1.3:-6621402 | MS.gene051560:CDS |
| CTCCATCAACGGCCAAGCCA+TGG | 0.544156 | 1.3:-6624612 | MS.gene051560:CDS |
| ATTATAGGTGAGGTGGATGA+GGG | 0.546580 | 1.3:-6623977 | MS.gene051560:intron |
| TGGTTGGCCCACAATTCCGA+TGG | 0.547575 | 1.3:-6623833 | MS.gene051560:CDS |
| CGACATGCGAGCCACGGCGG+AGG | 0.549400 | 1.3:-6624570 | MS.gene051560:CDS |
| AGATAATCCGTCCACGACCT+CGG | 0.550163 | 1.3:+6624440 | None:intergenic |
| GAGTACGGCGAGGGGAGTGG+AGG | 0.555436 | 1.3:+6624724 | None:intergenic |
| TGGAGGGTTGAGATTTGTTG+AGG | 0.555521 | 1.3:-6621468 | MS.gene051560:CDS |
| CACACGTCGACGTTTCCGGT+GGG | 0.555761 | 1.3:-6624514 | MS.gene051560:CDS |
| GGATTATCTTGGGTTGACGG+TGG | 0.555995 | 1.3:-6624426 | MS.gene051560:CDS |
| AAAATTTGGTTCGAACCCAT+CGG | 0.558165 | 1.3:+6623817 | None:intergenic |
| CCGCCGTGGCTCGCATGTCG+AGG | 0.560775 | 1.3:+6624573 | None:intergenic |
| CCCTTACACCACCGCCGATG+TGG | 0.562433 | 1.3:-6624699 | MS.gene051560:CDS |
| CTGAAGAAGGAAGACAAACC+GGG | 0.562836 | 1.3:+6623791 | None:intergenic |
| AAAGTGGATAGATTGCTTGG+AGG | 0.565909 | 1.3:-6621485 | MS.gene051560:CDS |
| ATGACGACCCTTGTAATGGT+TGG | 0.566251 | 1.3:-6623849 | MS.gene051560:CDS |
| TCGACGTAGAGAAGTTGAAA+AGG | 0.566784 | 1.3:+6624545 | None:intergenic |
| ATCGCTAGTAAAGACTTTGG+CGG | 0.568106 | 1.3:-6624755 | MS.gene051560:CDS |
| TTTCAACTTCTCTACGTCGA+CGG | 0.568492 | 1.3:-6624542 | MS.gene051560:CDS |
| CCACACGTCGACGTTTCCGG+TGG | 0.571833 | 1.3:-6624515 | MS.gene051560:CDS |
| AGAACCGGACCAGCTGAAGA+AGG | 0.572550 | 1.3:+6623778 | None:intergenic |
| CACCACAAATTTAACAGTGG+CGG | 0.573395 | 1.3:-6624651 | MS.gene051560:CDS |
| AAAATCCTCAAACATGGGGT+TGG | 0.574467 | 1.3:-6621281 | MS.gene051560:CDS |
| TTCAAGAAAATCCTCAAACA+TGG | 0.574533 | 1.3:-6621287 | MS.gene051560:CDS |
| AATTTAACAGTGGCGGCGCG+TGG | 0.576208 | 1.3:-6624644 | MS.gene051560:CDS |
| ACGATCAAAATCAGCAATGT+CGG | 0.577104 | 1.3:+6621316 | None:intergenic |
| GACACAAACATGTTCAACCA+TGG | 0.577551 | 1.3:+6621344 | None:intergenic |
| TTCTTCCCATAATGCCCCAC+CGG | 0.584444 | 1.3:+6624499 | None:intergenic |
| GTGGATGAGGGTGATTTACT+CGG | 0.585431 | 1.3:-6623965 | MS.gene051560:CDS |
| TTATCTAACGCCGGTGTCAG+TGG | 0.591550 | 1.3:-6624395 | MS.gene051560:CDS |
| CTTACTTGCTTCGCAACAGT+GGG | 0.592991 | 1.3:+6621240 | None:intergenic |
| CCACCGGAAACGTCGACGTG+TGG | 0.593175 | 1.3:+6624515 | None:intergenic |
| AACATGTTCAACCATGGGTG+AGG | 0.595226 | 1.3:+6621350 | None:intergenic |
| TGAGGATGATGTGAAGTACA+TGG | 0.595819 | 1.3:-6621435 | MS.gene051560:CDS |
| ACACGTCGACGTTTCCGGTG+GGG | 0.596713 | 1.3:-6624513 | MS.gene051560:CDS |
| TATGGGATGCACCTCACCCA+TGG | 0.601998 | 1.3:-6621361 | MS.gene051560:CDS |
| TAAGGGCGGAGTACGGCGAG+GGG | 0.607594 | 1.3:+6624716 | None:intergenic |
| ACACAAACATGTTCAACCAT+GGG | 0.614296 | 1.3:+6621345 | None:intergenic |
| GAAAGTCTGACCACTGACAC+CGG | 0.615663 | 1.3:+6624385 | None:intergenic |
| ACTTACTTGCTTCGCAACAG+TGG | 0.615748 | 1.3:+6621239 | None:intergenic |
| TGTCCTCGACATGCGAGCCA+CGG | 0.617094 | 1.3:-6624576 | MS.gene051560:CDS |
| GGTAACGGTCACTCCATCAA+CGG | 0.617798 | 1.3:-6624623 | MS.gene051560:CDS |
| TGTAAGGGCGGAGTACGGCG+AGG | 0.621289 | 1.3:+6624714 | None:intergenic |
| GGTTGGCCCACAATTCCGAT+GGG | 0.621310 | 1.3:-6623832 | MS.gene051560:CDS |
| GAAGAGGATGCTAAAGCCAA+AGG | 0.626533 | 1.3:-6621386 | MS.gene051560:CDS |
| TTTGCTACGTGTAAAGCGTG+TGG | 0.637512 | 1.3:-6621408 | MS.gene051560:CDS |
| CAAGAAAATCCTCAAACATG+GGG | 0.637785 | 1.3:-6621285 | MS.gene051560:CDS |
| TTGAAAAGGCTCCTCCGCCG+TGG | 0.646401 | 1.3:+6624559 | None:intergenic |
| CATCGGCGGTGGTGTAAGGG+CGG | 0.651775 | 1.3:+6624702 | None:intergenic |
| TTTACTAGCGATGGAATTAG+GGG | 0.652593 | 1.3:+6624766 | None:intergenic |
