Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38815.t1 | XP_003625060.1 | 97.2 | 320 | 9 | 0 | 1 | 320 | 1 | 320 | 1.30E-183 | 652.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38815.t1 | Q9ZTA3 | 41.5 | 318 | 170 | 7 | 5 | 313 | 9 | 319 | 1.2e-60 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38815.t1 | Q2HRI0 | 97.2 | 320 | 9 | 0 | 1 | 320 | 1 | 320 | 9.5e-184 | 652.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04927 | MS.gene38815 | 0.811547 | 6.63E-51 | -1.69E-46 |
| MS.gene054421 | MS.gene38815 | 0.813218 | 2.86E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene38815 | 0.808972 | 2.38E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene38815 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene060087 | MS.gene38815 | 0.831695 | 1.44E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38815.t1 | MTR_7g090520 | 97.188 | 320 | 9 | 0 | 1 | 320 | 1 | 320 | 0.0 | 655 |
| MS.gene38815.t1 | MTR_4g011720 | 39.937 | 318 | 185 | 5 | 1 | 316 | 1 | 314 | 1.57e-82 | 252 |
| MS.gene38815.t1 | MTR_4g011690 | 38.558 | 319 | 189 | 6 | 1 | 316 | 1 | 315 | 9.72e-82 | 250 |
| MS.gene38815.t1 | MTR_4g011720 | 38.136 | 236 | 143 | 3 | 1 | 236 | 1 | 233 | 4.98e-55 | 180 |
| MS.gene38815.t1 | MTR_1g011600 | 32.770 | 296 | 185 | 8 | 1 | 285 | 1 | 293 | 6.26e-50 | 168 |
| MS.gene38815.t1 | MTR_4g021360 | 31.596 | 307 | 197 | 8 | 10 | 305 | 7 | 311 | 7.17e-48 | 163 |
| MS.gene38815.t1 | MTR_4g021380 | 31.230 | 317 | 203 | 10 | 10 | 316 | 7 | 318 | 2.53e-46 | 159 |
| MS.gene38815.t1 | MTR_3g108520 | 28.972 | 321 | 219 | 7 | 1 | 316 | 1 | 317 | 2.74e-46 | 159 |
| MS.gene38815.t1 | MTR_7g077670 | 27.551 | 294 | 198 | 7 | 10 | 297 | 11 | 295 | 1.20e-28 | 112 |
| MS.gene38815.t1 | MTR_8g030880 | 26.667 | 300 | 194 | 9 | 10 | 297 | 10 | 295 | 1.78e-27 | 109 |
| MS.gene38815.t1 | MTR_7g062570 | 29.841 | 315 | 186 | 13 | 6 | 304 | 51 | 346 | 3.33e-27 | 109 |
| MS.gene38815.t1 | MTR_1g102070 | 28.620 | 297 | 197 | 9 | 28 | 313 | 76 | 368 | 1.69e-24 | 102 |
| MS.gene38815.t1 | MTR_6g035160 | 35.795 | 176 | 102 | 8 | 147 | 316 | 8 | 178 | 2.98e-24 | 97.4 |
| MS.gene38815.t1 | MTR_2g072910 | 32.414 | 290 | 170 | 11 | 10 | 286 | 51 | 327 | 4.99e-24 | 100 |
| MS.gene38815.t1 | MTR_1g034140 | 25.574 | 305 | 199 | 7 | 10 | 298 | 27 | 319 | 1.15e-23 | 99.8 |
| MS.gene38815.t1 | MTR_6g015950 | 29.167 | 288 | 185 | 9 | 7 | 286 | 36 | 312 | 6.04e-23 | 97.8 |
| MS.gene38815.t1 | MTR_5g055690 | 29.258 | 229 | 156 | 4 | 39 | 263 | 71 | 297 | 1.64e-22 | 96.7 |
| MS.gene38815.t1 | MTR_2g437380 | 27.723 | 303 | 205 | 10 | 10 | 304 | 50 | 346 | 3.32e-22 | 95.9 |
| MS.gene38815.t1 | MTR_2g072890 | 28.571 | 301 | 197 | 10 | 10 | 301 | 52 | 343 | 3.50e-22 | 95.9 |
| MS.gene38815.t1 | MTR_3g096500 | 26.984 | 315 | 187 | 13 | 11 | 300 | 67 | 363 | 1.02e-21 | 94.7 |
| MS.gene38815.t1 | MTR_7g062580 | 29.712 | 313 | 189 | 14 | 6 | 304 | 51 | 346 | 1.68e-21 | 94.0 |
| MS.gene38815.t1 | MTR_0328s0030 | 30.182 | 275 | 176 | 10 | 39 | 304 | 69 | 336 | 1.94e-21 | 93.6 |
| MS.gene38815.t1 | MTR_5g025090 | 24.375 | 320 | 196 | 8 | 6 | 307 | 1 | 292 | 2.04e-21 | 92.8 |
| MS.gene38815.t1 | MTR_5g048570 | 27.243 | 301 | 204 | 8 | 10 | 304 | 45 | 336 | 2.08e-21 | 93.6 |
| MS.gene38815.t1 | MTR_5g055680 | 28.710 | 310 | 192 | 12 | 8 | 304 | 45 | 338 | 4.50e-21 | 92.8 |
| MS.gene38815.t1 | MTR_2g102570 | 26.027 | 292 | 194 | 8 | 5 | 286 | 47 | 326 | 4.87e-21 | 92.8 |
| MS.gene38815.t1 | MTR_8g033380 | 26.950 | 282 | 193 | 7 | 29 | 300 | 72 | 350 | 6.40e-21 | 92.4 |
| MS.gene38815.t1 | MTR_1g011580 | 26.070 | 257 | 175 | 5 | 10 | 263 | 63 | 307 | 1.42e-20 | 91.3 |
| MS.gene38815.t1 | MTR_0009s0050 | 27.419 | 310 | 196 | 12 | 8 | 304 | 45 | 338 | 2.46e-20 | 90.5 |
| MS.gene38815.t1 | MTR_0009s0050 | 27.419 | 310 | 196 | 12 | 8 | 304 | 45 | 338 | 2.84e-20 | 90.5 |
| MS.gene38815.t1 | MTR_5g024940 | 26.394 | 269 | 170 | 6 | 31 | 296 | 20 | 263 | 3.31e-20 | 89.4 |
| MS.gene38815.t1 | MTR_5g048470 | 28.571 | 266 | 169 | 7 | 10 | 266 | 53 | 306 | 4.92e-20 | 89.7 |
| MS.gene38815.t1 | MTR_6g464620 | 27.723 | 303 | 202 | 11 | 10 | 300 | 64 | 361 | 7.50e-20 | 89.4 |
| MS.gene38815.t1 | MTR_5g027230 | 25.704 | 284 | 172 | 7 | 31 | 296 | 20 | 282 | 7.72e-20 | 88.6 |
| MS.gene38815.t1 | MTR_7g016090 | 29.658 | 263 | 165 | 9 | 8 | 263 | 39 | 288 | 8.20e-20 | 89.0 |
| MS.gene38815.t1 | MTR_7g016090 | 29.658 | 263 | 165 | 9 | 8 | 263 | 37 | 286 | 8.26e-20 | 89.0 |
| MS.gene38815.t1 | MTR_4g087090 | 25.597 | 293 | 204 | 7 | 6 | 285 | 26 | 317 | 1.18e-19 | 88.6 |
| MS.gene38815.t1 | MTR_5g048550 | 26.144 | 306 | 201 | 9 | 10 | 304 | 47 | 338 | 1.42e-19 | 88.6 |
| MS.gene38815.t1 | MTR_8g074050 | 26.974 | 304 | 202 | 11 | 10 | 302 | 52 | 346 | 1.48e-19 | 88.2 |
| MS.gene38815.t1 | MTR_4g116010 | 27.660 | 282 | 185 | 8 | 34 | 303 | 67 | 341 | 1.57e-19 | 88.2 |
| MS.gene38815.t1 | MTR_8g093930 | 25.455 | 330 | 207 | 14 | 10 | 317 | 47 | 359 | 1.59e-19 | 88.6 |
