Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38698.t1 | XP_003603074.1 | 98.9 | 622 | 7 | 0 | 1 | 622 | 1 | 622 | 0.00E+00 | 1214.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38698.t1 | P42731 | 66.6 | 599 | 190 | 6 | 24 | 617 | 36 | 629 | 3.4e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38698.t1 | G7J6Y1 | 98.9 | 622 | 7 | 0 | 1 | 622 | 1 | 622 | 0.0e+00 | 1214.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051963 | MS.gene38698 | 0.851288 | 9.78E-61 | -1.69E-46 |
| MS.gene052275 | MS.gene38698 | 0.812651 | 3.81E-51 | -1.69E-46 |
| MS.gene056508 | MS.gene38698 | -0.829226 | 5.79E-55 | -1.69E-46 |
| MS.gene06080 | MS.gene38698 | 0.801667 | 8.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38698.t1 | MTR_3g102040 | 98.875 | 622 | 7 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1277 |
| MS.gene38698.t1 | MTR_1g019150 | 74.359 | 624 | 138 | 6 | 17 | 619 | 25 | 647 | 0.0 | 891 |
| MS.gene38698.t1 | MTR_4g085540 | 72.358 | 615 | 144 | 5 | 20 | 610 | 30 | 642 | 0.0 | 882 |
| MS.gene38698.t1 | MTR_1g097440 | 56.426 | 638 | 234 | 15 | 13 | 617 | 19 | 645 | 0.0 | 666 |
| MS.gene38698.t1 | MTR_6g040190 | 51.299 | 616 | 256 | 14 | 13 | 601 | 14 | 612 | 0.0 | 571 |
| MS.gene38698.t1 | MTR_7g102730 | 46.078 | 612 | 292 | 11 | 17 | 598 | 3 | 606 | 2.13e-157 | 466 |
| MS.gene38698.t1 | MTR_6g040070 | 55.208 | 384 | 158 | 8 | 98 | 472 | 1 | 379 | 5.24e-137 | 419 |
| MS.gene38698.t1 | MTR_6g040070 | 36.585 | 287 | 163 | 5 | 25 | 294 | 16 | 300 | 4.13e-45 | 172 |
| MS.gene38698.t1 | MTR_6g040070 | 36.453 | 203 | 106 | 5 | 24 | 207 | 105 | 303 | 1.17e-27 | 119 |
| MS.gene38698.t1 | MTR_1g061870 | 43.936 | 437 | 224 | 6 | 25 | 459 | 16 | 433 | 4.17e-112 | 346 |
| MS.gene38698.t1 | MTR_1g061870 | 33.333 | 186 | 111 | 2 | 24 | 197 | 194 | 378 | 3.48e-25 | 110 |
| MS.gene38698.t1 | MTR_3g065190 | 39.766 | 171 | 100 | 3 | 25 | 193 | 26 | 195 | 1.34e-30 | 124 |
| MS.gene38698.t1 | MTR_3g065190 | 31.937 | 191 | 118 | 6 | 105 | 292 | 18 | 199 | 4.36e-20 | 93.2 |
| MS.gene38698.t1 | MTR_3g065190 | 32.447 | 188 | 107 | 5 | 206 | 390 | 28 | 198 | 6.06e-19 | 89.7 |
| MS.gene38698.t1 | MTR_2g022950 | 28.137 | 263 | 162 | 8 | 25 | 265 | 61 | 318 | 4.64e-27 | 114 |
| MS.gene38698.t1 | MTR_2g022950 | 25.912 | 274 | 179 | 8 | 114 | 374 | 62 | 324 | 5.20e-21 | 96.3 |
| MS.gene38698.t1 | MTR_2g022950 | 30.601 | 183 | 100 | 7 | 18 | 182 | 153 | 326 | 6.58e-13 | 71.2 |
| MS.gene38698.t1 | MTR_2g022950 | 24.413 | 213 | 149 | 5 | 175 | 384 | 32 | 235 | 1.44e-11 | 67.0 |
| MS.gene38698.t1 | MTR_1g020080 | 25.532 | 282 | 201 | 5 | 114 | 391 | 99 | 375 | 3.76e-26 | 112 |
| MS.gene38698.t1 | MTR_1g020080 | 28.077 | 260 | 163 | 6 | 25 | 265 | 98 | 352 | 1.24e-24 | 107 |
| MS.gene38698.t1 | MTR_1g020080 | 32.044 | 181 | 101 | 4 | 19 | 182 | 185 | 360 | 3.16e-19 | 90.9 |
| MS.gene38698.t1 | MTR_1g020080 | 24.607 | 191 | 130 | 4 | 198 | 385 | 92 | 271 | 3.68e-11 | 65.9 |
| MS.gene38698.t1 | MTR_4g131970 | 27.757 | 263 | 162 | 9 | 25 | 265 | 75 | 331 | 8.27e-25 | 107 |
| MS.gene38698.t1 | MTR_4g131970 | 24.648 | 284 | 199 | 8 | 114 | 387 | 76 | 354 | 1.59e-19 | 91.7 |
| MS.gene38698.t1 | MTR_3g101370 | 25.874 | 286 | 183 | 8 | 25 | 286 | 94 | 374 | 4.71e-24 | 105 |
| MS.gene38698.t1 | MTR_3g101370 | 24.252 | 301 | 214 | 6 | 99 | 390 | 76 | 371 | 8.40e-23 | 101 |
| MS.gene38698.t1 | MTR_3g109090 | 26.429 | 280 | 165 | 7 | 25 | 271 | 45 | 316 | 1.07e-22 | 101 |
| MS.gene38698.t1 | MTR_3g109090 | 25.967 | 181 | 115 | 4 | 204 | 383 | 45 | 207 | 1.06e-13 | 73.9 |
| MS.gene38698.t1 | MTR_3g109090 | 26.429 | 280 | 165 | 7 | 25 | 271 | 61 | 332 | 1.76e-22 | 100 |
| MS.gene38698.t1 | MTR_3g109090 | 25.967 | 181 | 115 | 4 | 204 | 383 | 61 | 223 | 1.32e-13 | 73.6 |
| MS.gene38698.t1 | MTR_4g124940 | 27.338 | 278 | 160 | 7 | 22 | 266 | 44 | 312 | 2.18e-22 | 100 |
| MS.gene38698.t1 | MTR_4g124940 | 27.597 | 308 | 190 | 9 | 97 | 383 | 31 | 326 | 1.98e-20 | 94.4 |
| MS.gene38698.t1 | MTR_8g022050 | 27.143 | 280 | 162 | 7 | 22 | 268 | 60 | 330 | 2.51e-22 | 100 |
| MS.gene38698.t1 | MTR_8g022050 | 26.490 | 302 | 186 | 10 | 103 | 383 | 57 | 343 | 6.74e-17 | 84.0 |
| MS.gene38698.t1 | MTR_2g097960 | 25.887 | 282 | 164 | 7 | 25 | 266 | 16 | 292 | 7.53e-22 | 99.0 |
| MS.gene38698.t1 | MTR_2g097960 | 25.946 | 185 | 123 | 5 | 204 | 385 | 16 | 189 | 1.20e-14 | 77.0 |
| MS.gene38698.t1 | MTR_4g086600 | 26.429 | 280 | 162 | 8 | 25 | 265 | 117 | 391 | 5.98e-21 | 96.7 |
| MS.gene38698.t1 | MTR_4g086600 | 24.756 | 307 | 190 | 11 | 114 | 390 | 118 | 413 | 3.83e-16 | 81.6 |
| MS.gene38698.t1 | MTR_4g086600 | 28.646 | 192 | 128 | 5 | 197 | 385 | 110 | 295 | 4.70e-13 | 72.0 |