| GGTGGAACTTTATCTAACGC+CGG | 0.664301 | 1.3:-6624404 | MS.gene051560:CDS |
| CATCAACGGCCAAGCCATGG+CGG | 0.679836 | 1.3:-6624609 | MS.gene051560:CDS |
| CCTCGACATGCGAGCCACGG+CGG | 0.681570 | 1.3:-6624573 | MS.gene051560:CDS |
| TTACGTGGAAGGGTTCGTTG+TGG | 0.686031 | 1.3:-6623878 | MS.gene051560:CDS |
| TGGCTGGTGACACTACCAGA+AGG | 0.701936 | 1.3:-6623913 | MS.gene051560:CDS |
| ATTAACTTCAGAAGATCGAG+CGG | 0.709501 | 1.3:+6623720 | None:intergenic |
| GTGACACTACCAGAAGGTGA+CGG | 0.718693 | 1.3:-6623907 | MS.gene051560:CDS |
| TTGTGGGCCAACCATTACAA+GGG | 0.722239 | 1.3:+6623842 | None:intergenic |
| AACCACCACAAATTTAACAG+TGG | 0.724117 | 1.3:-6624654 | MS.gene051560:CDS |
| ACTATACTAAAGATGCAGAG+TGG | 0.735948 | 1.3:-6623933 | MS.gene051560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATTAAAAAAACAAA+TGG | + | chr1.3:6622328-6622347 | None:intergenic | 10.0% |
| !! | AAAAGATTAAAAAAACAAAT+GGG | + | chr1.3:6622327-6622346 | None:intergenic | 10.0% |
| !! | AAAATTAATAAATAAGGATT+AGG | - | chr1.3:6622555-6622574 | MS.gene051560:intron | 10.0% |
| !! | AAATTAATAAATAAGGATTA+GGG | - | chr1.3:6622556-6622575 | MS.gene051560:intron | 10.0% |
| !! | AATAAAATGCAATATATAAT+TGG | - | chr1.3:6622412-6622431 | MS.gene051560:intron | 10.0% |
| !! | TCTAAAAAAAAAAAAAATCA+TGG | + | chr1.3:6623162-6623181 | None:intergenic | 10.0% |
| !! | TTAACAAAATTAATAAACAA+AGG | - | chr1.3:6622841-6622860 | MS.gene051560:intron | 10.0% |
| !!! | TTTTTAATACTTGAAAATTT+AGG | - | chr1.3:6624839-6624858 | MS.gene051560:CDS | 10.0% |
| !! | AATATTTGCTTCAAAAAAAA+AGG | - | chr1.3:6622584-6622603 | MS.gene051560:intron | 15.0% |
| !! | CTTGACAAAATTAATAAATA+AGG | - | chr1.3:6622549-6622568 | MS.gene051560:intron | 15.0% |
| !! | TAAACAAAATGATTTATGTT+TGG | + | chr1.3:6623692-6623711 | None:intergenic | 15.0% |
| !! | TATTAAAAATTATGAGACAA+TGG | + | chr1.3:6624828-6624847 | None:intergenic | 15.0% |
| !! | TGCTTCAAAAAAAATAAAAA+AGG | - | chr1.3:6622699-6622718 | MS.gene051560:intron | 15.0% |
| !!! | TTTTTTAGATGAAATTTGTT+AGG | - | chr1.3:6622755-6622774 | MS.gene051560:intron | 15.0% |
| !! | AAAAAAATAAAAAAGGCAAG+AGG | - | chr1.3:6622706-6622725 | MS.gene051560:intron | 20.0% |
| !! | AAAAATGAAACCATTATTAG+TGG | - | chr1.3:6623849-6623868 | MS.gene051560:CDS | 20.0% |
| !! | AAAGAATGAGAATTGATAAA+GGG | + | chr1.3:6623601-6623620 | None:intergenic | 20.0% |
| !! | ATAATTTGAATTACCATATC+AGG | + | chr1.3:6621790-6621809 | None:intergenic | 20.0% |
| !! | ATGCAATATATAATTGGTAA+CGG | - | chr1.3:6622418-6622437 | MS.gene051560:intron | 20.0% |
| !! | ATTGAATTTGAATTCCTTTA+TGG | - | chr1.3:6624252-6624271 | MS.gene051560:CDS | 20.0% |
| !! | TAAAGAATGAGAATTGATAA+AGG | + | chr1.3:6623602-6623621 | None:intergenic | 20.0% |
| !! | TATCACTATATTACATAGAA+AGG | - | chr1.3:6624790-6624809 | MS.gene051560:CDS | 20.0% |
| !!! | GTATATTTGACTTTTTACTT+GGG | + | chr1.3:6623898-6623917 | None:intergenic | 20.0% |
| !!! | TGGATTTTGATTTTGATTTT+GGG | - | chr1.3:6621974-6621993 | MS.gene051560:intron | 20.0% |
| !!! | TTGGATTTTGATTTTGATTT+TGG | - | chr1.3:6621973-6621992 | MS.gene051560:intron | 20.0% |
| !!! | TTTGAATTTTTTTTTGCCAA+TGG | - | chr1.3:6624071-6624090 | MS.gene051560:intron | 20.0% |
| ! | ACTAAAATAGACATAGCTAA+AGG | + | chr1.3:6623633-6623652 | None:intergenic | 25.0% |
| ! | ACTAATCAAACATAATATGC+CGG | + | chr1.3:6622998-6623017 | None:intergenic | 25.0% |
| ! | AGTGGTAGAAAAACAAATAT+AGG | - | chr1.3:6623867-6623886 | MS.gene051560:CDS | 25.0% |
| ! | CAAGTAAGTTTAAATGAGTT+GGG | - | chr1.3:6621893-6621912 | MS.gene051560:intron | 25.0% |
| ! | CACTTTCTACAATATATCAA+AGG | + | chr1.3:6624482-6624501 | None:intergenic | 25.0% |
| ! | CTTTATGGTTAAGGTTAAAA+TGG | - | chr1.3:6624267-6624286 | MS.gene051560:CDS | 25.0% |