| MS.gene38815.t1 | MTR_2g437380 | 29.032 | 248 | 163 | 9 | 65 | 304 | 10 | 252 | 1.81e-19 | 86.7 |
| MS.gene38815.t1 | MTR_7g062600 | 28.873 | 284 | 179 | 12 | 34 | 304 | 70 | 343 | 2.20e-19 | 87.8 |
| MS.gene38815.t1 | MTR_7g068650 | 27.083 | 288 | 192 | 10 | 34 | 311 | 77 | 356 | 2.28e-19 | 87.8 |
| MS.gene38815.t1 | MTR_4g015790 | 27.063 | 303 | 196 | 11 | 10 | 296 | 62 | 355 | 2.31e-19 | 88.2 |
| MS.gene38815.t1 | MTR_3g117420 | 27.632 | 304 | 200 | 11 | 10 | 302 | 52 | 346 | 2.50e-19 | 87.8 |
| MS.gene38815.t1 | MTR_1g034060 | 28.723 | 188 | 126 | 4 | 118 | 302 | 151 | 333 | 3.44e-19 | 87.4 |
| MS.gene38815.t1 | MTR_5g055900 | 27.097 | 310 | 195 | 11 | 1 | 296 | 38 | 330 | 4.18e-19 | 87.0 |
| MS.gene38815.t1 | MTR_1g070085 | 30.000 | 190 | 127 | 6 | 115 | 301 | 63 | 249 | 5.26e-19 | 85.5 |
| MS.gene38815.t1 | MTR_1g070100 | 30.208 | 192 | 122 | 6 | 115 | 300 | 59 | 244 | 7.21e-19 | 85.1 |
| MS.gene38815.t1 | MTR_5g048740 | 26.198 | 313 | 211 | 10 | 1 | 304 | 36 | 337 | 8.33e-19 | 86.3 |
| MS.gene38815.t1 | MTR_0009s0480 | 26.871 | 294 | 161 | 13 | 39 | 304 | 70 | 337 | 1.01e-18 | 85.9 |
| MS.gene38815.t1 | MTR_7g081710 | 26.073 | 303 | 204 | 10 | 5 | 298 | 44 | 335 | 1.16e-18 | 85.9 |
| MS.gene38815.t1 | MTR_1g070085 | 30.000 | 190 | 127 | 6 | 115 | 301 | 141 | 327 | 1.29e-18 | 85.5 |
| MS.gene38815.t1 | MTR_1g070085 | 30.000 | 190 | 127 | 6 | 115 | 301 | 141 | 327 | 1.29e-18 | 85.5 |
| MS.gene38815.t1 | MTR_7g063730 | 25.600 | 250 | 172 | 8 | 63 | 304 | 112 | 355 | 1.72e-18 | 85.5 |
| MS.gene38815.t1 | MTR_1g070135 | 26.689 | 296 | 192 | 10 | 10 | 294 | 38 | 319 | 1.85e-18 | 85.1 |
| MS.gene38815.t1 | MTR_5g055820 | 27.338 | 278 | 174 | 12 | 40 | 301 | 72 | 337 | 1.89e-18 | 85.1 |
| MS.gene38815.t1 | MTR_5g032880 | 23.934 | 305 | 204 | 9 | 10 | 300 | 376 | 666 | 1.95e-18 | 86.3 |
| MS.gene38815.t1 | MTR_5g032880 | 25.246 | 305 | 178 | 11 | 5 | 286 | 33 | 310 | 1.70e-17 | 83.6 |
| MS.gene38815.t1 | MTR_3g070860 | 26.875 | 320 | 199 | 12 | 10 | 315 | 50 | 348 | 2.20e-18 | 85.1 |
| MS.gene38815.t1 | MTR_8g064200 | 27.835 | 291 | 181 | 10 | 10 | 286 | 57 | 332 | 2.88e-18 | 84.7 |
| MS.gene38815.t1 | MTR_8g064200 | 27.835 | 291 | 181 | 10 | 10 | 286 | 52 | 327 | 2.98e-18 | 84.7 |
| MS.gene38815.t1 | MTR_1g070120 | 26.059 | 307 | 186 | 12 | 7 | 294 | 35 | 319 | 3.47e-18 | 84.3 |
| MS.gene38815.t1 | MTR_0009s0050 | 37.302 | 126 | 75 | 3 | 181 | 304 | 35 | 158 | 3.67e-18 | 81.3 |
| MS.gene38815.t1 | MTR_4g087140 | 29.480 | 173 | 117 | 4 | 119 | 287 | 150 | 321 | 3.95e-18 | 84.3 |
| MS.gene38815.t1 | MTR_1g034120 | 27.128 | 188 | 129 | 4 | 118 | 302 | 151 | 333 | 4.19e-18 | 84.3 |
| MS.gene38815.t1 | MTR_5g055800 | 27.491 | 291 | 160 | 11 | 39 | 303 | 71 | 336 | 4.80e-18 | 84.0 |
| MS.gene38815.t1 | MTR_5g025050 | 24.919 | 309 | 186 | 8 | 6 | 296 | 1 | 281 | 5.00e-18 | 83.2 |
| MS.gene38815.t1 | MTR_3g088565 | 25.633 | 316 | 204 | 7 | 10 | 309 | 3 | 303 | 5.45e-18 | 83.2 |
| MS.gene38815.t1 | MTR_3g088745 | 26.645 | 304 | 200 | 12 | 11 | 299 | 37 | 332 | 6.64e-18 | 83.6 |
| MS.gene38815.t1 | MTR_5g032870 | 26.032 | 315 | 185 | 13 | 10 | 300 | 38 | 328 | 8.03e-18 | 83.2 |
| MS.gene38815.t1 | MTR_0009s0050 | 30.939 | 181 | 96 | 6 | 148 | 304 | 65 | 240 | 8.26e-18 | 82.0 |
| MS.gene38815.t1 | MTR_3g026150 | 29.960 | 247 | 160 | 10 | 63 | 301 | 5 | 246 | 8.99e-18 | 81.6 |
| MS.gene38815.t1 | MTR_0009s0050 | 30.939 | 181 | 96 | 6 | 148 | 304 | 65 | 240 | 1.06e-17 | 81.6 |
| MS.gene38815.t1 | MTR_8g024120 | 24.183 | 306 | 220 | 8 | 5 | 305 | 37 | 335 | 1.18e-17 | 82.8 |
| MS.gene38815.t1 | MTR_0009s0400 | 36.585 | 123 | 74 | 3 | 184 | 304 | 14 | 134 | 1.25e-17 | 79.0 |
| MS.gene38815.t1 | MTR_8g074070 | 27.213 | 305 | 200 | 11 | 10 | 302 | 52 | 346 | 1.76e-17 | 82.4 |
| MS.gene38815.t1 | MTR_7g029655 | 28.146 | 302 | 188 | 14 | 2 | 288 | 58 | 345 | 1.92e-17 | 82.4 |
| MS.gene38815.t1 | MTR_3g026150 | 28.000 | 300 | 197 | 12 | 12 | 301 | 59 | 349 | 2.03e-17 | 82.4 |
| MS.gene38815.t1 | MTR_4g087110 | 27.273 | 187 | 128 | 4 | 119 | 302 | 150 | 331 | 2.18e-17 | 82.0 |
| MS.gene38815.t1 | MTR_1g081840 | 25.902 | 305 | 201 | 10 | 11 | 299 | 54 | 349 | 2.76e-17 | 82.0 |
| MS.gene38815.t1 | MTR_4g074130 | 25.292 | 257 | 181 | 8 | 10 | 263 | 40 | 288 | 3.19e-17 | 81.6 |
| MS.gene38815.t1 | MTR_7g062550 | 27.707 | 314 | 194 | 13 | 6 | 304 | 56 | 351 | 3.66e-17 | 81.6 |
| MS.gene38815.t1 | MTR_4g123020 | 28.025 | 314 | 185 | 13 | 1 | 294 | 9 | 301 | 4.62e-17 | 80.9 |
| MS.gene38815.t1 | MTR_1g033810 | 29.592 | 294 | 173 | 12 | 10 | 286 | 47 | 323 | 4.64e-17 | 81.3 |
| MS.gene38815.t1 | MTR_4g087100 | 28.488 | 172 | 119 | 3 | 119 | 287 | 150 | 320 | 5.41e-17 | 80.9 |
| MS.gene38815.t1 | MTR_2g069210 | 25.466 | 322 | 216 | 12 | 3 | 313 | 57 | 365 | 1.57e-16 | 79.7 |
| MS.gene38815.t1 | MTR_7g045650 | 30.400 | 250 | 148 | 12 | 10 | 248 | 60 | 294 | 1.59e-16 | 79.3 |
| MS.gene38815.t1 | MTR_3g092890 | 27.413 | 259 | 172 | 6 | 10 | 263 | 38 | 285 | 1.62e-16 | 79.3 |
