Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38582.t1 | XP_003602845.1 | 75.6 | 168 | 36 | 1 | 1 | 163 | 17 | 184 | 8.20E-49 | 203.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38582.t1 | Q41001 | 71.1 | 166 | 38 | 2 | 1 | 156 | 18 | 183 | 6.8e-36 | 151.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38582.t1 | G7J401 | 75.6 | 168 | 36 | 1 | 1 | 163 | 17 | 184 | 5.9e-49 | 203.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38582 | MS.gene55509 | PPI |
| MS.gene47150 | MS.gene38582 | PPI |
| MS.gene074086 | MS.gene38582 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38582.t1 | MTR_3g099570 | 82.738 | 168 | 24 | 1 | 1 | 163 | 17 | 184 | 1.78e-86 | 251 |
| MS.gene38582.t1 | MTR_3g099580 | 68.421 | 171 | 45 | 3 | 1 | 163 | 17 | 186 | 8.39e-58 | 179 |
| MS.gene38582.t1 | MTR_3g099680 | 58.049 | 205 | 39 | 5 | 1 | 159 | 17 | 220 | 1.60e-56 | 177 |
| MS.gene38582.t1 | MTR_3g099980 | 58.621 | 203 | 39 | 5 | 1 | 159 | 17 | 218 | 1.77e-56 | 176 |
| MS.gene38582.t1 | MTR_3g099540 | 59.091 | 110 | 40 | 1 | 1 | 105 | 18 | 127 | 3.23e-38 | 127 |
| MS.gene38582.t1 | MTR_8g007035 | 50.467 | 107 | 45 | 3 | 1 | 99 | 14 | 120 | 1.53e-26 | 99.8 |
| MS.gene38582.t1 | MTR_8g007020 | 40.964 | 166 | 89 | 4 | 1 | 157 | 14 | 179 | 2.04e-26 | 99.0 |
| MS.gene38582.t1 | MTR_1g090190 | 33.125 | 160 | 102 | 1 | 7 | 161 | 20 | 179 | 4.86e-26 | 97.8 |
| MS.gene38582.t1 | MTR_4g114870 | 41.379 | 116 | 58 | 2 | 8 | 113 | 27 | 142 | 1.45e-21 | 89.7 |
| MS.gene38582.t1 | MTR_4g114870 | 42.574 | 101 | 48 | 2 | 9 | 99 | 190 | 290 | 3.45e-19 | 83.2 |
| MS.gene38582.t1 | MTR_2g088990 | 39.706 | 136 | 68 | 4 | 6 | 127 | 21 | 156 | 1.00e-20 | 85.1 |
| MS.gene38582.t1 | MTR_5g006040 | 36.667 | 120 | 68 | 2 | 7 | 118 | 23 | 142 | 6.76e-19 | 79.3 |
| MS.gene38582.t1 | MTR_6g083240 | 34.177 | 158 | 89 | 4 | 5 | 150 | 22 | 176 | 2.52e-18 | 77.8 |
| MS.gene38582.t1 | MTR_8g099220 | 39.806 | 103 | 53 | 2 | 7 | 100 | 26 | 128 | 3.31e-18 | 76.3 |
| MS.gene38582.t1 | MTR_6g080660 | 38.000 | 100 | 57 | 1 | 9 | 103 | 27 | 126 | 9.74e-17 | 74.3 |
| MS.gene38582.t1 | MTR_1g090420 | 31.618 | 136 | 80 | 4 | 7 | 133 | 25 | 156 | 9.96e-17 | 74.3 |
| MS.gene38582.t1 | MTR_7g086140 | 40.594 | 101 | 53 | 2 | 6 | 99 | 22 | 122 | 1.77e-16 | 72.4 |
| MS.gene38582.t1 | MTR_7g086190 | 40.594 | 101 | 53 | 2 | 6 | 99 | 22 | 122 | 1.77e-16 | 72.4 |
| MS.gene38582.t1 | MTR_2g043730 | 39.216 | 102 | 53 | 3 | 5 | 100 | 27 | 125 | 2.90e-16 | 71.2 |