| ! | CTTTGATATATTGTAGAAAG+TGG | - | chr1.3:6624480-6624499 | MS.gene051560:CDS | 25.0% |
| ! | GTAGAAAAACAAATATAGGT+GGG | - | chr1.3:6623871-6623890 | MS.gene051560:CDS | 25.0% |
| ! | TACGGATATTAGTAATAGTT+TGG | + | chr1.3:6623029-6623048 | None:intergenic | 25.0% |
| ! | TTAATAAATAAGGATTAGGG+TGG | - | chr1.3:6622559-6622578 | MS.gene051560:intron | 25.0% |
| ! | TTTGAATTCCTTTATGGTTA+AGG | - | chr1.3:6624258-6624277 | MS.gene051560:CDS | 25.0% |
| !! | AAAAATTGGCTTACCAATTA+AGG | - | chr1.3:6623331-6623350 | MS.gene051560:intron | 25.0% |
| !! | AAAATTGGCTTACCAATTAA+GGG | - | chr1.3:6623332-6623351 | MS.gene051560:intron | 25.0% |
| !! | AAACCTAATTTGCAAATGAA+CGG | - | chr1.3:6622790-6622809 | MS.gene051560:intron | 25.0% |
| !! | CTATTTTATGCTAATAGCTA+AGG | + | chr1.3:6624228-6624247 | None:intergenic | 25.0% |
| !! | GTATAGAGTAGTTTATGTTT+TGG | - | chr1.3:6621954-6621973 | MS.gene051560:intron | 25.0% |
| !! | TGAGAGAATTGATTTATGTT+TGG | + | chr1.3:6623736-6623755 | None:intergenic | 25.0% |
| !! | TGTTTTTCTACCACTAATAA+TGG | + | chr1.3:6623862-6623881 | None:intergenic | 25.0% |
| !!! | AATTTTTTTTTGCCAATGGT+TGG | - | chr1.3:6624075-6624094 | MS.gene051560:intron | 25.0% |
| !!! | ATTTTGGGGTGATTAATTAT+AGG | - | chr1.3:6621989-6622008 | MS.gene051560:intron | 25.0% |
| !!! | ATTTTTTTTTGCCAATGGTT+GGG | - | chr1.3:6624076-6624095 | MS.gene051560:intron | 25.0% |
| !!! | CATTTTAACCTTAACCATAA+AGG | + | chr1.3:6624269-6624288 | None:intergenic | 25.0% |
| !!! | CGTATATTTGACTTTTTACT+TGG | + | chr1.3:6623899-6623918 | None:intergenic | 25.0% |
| !!! | GGATTTTGATTTTGATTTTG+GGG | - | chr1.3:6621975-6621994 | MS.gene051560:intron | 25.0% |
| !!! | TTTTTTAGATGGAAGTTGTT+AGG | - | chr1.3:6622640-6622659 | MS.gene051560:intron | 25.0% |
| AAAAAAAAAGGCAAGAGGAT+AGG | - | chr1.3:6622596-6622615 | MS.gene051560:intron | 30.0% | |
| ACAAAGATTTGACATATGTC+CGG | + | chr1.3:6621927-6621946 | None:intergenic | 30.0% | |
| AGATAACGTCACATATCATT+TGG | - | chr1.3:6623998-6624017 | MS.gene051560:intron | 30.0% | |
| ATATTCAAAGCTGAACCAAA+CGG | - | chr1.3:6623810-6623829 | MS.gene051560:CDS | 30.0% | |
| ATCTCAATAATCAGAGCAAA+TGG | + | chr1.3:6624315-6624334 | None:intergenic | 30.0% | |
| CAAATGAACGGGAAAATATT+AGG | - | chr1.3:6622802-6622821 | MS.gene051560:intron | 30.0% | |
| CAAGAGGATAGGAATAAAAT+TGG | - | chr1.3:6622607-6622626 | MS.gene051560:intron | 30.0% | |
| CTAGTATATGGGAATTGTAA+AGG | - | chr1.3:6622901-6622920 | MS.gene051560:intron | 30.0% | |
| GATAACGTCACATATCATTT+GGG | - | chr1.3:6623999-6624018 | MS.gene051560:intron | 30.0% | |
| GCAAGTAAGTTTAAATGAGT+TGG | - | chr1.3:6621892-6621911 | MS.gene051560:intron | 30.0% | |
| GGTAGAAAAACAAATATAGG+TGG | - | chr1.3:6623870-6623889 | MS.gene051560:CDS | 30.0% | |
| TAATGTGTCAGAAAATCCAA+TGG | + | chr1.3:6624134-6624153 | None:intergenic | 30.0% | |
| TACTAAAATGCTTGTGTTGT+TGG | - | chr1.3:6624159-6624178 | MS.gene051560:intron | 30.0% | |
| TATCATTTGGGTATAAGTGT+TGG | - | chr1.3:6624011-6624030 | MS.gene051560:intron | 30.0% | |
| TCAAGAAAATCCTCAAACAT+GGG | - | chr1.3:6624695-6624714 | MS.gene051560:CDS | 30.0% | |
| TGTTGAGGGAATAAAATTTG+AGG | - | chr1.3:6624528-6624547 | MS.gene051560:CDS | 30.0% | |
| TTCAAGAAAATCCTCAAACA+TGG | - | chr1.3:6624694-6624713 | MS.gene051560:CDS | 30.0% | |
| TTCTTTACAATAAACCCGAA+CGG | + | chr1.3:6622378-6622397 | None:intergenic | 30.0% | |
| ! | AACCTAATTTGCAAATGAAC+GGG | - | chr1.3:6622791-6622810 | MS.gene051560:intron | 30.0% |
| ! | TAATATTGATTGACCTAGCT+TGG | - | chr1.3:6623136-6623155 | MS.gene051560:intron | 30.0% |
| ! | TTTTGCCTTGTCTAGTATAT+GGG | - | chr1.3:6622890-6622909 | MS.gene051560:intron | 30.0% |
| !! | TCGATCTTCTGAAGTTAATA+CGG | - | chr1.3:6622265-6622284 | MS.gene051560:intron | 30.0% |