| MS.gene38815.t1 | MTR_7g016080 | 27.703 | 296 | 161 | 13 | 5 | 283 | 36 | 295 | 1.83e-16 | 79.3 |
| MS.gene38815.t1 | MTR_8g009090 | 26.756 | 299 | 188 | 12 | 6 | 288 | 56 | 339 | 2.90e-16 | 79.0 |
| MS.gene38815.t1 | MTR_5g011250 | 26.384 | 307 | 206 | 10 | 10 | 302 | 47 | 347 | 2.91e-16 | 79.0 |
| MS.gene38815.t1 | MTR_5g048850 | 26.909 | 275 | 181 | 8 | 41 | 304 | 73 | 338 | 3.06e-16 | 79.0 |
| MS.gene38815.t1 | MTR_8g009080 | 26.102 | 295 | 205 | 9 | 9 | 297 | 93 | 380 | 4.08e-16 | 79.0 |
| MS.gene38815.t1 | MTR_8g074070 | 27.632 | 304 | 181 | 12 | 10 | 302 | 52 | 327 | 5.14e-16 | 77.8 |
| MS.gene38815.t1 | MTR_8g009110 | 24.921 | 317 | 207 | 12 | 3 | 303 | 53 | 354 | 5.68e-16 | 78.2 |
| MS.gene38815.t1 | MTR_0056s0160 | 30.061 | 163 | 84 | 6 | 148 | 285 | 48 | 205 | 6.48e-16 | 76.3 |
| MS.gene38815.t1 | MTR_2g069090 | 26.403 | 303 | 190 | 11 | 3 | 288 | 61 | 347 | 8.42e-16 | 77.8 |
| MS.gene38815.t1 | MTR_7g102820 | 25.633 | 316 | 204 | 10 | 10 | 305 | 67 | 371 | 1.18e-15 | 77.4 |
| MS.gene38815.t1 | MTR_5g059130 | 25.559 | 313 | 202 | 13 | 2 | 297 | 33 | 331 | 1.27e-15 | 77.0 |
| MS.gene38815.t1 | MTR_3g058610 | 26.756 | 299 | 193 | 10 | 7 | 289 | 36 | 324 | 1.37e-15 | 77.0 |
| MS.gene38815.t1 | MTR_4g117880 | 26.246 | 301 | 184 | 12 | 8 | 288 | 58 | 340 | 2.69e-15 | 76.3 |
| MS.gene38815.t1 | MTR_3g091360 | 26.984 | 315 | 204 | 13 | 3 | 305 | 45 | 345 | 4.15e-15 | 75.5 |
| MS.gene38815.t1 | MTR_2g033270 | 25.243 | 309 | 183 | 12 | 1 | 287 | 10 | 292 | 4.34e-15 | 75.1 |
| MS.gene38815.t1 | MTR_3g043900 | 27.393 | 303 | 194 | 11 | 8 | 300 | 54 | 340 | 6.07e-15 | 75.1 |
| MS.gene38815.t1 | MTR_4g087120 | 25.081 | 307 | 207 | 10 | 10 | 298 | 26 | 327 | 6.23e-15 | 75.1 |
| MS.gene38815.t1 | MTR_2g070870 | 28.136 | 295 | 178 | 12 | 1 | 280 | 19 | 294 | 7.00e-15 | 74.7 |
| MS.gene38815.t1 | MTR_8g028435 | 24.601 | 313 | 206 | 12 | 6 | 303 | 56 | 353 | 8.46e-15 | 74.7 |
| MS.gene38815.t1 | MTR_3g045230 | 25.987 | 304 | 198 | 10 | 8 | 300 | 54 | 341 | 9.98e-15 | 74.3 |
| MS.gene38815.t1 | MTR_4g093840 | 24.194 | 310 | 215 | 10 | 4 | 303 | 56 | 355 | 1.02e-14 | 74.3 |
| MS.gene38815.t1 | MTR_2g069190 | 26.923 | 312 | 192 | 13 | 3 | 295 | 61 | 355 | 2.44e-14 | 73.6 |
| MS.gene38815.t1 | MTR_1g070080 | 32.237 | 152 | 90 | 5 | 117 | 263 | 144 | 287 | 2.94e-14 | 72.8 |
| MS.gene38815.t1 | MTR_1g070110 | 32.117 | 137 | 82 | 5 | 169 | 300 | 87 | 217 | 3.23e-14 | 71.2 |
| MS.gene38815.t1 | MTR_8g102600 | 23.669 | 338 | 219 | 12 | 1 | 313 | 1 | 324 | 4.40e-14 | 72.4 |
| MS.gene38815.t1 | MTR_2g019370 | 24.092 | 303 | 189 | 9 | 3 | 283 | 21 | 304 | 5.02e-14 | 72.0 |
| MS.gene38815.t1 | MTR_8g093980 | 22.848 | 302 | 219 | 9 | 10 | 302 | 59 | 355 | 6.10e-14 | 72.4 |
| MS.gene38815.t1 | MTR_5g005570 | 29.851 | 134 | 90 | 4 | 131 | 263 | 153 | 283 | 7.05e-14 | 71.6 |
| MS.gene38815.t1 | MTR_7g062560 | 32.540 | 126 | 81 | 3 | 181 | 304 | 220 | 343 | 1.11e-13 | 71.2 |
| MS.gene38815.t1 | MTR_3g072820 | 26.937 | 271 | 169 | 11 | 41 | 294 | 66 | 324 | 1.14e-13 | 71.2 |
| MS.gene38815.t1 | MTR_5g082750 | 26.205 | 332 | 197 | 16 | 4 | 315 | 44 | 347 | 1.16e-13 | 71.2 |
| MS.gene38815.t1 | MTR_0032s0040 | 26.217 | 267 | 183 | 9 | 2 | 263 | 61 | 318 | 1.17e-13 | 71.2 |
| MS.gene38815.t1 | MTR_4g024660 | 26.298 | 289 | 184 | 10 | 10 | 282 | 67 | 342 | 1.28e-13 | 71.2 |
| MS.gene38815.t1 | MTR_3g063180 | 28.249 | 177 | 119 | 4 | 116 | 286 | 151 | 325 | 1.35e-13 | 70.9 |
| MS.gene38815.t1 | MTR_7g451860 | 26.740 | 273 | 158 | 11 | 10 | 263 | 41 | 290 | 1.89e-13 | 70.5 |
| MS.gene38815.t1 | MTR_7g047670 | 26.740 | 273 | 158 | 11 | 10 | 263 | 41 | 290 | 1.89e-13 | 70.5 |
| MS.gene38815.t1 | MTR_3g072810 | 25.448 | 279 | 185 | 10 | 34 | 297 | 56 | 326 | 3.27e-13 | 69.7 |
| MS.gene38815.t1 | MTR_2g025120 | 23.377 | 308 | 219 | 8 | 11 | 312 | 5 | 301 | 3.38e-13 | 69.7 |
| MS.gene38815.t1 | MTR_8g009160 | 23.418 | 316 | 212 | 12 | 3 | 303 | 53 | 353 | 3.55e-13 | 69.7 |
| MS.gene38815.t1 | MTR_1g062110 | 25.418 | 299 | 187 | 13 | 10 | 288 | 66 | 348 | 4.48e-13 | 69.7 |
| MS.gene38815.t1 | MTR_3g040410 | 25.185 | 270 | 173 | 10 | 6 | 263 | 2 | 254 | 6.87e-13 | 68.6 |
| MS.gene38815.t1 | MTR_8g461330 | 38.710 | 93 | 53 | 2 | 184 | 273 | 203 | 294 | 8.25e-13 | 68.6 |
| MS.gene38815.t1 | MTR_8g062600 | 25.926 | 297 | 187 | 11 | 10 | 288 | 67 | 348 | 9.00e-13 | 68.6 |
| MS.gene38815.t1 | MTR_1g086550 | 38.272 | 81 | 49 | 1 | 184 | 264 | 203 | 282 | 1.16e-12 | 68.2 |
| MS.gene38815.t1 | MTR_2g083000 | 23.529 | 289 | 199 | 10 | 10 | 292 | 33 | 305 | 1.80e-12 | 67.4 |
| MS.gene38815.t1 | MTR_5g059140 | 24.503 | 302 | 190 | 11 | 2 | 282 | 31 | 315 | 2.46e-12 | 67.0 |
| MS.gene38815.t1 | MTR_2g072910 | 29.876 | 241 | 145 | 10 | 10 | 239 | 51 | 278 | 6.77e-12 | 65.5 |
| MS.gene38815.t1 | MTR_3g083370 | 31.655 | 139 | 90 | 4 | 185 | 320 | 173 | 309 | 7.81e-12 | 65.5 |
| MS.gene38815.t1 | MTR_5g085330 | 32.414 | 145 | 91 | 4 | 185 | 323 | 174 | 317 | 8.61e-12 | 65.5 |