| MS.gene38698.t1 | MTR_1723s0010 | 67.925 | 53 | 17 | 0 | 25 | 77 | 26 | 78 | 2.86e-19 | 82.8 |
| MS.gene38698.t1 | MTR_4g052940 | 27.888 | 251 | 163 | 7 | 17 | 261 | 105 | 343 | 4.33e-19 | 91.3 |
| MS.gene38698.t1 | MTR_4g052940 | 27.869 | 244 | 160 | 6 | 24 | 261 | 110 | 343 | 2.60e-18 | 87.4 |
| MS.gene38698.t1 | MTR_0989s0020 | 59.155 | 71 | 28 | 1 | 539 | 608 | 11 | 81 | 1.11e-17 | 78.6 |
| MS.gene38698.t1 | MTR_1889s0010 | 61.818 | 55 | 21 | 0 | 25 | 79 | 21 | 75 | 1.15e-17 | 78.6 |
| MS.gene38698.t1 | MTR_2g022950 | 27.647 | 170 | 114 | 4 | 25 | 185 | 61 | 230 | 1.21e-17 | 84.0 |
| MS.gene38698.t1 | MTR_2g022950 | 24.413 | 213 | 149 | 5 | 175 | 384 | 32 | 235 | 1.09e-11 | 66.2 |
| MS.gene38698.t1 | MTR_7g010360 | 28.287 | 251 | 162 | 7 | 17 | 261 | 345 | 583 | 5.52e-17 | 85.5 |
| MS.gene38698.t1 | MTR_2g022950 | 27.647 | 170 | 114 | 4 | 25 | 185 | 61 | 230 | 8.80e-17 | 81.6 |
| MS.gene38698.t1 | MTR_2g022950 | 25.543 | 184 | 125 | 5 | 204 | 384 | 61 | 235 | 2.38e-11 | 65.5 |
| MS.gene38698.t1 | MTR_7g118120 | 23.622 | 254 | 175 | 5 | 24 | 269 | 104 | 346 | 9.59e-17 | 84.0 |
| MS.gene38698.t1 | MTR_7g118120 | 26.207 | 290 | 180 | 10 | 107 | 388 | 99 | 362 | 4.24e-12 | 69.3 |
| MS.gene38698.t1 | MTR_3g101370 | 27.219 | 169 | 115 | 4 | 25 | 185 | 94 | 262 | 1.21e-16 | 81.6 |
| MS.gene38698.t1 | MTR_3g101370 | 25.521 | 192 | 134 | 5 | 99 | 281 | 76 | 267 | 2.40e-12 | 68.6 |
| MS.gene38698.t1 | MTR_3g075500 | 31.183 | 186 | 117 | 5 | 205 | 387 | 111 | 288 | 1.93e-16 | 80.9 |
| MS.gene38698.t1 | MTR_3g075500 | 29.885 | 174 | 115 | 4 | 112 | 278 | 109 | 282 | 2.83e-14 | 74.3 |
| MS.gene38698.t1 | MTR_3g075500 | 28.000 | 175 | 104 | 4 | 26 | 184 | 111 | 279 | 1.03e-12 | 69.7 |
| MS.gene38698.t1 | MTR_3g027140 | 32.778 | 180 | 112 | 5 | 205 | 381 | 62 | 235 | 6.11e-16 | 78.2 |
| MS.gene38698.t1 | MTR_3g027140 | 26.744 | 172 | 112 | 4 | 26 | 184 | 62 | 232 | 5.66e-12 | 66.2 |
| MS.gene38698.t1 | MTR_8g076100 | 25.769 | 260 | 163 | 9 | 26 | 270 | 420 | 664 | 6.15e-16 | 82.4 |
| MS.gene38698.t1 | MTR_8g076100 | 25.769 | 260 | 163 | 9 | 26 | 270 | 420 | 664 | 7.57e-16 | 82.0 |
| MS.gene38698.t1 | MTR_8g076100 | 25.769 | 260 | 163 | 9 | 26 | 270 | 420 | 664 | 9.98e-16 | 81.6 |
| MS.gene38698.t1 | MTR_8g007390 | 23.413 | 252 | 174 | 7 | 26 | 268 | 216 | 457 | 1.06e-15 | 81.3 |
| MS.gene38698.t1 | MTR_8g007390 | 23.413 | 252 | 174 | 7 | 26 | 268 | 217 | 458 | 1.10e-15 | 81.3 |
| MS.gene38698.t1 | MTR_1g020080 | 28.571 | 168 | 113 | 4 | 25 | 185 | 98 | 265 | 1.52e-15 | 78.2 |
| MS.gene38698.t1 | MTR_1g020080 | 24.607 | 191 | 130 | 4 | 198 | 385 | 92 | 271 | 3.73e-11 | 65.1 |
| MS.gene38698.t1 | MTR_7g104800 | 24.206 | 252 | 170 | 9 | 24 | 269 | 101 | 337 | 5.75e-15 | 78.2 |
| MS.gene38698.t1 | MTR_7g106440 | 27.684 | 177 | 104 | 3 | 26 | 182 | 111 | 283 | 9.22e-15 | 76.3 |
| MS.gene38698.t1 | MTR_7g106440 | 32.124 | 193 | 121 | 7 | 190 | 376 | 95 | 283 | 2.86e-14 | 74.7 |
| MS.gene38698.t1 | MTR_1g056520 | 29.412 | 170 | 106 | 3 | 26 | 182 | 110 | 278 | 3.82e-14 | 74.3 |
| MS.gene38698.t1 | MTR_1g056520 | 30.114 | 176 | 112 | 5 | 205 | 376 | 110 | 278 | 1.12e-13 | 72.8 |
| MS.gene38698.t1 | MTR_4g104470 | 30.645 | 186 | 115 | 5 | 205 | 387 | 124 | 298 | 4.29e-14 | 73.9 |
| MS.gene38698.t1 | MTR_4g104470 | 26.946 | 167 | 113 | 3 | 26 | 184 | 124 | 289 | 9.39e-13 | 69.7 |
| MS.gene38698.t1 | MTR_1g045510 | 32.418 | 182 | 108 | 3 | 205 | 384 | 115 | 283 | 4.67e-14 | 73.6 |
| MS.gene38698.t1 | MTR_3g075500 | 31.953 | 169 | 104 | 5 | 205 | 370 | 111 | 271 | 5.21e-14 | 73.2 |
| MS.gene38698.t1 | MTR_3g075500 | 30.864 | 162 | 105 | 4 | 112 | 266 | 109 | 270 | 7.36e-14 | 72.8 |
| MS.gene38698.t1 | MTR_3g075500 | 28.144 | 167 | 98 | 4 | 26 | 176 | 111 | 271 | 7.30e-12 | 66.6 |
| MS.gene38698.t1 | MTR_7g107580 | 27.437 | 277 | 154 | 10 | 205 | 459 | 18 | 269 | 1.08e-13 | 73.6 |
| MS.gene38698.t1 | MTR_7g107580 | 27.437 | 277 | 154 | 10 | 205 | 459 | 18 | 269 | 2.96e-13 | 72.8 |
| MS.gene38698.t1 | MTR_0913s0010 | 61.667 | 60 | 22 | 1 | 543 | 601 | 1 | 60 | 4.41e-13 | 65.1 |
| MS.gene38698.t1 | MTR_2g070540 | 29.310 | 174 | 105 | 6 | 25 | 185 | 114 | 282 | 7.79e-13 | 70.1 |
| MS.gene38698.t1 | MTR_4g068120 | 30.387 | 181 | 95 | 6 | 198 | 378 | 22 | 171 | 1.06e-12 | 72.0 |
| MS.gene38698.t1 | MTR_7g099940 | 41.975 | 81 | 46 | 1 | 308 | 387 | 37 | 117 | 4.01e-12 | 64.7 |
| MS.gene38698.t1 | MTR_5g030020 | 28.272 | 191 | 124 | 6 | 197 | 384 | 91 | 271 | 8.02e-12 | 67.4 |
| MS.gene38698.t1 | MTR_7g107580 | 27.338 | 278 | 154 | 11 | 205 | 459 | 18 | 270 | 9.27e-12 | 67.8 |
| MS.gene38698.t1 | MTR_4g122650 | 27.097 | 155 | 106 | 3 | 26 | 175 | 90 | 242 | 1.02e-11 | 68.6 |
| MS.gene38698.t1 | MTR_4g122650 | 26.923 | 156 | 110 | 3 | 112 | 265 | 88 | 241 | 2.90e-11 | 67.0 |