| MS.gene38582.t1 | MTR_2g025580 | 33.333 | 117 | 71 | 2 | 1 | 110 | 18 | 134 | 1.15e-15 | 70.9 |
| MS.gene38582.t1 | MTR_7g086160 | 39.000 | 100 | 54 | 2 | 7 | 99 | 24 | 123 | 4.65e-15 | 68.9 |
| MS.gene38582.t1 | MTR_1g105130 | 37.624 | 101 | 56 | 2 | 6 | 99 | 21 | 121 | 4.71e-15 | 68.6 |
| MS.gene38582.t1 | MTR_1g105120 | 37.624 | 101 | 56 | 2 | 6 | 99 | 21 | 121 | 4.71e-15 | 68.6 |
| MS.gene38582.t1 | MTR_6g023760 | 37.255 | 102 | 58 | 2 | 4 | 99 | 20 | 121 | 1.03e-14 | 68.2 |
| MS.gene38582.t1 | MTR_4g007250 | 37.500 | 104 | 58 | 2 | 4 | 101 | 23 | 125 | 1.47e-14 | 67.8 |
| MS.gene38582.t1 | MTR_0334s0010 | 37.864 | 103 | 56 | 2 | 5 | 99 | 23 | 125 | 2.48e-14 | 67.8 |
| MS.gene38582.t1 | MTR_1g104800 | 35.644 | 101 | 57 | 3 | 7 | 99 | 22 | 122 | 6.52e-14 | 66.2 |
| MS.gene38582.t1 | MTR_7g086220 | 36.264 | 91 | 52 | 1 | 6 | 90 | 21 | 111 | 1.08e-13 | 65.1 |
| MS.gene38582.t1 | MTR_8g463180 | 33.333 | 120 | 71 | 3 | 5 | 116 | 19 | 137 | 1.98e-13 | 66.6 |
| MS.gene38582.t1 | MTR_4g067200 | 37.815 | 119 | 62 | 4 | 1 | 107 | 19 | 137 | 1.99e-13 | 64.7 |
| MS.gene38582.t1 | MTR_4g066110 | 37.815 | 119 | 62 | 4 | 1 | 107 | 19 | 137 | 1.99e-13 | 64.7 |
| MS.gene38582.t1 | MTR_2g101300 | 34.677 | 124 | 67 | 4 | 7 | 117 | 24 | 146 | 3.21e-13 | 64.7 |
| MS.gene38582.t1 | MTR_7g086100 | 33.654 | 104 | 63 | 1 | 6 | 103 | 22 | 125 | 8.11e-13 | 64.3 |
| MS.gene38582.t1 | MTR_2g043790 | 38.384 | 99 | 52 | 3 | 5 | 97 | 2 | 97 | 1.02e-12 | 61.2 |
| MS.gene38582.t1 | MTR_7g086090 | 35.652 | 115 | 68 | 1 | 6 | 114 | 22 | 136 | 6.68e-12 | 62.0 |
| MS.gene38582.t1 | MTR_4g077787 | 27.407 | 135 | 85 | 4 | 12 | 134 | 34 | 167 | 3.82e-11 | 58.9 |
| MS.gene38582.t1 | MTR_4g130800 | 38.272 | 81 | 44 | 1 | 25 | 99 | 49 | 129 | 4.22e-11 | 60.1 |
| MS.gene38582.t1 | MTR_7g086280 | 31.731 | 104 | 65 | 1 | 6 | 103 | 22 | 125 | 4.24e-11 | 58.5 |
| MS.gene38582.t1 | MTR_6g022170 | 34.314 | 102 | 58 | 2 | 7 | 99 | 31 | 132 | 4.31e-11 | 58.5 |
| MS.gene38582.t1 | MTR_7g086230 | 31.731 | 104 | 65 | 1 | 6 | 103 | 22 | 125 | 4.60e-11 | 58.5 |
| MS.gene38582.t1 | MTR_4g130800 | 38.272 | 81 | 44 | 1 | 25 | 99 | 48 | 128 | 5.87e-11 | 59.3 |
| MS.gene38582.t1 | MTR_3g089035 | 37.113 | 97 | 52 | 3 | 7 | 97 | 30 | 123 | 6.03e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38582.t1 | AT1G72230 | 46.207 | 145 | 62 | 3 | 18 | 152 | 31 | 169 | 7.17e-33 | 115 |