| MS.gene38815.t1 | MTR_4g087130 | 28.947 | 152 | 100 | 4 | 150 | 298 | 180 | 326 | 9.01e-12 | 65.5 |
| MS.gene38815.t1 | MTR_2g068840 | 25.614 | 285 | 176 | 11 | 10 | 274 | 55 | 323 | 1.36e-11 | 65.1 |
| MS.gene38815.t1 | MTR_2g083030 | 29.577 | 142 | 79 | 5 | 141 | 263 | 145 | 284 | 2.25e-11 | 64.3 |
| MS.gene38815.t1 | MTR_1g043775 | 25.325 | 308 | 178 | 12 | 7 | 288 | 51 | 332 | 3.69e-11 | 63.9 |
| MS.gene38815.t1 | MTR_1g093110 | 22.483 | 298 | 194 | 8 | 10 | 288 | 70 | 349 | 3.82e-11 | 63.9 |
| MS.gene38815.t1 | MTR_1g070185 | 23.132 | 281 | 196 | 8 | 32 | 303 | 87 | 356 | 3.94e-11 | 63.9 |
| MS.gene38815.t1 | MTR_4g096840 | 31.132 | 106 | 69 | 2 | 184 | 286 | 202 | 306 | 5.23e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38815.t1 | AT1G52800 | 43.218 | 317 | 176 | 4 | 1 | 316 | 1 | 314 | 1.34e-93 | 281 |
| MS.gene38815.t1 | AT1G52820 | 42.812 | 320 | 176 | 5 | 1 | 316 | 1 | 317 | 1.03e-88 | 268 |
| MS.gene38815.t1 | AT1G52790 | 38.658 | 313 | 187 | 5 | 6 | 316 | 1 | 310 | 5.20e-80 | 246 |
| MS.gene38815.t1 | AT1G80320 | 37.975 | 316 | 185 | 6 | 8 | 316 | 7 | 318 | 5.88e-78 | 241 |
| MS.gene38815.t1 | AT4G03070 | 41.562 | 320 | 171 | 7 | 5 | 315 | 9 | 321 | 1.27e-76 | 238 |
| MS.gene38815.t1 | AT1G52820 | 40.756 | 238 | 137 | 3 | 1 | 236 | 1 | 236 | 9.15e-61 | 195 |
| MS.gene38815.t1 | AT1G15540 | 36.646 | 322 | 192 | 8 | 2 | 316 | 3 | 319 | 1.20e-60 | 196 |
| MS.gene38815.t1 | AT1G15540 | 36.646 | 322 | 192 | 8 | 2 | 316 | 3 | 319 | 1.20e-60 | 196 |
| MS.gene38815.t1 | AT1G15540 | 36.646 | 322 | 192 | 8 | 2 | 316 | 6 | 322 | 1.28e-60 | 196 |
| MS.gene38815.t1 | AT1G15540 | 36.646 | 322 | 192 | 8 | 2 | 316 | 10 | 326 | 1.34e-60 | 197 |
| MS.gene38815.t1 | AT1G52810 | 34.277 | 318 | 168 | 8 | 5 | 316 | 7 | 289 | 1.56e-53 | 177 |
| MS.gene38815.t1 | AT1G28030 | 33.232 | 328 | 201 | 10 | 1 | 316 | 1 | 322 | 4.05e-51 | 172 |
| MS.gene38815.t1 | AT4G03050 | 40.113 | 177 | 100 | 3 | 1 | 177 | 1 | 171 | 7.34e-34 | 129 |
| MS.gene38815.t1 | AT4G03050 | 40.000 | 140 | 79 | 4 | 181 | 317 | 271 | 408 | 5.35e-28 | 112 |
| MS.gene38815.t1 | AT4G03050 | 40.113 | 177 | 100 | 3 | 1 | 177 | 1 | 171 | 7.34e-34 | 129 |
| MS.gene38815.t1 | AT4G03050 | 40.000 | 140 | 79 | 4 | 181 | 317 | 271 | 408 | 5.35e-28 | 112 |
| MS.gene38815.t1 | AT5G51810 | 26.733 | 303 | 200 | 9 | 10 | 300 | 63 | 355 | 4.10e-24 | 101 |
| MS.gene38815.t1 | AT3G21420 | 29.801 | 302 | 201 | 9 | 10 | 304 | 55 | 352 | 5.87e-24 | 100 |
| MS.gene38815.t1 | AT5G07200 | 27.124 | 306 | 203 | 11 | 10 | 300 | 58 | 358 | 2.77e-23 | 99.4 |
| MS.gene38815.t1 | AT4G21690 | 25.926 | 297 | 194 | 7 | 4 | 286 | 41 | 325 | 4.84e-23 | 98.2 |
| MS.gene38815.t1 | AT1G17020 | 28.276 | 290 | 184 | 9 | 10 | 286 | 53 | 331 | 6.28e-23 | 97.8 |
| MS.gene38815.t1 | AT1G80330 | 27.675 | 271 | 168 | 9 | 4 | 261 | 43 | 298 | 6.96e-23 | 97.8 |
| MS.gene38815.t1 | AT1G78550 | 28.076 | 317 | 195 | 13 | 1 | 300 | 44 | 344 | 5.86e-22 | 95.1 |
| MS.gene38815.t1 | AT4G25300 | 28.931 | 318 | 175 | 15 | 10 | 301 | 52 | 344 | 6.03e-22 | 95.1 |
| MS.gene38815.t1 | AT4G25420 | 25.466 | 322 | 223 | 9 | 10 | 320 | 61 | 376 | 6.53e-22 | 95.5 |
| MS.gene38815.t1 | AT4G25310 | 33.761 | 234 | 128 | 11 | 63 | 281 | 99 | 320 | 1.42e-21 | 94.0 |
| MS.gene38815.t1 | AT4G23340 | 26.710 | 307 | 188 | 11 | 10 | 299 | 10 | 296 | 2.27e-21 | 93.2 |
| MS.gene38815.t1 | AT2G38240 | 28.188 | 298 | 191 | 10 | 10 | 295 | 48 | 334 | 4.52e-21 | 92.8 |
| MS.gene38815.t1 | AT1G17010 | 27.922 | 308 | 191 | 13 | 10 | 301 | 54 | 346 | 1.45e-20 | 91.3 |
| MS.gene38815.t1 | AT1G78550 | 30.980 | 255 | 146 | 12 | 63 | 300 | 25 | 266 | 3.62e-20 | 89.0 |
| MS.gene38815.t1 | AT1G30040 | 29.474 | 285 | 164 | 10 | 7 | 273 | 28 | 293 | 6.19e-20 | 89.4 |
| MS.gene38815.t1 | AT5G05600 | 28.115 | 313 | 209 | 10 | 10 | 313 | 62 | 367 | 1.54e-19 | 88.6 |
| MS.gene38815.t1 | AT5G07480 | 25.545 | 321 | 206 | 9 | 4 | 305 | 38 | 344 | 1.99e-19 | 88.2 |
| MS.gene38815.t1 | AT1G14120 | 24.161 | 298 | 191 | 6 | 6 | 290 | 4 | 279 | 1.18e-18 | 85.1 |
| MS.gene38815.t1 | AT1G14120 | 24.161 | 298 | 191 | 6 | 6 | 290 | 4 | 279 | 1.18e-18 | 85.1 |
| MS.gene38815.t1 | AT1G14120 | 24.161 | 298 | 191 | 6 | 6 | 290 | 4 | 279 | 1.18e-18 | 85.1 |
| MS.gene38815.t1 | AT1G14130 | 25.177 | 282 | 196 | 5 | 9 | 287 | 8 | 277 | 1.45e-18 | 85.1 |
| MS.gene38815.t1 | AT2G36690 | 32.990 | 194 | 117 | 8 | 118 | 306 | 167 | 352 | 3.56e-18 | 84.7 |
| MS.gene38815.t1 | AT2G36690 | 32.990 | 194 | 117 | 8 | 118 | 306 | 167 | 352 | 3.56e-18 | 84.7 |
| MS.gene38815.t1 | AT1G44090 | 33.333 | 177 | 108 | 4 | 125 | 299 | 191 | 359 | 6.25e-18 | 84.0 |
| MS.gene38815.t1 | AT3G19010 | 24.407 | 295 | 199 | 9 | 10 | 286 | 28 | 316 | 7.77e-18 | 83.6 |
| MS.gene38815.t1 | AT3G19010 | 24.407 | 295 | 199 | 9 | 10 | 286 | 28 | 316 | 7.77e-18 | 83.6 |
| MS.gene38815.t1 | AT4G23340 | 32.099 | 162 | 99 | 6 | 140 | 299 | 26 | 178 | 1.21e-17 | 80.5 |
| MS.gene38815.t1 | AT3G50210 | 27.698 | 278 | 176 | 8 | 10 | 263 | 8 | 284 | 1.27e-17 | 82.8 |