| MS.gene38698.t1 | MTR_7g094660 | 29.268 | 246 | 141 | 11 | 170 | 397 | 605 | 835 | 1.65e-11 | 67.8 |
| MS.gene38698.t1 | MTR_1g064230 | 28.708 | 209 | 135 | 4 | 192 | 388 | 73 | 279 | 3.88e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38698.t1 | AT4G34110 | 68.781 | 599 | 177 | 6 | 24 | 617 | 36 | 629 | 0.0 | 812 |
| MS.gene38698.t1 | AT4G34110 | 34.948 | 289 | 171 | 3 | 110 | 397 | 34 | 306 | 1.22e-51 | 188 |
| MS.gene38698.t1 | AT4G34110 | 34.483 | 203 | 115 | 4 | 19 | 205 | 210 | 410 | 2.20e-27 | 117 |
| MS.gene38698.t1 | AT1G49760 | 65.655 | 626 | 187 | 4 | 23 | 620 | 44 | 669 | 0.0 | 793 |
| MS.gene38698.t1 | AT1G49760 | 65.655 | 626 | 187 | 4 | 23 | 620 | 44 | 669 | 0.0 | 793 |
| MS.gene38698.t1 | AT2G23350 | 63.666 | 622 | 196 | 8 | 24 | 620 | 46 | 662 | 0.0 | 761 |
| MS.gene38698.t1 | AT1G71770 | 54.173 | 635 | 234 | 15 | 24 | 615 | 59 | 679 | 0.0 | 608 |
| MS.gene38698.t1 | AT1G71770 | 54.173 | 635 | 234 | 15 | 24 | 615 | 59 | 679 | 0.0 | 608 |
| MS.gene38698.t1 | AT1G22760 | 53.945 | 621 | 251 | 10 | 24 | 618 | 49 | 660 | 0.0 | 603 |
| MS.gene38698.t1 | AT2G36660 | 39.900 | 599 | 301 | 11 | 22 | 598 | 22 | 583 | 1.03e-125 | 384 |
| MS.gene38698.t1 | AT1G34140 | 47.959 | 392 | 172 | 8 | 82 | 462 | 1 | 371 | 2.25e-112 | 343 |
| MS.gene38698.t1 | AT1G34140 | 35.714 | 280 | 163 | 4 | 25 | 289 | 32 | 309 | 1.68e-44 | 164 |
| MS.gene38698.t1 | AT1G34140 | 32.000 | 200 | 113 | 4 | 24 | 204 | 119 | 314 | 4.43e-25 | 108 |
| MS.gene38698.t1 | AT3G16380 | 44.845 | 388 | 208 | 4 | 25 | 408 | 22 | 407 | 5.11e-101 | 318 |
| MS.gene38698.t1 | AT3G16380 | 35.577 | 208 | 111 | 5 | 8 | 197 | 187 | 389 | 1.10e-26 | 115 |
| MS.gene38698.t1 | AT3G16380 | 35.714 | 196 | 111 | 5 | 195 | 389 | 13 | 194 | 3.29e-25 | 110 |
| MS.gene38698.t1 | AT2G18510 | 36.842 | 171 | 105 | 3 | 25 | 193 | 26 | 195 | 1.11e-27 | 115 |
| MS.gene38698.t1 | AT2G18510 | 30.159 | 189 | 112 | 5 | 205 | 390 | 27 | 198 | 6.07e-17 | 83.6 |
| MS.gene38698.t1 | AT1G11650 | 29.643 | 280 | 168 | 10 | 10 | 265 | 44 | 318 | 1.13e-27 | 116 |
| MS.gene38698.t1 | AT1G11650 | 25.581 | 301 | 209 | 9 | 104 | 395 | 51 | 345 | 3.70e-20 | 93.6 |
| MS.gene38698.t1 | AT5G54900 | 26.792 | 265 | 168 | 8 | 25 | 268 | 61 | 320 | 2.59e-27 | 114 |
| MS.gene38698.t1 | AT5G54900 | 24.573 | 293 | 202 | 9 | 113 | 396 | 61 | 343 | 4.84e-20 | 93.2 |
| MS.gene38698.t1 | AT5G54900 | 26.471 | 204 | 137 | 6 | 184 | 384 | 41 | 234 | 1.55e-15 | 79.3 |
| MS.gene38698.t1 | AT1G11650 | 28.679 | 265 | 160 | 9 | 10 | 250 | 44 | 303 | 2.51e-25 | 107 |
| MS.gene38698.t1 | AT1G11650 | 26.616 | 263 | 172 | 9 | 104 | 354 | 51 | 304 | 1.60e-17 | 84.3 |
| MS.gene38698.t1 | AT4G27000 | 25.379 | 264 | 171 | 8 | 25 | 268 | 81 | 338 | 2.53e-25 | 109 |
| MS.gene38698.t1 | AT4G27000 | 24.188 | 277 | 189 | 7 | 113 | 379 | 81 | 346 | 5.92e-19 | 90.1 |
| MS.gene38698.t1 | AT4G27000 | 27.315 | 216 | 129 | 6 | 195 | 407 | 72 | 262 | 1.22e-16 | 83.2 |
| MS.gene38698.t1 | AT1G47490 | 25.070 | 359 | 232 | 9 | 87 | 413 | 71 | 424 | 2.53e-25 | 109 |
| MS.gene38698.t1 | AT1G47490 | 27.974 | 311 | 186 | 11 | 25 | 309 | 102 | 400 | 2.38e-24 | 106 |
| MS.gene38698.t1 | AT3G14100 | 28.214 | 280 | 159 | 7 | 22 | 268 | 57 | 327 | 2.24e-24 | 106 |
| MS.gene38698.t1 | AT3G14100 | 28.723 | 282 | 164 | 10 | 103 | 363 | 54 | 319 | 1.38e-18 | 89.0 |
| MS.gene38698.t1 | AT3G14100 | 29.834 | 181 | 108 | 4 | 204 | 383 | 60 | 222 | 1.66e-15 | 79.7 |
| MS.gene38698.t1 | AT1G54080 | 27.500 | 280 | 161 | 7 | 22 | 268 | 61 | 331 | 2.26e-24 | 106 |
| MS.gene38698.t1 | AT1G54080 | 27.491 | 291 | 168 | 9 | 103 | 369 | 58 | 329 | 2.62e-18 | 88.2 |
| MS.gene38698.t1 | AT1G54080 | 29.834 | 181 | 108 | 4 | 204 | 383 | 64 | 226 | 2.06e-15 | 79.3 |
| MS.gene38698.t1 | AT1G54080 | 27.465 | 284 | 160 | 8 | 22 | 268 | 61 | 335 | 5.72e-23 | 102 |
| MS.gene38698.t1 | AT1G54080 | 27.458 | 295 | 167 | 10 | 103 | 369 | 58 | 333 | 5.60e-17 | 84.3 |
| MS.gene38698.t1 | AT1G54080 | 29.730 | 185 | 107 | 5 | 204 | 383 | 64 | 230 | 3.85e-14 | 75.5 |
| MS.gene38698.t1 | AT1G47500 | 27.974 | 311 | 186 | 12 | 25 | 309 | 104 | 402 | 7.14e-23 | 102 |
| MS.gene38698.t1 | AT1G47500 | 27.356 | 329 | 202 | 11 | 114 | 414 | 105 | 424 | 1.57e-22 | 101 |
| MS.gene38698.t1 | AT1G47500 | 25.581 | 215 | 145 | 6 | 186 | 395 | 86 | 290 | 1.51e-11 | 67.4 |
| MS.gene38698.t1 | AT3G19130 | 27.113 | 284 | 171 | 8 | 114 | 372 | 110 | 382 | 6.88e-22 | 99.4 |
| MS.gene38698.t1 | AT3G19130 | 27.338 | 278 | 157 | 9 | 25 | 265 | 109 | 378 | 1.48e-21 | 98.2 |
| MS.gene38698.t1 | AT1G17370 | 27.076 | 277 | 163 | 7 | 22 | 268 | 52 | 319 | 1.04e-21 | 98.6 |
| MS.gene38698.t1 | AT1G17370 | 28.058 | 278 | 168 | 8 | 103 | 363 | 49 | 311 | 3.05e-18 | 87.8 |