| MS.gene38582.t1 | AT1G22480 | 54.255 | 94 | 38 | 1 | 16 | 104 | 25 | 118 | 5.62e-25 | 95.1 |
| MS.gene38582.t1 | AT2G32300 | 41.379 | 116 | 62 | 1 | 5 | 114 | 21 | 136 | 7.04e-23 | 91.7 |
| MS.gene38582.t1 | AT2G32300 | 41.379 | 116 | 62 | 1 | 5 | 114 | 51 | 166 | 1.54e-22 | 91.3 |
| MS.gene38582.t1 | AT2G31050 | 33.962 | 159 | 83 | 3 | 7 | 143 | 26 | 184 | 7.72e-22 | 87.4 |
| MS.gene38582.t1 | AT2G26720 | 39.823 | 113 | 61 | 2 | 7 | 112 | 26 | 138 | 1.83e-21 | 86.7 |
| MS.gene38582.t1 | AT3G60270 | 44.000 | 100 | 51 | 1 | 5 | 99 | 21 | 120 | 2.18e-21 | 85.9 |
| MS.gene38582.t1 | AT5G07475 | 37.762 | 143 | 73 | 4 | 7 | 140 | 27 | 162 | 1.60e-20 | 84.0 |
| MS.gene38582.t1 | AT3G27200 | 38.000 | 100 | 56 | 2 | 6 | 99 | 22 | 121 | 3.95e-18 | 77.4 |
| MS.gene38582.t1 | AT2G44790 | 46.316 | 95 | 44 | 2 | 18 | 105 | 36 | 130 | 5.63e-18 | 77.4 |
| MS.gene38582.t1 | AT3G17675 | 35.514 | 107 | 63 | 1 | 1 | 101 | 23 | 129 | 2.61e-17 | 73.9 |
| MS.gene38582.t1 | AT5G20230 | 35.976 | 164 | 81 | 6 | 10 | 149 | 25 | 188 | 1.47e-14 | 68.2 |
| MS.gene38582.t1 | AT5G26330 | 36.634 | 101 | 56 | 2 | 7 | 99 | 21 | 121 | 8.27e-14 | 66.2 |
| MS.gene38582.t1 | AT3G60280 | 37.607 | 117 | 68 | 1 | 6 | 117 | 20 | 136 | 1.54e-11 | 60.5 |
| MS.gene38582.t1 | AT5G53870 | 28.571 | 147 | 92 | 3 | 12 | 145 | 32 | 178 | 3.47e-11 | 60.5 |
| MS.gene38582.t1 | AT5G53870 | 28.571 | 147 | 92 | 3 | 12 | 145 | 32 | 178 | 3.99e-11 | 60.5 |
Find 42 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTATGGCATTGCCGACTA+TGG | 0.299229 | 3.3:-82002092 | None:intergenic |
| ATTCCTAGACATTGCACATT+TGG | 0.319782 | 3.3:-82001718 | MS.gene38582:CDS |
| CACATTGTTGGAGATGGTTT+AGG | 0.350314 | 3.3:-82002061 | MS.gene38582:CDS |
| TGGCATGAAACTCTCTGTTA+AGG | 0.390798 | 3.3:-82001698 | MS.gene38582:CDS |
| GATCTCTATCCGTCATATAT+TGG | 0.416236 | 3.3:-82001506 | MS.gene38582:CDS |
| GATGGTTTAGGTTGGACAAT+TGG | 0.425937 | 3.3:-82002049 | MS.gene38582:CDS |
| CTAGCCCATGTAGTGTAATC+AGG | 0.453147 | 3.3:+82002025 | None:intergenic |
| TATATGACGGATAGAGATCC+AGG | 0.466675 | 3.3:+82001510 | None:intergenic |
| TTCCAGCTGTGCATAATGTA+TGG | 0.484126 | 3.3:+82001818 | None:intergenic |
| ATGGCAACAACCCACATTGT+TGG | 0.499388 | 3.3:-82002073 | MS.gene38582:CDS |
| ATGCCAAATGTGCAATGTCT+AGG | 0.500016 | 3.3:+82001715 | None:intergenic |
| GACCATACATTATGCACAGC+TGG | 0.503333 | 3.3:-82001820 | MS.gene38582:CDS |
| TTGGTCCTGATTACACTACA+TGG | 0.504799 | 3.3:-82002030 | MS.gene38582:CDS |