| MS.gene38815.t1 | AT3G50210 | 27.698 | 278 | 176 | 8 | 10 | 263 | 8 | 284 | 1.27e-17 | 82.8 |
| MS.gene38815.t1 | AT3G50210 | 27.698 | 278 | 176 | 8 | 10 | 263 | 8 | 284 | 1.27e-17 | 82.8 |
| MS.gene38815.t1 | AT4G25300 | 37.681 | 138 | 77 | 4 | 166 | 301 | 120 | 250 | 1.82e-17 | 81.3 |
| MS.gene38815.t1 | AT1G15550 | 25.597 | 293 | 196 | 8 | 10 | 292 | 57 | 337 | 1.88e-17 | 82.4 |
| MS.gene38815.t1 | AT1G78440 | 26.296 | 270 | 170 | 9 | 9 | 264 | 17 | 271 | 1.01e-16 | 80.1 |
| MS.gene38815.t1 | AT5G24530 | 23.667 | 300 | 216 | 5 | 6 | 300 | 32 | 323 | 2.71e-16 | 79.0 |
| MS.gene38815.t1 | AT2G34555 | 28.090 | 267 | 165 | 9 | 9 | 264 | 26 | 276 | 3.60e-16 | 78.6 |
| MS.gene38815.t1 | AT5G08640 | 25.574 | 305 | 193 | 9 | 10 | 297 | 43 | 330 | 5.59e-16 | 77.8 |
| MS.gene38815.t1 | AT5G08640 | 25.574 | 305 | 193 | 9 | 10 | 297 | 43 | 330 | 5.59e-16 | 77.8 |
| MS.gene38815.t1 | AT5G20550 | 26.578 | 301 | 200 | 10 | 10 | 298 | 45 | 336 | 1.29e-15 | 77.0 |
| MS.gene38815.t1 | AT5G20400 | 26.198 | 313 | 202 | 10 | 10 | 307 | 45 | 343 | 1.43e-15 | 77.0 |
| MS.gene38815.t1 | AT4G22880 | 26.384 | 307 | 206 | 11 | 10 | 302 | 47 | 347 | 1.68e-15 | 76.6 |
| MS.gene38815.t1 | AT4G22880 | 26.384 | 307 | 206 | 11 | 10 | 302 | 47 | 347 | 1.68e-15 | 76.6 |
| MS.gene38815.t1 | AT4G22880 | 26.384 | 307 | 206 | 11 | 10 | 302 | 47 | 347 | 1.68e-15 | 76.6 |
| MS.gene38815.t1 | AT5G51810 | 25.417 | 240 | 160 | 7 | 10 | 239 | 63 | 293 | 2.46e-15 | 75.5 |
| MS.gene38815.t1 | AT5G43440 | 23.860 | 285 | 201 | 8 | 10 | 286 | 62 | 338 | 2.72e-15 | 76.3 |
| MS.gene38815.t1 | AT3G13610 | 26.948 | 308 | 186 | 15 | 8 | 298 | 60 | 345 | 3.09e-15 | 75.9 |
| MS.gene38815.t1 | AT5G07480 | 28.426 | 197 | 130 | 5 | 117 | 305 | 42 | 235 | 3.41e-15 | 74.3 |
| MS.gene38815.t1 | AT3G11180 | 26.897 | 290 | 195 | 9 | 34 | 313 | 114 | 396 | 5.40e-15 | 75.5 |
| MS.gene38815.t1 | AT1G55290 | 27.157 | 313 | 192 | 16 | 4 | 300 | 56 | 348 | 6.38e-15 | 75.1 |
| MS.gene38815.t1 | AT3G11180 | 27.509 | 269 | 181 | 8 | 34 | 292 | 114 | 378 | 8.31e-15 | 75.1 |
| MS.gene38815.t1 | AT3G49620 | 24.916 | 297 | 200 | 9 | 9 | 284 | 33 | 327 | 9.60e-15 | 74.7 |
| MS.gene38815.t1 | AT4G25310 | 30.603 | 232 | 110 | 11 | 63 | 281 | 99 | 292 | 1.14e-14 | 73.9 |
| MS.gene38815.t1 | AT5G59530 | 25.862 | 290 | 196 | 9 | 10 | 288 | 58 | 339 | 1.34e-14 | 74.3 |
| MS.gene38815.t1 | AT5G54000 | 26.183 | 317 | 204 | 12 | 2 | 296 | 33 | 341 | 1.48e-14 | 73.9 |
| MS.gene38815.t1 | AT5G54000 | 28.679 | 265 | 162 | 10 | 51 | 296 | 5 | 261 | 1.96e-14 | 72.8 |
| MS.gene38815.t1 | AT5G63590 | 27.152 | 302 | 172 | 12 | 10 | 287 | 14 | 291 | 3.00e-14 | 72.8 |
| MS.gene38815.t1 | AT3G49630 | 26.715 | 277 | 177 | 9 | 9 | 263 | 8 | 280 | 3.92e-14 | 72.4 |
| MS.gene38815.t1 | AT3G19010 | 33.962 | 106 | 66 | 3 | 184 | 286 | 182 | 286 | 5.87e-14 | 72.0 |
| MS.gene38815.t1 | AT1G02400 | 26.282 | 312 | 196 | 13 | 2 | 294 | 13 | 309 | 6.04e-14 | 72.0 |
| MS.gene38815.t1 | AT1G49390 | 25.347 | 288 | 178 | 11 | 36 | 302 | 69 | 340 | 8.34e-14 | 71.6 |
| MS.gene38815.t1 | AT5G59540 | 25.163 | 306 | 216 | 8 | 3 | 300 | 53 | 353 | 1.29e-13 | 71.2 |
| MS.gene38815.t1 | AT3G55970 | 26.073 | 303 | 200 | 10 | 10 | 298 | 52 | 344 | 1.34e-13 | 71.2 |
| MS.gene38815.t1 | AT5G63600 | 26.207 | 290 | 198 | 8 | 10 | 295 | 33 | 310 | 1.45e-13 | 70.9 |
| MS.gene38815.t1 | AT3G49630 | 26.966 | 267 | 176 | 8 | 12 | 263 | 14 | 276 | 1.82e-13 | 70.5 |
| MS.gene38815.t1 | AT1G49390 | 26.007 | 273 | 165 | 11 | 51 | 302 | 5 | 261 | 2.03e-13 | 69.7 |
| MS.gene38815.t1 | AT3G50210 | 29.139 | 151 | 102 | 2 | 118 | 263 | 52 | 202 | 2.16e-13 | 69.3 |
| MS.gene38815.t1 | AT1G80340 | 25.589 | 297 | 195 | 11 | 8 | 292 | 48 | 330 | 3.63e-13 | 69.7 |
| MS.gene38815.t1 | AT1G77330 | 25.559 | 313 | 201 | 10 | 10 | 306 | 3 | 299 | 1.14e-12 | 68.2 |
| MS.gene38815.t1 | AT1G06650 | 23.948 | 309 | 210 | 11 | 8 | 303 | 62 | 358 | 1.94e-12 | 67.8 |
| MS.gene38815.t1 | AT3G12900 | 32.812 | 128 | 80 | 4 | 174 | 298 | 216 | 340 | 1.98e-12 | 67.8 |
| MS.gene38815.t1 | AT5G63595 | 26.437 | 261 | 157 | 10 | 7 | 262 | 22 | 252 | 2.07e-12 | 67.0 |
| MS.gene38815.t1 | AT1G60980 | 26.374 | 182 | 126 | 4 | 121 | 300 | 179 | 354 | 2.11e-12 | 67.8 |
| MS.gene38815.t1 | AT1G06640 | 25.000 | 312 | 203 | 13 | 8 | 303 | 62 | 358 | 2.45e-12 | 67.4 |
| MS.gene38815.t1 | AT4G21200 | 36.709 | 79 | 48 | 2 | 185 | 263 | 211 | 287 | 2.73e-12 | 67.0 |
| MS.gene38815.t1 | AT4G16330 | 24.453 | 274 | 181 | 6 | 10 | 272 | 67 | 325 | 3.60e-12 | 67.0 |
| MS.gene38815.t1 | AT3G19000 | 27.174 | 184 | 126 | 4 | 118 | 298 | 151 | 329 | 3.67e-12 | 67.0 |
| MS.gene38815.t1 | AT5G43935 | 26.246 | 301 | 189 | 12 | 6 | 299 | 15 | 289 | 4.02e-12 | 66.2 |
| MS.gene38815.t1 | AT3G60290 | 25.159 | 314 | 213 | 11 | 1 | 305 | 45 | 345 | 4.16e-12 | 66.6 |
| MS.gene38815.t1 | AT4G10500 | 24.839 | 310 | 211 | 9 | 4 | 303 | 38 | 335 | 5.59e-12 | 66.2 |