| MS.gene38698.t1 | AT1G17370 | 27.624 | 181 | 112 | 4 | 204 | 383 | 55 | 217 | 9.02e-13 | 70.9 |
| MS.gene38698.t1 | AT1G17370 | 26.786 | 280 | 163 | 7 | 22 | 268 | 52 | 322 | 2.25e-21 | 97.4 |
| MS.gene38698.t1 | AT1G17370 | 28.114 | 281 | 167 | 9 | 103 | 363 | 49 | 314 | 9.62e-19 | 89.4 |
| MS.gene38698.t1 | AT1G17370 | 27.624 | 181 | 112 | 4 | 204 | 383 | 55 | 217 | 9.99e-13 | 70.9 |
| MS.gene38698.t1 | AT1G49600 | 26.296 | 270 | 165 | 7 | 25 | 265 | 120 | 384 | 2.93e-21 | 97.4 |
| MS.gene38698.t1 | AT1G49600 | 26.007 | 273 | 183 | 6 | 114 | 372 | 121 | 388 | 3.01e-20 | 94.4 |
| MS.gene38698.t1 | AT1G49600 | 26.296 | 270 | 165 | 7 | 25 | 265 | 120 | 384 | 3.19e-21 | 97.4 |
| MS.gene38698.t1 | AT1G49600 | 24.749 | 299 | 203 | 7 | 114 | 398 | 121 | 411 | 3.99e-20 | 94.0 |
| MS.gene38698.t1 | AT1G49600 | 26.296 | 270 | 165 | 7 | 25 | 265 | 120 | 384 | 3.19e-21 | 97.4 |
| MS.gene38698.t1 | AT1G49600 | 24.749 | 299 | 203 | 7 | 114 | 398 | 121 | 411 | 3.99e-20 | 94.0 |
| MS.gene38698.t1 | AT5G19350 | 24.908 | 273 | 168 | 8 | 25 | 266 | 25 | 291 | 7.11e-21 | 95.9 |
| MS.gene38698.t1 | AT5G19350 | 23.050 | 282 | 197 | 6 | 113 | 379 | 25 | 301 | 7.81e-16 | 80.5 |
| MS.gene38698.t1 | AT5G19350 | 24.651 | 215 | 123 | 5 | 18 | 203 | 114 | 318 | 6.94e-14 | 74.7 |
| MS.gene38698.t1 | AT5G19350 | 26.540 | 211 | 138 | 6 | 201 | 408 | 22 | 218 | 3.83e-13 | 72.4 |
| MS.gene38698.t1 | AT5G19350 | 24.188 | 277 | 169 | 8 | 25 | 266 | 25 | 295 | 2.96e-20 | 94.4 |
| MS.gene38698.t1 | AT5G19350 | 23.741 | 278 | 188 | 5 | 113 | 371 | 25 | 297 | 1.17e-15 | 80.1 |
| MS.gene38698.t1 | AT5G19350 | 26.699 | 206 | 136 | 5 | 201 | 403 | 22 | 215 | 2.78e-14 | 75.9 |
| MS.gene38698.t1 | AT5G19350 | 25.114 | 219 | 121 | 6 | 18 | 203 | 114 | 322 | 2.08e-13 | 73.2 |
| MS.gene38698.t1 | AT5G41690 | 20.993 | 443 | 258 | 11 | 25 | 378 | 69 | 508 | 1.01e-19 | 93.6 |
| MS.gene38698.t1 | AT5G41690 | 21.148 | 331 | 212 | 4 | 98 | 382 | 57 | 384 | 3.76e-13 | 72.8 |
| MS.gene38698.t1 | AT5G41690 | 20.993 | 443 | 258 | 11 | 25 | 378 | 69 | 508 | 1.01e-19 | 93.6 |
| MS.gene38698.t1 | AT5G41690 | 21.148 | 331 | 212 | 4 | 98 | 382 | 57 | 384 | 3.76e-13 | 72.8 |
| MS.gene38698.t1 | AT5G41690 | 20.993 | 443 | 258 | 11 | 25 | 378 | 69 | 508 | 1.01e-19 | 93.6 |
| MS.gene38698.t1 | AT5G41690 | 21.148 | 331 | 212 | 4 | 98 | 382 | 57 | 384 | 3.76e-13 | 72.8 |
| MS.gene38698.t1 | AT1G45100 | 22.680 | 388 | 252 | 11 | 22 | 370 | 62 | 440 | 4.06e-18 | 88.2 |
| MS.gene38698.t1 | AT3G52150 | 32.961 | 179 | 115 | 4 | 205 | 381 | 78 | 253 | 1.81e-17 | 83.2 |
| MS.gene38698.t1 | AT3G52150 | 30.159 | 189 | 115 | 6 | 103 | 278 | 69 | 253 | 1.63e-15 | 77.4 |
| MS.gene38698.t1 | AT3G52150 | 32.961 | 179 | 115 | 4 | 205 | 381 | 78 | 253 | 1.81e-17 | 83.2 |
| MS.gene38698.t1 | AT3G52150 | 30.159 | 189 | 115 | 6 | 103 | 278 | 69 | 253 | 1.63e-15 | 77.4 |
| MS.gene38698.t1 | AT4G00830 | 24.713 | 348 | 228 | 9 | 111 | 453 | 115 | 433 | 1.99e-16 | 82.8 |
| MS.gene38698.t1 | AT4G00830 | 26.749 | 243 | 156 | 6 | 24 | 261 | 116 | 341 | 5.77e-15 | 78.2 |
| MS.gene38698.t1 | AT4G00830 | 24.713 | 348 | 228 | 9 | 111 | 453 | 115 | 433 | 1.99e-16 | 82.8 |
| MS.gene38698.t1 | AT4G00830 | 26.749 | 243 | 156 | 6 | 24 | 261 | 116 | 341 | 5.77e-15 | 78.2 |
| MS.gene38698.t1 | AT4G00830 | 24.501 | 351 | 233 | 10 | 111 | 453 | 115 | 441 | 2.36e-16 | 82.8 |
| MS.gene38698.t1 | AT4G00830 | 26.230 | 244 | 164 | 6 | 24 | 261 | 116 | 349 | 7.26e-16 | 81.3 |
| MS.gene38698.t1 | AT4G00830 | 24.501 | 351 | 233 | 10 | 111 | 453 | 115 | 441 | 2.36e-16 | 82.8 |
| MS.gene38698.t1 | AT4G00830 | 26.230 | 244 | 164 | 6 | 24 | 261 | 116 | 349 | 7.26e-16 | 81.3 |
| MS.gene38698.t1 | AT4G00830 | 24.501 | 351 | 233 | 10 | 111 | 453 | 115 | 441 | 2.36e-16 | 82.8 |
| MS.gene38698.t1 | AT4G00830 | 26.230 | 244 | 164 | 6 | 24 | 261 | 116 | 349 | 7.26e-16 | 81.3 |
| MS.gene38698.t1 | AT3G52380 | 27.059 | 170 | 100 | 3 | 26 | 175 | 118 | 283 | 1.18e-15 | 79.0 |
| MS.gene38698.t1 | AT3G52380 | 29.032 | 186 | 125 | 5 | 205 | 386 | 118 | 300 | 1.12e-13 | 73.2 |
| MS.gene38698.t1 | AT3G52380 | 27.222 | 180 | 112 | 5 | 114 | 280 | 118 | 291 | 4.55e-11 | 65.1 |
| MS.gene38698.t1 | AT3G19350 | 48.611 | 72 | 37 | 0 | 532 | 603 | 23 | 94 | 1.57e-15 | 73.2 |
| MS.gene38698.t1 | AT5G50250 | 29.545 | 176 | 115 | 3 | 26 | 193 | 115 | 289 | 1.73e-15 | 77.8 |
| MS.gene38698.t1 | AT5G50250 | 30.319 | 188 | 113 | 5 | 205 | 387 | 115 | 289 | 8.96e-14 | 72.8 |
| MS.gene38698.t1 | AT2G15500 | 31.361 | 169 | 51 | 3 | 259 | 427 | 29 | 132 | 2.09e-15 | 73.6 |
| MS.gene38698.t1 | AT2G35410 | 30.168 | 179 | 113 | 4 | 205 | 378 | 97 | 268 | 2.62e-15 | 77.8 |