| !!! | GTGTCATGCATTTTTTTAGA+TGG | - | chr1.3:6622629-6622648 | MS.gene051560:intron | 30.0% |
| !!! | TCCAGAAAATGATGGTTTTT+TGG | + | chr1.3:6624375-6624394 | None:intergenic | 30.0% |
| !!! | TTTTTGGCTAGAATTGCTTT+TGG | + | chr1.3:6623415-6623434 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTGCCAATGGTTG+GGG | - | chr1.3:6624077-6624096 | MS.gene051560:intron | 30.0% |
| AAAAAAATCATGGCCAAGCT+AGG | + | chr1.3:6623152-6623171 | None:intergenic | 35.0% | |
| AAACCAAACAGACCCTTAAT+TGG | + | chr1.3:6623347-6623366 | None:intergenic | 35.0% | |
| AAACCTATACACGTTGTTCA+AGG | + | chr1.3:6623539-6623558 | None:intergenic | 35.0% | |
| AACCACCACAAATTTAACAG+TGG | - | chr1.3:6621327-6621346 | MS.gene051560:CDS | 35.0% | |
| AAGGCAAAAGAACACGAAAA+TGG | + | chr1.3:6622879-6622898 | None:intergenic | 35.0% | |
| AATTAAGGGTCTGTTTGGTT+TGG | - | chr1.3:6623346-6623365 | MS.gene051560:intron | 35.0% | |
| ACACAAACATGTTCAACCAT+GGG | + | chr1.3:6624639-6624658 | None:intergenic | 35.0% | |
| ACATGTACGAAGTTGAGATA+TGG | - | chr1.3:6623933-6623952 | MS.gene051560:CDS | 35.0% | |
| ACATTTGATATGCTCAGATG+CGG | - | chr1.3:6621846-6621865 | MS.gene051560:intron | 35.0% | |
| ACGACACTAACTTAGACATA+CGG | + | chr1.3:6623047-6623066 | None:intergenic | 35.0% | |
| ACGATCAAAATCAGCAATGT+CGG | + | chr1.3:6624668-6624687 | None:intergenic | 35.0% | |
| ACTATACTAAAGATGCAGAG+TGG | - | chr1.3:6622048-6622067 | MS.gene051560:intron | 35.0% | |
| ATTAACTTCAGAAGATCGAG+CGG | + | chr1.3:6622264-6622283 | None:intergenic | 35.0% | |
| CAAGAAAATCCTCAAACATG+GGG | - | chr1.3:6624696-6624715 | MS.gene051560:CDS | 35.0% | |
| CAATTCCCATATACTAGACA+AGG | + | chr1.3:6622898-6622917 | None:intergenic | 35.0% | |
| CTACAGATTCCAGAAAATGA+TGG | + | chr1.3:6624383-6624402 | None:intergenic | 35.0% | |
| CTTTACTAGCGATGGAATTA+GGG | + | chr1.3:6621219-6621238 | None:intergenic | 35.0% | |
| GCTTCAAAAAAAAAGGCAAG+AGG | - | chr1.3:6622591-6622610 | MS.gene051560:intron | 35.0% | |
| GTGATTAATTATAGGTGAGG+TGG | - | chr1.3:6621997-6622016 | MS.gene051560:intron | 35.0% | |
| TAGAAAGTGGATAGATTGCT+TGG | - | chr1.3:6624493-6624512 | MS.gene051560:CDS | 35.0% | |
| TATTCAAAGCTGAACCAAAC+GGG | - | chr1.3:6623811-6623830 | MS.gene051560:CDS | 35.0% | |
| TCAGGCATAGAAAACATGTT+TGG | - | chr1.3:6622934-6622953 | MS.gene051560:intron | 35.0% | |
| TCTTTACTAGCGATGGAATT+AGG | + | chr1.3:6621220-6621239 | None:intergenic | 35.0% | |
| TTACCAATTAAGGGTCTGTT+TGG | - | chr1.3:6623341-6623360 | MS.gene051560:intron | 35.0% | |
| TTCCCGTTCATTTGCAAATT+AGG | + | chr1.3:6622796-6622815 | None:intergenic | 35.0% | |
| TTGGAAGTTGTTACTGGTAA+AGG | - | chr1.3:6621652-6621671 | MS.gene051560:intron | 35.0% | |
| TTTACTAGCGATGGAATTAG+GGG | + | chr1.3:6621218-6621237 | None:intergenic | 35.0% | |
| ! | AAAATTTGGTTCGAACCCAT+CGG | + | chr1.3:6622167-6622186 | None:intergenic | 35.0% |
| ! | CTTTTGCCTTGTCTAGTATA+TGG | - | chr1.3:6622889-6622908 | MS.gene051560:intron | 35.0% |
| ! | GCAAAGTACAGTGTCTTATT+CGG | + | chr1.3:6624195-6624214 | None:intergenic | 35.0% |
| ! | GCCAAAAAACCATCATTTTC+TGG | - | chr1.3:6624371-6624390 | MS.gene051560:CDS | 35.0% |
| ! | TCCGAAATTTTACATGACAC+CGG | - | chr1.3:6622976-6622995 | MS.gene051560:intron | 35.0% |
| ! | TTCGAACCAAATTTTCAACC+CGG | - | chr1.3:6622172-6622191 | MS.gene051560:intron | 35.0% |
| ! | TTCTAGAAAAGCTAGAAGCT+AGG | + | chr1.3:6623508-6623527 | None:intergenic | 35.0% |
| ! | TTTTACGGCTTTTACCACAT+CGG | + | chr1.3:6621299-6621318 | None:intergenic | 35.0% |
| !! | GCACTGTAGAGAATTGATTT+TGG | + | chr1.3:6623393-6623412 | None:intergenic | 35.0% |
| !! | TGAACCAAACACGTTGTTTT+TGG | + | chr1.3:6623431-6623450 | None:intergenic | 35.0% |