| ATCGGAAGGTGAACCTTTCG+TGG | 0.505016 | 3.3:+82001633 | None:intergenic |
| GCAGAAGGAGCGGCAGAAGA+AGG | 0.505108 | 3.3:+82001670 | None:intergenic |
| GGTGGTGGTTGTTGCGGCAG+CGG | 0.517819 | 3.3:+82001606 | None:intergenic |
| AACAATTGGTGAGATATTAG+TGG | 0.520976 | 3.3:+82001552 | None:intergenic |
| TGTTGCGGCAGCGGTGCGAT+CGG | 0.526820 | 3.3:+82001615 | None:intergenic |
| GCGGCAGCGGTGCGATCGGA+AGG | 0.527471 | 3.3:+82001619 | None:intergenic |
| ACAACCCACATTGTTGGAGA+TGG | 0.532220 | 3.3:-82002067 | MS.gene38582:CDS |
| GAAGGTGAACCTTTCGTGGA+TGG | 0.547718 | 3.3:+82001637 | None:intergenic |
| TTTGCAGTTGGTGACAGTCT+CGG | 0.554211 | 3.3:-82001992 | MS.gene38582:intron |
| TGTGGTAGGAGTAGTGGTGG+TGG | 0.559960 | 3.3:+82001591 | None:intergenic |
| ATGTGGGTTGTTGCCATAGT+CGG | 0.565131 | 3.3:+82002079 | None:intergenic |
| GAAGATGCACTTTGTGTGGT+AGG | 0.585213 | 3.3:+82001577 | None:intergenic |
| TTGTTGGAGATGGTTTAGGT+TGG | 0.586690 | 3.3:-82002057 | MS.gene38582:CDS |
| AGTGACAAAACCTTTGCAGT+TGG | 0.590211 | 3.3:-82002004 | MS.gene38582:CDS |
| GAACCTTTCGTGGATGGTGA+TGG | 0.595492 | 3.3:+82001643 | None:intergenic |
| AGTAGTGGTGGTGGTTGTTG+CGG | 0.603984 | 3.3:+82001600 | None:intergenic |
| GATGGTGATGGTGTTGCAGA+AGG | 0.618024 | 3.3:+82001655 | None:intergenic |
| ACTTTGTGTGGTAGGAGTAG+TGG | 0.618884 | 3.3:+82001585 | None:intergenic |
| GAGACTGTCACCAACTGCAA+AGG | 0.629029 | 3.3:+82001994 | None:intergenic |
| TGGTCCTGATTACACTACAT+GGG | 0.630389 | 3.3:-82002029 | MS.gene38582:CDS |
| TAAACCATCTCCAACAATGT+GGG | 0.636144 | 3.3:+82002063 | None:intergenic |
| ACACCATCACCATCCACGAA+AGG | 0.636152 | 3.3:-82001646 | MS.gene38582:CDS |
| GGCTGAAGATGCACTTTGTG+TGG | 0.645311 | 3.3:+82001573 | None:intergenic |
| TATCTCACACCAATATATGA+CGG | 0.646155 | 3.3:+82001497 | None:intergenic |
| TTGTGTGGTAGGAGTAGTGG+TGG | 0.649594 | 3.3:+82001588 | None:intergenic |
| TCAATTAATACAGACAGCAG+TGG | 0.671855 | 3.3:-82001793 | MS.gene38582:CDS |
| CTAAACCATCTCCAACAATG+TGG | 0.675206 | 3.3:+82002062 | None:intergenic |
| TGATGGTGTTGCAGAAGGAG+CGG | 0.712627 | 3.3:+82001660 | None:intergenic |
| CTATGTAGCTGGGCACACAG+TGG | 0.727318 | 3.3:-82001860 | MS.gene38582:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACAATTGGTGAGATATTAG+TGG | + | chr3.3:82002040-82002059 | None:intergenic | 30.0% | |
| GTGAAAAAGAAAGCAACAAT+TGG | + | chr3.3:82002054-82002073 | None:intergenic | 30.0% | |
| !!! | AATGTGTTCCTGCTTTTTTT+AGG | + | chr3.3:82001837-82001856 | None:intergenic | 30.0% |