| MS.gene38815.t1 | AT3G61400 | 28.000 | 175 | 106 | 5 | 127 | 288 | 179 | 346 | 8.45e-12 | 65.9 |
| MS.gene38815.t1 | AT4G16330 | 27.097 | 155 | 111 | 2 | 118 | 272 | 67 | 219 | 9.25e-12 | 64.7 |
| MS.gene38815.t1 | AT4G10490 | 23.975 | 317 | 197 | 11 | 4 | 300 | 36 | 328 | 1.21e-11 | 65.1 |
| MS.gene38815.t1 | AT3G49630 | 27.891 | 147 | 104 | 2 | 118 | 263 | 62 | 207 | 3.17e-11 | 63.2 |
| MS.gene38815.t1 | AT5G43450 | 21.918 | 292 | 196 | 8 | 10 | 286 | 61 | 335 | 3.50e-11 | 63.9 |
| MS.gene38815.t1 | AT1G50960 | 21.875 | 256 | 191 | 7 | 10 | 263 | 40 | 288 | 6.07e-11 | 63.2 |
| MS.gene38815.t1 | AT2G30840 | 23.792 | 269 | 183 | 9 | 5 | 263 | 52 | 308 | 7.36e-11 | 62.8 |
Find 62 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTGAGGCCATATGATT+TGG | 0.222616 | 7.1:-16753480 | None:intergenic |
| CTCAAGGAAATGATCGTTTC+TGG | 0.227781 | 7.1:+16753494 | MS.gene38815:CDS |
| CAGTACCAGGTTTCATGTTT+TGG | 0.231503 | 7.1:-16753189 | None:intergenic |
| ACTTCCCTTATATGAATCTT+TGG | 0.231965 | 7.1:+16753414 | MS.gene38815:CDS |
| CTTTGTGACAATGTTATCTT+TGG | 0.236841 | 7.1:+16753301 | MS.gene38815:CDS |
| TGACATCCAAGCAAAGTTAA+TGG | 0.245998 | 7.1:-16753448 | None:intergenic |
| GTAGCACACTATGATAAAAT+TGG | 0.271878 | 7.1:+16753271 | MS.gene38815:CDS |
| AGAGATGGATGAGAAGGATT+TGG | 0.277633 | 7.1:+16753919 | MS.gene38815:CDS |
| CTTGAAATTAATTCCACAAT+AGG | 0.286246 | 7.1:-16754727 | None:intergenic |
| TCTTCATTCACAAGCTCTTC+TGG | 0.299018 | 7.1:-16754609 | None:intergenic |
| GATATCCAAAGATTCATATA+AGG | 0.300354 | 7.1:-16753419 | None:intergenic |
| TAGGCTTCCATGCGTGAAAT+AGG | 0.309671 | 7.1:-16754708 | None:intergenic |
| GAGATGGATGAGAAGGATTT+GGG | 0.312045 | 7.1:+16753920 | MS.gene38815:CDS |
| CATCAGCTGAATAATCTAAA+TGG | 0.322117 | 7.1:+16753983 | MS.gene38815:CDS |
| ACACCATCCTCTTGGCTATA+TGG | 0.326111 | 7.1:-16753808 | None:intergenic |
| TCCTCCTTTGTTGTCTTAGC+AGG | 0.355615 | 7.1:+16754058 | MS.gene38815:CDS |
| TCCTTGAGGCCATATGATTT+GGG | 0.367701 | 7.1:-16753479 | None:intergenic |
| CAAGATCCATTAACTTTGCT+TGG | 0.372632 | 7.1:+16753442 | MS.gene38815:CDS |
| CAAGCAAAGTTAATGGATCT+TGG | 0.383763 | 7.1:-16753441 | None:intergenic |
| TTATCTTCGTTTCTTTCAAA+AGG | 0.384813 | 7.1:+16754671 | MS.gene38815:CDS |
| AGAATTCTTCAAGCTCCCTT+TGG | 0.396656 | 7.1:+16753330 | MS.gene38815:CDS |
| TGATTCATTCATATTGTTGA+AGG | 0.421437 | 7.1:-16754750 | None:intergenic |
| AATGAGTACTCCAAGTTGTT+GGG | 0.430080 | 7.1:+16753776 | MS.gene38815:CDS |
| CTGATGTACTACAGATATAA+TGG | 0.431408 | 7.1:-16753966 | None:intergenic |
| CAATGAGTACTCCAAGTTGT+TGG | 0.433273 | 7.1:+16753775 | MS.gene38815:CDS |
| AAATATTCACCCAAATCATA+TGG | 0.458108 | 7.1:+16753470 | MS.gene38815:CDS |
| GTCTAATTCTCCCAACAACT+TGG | 0.471003 | 7.1:-16753786 | None:intergenic |
| ATATCCAAAGATTCATATAA+GGG | 0.472934 | 7.1:-16753418 | None:intergenic |
| AACAAGAGAGATGGATGAGA+AGG | 0.485145 | 7.1:+16753913 | MS.gene38815:CDS |
| CTTAGCAGGTGACGCATTCA+CGG | 0.492976 | 7.1:+16754072 | MS.gene38815:CDS |
| AGACCTTTCCATGGCTACTC+AGG | 0.493237 | 7.1:+16753379 | MS.gene38815:CDS |
| AAGACATCACTAGAAGACTA+TGG | 0.497076 | 7.1:+16753241 | MS.gene38815:CDS |
| TGGAGAATGGACTGAGGTAG+AGG | 0.502256 | 7.1:+16754027 | MS.gene38815:CDS |
| GAGACCCATGTGTCAGTACC+AGG | 0.507954 | 7.1:-16753202 | None:intergenic |
| TGGTCGGACAAGTCAACGAC+AGG | 0.511942 | 7.1:-16753169 | None:intergenic |
| GCTCTCAAACACCATCCTCT+TGG | 0.513795 | 7.1:-16753816 | None:intergenic |
| GAATGTTGGTTTAAAACGCA+AGG | 0.545143 | 7.1:-16754637 | None:intergenic |
| TAATCGTAATGGTCGAATGT+TGG | 0.545755 | 7.1:-16754651 | None:intergenic |
| TCACGCATGGAAGCCTATTG+TGG | 0.551906 | 7.1:+16754714 | MS.gene38815:CDS |
| GAAAGAACCTATTTCACGCA+TGG | 0.566650 | 7.1:+16754701 | MS.gene38815:CDS |
| AGAGTTGTCCTGAGTAGCCA+TGG | 0.568925 | 7.1:-16753387 | None:intergenic |
| AGAAACGAAGATAATCGTAA+TGG | 0.569970 | 7.1:-16754662 | None:intergenic |
| GAAATATAGAACAAGAGAGA+TGG | 0.576102 | 7.1:+16753904 | MS.gene38815:CDS |
| TGAAACCTGGTACTGACACA+TGG | 0.585719 | 7.1:+16753197 | MS.gene38815:CDS |
| ACCCAAATCATATGGCCTCA+AGG | 0.588328 | 7.1:+16753478 | MS.gene38815:CDS |
| TCCGACCAAAACATGAAACC+TGG | 0.592020 | 7.1:+16753184 | MS.gene38815:CDS |
| GACAACAAAGGAGGAAGGTG+AGG | 0.605347 | 7.1:-16754050 | None:intergenic |
| GCTAGATATGGAGTAACGGA+AGG | 0.611665 | 7.1:+16754493 | MS.gene38815:intron |
| AGGATGGTGTTTGAGAGCTA+TGG | 0.620143 | 7.1:+16753821 | MS.gene38815:CDS |
| AATGTTGGTTTAAAACGCAA+GGG | 0.621011 | 7.1:-16754636 | None:intergenic |
| ATTTGCTAGATATGGAGTAA+CGG | 0.622192 | 7.1:+16754489 | MS.gene38815:intron |
| ATAATGGTCAAGTCTGAATG+AGG | 0.623723 | 7.1:-16753950 | None:intergenic |
| TGTCCTGAGTAGCCATGGAA+AGG | 0.627328 | 7.1:-16753382 | None:intergenic |
| ATAAGTGATAGACCTTTCCA+TGG | 0.632144 | 7.1:+16753370 | MS.gene38815:CDS |
| GAAACCTGGTACTGACACAT+GGG | 0.636146 | 7.1:+16753198 | MS.gene38815:CDS |
| AGACCATATAGCCAAGAGGA+TGG | 0.645865 | 7.1:+16753805 | MS.gene38815:CDS |
| GCTAAGACAACAAAGGAGGA+AGG | 0.646880 | 7.1:-16754055 | None:intergenic |