| !!! | GATGGTTTTTTGGCCATTTA+CGG | + | chr1.3:6624365-6624384 | None:intergenic | 35.0% |
| !!! | TTGGGTATAAGTGTTGGTTT+TGG | - | chr1.3:6624017-6624036 | MS.gene051560:intron | 35.0% |
| !!! | TTTTTTTTGCCAATGGTTGG+GGG | - | chr1.3:6624078-6624097 | MS.gene051560:intron | 35.0% |
| AAAATCAGCAATGTCGGTCT+TGG | + | chr1.3:6624662-6624681 | None:intergenic | 40.0% | |
| AAAATCCTCAAACATGGGGT+TGG | - | chr1.3:6624700-6624719 | MS.gene051560:CDS | 40.0% | |
| AAAGTGGATAGATTGCTTGG+AGG | - | chr1.3:6624496-6624515 | MS.gene051560:CDS | 40.0% | |
| AACAATGACGACCCTTGTAA+TGG | - | chr1.3:6622128-6622147 | MS.gene051560:intron | 40.0% | |
| AACAGTGGGTACACTAGAAT+GGG | + | chr1.3:6624730-6624749 | None:intergenic | 40.0% | |
| AAGTGGATAGATTGCTTGGA+GGG | - | chr1.3:6624497-6624516 | MS.gene051560:CDS | 40.0% | |
| AATTATAGGTGAGGTGGATG+AGG | - | chr1.3:6622003-6622022 | MS.gene051560:intron | 40.0% | |
| ACGAAGTTGAGATATGGAAG+AGG | - | chr1.3:6623939-6623958 | MS.gene051560:CDS | 40.0% | |
| ACGGAATTGGAAGTTGTTAC+TGG | - | chr1.3:6621646-6621665 | MS.gene051560:intron | 40.0% | |
| AGCTAGGATTTGTAGCTTCA+TGG | + | chr1.3:6623492-6623511 | None:intergenic | 40.0% | |
| ATCGCTAGTAAAGACTTTGG+CGG | - | chr1.3:6621226-6621245 | MS.gene051560:intron | 40.0% | |
| ATTATAGGTGAGGTGGATGA+GGG | - | chr1.3:6622004-6622023 | MS.gene051560:intron | 40.0% | |
| CACCACAAATTTAACAGTGG+CGG | - | chr1.3:6621330-6621349 | MS.gene051560:CDS | 40.0% | |
| CTAGCCAAAAACAACGTGTT+TGG | - | chr1.3:6623424-6623443 | MS.gene051560:intron | 40.0% | |
| GACACAAACATGTTCAACCA+TGG | + | chr1.3:6624640-6624659 | None:intergenic | 40.0% | |
| GGGGTGATTAATTATAGGTG+AGG | - | chr1.3:6621994-6622013 | MS.gene051560:intron | 40.0% | |
| GGTCGTAATGTATCTTCCAT+TGG | - | chr1.3:6624115-6624134 | MS.gene051560:intron | 40.0% | |
| GGTGATTTACTCGGAATTTG+AGG | - | chr1.3:6622025-6622044 | MS.gene051560:intron | 40.0% | |
| TAATCAAAACCGTCACCTTC+TGG | + | chr1.3:6622086-6622105 | None:intergenic | 40.0% | |
| TACCTTGAACACTTCGTTCA+TGG | - | chr1.3:6621130-6621149 | MS.gene051560:intron | 40.0% | |
| TCCATCGCTAGTAAAGACTT+TGG | - | chr1.3:6621223-6621242 | MS.gene051560:intron | 40.0% | |
| TCGACGTAGAGAAGTTGAAA+AGG | + | chr1.3:6621439-6621458 | None:intergenic | 40.0% | |
| TCTCAACTTCGTACATGTGT+AGG | + | chr1.3:6623931-6623950 | None:intergenic | 40.0% | |
| TCTCCTTGAACAACGTGTAT+AGG | - | chr1.3:6623533-6623552 | MS.gene051560:intron | 40.0% | |
| TCTTCAACAAGCTCCTGATA+TGG | - | chr1.3:6621774-6621793 | MS.gene051560:intron | 40.0% | |
| TGAGGATGATGTGAAGTACA+TGG | - | chr1.3:6624546-6624565 | MS.gene051560:CDS | 40.0% | |
| TTTCAACTTCTCTACGTCGA+CGG | - | chr1.3:6621439-6621458 | MS.gene051560:CDS | 40.0% | |
| TTTCCGTTATGGTCCTCAAA+CGG | - | chr1.3:6621615-6621634 | MS.gene051560:intron | 40.0% | |
| ! | ATGCTAAAGCCAAAGGCATA+TGG | - | chr1.3:6624602-6624621 | MS.gene051560:CDS | 40.0% |
| ! | GACAAACCGGGTTGAAAATT+TGG | + | chr1.3:6622181-6622200 | None:intergenic | 40.0% |
| ! | GCTTCATGGAGAATTGCTTT+TGG | + | chr1.3:6623478-6623497 | None:intergenic | 40.0% |
| ! | TGCTAAAGCCAAAGGCATAT+GGG | - | chr1.3:6624603-6624622 | MS.gene051560:CDS | 40.0% |
| ! | TTCCATGAACGAAGTGTTCA+AGG | + | chr1.3:6621135-6621154 | None:intergenic | 40.0% |
| ! | TTGAGATCTTGCTGACGTTT+TGG | - | chr1.3:6624328-6624347 | MS.gene051560:CDS | 40.0% |
| !! | AGCTCTAAGCAATAGAGAAC+CGG | + | chr1.3:6622221-6622240 | None:intergenic | 40.0% |
| !! | AGCTTGTTGAAGAACGATTC+TGG | + | chr1.3:6621767-6621786 | None:intergenic | 40.0% |
| !! | CGAATTTTAAGCTTGTTCCG+AGG | - | chr1.3:6621524-6621543 | MS.gene051560:intron | 40.0% |
| !! | GCCGGTGTCATGTAAAATTT+CGG | + | chr1.3:6622980-6622999 | None:intergenic | 40.0% |
| !! | TCATGGAGAATTGCTTTTGG+AGG | + | chr1.3:6623475-6623494 | None:intergenic | 40.0% |