| MS.gene38698.t1 | AT2G37220 | 28.191 | 188 | 112 | 3 | 114 | 278 | 93 | 280 | 2.66e-15 | 77.4 |
| MS.gene38698.t1 | AT2G37220 | 25.714 | 210 | 128 | 3 | 11 | 193 | 78 | 286 | 5.54e-14 | 73.6 |
| MS.gene38698.t1 | AT4G00830 | 24.217 | 351 | 234 | 10 | 111 | 453 | 115 | 441 | 2.78e-15 | 79.3 |
| MS.gene38698.t1 | AT4G00830 | 25.506 | 247 | 162 | 7 | 24 | 261 | 116 | 349 | 7.69e-14 | 74.7 |
| MS.gene38698.t1 | AT3G52660 | 24.291 | 247 | 167 | 5 | 24 | 261 | 92 | 327 | 3.24e-14 | 75.9 |
| MS.gene38698.t1 | AT3G52660 | 24.291 | 247 | 167 | 5 | 24 | 261 | 92 | 327 | 3.24e-14 | 75.9 |
| MS.gene38698.t1 | AT3G52660 | 24.291 | 247 | 167 | 5 | 24 | 261 | 92 | 327 | 3.24e-14 | 75.9 |
| MS.gene38698.t1 | AT1G47490 | 29.240 | 171 | 111 | 6 | 25 | 185 | 102 | 272 | 3.33e-14 | 74.3 |
| MS.gene38698.t1 | AT1G47490 | 27.397 | 219 | 139 | 8 | 186 | 395 | 81 | 288 | 1.24e-12 | 69.7 |
| MS.gene38698.t1 | AT4G16280 | 26.087 | 161 | 116 | 1 | 17 | 174 | 113 | 273 | 5.21e-14 | 75.5 |
| MS.gene38698.t1 | AT2G44710 | 21.569 | 255 | 183 | 6 | 26 | 272 | 131 | 376 | 5.86e-14 | 75.9 |
| MS.gene38698.t1 | AT2G44710 | 21.569 | 255 | 183 | 6 | 26 | 272 | 216 | 461 | 6.08e-14 | 75.9 |
| MS.gene38698.t1 | AT2G44710 | 21.569 | 255 | 183 | 6 | 26 | 272 | 216 | 461 | 6.08e-14 | 75.9 |
| MS.gene38698.t1 | AT4G16280 | 26.087 | 161 | 116 | 1 | 17 | 174 | 38 | 198 | 8.40e-14 | 75.1 |
| MS.gene38698.t1 | AT4G16280 | 26.087 | 161 | 116 | 1 | 17 | 174 | 113 | 273 | 1.01e-13 | 75.1 |
| MS.gene38698.t1 | AT2G16940 | 30.573 | 157 | 91 | 3 | 36 | 176 | 194 | 348 | 1.09e-13 | 74.7 |
| MS.gene38698.t1 | AT2G16940 | 30.573 | 157 | 91 | 3 | 36 | 176 | 53 | 207 | 1.46e-13 | 73.6 |
| MS.gene38698.t1 | AT2G16940 | 30.573 | 157 | 91 | 3 | 36 | 176 | 53 | 207 | 1.46e-13 | 73.6 |
| MS.gene38698.t1 | AT4G24770 | 29.412 | 187 | 118 | 4 | 205 | 388 | 152 | 327 | 1.49e-13 | 72.8 |
| MS.gene38698.t1 | AT4G24770 | 27.528 | 178 | 120 | 3 | 15 | 184 | 141 | 317 | 1.63e-13 | 72.4 |
| MS.gene38698.t1 | AT4G24770 | 29.412 | 187 | 118 | 4 | 205 | 388 | 152 | 327 | 1.49e-13 | 72.8 |
| MS.gene38698.t1 | AT4G24770 | 27.528 | 178 | 120 | 3 | 15 | 184 | 141 | 317 | 1.63e-13 | 72.4 |
| MS.gene38698.t1 | AT2G16940 | 30.573 | 157 | 91 | 3 | 36 | 176 | 243 | 397 | 1.87e-13 | 73.9 |
| MS.gene38698.t1 | AT1G47500 | 28.070 | 171 | 113 | 6 | 25 | 185 | 104 | 274 | 6.15e-13 | 70.5 |
| MS.gene38698.t1 | AT1G47500 | 26.866 | 201 | 132 | 6 | 186 | 381 | 86 | 276 | 7.27e-11 | 64.3 |
| MS.gene38698.t1 | AT1G01080 | 26.562 | 192 | 126 | 5 | 106 | 283 | 102 | 292 | 6.30e-13 | 70.5 |
| MS.gene38698.t1 | AT3G13224 | 25.595 | 168 | 103 | 4 | 205 | 367 | 21 | 171 | 1.88e-12 | 69.7 |
| MS.gene38698.t1 | AT1G01080 | 26.425 | 193 | 126 | 5 | 106 | 283 | 102 | 293 | 2.96e-12 | 68.2 |
| MS.gene38698.t1 | AT3G13224 | 25.595 | 168 | 103 | 4 | 205 | 367 | 12 | 162 | 3.23e-12 | 68.9 |
| MS.gene38698.t1 | AT5G40490 | 26.230 | 183 | 117 | 5 | 205 | 385 | 44 | 210 | 5.83e-12 | 68.6 |
| MS.gene38698.t1 | AT3G13224 | 25.595 | 168 | 103 | 4 | 205 | 367 | 21 | 171 | 1.63e-11 | 65.1 |
| MS.gene38698.t1 | AT2G16940 | 28.916 | 166 | 91 | 4 | 36 | 176 | 223 | 386 | 1.76e-11 | 67.8 |
| MS.gene38698.t1 | AT4G26650 | 26.087 | 184 | 111 | 9 | 205 | 371 | 17 | 192 | 2.28e-11 | 67.0 |
| MS.gene38698.t1 | AT4G26650 | 26.087 | 184 | 111 | 9 | 205 | 371 | 14 | 189 | 2.76e-11 | 66.6 |
| MS.gene38698.t1 | AT3G46020 | 31.313 | 99 | 67 | 1 | 302 | 399 | 3 | 101 | 2.95e-11 | 60.8 |
| MS.gene38698.t1 | AT2G47310 | 26.047 | 215 | 144 | 7 | 189 | 396 | 94 | 300 | 3.01e-11 | 66.6 |
| MS.gene38698.t1 | AT5G40490 | 27.273 | 165 | 102 | 5 | 223 | 385 | 45 | 193 | 5.34e-11 | 65.5 |
| MS.gene38698.t1 | AT5G03580 | 37.500 | 80 | 50 | 0 | 307 | 386 | 18 | 97 | 5.80e-11 | 60.1 |
| MS.gene38698.t1 | AT5G47620 | 25.568 | 176 | 115 | 6 | 205 | 371 | 8 | 176 | 6.63e-11 | 65.5 |
| MS.gene38698.t1 | AT5G47620 | 25.568 | 176 | 115 | 6 | 205 | 371 | 8 | 176 | 6.63e-11 | 65.5 |
| MS.gene38698.t1 | AT5G47620 | 25.568 | 176 | 115 | 6 | 205 | 371 | 8 | 176 | 6.63e-11 | 65.5 |
| MS.gene38698.t1 | AT1G60000 | 23.196 | 194 | 141 | 4 | 5 | 191 | 65 | 257 | 6.74e-11 | 63.5 |
| MS.gene38698.t1 | AT4G14300 | 25.405 | 185 | 131 | 5 | 205 | 385 | 8 | 189 | 7.49e-11 | 65.1 |
| MS.gene38698.t1 | AT4G14300 | 25.405 | 185 | 131 | 5 | 205 | 385 | 8 | 189 | 7.49e-11 | 65.1 |
| MS.gene38698.t1 | AT1G03457 | 39.759 | 83 | 46 | 2 | 111 | 192 | 224 | 303 | 7.75e-11 | 64.3 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCTTCATTCTCAAAT+TGG | 0.190670 | 3.3:+84450435 | None:intergenic |
| TGTTGCTCCTGCTCAGAAAA+AGG | 0.264739 | 3.3:-84449604 | MS.gene38698:CDS |
| CTTACAGTCCTCTGCTGTTC+AGG | 0.285841 | 3.3:+84444890 | None:intergenic |
| GCTGGAGCTGCAAAGGTTAC+TGG | 0.301054 | 3.3:-84444717 | MS.gene38698:CDS |