| CAGAAACGATCATTTCCTTG+AGG | 0.669988 | 7.1:-16753493 | None:intergenic |
| ACCTGCTAAGACAACAAAGG+AGG | 0.674762 | 7.1:-16754059 | None:intergenic |
| AATTAGACCATATAGCCAAG+AGG | 0.706366 | 7.1:+16753801 | MS.gene38815:CDS |
| GGTCGGACAAGTCAACGACA+GGG | 0.708711 | 7.1:-16753168 | None:intergenic |
| GTCACCTGCTAAGACAACAA+AGG | 0.733687 | 7.1:-16754062 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATAAATATATATTTTGA+TGG | - | chr7.1:16753713-16753732 | None:intergenic | 10.0% |
| !!! | TATTTTTTATTTGCTAGATA+TGG | + | chr7.1:16754481-16754500 | MS.gene38815:intron | 15.0% |
| !! | ATATCCAAAGATTCATATAA+GGG | - | chr7.1:16753421-16753440 | None:intergenic | 20.0% |
| !! | ATTAATCTCTTAAACTTTGT+AGG | - | chr7.1:16754295-16754314 | None:intergenic | 20.0% |
| !! | TTCGATACAAAAAATATTGT+CGG | + | chr7.1:16754338-16754357 | MS.gene38815:intron | 20.0% |
| !! | TTGCAAATCAAATTGAAAAA+TGG | + | chr7.1:16754007-16754026 | MS.gene38815:CDS | 20.0% |
| !!! | TTGTCTAAAATATAATTGTC+TGG | + | chr7.1:16754130-16754149 | MS.gene38815:intron | 20.0% |
| ! | AAATATTCACCCAAATCATA+TGG | + | chr7.1:16753470-16753489 | MS.gene38815:CDS | 25.0% |
| ! | CTTGAAATTAATTCCACAAT+AGG | - | chr7.1:16754730-16754749 | None:intergenic | 25.0% |
| ! | GATATCCAAAGATTCATATA+AGG | - | chr7.1:16753422-16753441 | None:intergenic | 25.0% |
| ! | TCAAATTGAAAAATGGAGAA+TGG | + | chr7.1:16754014-16754033 | MS.gene38815:CDS | 25.0% |
| ! | TCGATACAAAAAATATTGTC+GGG | + | chr7.1:16754339-16754358 | MS.gene38815:intron | 25.0% |
| ! | TGTTTATGATTGAGAATTAG+AGG | - | chr7.1:16754106-16754125 | None:intergenic | 25.0% |
| ! | TTATCTTCGTTTCTTTCAAA+AGG | + | chr7.1:16754671-16754690 | MS.gene38815:CDS | 25.0% |
| !!! | TAGACAAACATGTGTTTTTT+TGG | - | chr7.1:16754442-16754461 | None:intergenic | 25.0% |
| AAAACACATGTTTGTCTAGT+TGG | + | chr7.1:16754444-16754463 | MS.gene38815:intron | 30.0% | |
| AAACACATGTTTGTCTAGTT+GGG | + | chr7.1:16754445-16754464 | MS.gene38815:intron | 30.0% | |
| AATACATATTCAAGATCGGT+CGG | - | chr7.1:16754231-16754250 | None:intergenic | 30.0% | |
| ACTTCCCTTATATGAATCTT+TGG | + | chr7.1:16753414-16753433 | MS.gene38815:CDS | 30.0% | |
| AGAAACGAAGATAATCGTAA+TGG | - | chr7.1:16754665-16754684 | None:intergenic | 30.0% | |
| CATCAGCTGAATAATCTAAA+TGG | + | chr7.1:16753983-16754002 | MS.gene38815:CDS | 30.0% | |
| CGCTAATACATATTCAAGAT+CGG | - | chr7.1:16754235-16754254 | None:intergenic | 30.0% | |
| CTGATGTACTACAGATATAA+TGG | - | chr7.1:16753969-16753988 | None:intergenic | 30.0% | |
| CTTTGTGACAATGTTATCTT+TGG | + | chr7.1:16753301-16753320 | MS.gene38815:CDS | 30.0% | |
| GAAATATAGAACAAGAGAGA+TGG | + | chr7.1:16753904-16753923 | MS.gene38815:CDS | 30.0% | |
| GTAGCACACTATGATAAAAT+TGG | + | chr7.1:16753271-16753290 | MS.gene38815:CDS | 30.0% | |
| ! | ATTTGCTAGATATGGAGTAA+CGG | + | chr7.1:16754489-16754508 | MS.gene38815:intron | 30.0% |
| ! | TTCTTTTGCTGGTAAGATTA+TGG | + | chr7.1:16754581-16754600 | MS.gene38815:CDS | 30.0% |
| !! | AATGTTGGTTTAAAACGCAA+GGG | - | chr7.1:16754639-16754658 | None:intergenic | 30.0% |
| AAGACATCACTAGAAGACTA+TGG | + | chr7.1:16753241-16753260 | MS.gene38815:CDS | 35.0% | |
| AATGAGTACTCCAAGTTGTT+GGG | + | chr7.1:16753776-16753795 | MS.gene38815:CDS | 35.0% | |
| AATTAGACCATATAGCCAAG+AGG | + | chr7.1:16753801-16753820 | MS.gene38815:CDS | 35.0% | |
| ATAAGTGATAGACCTTTCCA+TGG | + | chr7.1:16753370-16753389 | MS.gene38815:CDS | 35.0% | |
| ATAATGGTCAAGTCTGAATG+AGG | - | chr7.1:16753953-16753972 | None:intergenic | 35.0% | |
| ATCGAACATGTCAACTCAAT+AGG | + | chr7.1:16754367-16754386 | MS.gene38815:intron | 35.0% | |
| CAAGATCCATTAACTTTGCT+TGG | + | chr7.1:16753442-16753461 | MS.gene38815:CDS | 35.0% | |
| CTAATTTGAACTCGAGACAT+TGG | - | chr7.1:16754205-16754224 | None:intergenic | 35.0% | |
| GTCATCTAAACATTGTGAGT+CGG | - | chr7.1:16754157-16754176 | None:intergenic | 35.0% | |
| TAATCGTAATGGTCGAATGT+TGG | - | chr7.1:16754654-16754673 | None:intergenic | 35.0% | |
| TGACATCCAAGCAAAGTTAA+TGG | - | chr7.1:16753451-16753470 | None:intergenic | 35.0% | |
| TGTCAACTCAATAGGACATT+TGG | + | chr7.1:16754375-16754394 | MS.gene38815:intron | 35.0% | |
| ! | CAAGCAAAGTTAATGGATCT+TGG | - | chr7.1:16753444-16753463 | None:intergenic | 35.0% |
| ! | GCTGCATTATTTTCTTTTGC+TGG | + | chr7.1:16754570-16754589 | MS.gene38815:CDS | 35.0% |
| ! | TGATTTTCTCAAATCGTGTC+TGG | + | chr7.1:16753639-16753658 | MS.gene38815:intron | 35.0% |
| !! | GAATGTTGGTTTAAAACGCA+AGG | - | chr7.1:16754640-16754659 | None:intergenic | 35.0% |
| !! | TTTGCGCTTTTGTTTCCAAA+GGG | - | chr7.1:16753348-16753367 | None:intergenic | 35.0% |
| !! | TTTTGCGCTTTTGTTTCCAA+AGG | - | chr7.1:16753349-16753368 | None:intergenic | 35.0% |
| AACAAGAGAGATGGATGAGA+AGG | + | chr7.1:16753913-16753932 | MS.gene38815:CDS | 40.0% | |
| AGAATTCTTCAAGCTCCCTT+TGG | + | chr7.1:16753330-16753349 | MS.gene38815:CDS | 40.0% | |
| AGAGATGGATGAGAAGGATT+TGG | + | chr7.1:16753919-16753938 | MS.gene38815:CDS | 40.0% | |