| !!! | ATGTGTTCCTGCTTTTTTTA+GGG | + | chr3.3:82001836-82001855 | None:intergenic | 30.0% |
| ATTCCTAGACATTGCACATT+TGG | - | chr3.3:82001871-82001890 | MS.gene38582:intron | 35.0% | |
| GATCTCTATCCGTCATATAT+TGG | - | chr3.3:82002083-82002102 | MS.gene38582:CDS | 35.0% | |
| TAAACCATCTCCAACAATGT+GGG | + | chr3.3:82001529-82001548 | None:intergenic | 35.0% | |
| TCAATTAATACAGACAGCAG+TGG | - | chr3.3:82001796-82001815 | MS.gene38582:CDS | 35.0% | |
| !!! | TGTGTTCCTGCTTTTTTTAG+GGG | + | chr3.3:82001835-82001854 | None:intergenic | 35.0% |
| !!! | TTTTTTTAGGGGAATGGTTG+TGG | + | chr3.3:82001824-82001843 | None:intergenic | 35.0% |
| ACAGTGTTCAACTATGTAGC+TGG | - | chr3.3:82001718-82001737 | MS.gene38582:CDS | 40.0% | |
| ACCATTCCCCTAAAAAAAGC+AGG | - | chr3.3:82001826-82001845 | MS.gene38582:CDS | 40.0% | |
| AGTGACAAAACCTTTGCAGT+TGG | - | chr3.3:82001585-82001604 | MS.gene38582:CDS | 40.0% | |
| ATGCCAAATGTGCAATGTCT+AGG | + | chr3.3:82001877-82001896 | None:intergenic | 40.0% | |
| CACATTGTTGGAGATGGTTT+AGG | - | chr3.3:82001528-82001547 | MS.gene38582:CDS | 40.0% | |
| CAGTGTTCAACTATGTAGCT+GGG | - | chr3.3:82001719-82001738 | MS.gene38582:CDS | 40.0% | |
| CTAAACCATCTCCAACAATG+TGG | + | chr3.3:82001530-82001549 | None:intergenic | 40.0% | |
| TGGCATGAAACTCTCTGTTA+AGG | - | chr3.3:82001891-82001910 | MS.gene38582:intron | 40.0% | |
| TGGTCCTGATTACACTACAT+GGG | - | chr3.3:82001560-82001579 | MS.gene38582:CDS | 40.0% | |
| TTCCAGCTGTGCATAATGTA+TGG | + | chr3.3:82001774-82001793 | None:intergenic | 40.0% | |
| TTGGTCCTGATTACACTACA+TGG | - | chr3.3:82001559-82001578 | MS.gene38582:CDS | 40.0% | |
| TTGTTGGAGATGGTTTAGGT+TGG | - | chr3.3:82001532-82001551 | MS.gene38582:CDS | 40.0% | |
| !! | CTTTCTTTTTCACTGCTTCC+TGG | - | chr3.3:82002061-82002080 | MS.gene38582:CDS | 40.0% |
| !! | GATGGTTTAGGTTGGACAAT+TGG | - | chr3.3:82001540-82001559 | MS.gene38582:CDS | 40.0% |
| !! | TATATGACGGATAGAGATCC+AGG | + | chr3.3:82002082-82002101 | None:intergenic | 40.0% |
| !!! | TCCTGCTTTTTTTAGGGGAA+TGG | + | chr3.3:82001830-82001849 | None:intergenic | 40.0% |
| ACAACCCACATTGTTGGAGA+TGG | - | chr3.3:82001522-82001541 | MS.gene38582:CDS | 45.0% | |
| ACTTTGTGTGGTAGGAGTAG+TGG | + | chr3.3:82002007-82002026 | None:intergenic | 45.0% | |
| ATGGCAACAACCCACATTGT+TGG | - | chr3.3:82001516-82001535 | MS.gene38582:CDS | 45.0% | |
| CTAGCCCATGTAGTGTAATC+AGG | + | chr3.3:82001567-82001586 | None:intergenic | 45.0% | |