| GGAACACCAGCAGGGTAAAA+TGG | 0.312505 | 3.3:+84445641 | None:intergenic |
| GATGGTAAATCAAAATGTTT+TGG | 0.314489 | 3.3:-84450191 | MS.gene38698:CDS |
| TAATATATGCAGGCTGGATT+TGG | 0.320619 | 3.3:-84445293 | MS.gene38698:intron |
| AAAGGTTACTGGGATGCTTT+TGG | 0.320904 | 3.3:-84444706 | MS.gene38698:CDS |
| AGCGAACTGTTCTCCGAGTT+TGG | 0.328906 | 3.3:-84449939 | MS.gene38698:CDS |
| TGTTCGGATCTGTAGGGATT+TGG | 0.334733 | 3.3:-84451275 | MS.gene38698:CDS |
| TATCTCTATCCTGCTTCCTT+TGG | 0.344410 | 3.3:+84450345 | None:intergenic |
| AGAGAGAAAAGCAAGGTTAC+AGG | 0.348997 | 3.3:-84449580 | MS.gene38698:intron |
| CTTCATGCCCATGGTTCAGC+AGG | 0.350116 | 3.3:-84445213 | MS.gene38698:CDS |
| CCTGCTCCCCGCCGTCCGCC+TGG | 0.361646 | 3.3:+84445173 | None:intergenic |
| CAATGACGTGGCGGCGGCTC+CGG | 0.362430 | 3.3:-84451404 | MS.gene38698:CDS |
| TACCCGCAGCAACTGGTTCC+TGG | 0.366368 | 3.3:-84445269 | MS.gene38698:CDS |
| TCTCAACAATCCCTAGGTTA+TGG | 0.366487 | 3.3:-84451250 | MS.gene38698:CDS |
| ACCATGGGCATGAAGAAGTT+TGG | 0.373711 | 3.3:+84445221 | None:intergenic |
| CCCTGCTGGTGTTCCTGGGA+TGG | 0.390484 | 3.3:-84445633 | MS.gene38698:CDS |
| GCACCACCTGGTCTCATTCC+AGG | 0.392663 | 3.3:+84445251 | None:intergenic |
| CGTGTCTATCGATATCCTTC+TGG | 0.397105 | 3.3:-84444998 | MS.gene38698:CDS |
| TCAGCGTCCAGGCGGACGGC+GGG | 0.403476 | 3.3:-84445180 | MS.gene38698:CDS |
| CCAGGCGGACGGCGGGGAGC+AGG | 0.404491 | 3.3:-84445173 | MS.gene38698:CDS |
| CAGACCTGTTGCTGCATCAT+TGG | 0.409615 | 3.3:+84445122 | None:intergenic |
| CATCTGTAACCGACTCTGAT+AGG | 0.413909 | 3.3:+84450279 | None:intergenic |
| CAGGGAATTAGTAGGGGATC+TGG | 0.415025 | 3.3:-84449794 | MS.gene38698:CDS |
| TATGATCAATTGCCCTGTCC+AGG | 0.415385 | 3.3:+84450552 | None:intergenic |
| AATGGCATTCGAGGTGCAAT+AGG | 0.419626 | 3.3:+84445659 | None:intergenic |
| GCATGAAGAAGTTTGGCATT+GGG | 0.422495 | 3.3:+84445228 | None:intergenic |
| TGCTGAGATGAATGGCAAAA+TGG | 0.424613 | 3.3:-84449646 | MS.gene38698:CDS |
| TGTAATTACCTGAGATATGA+AGG | 0.427155 | 3.3:+84445577 | None:intergenic |
| GGCATGAAGAAGTTTGGCAT+TGG | 0.443157 | 3.3:+84445227 | None:intergenic |
| TTGTTTCTGTTCGGATCTGT+AGG | 0.445634 | 3.3:-84451282 | MS.gene38698:CDS |
| TGTTGGCCCTGCTGAACCAT+GGG | 0.446639 | 3.3:+84445206 | None:intergenic |
| TCGGTCAAGTTGTTTCTGTT+CGG | 0.446639 | 3.3:-84451291 | MS.gene38698:CDS |
| GGCTGTAGCCAGAGCCTGCA+TGG | 0.447002 | 3.3:+84444928 | None:intergenic |
| CGCCTGGACGCTGACCTTGT+TGG | 0.449222 | 3.3:+84445189 | None:intergenic |
| CCATTGCTATCTTGCAAGAA+AGG | 0.449772 | 3.3:+84450492 | None:intergenic |
| TCCTCCAGCCTTCATATCTC+AGG | 0.450243 | 3.3:-84445585 | MS.gene38698:intron |
| TTTACCCTGCTGGTGTTCCT+GGG | 0.450834 | 3.3:-84445637 | MS.gene38698:CDS |
| TGCTTCCTCGGGAGTTGAAA+AGG | 0.450958 | 3.3:+84449763 | None:intergenic |
| GCAATAGGAGCCATTGTAAC+CGG | 0.453114 | 3.3:+84445674 | None:intergenic |
| ATTGCCAATGATGCAGCAAC+AGG | 0.453322 | 3.3:-84445126 | MS.gene38698:intron |
| ATTTGGTTACCCGCAGCAAC+TGG | 0.454612 | 3.3:-84445276 | MS.gene38698:CDS |
| GAGATCCACAGGGAATTAGT+AGG | 0.456137 | 3.3:-84449802 | MS.gene38698:CDS |
| GACGTCGTTGTCAGATGATT+CGG | 0.464012 | 3.3:+84451379 | None:intergenic |
| CCCATCCCAGGAACACCAGC+AGG | 0.464637 | 3.3:+84445632 | None:intergenic |
| GACTAAAGTTGCTGAGGCCG+TGG | 0.464712 | 3.3:-84444631 | MS.gene38698:CDS |
| TGATGATGCAGAACCTGGAC+AGG | 0.468640 | 3.3:-84450565 | MS.gene38698:intron |
| CTGGCATTGGAATACCTTGT+GGG | 0.469791 | 3.3:+84444969 | None:intergenic |
| GAATCGGTTTGTTGTTCAGT+GGG | 0.469931 | 3.3:+84451042 | None:intergenic |
| ACTTTAGTCTTGAGAGCCTC+TGG | 0.470970 | 3.3:+84444645 | None:intergenic |
| ACAGATTCTGCGAGATCCAC+AGG | 0.472786 | 3.3:-84449813 | MS.gene38698:intron |
| TTGTTGGCCCTGCTGAACCA+TGG | 0.474757 | 3.3:+84445205 | None:intergenic |
| ATTCCAATGCCAGGAGTAGC+TGG | 0.476577 | 3.3:-84444959 | MS.gene38698:CDS |
| TGGAACGCCCATGCAGGCTC+TGG | 0.477215 | 3.3:-84444936 | MS.gene38698:CDS |
| AGAGAAGCTAGTTGATCAGT+TGG | 0.477475 | 3.3:+84444570 | None:intergenic |
| TACAGCACGAGTTGCTTCCT+CGG | 0.478169 | 3.3:+84449751 | None:intergenic |
| CAGAAACAACTTGACCGATC+TGG | 0.481273 | 3.3:+84451296 | None:intergenic |
| GCACCACTCTTCCGAACACT+AGG | 0.481441 | 3.3:+84450996 | None:intergenic |
| CCTGCTGGTGTTCCTGGGAT+GGG | 0.484295 | 3.3:-84445632 | MS.gene38698:CDS |
| TATCGATAGACACGTCCTCT+TGG | 0.487327 | 3.3:+84445007 | None:intergenic |
| GGCGTTCCACCAGCTACTCC+TGG | 0.488926 | 3.3:+84444950 | None:intergenic |
| CACTGAACAACAAACCGATT+CGG | 0.490085 | 3.3:-84451040 | MS.gene38698:CDS |
| TTTGGCATTGGGGCACCACC+TGG | 0.493082 | 3.3:+84445239 | None:intergenic |
| ATGAATGGCAAAATGGTTGC+GGG | 0.498816 | 3.3:-84449639 | MS.gene38698:CDS |