| ATATAAGCACAGACACTCCT+CGG | + | chr7.1:16753536-16753555 | MS.gene38815:intron | 40.0% | |
| ATGAAGCACAGATACAGACA+CGG | - | chr7.1:16753668-16753687 | None:intergenic | 40.0% | |
| CAATGAGTACTCCAAGTTGT+TGG | + | chr7.1:16753775-16753794 | MS.gene38815:CDS | 40.0% | |
| CAGAAACGATCATTTCCTTG+AGG | - | chr7.1:16753496-16753515 | None:intergenic | 40.0% | |
| CTCAAGGAAATGATCGTTTC+TGG | + | chr7.1:16753494-16753513 | MS.gene38815:CDS | 40.0% | |
| GAAAGAACCTATTTCACGCA+TGG | + | chr7.1:16754701-16754720 | MS.gene38815:CDS | 40.0% | |
| GAGATGGATGAGAAGGATTT+GGG | + | chr7.1:16753920-16753939 | MS.gene38815:CDS | 40.0% | |
| GAGTGTCTGTGCTTATATTG+TGG | - | chr7.1:16753534-16753553 | None:intergenic | 40.0% | |
| GTCTAATTCTCCCAACAACT+TGG | - | chr7.1:16753789-16753808 | None:intergenic | 40.0% | |
| TATAACTGTCAGTGTCGTGT+CGG | - | chr7.1:16753603-16753622 | None:intergenic | 40.0% | |
| TCCTTGAGGCCATATGATTT+GGG | - | chr7.1:16753482-16753501 | None:intergenic | 40.0% | |
| TCTTCATTCACAAGCTCTTC+TGG | - | chr7.1:16754612-16754631 | None:intergenic | 40.0% | |
| TTCCTTGAGGCCATATGATT+TGG | - | chr7.1:16753483-16753502 | None:intergenic | 40.0% | |
| ! | CAGTACCAGGTTTCATGTTT+TGG | - | chr7.1:16753192-16753211 | None:intergenic | 40.0% |
| !! | AGGAAATGATCGTTTCTGGT+TGG | + | chr7.1:16753498-16753517 | MS.gene38815:intron | 40.0% |
| !! | GAAAAATGGAGAATGGACTG+AGG | + | chr7.1:16754021-16754040 | MS.gene38815:CDS | 40.0% |
| !!! | ACCAGGTTTCATGTTTTGGT+CGG | - | chr7.1:16753188-16753207 | None:intergenic | 40.0% |
| ACACCATCCTCTTGGCTATA+TGG | - | chr7.1:16753811-16753830 | None:intergenic | 45.0% | |
| ACCCAAATCATATGGCCTCA+AGG | + | chr7.1:16753478-16753497 | MS.gene38815:CDS | 45.0% | |
| ACCTGCTAAGACAACAAAGG+AGG | - | chr7.1:16754062-16754081 | None:intergenic | 45.0% | |
| AGACCATATAGCCAAGAGGA+TGG | + | chr7.1:16753805-16753824 | MS.gene38815:CDS | 45.0% | |
| AGGATGGTGTTTGAGAGCTA+TGG | + | chr7.1:16753821-16753840 | MS.gene38815:CDS | 45.0% | |
| GCTAAGACAACAAAGGAGGA+AGG | - | chr7.1:16754058-16754077 | None:intergenic | 45.0% | |
| GTCACCTGCTAAGACAACAA+AGG | - | chr7.1:16754065-16754084 | None:intergenic | 45.0% | |
| TAGGCTTCCATGCGTGAAAT+AGG | - | chr7.1:16754711-16754730 | None:intergenic | 45.0% | |
| TCCGACCAAAACATGAAACC+TGG | + | chr7.1:16753184-16753203 | MS.gene38815:CDS | 45.0% | |
| ! | GCTAGATATGGAGTAACGGA+AGG | + | chr7.1:16754493-16754512 | MS.gene38815:intron | 45.0% |
| ! | TCCTCCTTTGTTGTCTTAGC+AGG | + | chr7.1:16754058-16754077 | MS.gene38815:CDS | 45.0% |
| !! | GAAACCTGGTACTGACACAT+GGG | + | chr7.1:16753198-16753217 | MS.gene38815:CDS | 45.0% |
| !! | TGAAACCTGGTACTGACACA+TGG | + | chr7.1:16753197-16753216 | MS.gene38815:CDS | 45.0% |
| ACACGACACGTGTATGACAC+CGG | - | chr7.1:16753574-16753593 | None:intergenic | 50.0% | |
| AGACCTTTCCATGGCTACTC+AGG | + | chr7.1:16753379-16753398 | MS.gene38815:CDS | 50.0% | |
| AGAGTTGTCCTGAGTAGCCA+TGG | - | chr7.1:16753390-16753409 | None:intergenic | 50.0% | |
| CTTAGCAGGTGACGCATTCA+CGG | + | chr7.1:16754072-16754091 | MS.gene38815:CDS | 50.0% | |
| GACAACAAAGGAGGAAGGTG+AGG | - | chr7.1:16754053-16754072 | None:intergenic | 50.0% | |
| GCTCTCAAACACCATCCTCT+TGG | - | chr7.1:16753819-16753838 | None:intergenic | 50.0% | |
| TCACGCATGGAAGCCTATTG+TGG | + | chr7.1:16754714-16754733 | MS.gene38815:CDS | 50.0% | |
| TGTCCTGAGTAGCCATGGAA+AGG | - | chr7.1:16753385-16753404 | None:intergenic | 50.0% | |
| !! | TGGAGAATGGACTGAGGTAG+AGG | + | chr7.1:16754027-16754046 | MS.gene38815:CDS | 50.0% |
| CACGACACGTGTATGACACC+GGG | - | chr7.1:16753573-16753592 | None:intergenic | 55.0% | |
| GAGACCCATGTGTCAGTACC+AGG | - | chr7.1:16753205-16753224 | None:intergenic | 55.0% | |
| GGTCGGACAAGTCAACGACA+GGG | - | chr7.1:16753171-16753190 | None:intergenic | 55.0% | |
| TGGTCGGACAAGTCAACGAC+AGG | - | chr7.1:16753172-16753191 | None:intergenic | 55.0% | |
| ! | TCCTCGGATTAGACGTGTCC+CGG | + | chr7.1:16753552-16753571 | MS.gene38815:intron | 55.0% |
| ! | TGTCAGTGTCGTGTCGGTGT+CGG | - | chr7.1:16753597-16753616 | None:intergenic | 55.0% |
| ACCGGGACACGTCTAATCCG+AGG | - | chr7.1:16753556-16753575 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16753139 | 16754764 | 16753139 | ID=MS.gene38815 |
| chr7.1 | mRNA | 16753139 | 16754764 | 16753139 | ID=MS.gene38815.t1;Parent=MS.gene38815 |
| chr7.1 | exon | 16753139 | 16753515 | 16753139 | ID=MS.gene38815.t1.exon1;Parent=MS.gene38815.t1 |
| chr7.1 | CDS | 16753139 | 16753515 | 16753139 | ID=cds.MS.gene38815.t1;Parent=MS.gene38815.t1 |
| chr7.1 | exon | 16753766 | 16754093 | 16753766 | ID=MS.gene38815.t1.exon2;Parent=MS.gene38815.t1 |
| chr7.1 | CDS | 16753766 | 16754093 | 16753766 | ID=cds.MS.gene38815.t1;Parent=MS.gene38815.t1 |
| chr7.1 | exon | 16754498 | 16754764 | 16754498 | ID=MS.gene38815.t1.exon3;Parent=MS.gene38815.t1 |
| chr7.1 | CDS | 16754498 | 16754764 | 16754498 | ID=cds.MS.gene38815.t1;Parent=MS.gene38815.t1 |
| Gene Sequence |
| Protein sequence |