| !! | TTTTTGATTCGTGCTCCGTT+CGG | - | chr1.3:6622360-6622379 | MS.gene051560:intron | 40.0% |
| !!! | ACGGTTTTGATTACGTGGAA+GGG | - | chr1.3:6622093-6622112 | MS.gene051560:intron | 40.0% |
| !!! | CTCTTTTTTGCTTCACTTGG+TGG | - | chr1.3:6621712-6621731 | MS.gene051560:intron | 40.0% |
| !!! | GAGCTCTTTTTTGCTTCACT+TGG | - | chr1.3:6621709-6621728 | MS.gene051560:intron | 40.0% |
| AACATGTTCAACCATGGGTG+AGG | + | chr1.3:6624634-6624653 | None:intergenic | 45.0% | |
| ACTTACTTGCTTCGCAACAG+TGG | + | chr1.3:6624745-6624764 | None:intergenic | 45.0% | |
| ACTTCAACTTAGTGCCCGTT+TGG | + | chr1.3:6623828-6623847 | None:intergenic | 45.0% | |
| AGAGATGAAACGTCGTCGTT+TGG | + | chr1.3:6621175-6621194 | None:intergenic | 45.0% | |
| AGTGGTCAGACTTTCCGTTA+TGG | - | chr1.3:6621604-6621623 | MS.gene051560:intron | 45.0% | |
| AGTTGTACTTAGCAGCTTCC+AGG | + | chr1.3:6623115-6623134 | None:intergenic | 45.0% | |
| ATGACGACCCTTGTAATGGT+TGG | - | chr1.3:6622132-6622151 | MS.gene051560:intron | 45.0% | |
| ATTGTGGGCCAACCATTACA+AGG | + | chr1.3:6622143-6622162 | None:intergenic | 45.0% | |
| CAACAGTGGGTACACTAGAA+TGG | + | chr1.3:6624731-6624750 | None:intergenic | 45.0% | |
| CAATGACGCAATATTGACCC+TGG | - | chr1.3:6623094-6623113 | MS.gene051560:intron | 45.0% | |
| CGCCACTGTTAAATTTGTGG+TGG | + | chr1.3:6621332-6621351 | None:intergenic | 45.0% | |
| CTGAAGAAGGAAGACAAACC+GGG | + | chr1.3:6622193-6622212 | None:intergenic | 45.0% | |
| CTTACTTGCTTCGCAACAGT+GGG | + | chr1.3:6624744-6624763 | None:intergenic | 45.0% | |
| GAAGAGGATGCTAAAGCCAA+AGG | - | chr1.3:6624595-6624614 | MS.gene051560:CDS | 45.0% | |
| GCCAAAGTCTTTACTAGCGA+TGG | + | chr1.3:6621227-6621246 | None:intergenic | 45.0% | |
| GCTGAAGAAGGAAGACAAAC+CGG | + | chr1.3:6622194-6622213 | None:intergenic | 45.0% | |
| GGGCGAAATGGAAAGAAGAT+TGG | + | chr1.3:6621198-6621217 | None:intergenic | 45.0% | |
| GGTGGAACTTTATCTAACGC+CGG | - | chr1.3:6621577-6621596 | MS.gene051560:intron | 45.0% | |
| GTGGATGAGGGTGATTTACT+CGG | - | chr1.3:6622016-6622035 | MS.gene051560:intron | 45.0% | |
| GTTGTACTTAGCAGCTTCCA+GGG | + | chr1.3:6623114-6623133 | None:intergenic | 45.0% | |
| GTTTGTCTTCCTTCTTCAGC+TGG | - | chr1.3:6622194-6622213 | MS.gene051560:intron | 45.0% | |
| TACTAAAGATGCAGAGTGGC+TGG | - | chr1.3:6622052-6622071 | MS.gene051560:intron | 45.0% | |
| TCCTCAAACGGCAAACGTAA+CGG | - | chr1.3:6621627-6621646 | MS.gene051560:intron | 45.0% | |
| TTCGAACCCATCGGAATTGT+GGG | + | chr1.3:6622158-6622177 | None:intergenic | 45.0% | |
| TTGGCCATTTACGGAACTGT+GGG | + | chr1.3:6624356-6624375 | None:intergenic | 45.0% | |
| TTGGGGGAAAACTGACTACA+CGG | - | chr1.3:6624094-6624113 | MS.gene051560:intron | 45.0% | |
| TTGTGGGCCAACCATTACAA+GGG | + | chr1.3:6622142-6622161 | None:intergenic | 45.0% | |
| TTTGCTACGTGTAAAGCGTG+TGG | - | chr1.3:6624573-6624592 | MS.gene051560:CDS | 45.0% | |
| TTTGGCCATTTACGGAACTG+TGG | + | chr1.3:6624357-6624376 | None:intergenic | 45.0% | |
| ! | AACGGCAAACGTAACGGAAT+TGG | - | chr1.3:6621633-6621652 | MS.gene051560:intron | 45.0% |
| ! | AATGAGTTGGGCTAAGAGTC+CGG | - | chr1.3:6621905-6621924 | MS.gene051560:intron | 45.0% |
| ! | TTGCCGTTTGAGGACCATAA+CGG | + | chr1.3:6621621-6621640 | None:intergenic | 45.0% |
| ! | TTTGCTTCACTTGGTGGTCT+TGG | - | chr1.3:6621718-6621737 | MS.gene051560:intron | 45.0% |
| !! | GACGGATTATCTTGGGTTGA+CGG | - | chr1.3:6621552-6621571 | MS.gene051560:intron | 45.0% |
| !! | GATTATCTTGGGTTGACGGT+GGG | - | chr1.3:6621556-6621575 | MS.gene051560:intron | 45.0% |
| !! | GGAGGGTTGAGATTTGTTGA+GGG | - | chr1.3:6624514-6624533 | MS.gene051560:CDS | 45.0% |
| !! | GTTTTCTATGCCTGACTCGT+CGG | + | chr1.3:6622929-6622948 | None:intergenic | 45.0% |