| GAAGATGCACTTTGTGTGGT+AGG | + | chr3.3:82002015-82002034 | None:intergenic | 45.0% | |
| GACCATACATTATGCACAGC+TGG | - | chr3.3:82001769-82001788 | MS.gene38582:CDS | 45.0% | |
| ! | ATGTGGGTTGTTGCCATAGT+CGG | + | chr3.3:82001513-82001532 | None:intergenic | 45.0% |
| !! | TTTGCAGTTGGTGACAGTCT+CGG | - | chr3.3:82001597-82001616 | MS.gene38582:CDS | 45.0% |
| ACACCATCACCATCCACGAA+AGG | - | chr3.3:82001943-82001962 | MS.gene38582:intron | 50.0% | |
| ATCGGAAGGTGAACCTTTCG+TGG | + | chr3.3:82001959-82001978 | None:intergenic | 50.0% | |
| GAACCTTTCGTGGATGGTGA+TGG | + | chr3.3:82001949-82001968 | None:intergenic | 50.0% | |
| GAAGGTGAACCTTTCGTGGA+TGG | + | chr3.3:82001955-82001974 | None:intergenic | 50.0% | |
| GAGACTGTCACCAACTGCAA+AGG | + | chr3.3:82001598-82001617 | None:intergenic | 50.0% | |
| GGCTGAAGATGCACTTTGTG+TGG | + | chr3.3:82002019-82002038 | None:intergenic | 50.0% | |
| TTGTGTGGTAGGAGTAGTGG+TGG | + | chr3.3:82002004-82002023 | None:intergenic | 50.0% | |
| !! | AGTAGTGGTGGTGGTTGTTG+CGG | + | chr3.3:82001992-82002011 | None:intergenic | 50.0% |
| !! | GATGGTGATGGTGTTGCAGA+AGG | + | chr3.3:82001937-82001956 | None:intergenic | 50.0% |
| !! | TGATGGTGTTGCAGAAGGAG+CGG | + | chr3.3:82001932-82001951 | None:intergenic | 50.0% |
| CTATGTAGCTGGGCACACAG+TGG | - | chr3.3:82001729-82001748 | MS.gene38582:CDS | 55.0% | |
| TGTGGTAGGAGTAGTGGTGG+TGG | + | chr3.3:82002001-82002020 | None:intergenic | 55.0% | |
| GCAGAAGGAGCGGCAGAAGA+AGG | + | chr3.3:82001922-82001941 | None:intergenic | 60.0% | |
| TGTTGCGGCAGCGGTGCGAT+CGG | + | chr3.3:82001977-82001996 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTTGTTGCGGCAG+CGG | + | chr3.3:82001986-82002005 | None:intergenic | 65.0% |
| GCGGCAGCGGTGCGATCGGA+AGG | + | chr3.3:82001973-82001992 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 82001501 | 82002110 | 82001501 | ID=MS.gene38582 |
| chr3.3 | mRNA | 82001501 | 82002110 | 82001501 | ID=MS.gene38582.t1;Parent=MS.gene38582 |
| chr3.3 | exon | 82001993 | 82002110 | 82001993 | ID=MS.gene38582.t1.exon1;Parent=MS.gene38582.t1 |
| chr3.3 | CDS | 82001993 | 82002110 | 82001993 | ID=cds.MS.gene38582.t1;Parent=MS.gene38582.t1 |
| chr3.3 | exon | 82001501 | 82001874 | 82001501 | ID=MS.gene38582.t1.exon2;Parent=MS.gene38582.t1 |
| chr3.3 | CDS | 82001501 | 82001874 | 82001501 | ID=cds.MS.gene38582.t1;Parent=MS.gene38582.t1 |
| Gene Sequence |
| Protein sequence |