| CTGGAGCTGCAAAGGTTACT+GGG | 0.499264 | 3.3:-84444716 | MS.gene38698:CDS |
| GGCCAACAAGGTCAGCGTCC+AGG | 0.502732 | 3.3:-84445191 | MS.gene38698:CDS |
| CGAATCGGTTTGTTGTTCAG+TGG | 0.502963 | 3.3:+84451041 | None:intergenic |
| CTTTCCATTGAGTGCCTCCA+CGG | 0.505448 | 3.3:+84450130 | None:intergenic |
| AGTGCAATTGACAAGTTAAA+CGG | 0.509973 | 3.3:-84450407 | MS.gene38698:CDS |
| GATGCTTCTGGTCTGTCTAA+AGG | 0.510690 | 3.3:-84450470 | MS.gene38698:CDS |
| CATGCTGCTCAACGATAAAC+CGG | 0.510980 | 3.3:-84450384 | MS.gene38698:CDS |
| GAGAAGCTAGTTGATCAGTT+GGG | 0.512991 | 3.3:+84444571 | None:intergenic |
| TGAGCAGGAGCAACATAAAG+AGG | 0.513452 | 3.3:+84449612 | None:intergenic |
| ATGGGACAACAAATTATGTA+TGG | 0.513951 | 3.3:-84445614 | MS.gene38698:CDS |
| TTGGCTTCTCAACAATCCCT+AGG | 0.514758 | 3.3:-84451256 | MS.gene38698:CDS |
| AGCTGGTGGAACGCCCATGC+AGG | 0.515799 | 3.3:-84444942 | MS.gene38698:CDS |
| AAGATAGCAATGGATGCTTC+TGG | 0.515938 | 3.3:-84450482 | MS.gene38698:CDS |
| AGATCCACAGGGAATTAGTA+GGG | 0.516201 | 3.3:-84449801 | MS.gene38698:CDS |
| TGGAAATGACCAACGTAGAC+CGG | 0.518569 | 3.3:+84450365 | None:intergenic |
| CATGAAGAAGTTTGGCATTG+GGG | 0.520879 | 3.3:+84445229 | None:intergenic |
| GCCAAACTTCTTCATGCCCA+TGG | 0.522742 | 3.3:-84445222 | MS.gene38698:CDS |
| ATATGAAGGCTGGAGGAGCT+TGG | 0.523155 | 3.3:+84445591 | None:intergenic |
| TCGTAGCTTGCTGAGATGAA+TGG | 0.525753 | 3.3:-84449654 | MS.gene38698:intron |
| GTTGTCAGATGATTCGGAAC+CGG | 0.525867 | 3.3:+84451385 | None:intergenic |
| CTCATCGCGACCCTAGTGTT+CGG | 0.527657 | 3.3:-84451007 | MS.gene38698:CDS |
| GTCAGCGTCCAGGCGGACGG+CGG | 0.528898 | 3.3:-84445181 | MS.gene38698:CDS |
| ATTACCTGAGATATGAAGGC+TGG | 0.529283 | 3.3:+84445581 | None:intergenic |
| TGGTCATTTCCAAAGGAAGC+AGG | 0.530354 | 3.3:-84450354 | MS.gene38698:CDS |
| TGTGAGCAATGACGTGGCGG+CGG | 0.531503 | 3.3:-84451410 | MS.gene38698:CDS |
| TCAATCAGATGCAACACCTC+AGG | 0.532271 | 3.3:+84444672 | None:intergenic |
| GTTCAGGAGGAGCATTTGCA+AGG | 0.532273 | 3.3:+84444906 | None:intergenic |
| TCTGGTCTGTCTAAAGGCTA+CGG | 0.533319 | 3.3:-84450464 | MS.gene38698:CDS |
| AAAGCCGTGGAGGCACTCAA+TGG | 0.533685 | 3.3:-84450134 | MS.gene38698:CDS |
| ACAGCACGAGTTGCTTCCTC+GGG | 0.536352 | 3.3:+84449752 | None:intergenic |
| TTCCAGGAACCAGTTGCTGC+GGG | 0.536366 | 3.3:+84445267 | None:intergenic |
| GATGACAAGGAGTGGTATGT+TGG | 0.537605 | 3.3:-84450101 | MS.gene38698:CDS |
| CCTGGCATTGGAATACCTTG+TGG | 0.539151 | 3.3:+84444968 | None:intergenic |
| GTAGAGAAGATTGAGCATGC+TGG | 0.539286 | 3.3:-84444735 | MS.gene38698:CDS |
| AAGACATGAGCAGAGTATGA+AGG | 0.540087 | 3.3:-84450036 | MS.gene38698:CDS |
| GCAGGGTAAAATGGCATTCG+AGG | 0.543332 | 3.3:+84445650 | None:intergenic |
| ATAATTTGTTGTCCCATCCC+AGG | 0.547832 | 3.3:+84445620 | None:intergenic |
| TGCTCAATCTTCTCTACTAG+AGG | 0.548946 | 3.3:+84444741 | None:intergenic |
| AAGGTCAGCGTCCAGGCGGA+CGG | 0.552143 | 3.3:-84445184 | MS.gene38698:CDS |
| AAGATCGTAAAGCTGTGAAT+CGG | 0.552323 | 3.3:+84451324 | None:intergenic |
| TGTTTCTGTTCGGATCTGTA+GGG | 0.553345 | 3.3:-84451281 | MS.gene38698:CDS |
| AATTGACATAACCATAACCT+AGG | 0.557075 | 3.3:+84451239 | None:intergenic |
| TGAGAATACATAATCCGAAT+CGG | 0.557323 | 3.3:+84451026 | None:intergenic |
| TGAGCATGCTGGAGCTGCAA+AGG | 0.560400 | 3.3:-84444724 | MS.gene38698:CDS |
| CCACAAGGTATTCCAATGCC+AGG | 0.564133 | 3.3:-84444968 | MS.gene38698:CDS |
| GCAAGTGAGGCCGGTTACAA+TGG | 0.565595 | 3.3:-84445684 | MS.gene38698:CDS |
| AAACTTGTATCTCAAGAACT+TGG | 0.566366 | 3.3:-84449988 | MS.gene38698:CDS |
| GACCCTAGTGTTCGGAAGAG+TGG | 0.566788 | 3.3:-84450999 | MS.gene38698:CDS |
| CCACCAGCTACTCCTGGCAT+TGG | 0.567837 | 3.3:+84444956 | None:intergenic |
| ATGGTTCAGCAGGGCCAACA+AGG | 0.568025 | 3.3:-84445203 | MS.gene38698:CDS |
| CCTTTCTTGCAAGATAGCAA+TGG | 0.569880 | 3.3:-84450492 | MS.gene38698:CDS |
| TGAATGGATTCATAGATGCT+TGG | 0.574263 | 3.3:-84444777 | MS.gene38698:intron |
| GATGAATGGCAAAATGGTTG+CGG | 0.576429 | 3.3:-84449640 | MS.gene38698:CDS |
| GCTGTAGCCAGAGCCTGCAT+GGG | 0.576435 | 3.3:+84444929 | None:intergenic |
| CTGGTTCCTGGAATGAGACC+AGG | 0.580099 | 3.3:-84445257 | MS.gene38698:CDS |
| TGAAGTTACTGTACCAAACT+CGG | 0.583558 | 3.3:+84449926 | None:intergenic |
| TGCATCATTGGCAATGAATG+TGG | 0.584482 | 3.3:+84445134 | None:intergenic |
| TCAGATGCAACACCTCAGGC+TGG | 0.586095 | 3.3:+84444676 | None:intergenic |
| TTCATGCCCATGGTTCAGCA+GGG | 0.589406 | 3.3:-84445212 | MS.gene38698:CDS |
| AGAAATTTGATGACAAGGAG+TGG | 0.592245 | 3.3:-84450109 | MS.gene38698:CDS |
| TCTACGTTGGTCATTTCCAA+AGG | 0.593767 | 3.3:-84450361 | MS.gene38698:CDS |
| CCTTCTGGTCGCAACCCACA+AGG | 0.595900 | 3.3:-84444983 | MS.gene38698:CDS |