| !! | TGGAGGGTTGAGATTTGTTG+AGG | - | chr1.3:6624513-6624532 | MS.gene051560:CDS | 45.0% |
| !! | TTTTGATTCGTGCTCCGTTC+GGG | - | chr1.3:6622361-6622380 | MS.gene051560:intron | 45.0% |
| !!! | AGGTGACGGTTTTGATTACG+TGG | - | chr1.3:6622088-6622107 | MS.gene051560:intron | 45.0% |
| !!! | GACGGTTTTGATTACGTGGA+AGG | - | chr1.3:6622092-6622111 | MS.gene051560:intron | 45.0% |
| !! | ATATATTATAAAAGAAAATT+AGG | - | chr1.3:6622511-6622530 | MS.gene051560:intron | 5.0% |
| !!! | TTTTTTTTTTTAGAAAAAAT+TGG | - | chr1.3:6623317-6623336 | MS.gene051560:intron | 5.0% |
| ACGTGTAAAGCGTGTGGAAG+AGG | - | chr1.3:6624579-6624598 | MS.gene051560:CDS | 50.0% | |
| AGATAATCCGTCCACGACCT+CGG | + | chr1.3:6621544-6621563 | None:intergenic | 50.0% | |
| AGGTGCATCCCATATGCCTT+TGG | + | chr1.3:6624614-6624633 | None:intergenic | 50.0% | |
| ATCCTCAAACATGGGGTTGG+TGG | - | chr1.3:6624703-6624722 | MS.gene051560:CDS | 50.0% | |
| CGATGGAATTAGGGGCGAAA+TGG | + | chr1.3:6621210-6621229 | None:intergenic | 50.0% | |
| CGCCGCCACTGTTAAATTTG+TGG | + | chr1.3:6621335-6621354 | None:intergenic | 50.0% | |
| GAAAGTCTGACCACTGACAC+CGG | + | chr1.3:6621599-6621618 | None:intergenic | 50.0% | |
| GATGAAACGTCGTCGTTTGG+TGG | + | chr1.3:6621172-6621191 | None:intergenic | 50.0% | |
| GTGACACTACCAGAAGGTGA+CGG | - | chr1.3:6622074-6622093 | MS.gene051560:intron | 50.0% | |
| GTTCGAACCCATCGGAATTG+TGG | + | chr1.3:6622159-6622178 | None:intergenic | 50.0% | |
| TCTTCCTTCTTCAGCTGGTC+CGG | - | chr1.3:6622199-6622218 | MS.gene051560:intron | 50.0% | |
| TGGCCATTTACGGAACTGTG+GGG | + | chr1.3:6624355-6624374 | None:intergenic | 50.0% | |
| TGTAAAGGATCCGACGAGTC+AGG | - | chr1.3:6622916-6622935 | MS.gene051560:intron | 50.0% | |
| TTACGTGGAAGGGTTCGTTG+TGG | - | chr1.3:6622103-6622122 | MS.gene051560:intron | 50.0% | |
| TTCTTCCCATAATGCCCCAC+CGG | + | chr1.3:6621485-6621504 | None:intergenic | 50.0% | |
| ! | CTTGGTGGTCTTGGTCAGTT+TGG | - | chr1.3:6621727-6621746 | MS.gene051560:intron | 50.0% |
| ! | GGTAACGGTCACTCCATCAA+CGG | - | chr1.3:6621358-6621377 | MS.gene051560:CDS | 50.0% |
| ! | GTCAGTTTTCCCCCAACCAT+TGG | + | chr1.3:6624090-6624109 | None:intergenic | 50.0% |
| ! | TACGGCTTTTACCACATCGG+CGG | + | chr1.3:6621296-6621315 | None:intergenic | 50.0% |
| ! | TCCGTTACGTTTGCCGTTTG+AGG | + | chr1.3:6621631-6621650 | None:intergenic | 50.0% |
| ! | TTAAGCTTGTTCCGAGGTCG+TGG | - | chr1.3:6621530-6621549 | MS.gene051560:intron | 50.0% |
| ! | TTATCTAACGCCGGTGTCAG+TGG | - | chr1.3:6621586-6621605 | MS.gene051560:intron | 50.0% |
| !! | AGGTCGTGGACGGATTATCT+TGG | - | chr1.3:6621544-6621563 | MS.gene051560:intron | 50.0% |
| !! | GGATTATCTTGGGTTGACGG+TGG | - | chr1.3:6621555-6621574 | MS.gene051560:intron | 50.0% |
| !! | GGTCGTGGACGGATTATCTT+GGG | - | chr1.3:6621545-6621564 | MS.gene051560:intron | 50.0% |
| !!! | GGTGGTTGCTGCTGCTTTTA+CGG | + | chr1.3:6621314-6621333 | None:intergenic | 50.0% |
| AATTTAACAGTGGCGGCGCG+TGG | - | chr1.3:6621337-6621356 | MS.gene051560:CDS | 55.0% | |
| AGAACCGGACCAGCTGAAGA+AGG | + | chr1.3:6622206-6622225 | None:intergenic | 55.0% | |
| GACAAGTCCTTTCTCCGCCA+TGG | + | chr1.3:6621389-6621408 | None:intergenic | 55.0% | |
| GACCACCAACCCCATGTTTG+AGG | + | chr1.3:6624708-6624727 | None:intergenic | 55.0% | |
| GGTCCCCACAGTTCCGTAAA+TGG | - | chr1.3:6624349-6624368 | MS.gene051560:CDS | 55.0% | |
| GTTCCACACGTCGACGTTTC+CGG | - | chr1.3:6621463-6621482 | MS.gene051560:CDS | 55.0% | |
| TATGGGATGCACCTCACCCA+TGG | - | chr1.3:6624620-6624639 | MS.gene051560:CDS | 55.0% | |
| TGGCTGGTGACACTACCAGA+AGG | - | chr1.3:6622068-6622087 | MS.gene051560:intron | 55.0% | |
| ! | ACGTTTCCGGTGGGGCATTA+TGG | - | chr1.3:6621476-6621495 | MS.gene051560:CDS | 55.0% |
| ! | CGTTTCCGGTGGGGCATTAT+GGG | - | chr1.3:6621477-6621496 | MS.gene051560:CDS | 55.0% |
| ! | GGTTGGCCCACAATTCCGAT+GGG | - | chr1.3:6622149-6622168 | MS.gene051560:intron | 55.0% |
| ! | TGGTTGGCCCACAATTCCGA+TGG | - | chr1.3:6622148-6622167 | MS.gene051560:intron | 55.0% |
| !! | TATCTTGGGTTGACGGTGGG+TGG | - | chr1.3:6621559-6621578 | MS.gene051560:intron | 55.0% |
| ACACGTCGACGTTTCCGGTG+GGG | - | chr1.3:6621468-6621487 | MS.gene051560:CDS | 60.0% | |
| ACCACATCGGCGGTGGTGTA+AGG | + | chr1.3:6621286-6621305 | None:intergenic | 60.0% | |
| CACACGTCGACGTTTCCGGT+GGG | - | chr1.3:6621467-6621486 | MS.gene051560:CDS | 60.0% | |
| CATCAACGGCCAAGCCATGG+CGG | - | chr1.3:6621372-6621391 | MS.gene051560:CDS | 60.0% | |
| CCACATCGGCGGTGGTGTAA+GGG | + | chr1.3:6621285-6621304 | None:intergenic | 60.0% | |
| CTCCATCAACGGCCAAGCCA+TGG | - | chr1.3:6621369-6621388 | MS.gene051560:CDS | 60.0% | |
| GCTTGTTCCGAGGTCGTGGA+CGG | - | chr1.3:6621534-6621553 | MS.gene051560:intron | 60.0% | |
| GGTGGTGTAAGGGCGGAGTA+CGG | + | chr1.3:6621275-6621294 | None:intergenic | 60.0% | |
| GTCCTTTCTCCGCCATGGCT+TGG | + | chr1.3:6621384-6621403 | None:intergenic | 60.0% | |
| TGTCCTCGACATGCGAGCCA+CGG | - | chr1.3:6621405-6621424 | MS.gene051560:CDS | 60.0% | |
| TTGAAAAGGCTCCTCCGCCG+TGG | + | chr1.3:6621425-6621444 | None:intergenic | 60.0% | |
| ! | GGCTTTTACCACATCGGCGG+TGG | + | chr1.3:6621293-6621312 | None:intergenic | 60.0% |
| ACAGTGGCGGCGCGTGGTAA+CGG | - | chr1.3:6621343-6621362 | MS.gene051560:CDS | 65.0% | |
| CATCGGCGGTGGTGTAAGGG+CGG | + | chr1.3:6621282-6621301 | None:intergenic | 65.0% | |
| CCACACGTCGACGTTTCCGG+TGG | - | chr1.3:6621466-6621485 | MS.gene051560:CDS | 65.0% | |
| CCACCGGAAACGTCGACGTG+TGG | + | chr1.3:6621469-6621488 | None:intergenic | 65.0% | |
| CCCTTACACCACCGCCGATG+TGG | - | chr1.3:6621282-6621301 | MS.gene051560:CDS | 65.0% | |
| GTAAGGGCGGAGTACGGCGA+GGG | + | chr1.3:6621269-6621288 | None:intergenic | 65.0% | |
| TAAGGGCGGAGTACGGCGAG+GGG | + | chr1.3:6621268-6621287 | None:intergenic | 65.0% | |
| TGTAAGGGCGGAGTACGGCG+AGG | + | chr1.3:6621270-6621289 | None:intergenic | 65.0% | |
| ! | CGCCATGGCTTGGCCGTTGA+TGG | + | chr1.3:6621374-6621393 | None:intergenic | 65.0% |
| ! | GGCCAAGCCATGGCGGAGAA+AGG | - | chr1.3:6621379-6621398 | MS.gene051560:CDS | 65.0% |
| CCTCGACATGCGAGCCACGG+CGG | - | chr1.3:6621408-6621427 | MS.gene051560:CDS | 70.0% | |
| GAGTACGGCGAGGGGAGTGG+AGG | + | chr1.3:6621260-6621279 | None:intergenic | 70.0% | |
| CCGCCGTGGCTCGCATGTCG+AGG | + | chr1.3:6621411-6621430 | None:intergenic | 75.0% | |
| CGACATGCGAGCCACGGCGG+AGG | - | chr1.3:6621411-6621430 | MS.gene051560:CDS | 75.0% | |
| GCGGAGTACGGCGAGGGGAG+TGG | + | chr1.3:6621263-6621282 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 6621121 | 6624882 | 6621121 | ID=MS.gene051560 |
| chr1.3 | mRNA | 6621121 | 6624882 | 6621121 | ID=MS.gene051560.t1;Parent=MS.gene051560 |
| chr1.3 | exon | 6624208 | 6624882 | 6624208 | ID=MS.gene051560.t1.exon1;Parent=MS.gene051560.t1 |
| chr1.3 | CDS | 6624208 | 6624882 | 6624208 | ID=cds.MS.gene051560.t1;Parent=MS.gene051560.t1 |
| chr1.3 | exon | 6623717 | 6623992 | 6623717 | ID=MS.gene051560.t1.exon2;Parent=MS.gene051560.t1 |
| chr1.3 | CDS | 6623717 | 6623992 | 6623717 | ID=cds.MS.gene051560.t1;Parent=MS.gene051560.t1 |
| chr1.3 | exon | 6621245 | 6621507 | 6621245 | ID=MS.gene051560.t1.exon3;Parent=MS.gene051560.t1 |
| chr1.3 | CDS | 6621245 | 6621507 | 6621245 | ID=cds.MS.gene051560.t1;Parent=MS.gene051560.t1 |
| chr1.3 | exon | 6621121 | 6621142 | 6621121 | ID=MS.gene051560.t1.exon4;Parent=MS.gene051560.t1 |
| chr1.3 | CDS | 6621121 | 6621142 | 6621121 | ID=cds.MS.gene051560.t1;Parent=MS.gene051560.t1 |
| Gene Sequence |
| Protein sequence |