| CAGCGTCCAGGCGGACGGCG+GGG | 0.601413 | 3.3:-84445179 | MS.gene38698:CDS |
| ACAGTCCTCTGCTGTTCAGG+AGG | 0.601576 | 3.3:+84444893 | None:intergenic |
| TGGTACAGTAACTTCATGCA+AGG | 0.601719 | 3.3:-84449919 | MS.gene38698:intron |
| CCTTGTGGGTTGCGACCAGA+AGG | 0.601909 | 3.3:+84444983 | None:intergenic |
| TTCAGGAGGAGCATTTGCAA+GGG | 0.607198 | 3.3:+84444907 | None:intergenic |
| TGGAAAGAAATTTGATGACA+AGG | 0.609034 | 3.3:-84450114 | MS.gene38698:CDS |
| ATTCCAGGAACCAGTTGCTG+CGG | 0.615044 | 3.3:+84445266 | None:intergenic |
| GTAGTAATGAGAGATGTAGA+TGG | 0.616292 | 3.3:-84450209 | MS.gene38698:CDS |
| AACGATAAACCGGTCTACGT+TGG | 0.616304 | 3.3:-84450374 | MS.gene38698:CDS |
| TTTGGAGATGGACCAGCCTG+AGG | 0.621857 | 3.3:-84444688 | MS.gene38698:CDS |
| ATGCTCCTCCTGAACAGCAG+AGG | 0.623330 | 3.3:-84444898 | MS.gene38698:CDS |
| GCTCAATCTTCTCTACTAGA+GGG | 0.623607 | 3.3:+84444742 | None:intergenic |
| TGCTGCTGCTAAAGCCGTGG+AGG | 0.626357 | 3.3:-84450144 | MS.gene38698:CDS |
| ATTGACATAACCATAACCTA+GGG | 0.628812 | 3.3:+84451240 | None:intergenic |
| AACATTTCTCAACACATCCA+CGG | 0.633247 | 3.3:+84444614 | None:intergenic |
| CCAATGCCAGGAGTAGCTGG+TGG | 0.636248 | 3.3:-84444956 | MS.gene38698:CDS |
| ACCTGAGATATGAAGGCTGG+AGG | 0.642986 | 3.3:+84445584 | None:intergenic |
| TCTCAAGACTAAAGTTGCTG+AGG | 0.646425 | 3.3:-84444637 | MS.gene38698:CDS |
| AATTTCAGTAACCCTCATGA+CGG | 0.648870 | 3.3:-84451220 | MS.gene38698:intron |
| AATCGGTTTGTTGTTCAGTG+GGG | 0.658473 | 3.3:+84451043 | None:intergenic |
| CGAGAATGTGAGCAATGACG+TGG | 0.659369 | 3.3:-84451416 | MS.gene38698:CDS |
| CACCACTCTTCCGAACACTA+GGG | 0.663524 | 3.3:+84450997 | None:intergenic |
| GATCCACAGGGAATTAGTAG+GGG | 0.663558 | 3.3:-84449800 | MS.gene38698:CDS |
| GCATCATTGGCAATGAATGT+GGG | 0.664288 | 3.3:+84445135 | None:intergenic |
| CAGATTCTGCGAGATCCACA+GGG | 0.664919 | 3.3:-84449812 | MS.gene38698:CDS |
| AAAAGGAAGAGAGAAAAGCA+AGG | 0.668923 | 3.3:-84449587 | MS.gene38698:CDS |
| GAATGTGGGAGTTGTTGCAT+AGG | 0.671262 | 3.3:+84445149 | None:intergenic |
| CCATCCCAGGAACACCAGCA+GGG | 0.678496 | 3.3:+84445633 | None:intergenic |
| AGATGCTGCTGCTAAAGCCG+TGG | 0.680131 | 3.3:-84450147 | MS.gene38698:CDS |
| CAACAAGGTCAGCGTCCAGG+CGG | 0.681067 | 3.3:-84445188 | MS.gene38698:CDS |
| GCATCTGATTGAGTCACCAG+AGG | 0.683305 | 3.3:-84444661 | MS.gene38698:CDS |
| GATGATGCAGAACCTGGACA+GGG | 0.684090 | 3.3:-84450564 | MS.gene38698:intron |
| GAATGTGAGCAATGACGTGG+CGG | 0.685042 | 3.3:-84451413 | MS.gene38698:CDS |
| ACAACGACGTCGTTGTACGT+CGG | 0.715761 | 3.3:-84451367 | MS.gene38698:CDS |
| GATCCCCTACTAATTCCCTG+TGG | 0.725738 | 3.3:+84449797 | None:intergenic |
| GTTCCTGGAATGAGACCAGG+TGG | 0.758688 | 3.3:-84445254 | MS.gene38698:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84444542 | 84451452 | 84444542 | ID=MS.gene38698 |
| chr3.3 | mRNA | 84444542 | 84451452 | 84444542 | ID=MS.gene38698.t1;Parent=MS.gene38698 |
| chr3.3 | exon | 84451221 | 84451452 | 84451221 | ID=MS.gene38698.t1.exon1;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84451221 | 84451452 | 84451221 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84450977 | 84451095 | 84450977 | ID=MS.gene38698.t1.exon2;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84450977 | 84451095 | 84450977 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84449920 | 84450576 | 84449920 | ID=MS.gene38698.t1.exon3;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84449920 | 84450576 | 84449920 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84449754 | 84449831 | 84449754 | ID=MS.gene38698.t1.exon4;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84449754 | 84449831 | 84449754 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84449581 | 84449670 | 84449581 | ID=MS.gene38698.t1.exon5;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84449581 | 84449670 | 84449581 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84445586 | 84445717 | 84445586 | ID=MS.gene38698.t1.exon6;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84445586 | 84445717 | 84445586 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84445127 | 84445303 | 84445127 | ID=MS.gene38698.t1.exon7;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84445127 | 84445303 | 84445127 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84444895 | 84445035 | 84444895 | ID=MS.gene38698.t1.exon8;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84444895 | 84445035 | 84444895 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| chr3.3 | exon | 84444542 | 84444784 | 84444542 | ID=MS.gene38698.t1.exon9;Parent=MS.gene38698.t1 |
| chr3.3 | CDS | 84444542 | 84444784 | 84444542 | ID=cds.MS.gene38698.t1;Parent=MS.gene38698.t1 |
| Gene Sequence |
| Protein sequence |
