Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38969.t1 | AFK39115.1 | 87.4 | 206 | 22 | 2 | 1 | 204 | 1 | 204 | 1.10E-95 | 359.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38969.t1 | Q0DC89 | 84.7 | 124 | 19 | 0 | 78 | 201 | 88 | 211 | 4.8e-63 | 242.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38969.t1 | I3SN78 | 87.4 | 206 | 22 | 2 | 1 | 204 | 1 | 204 | 8.1e-96 | 359.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027087 | MS.gene38969 | PPI |
| MS.gene30166 | MS.gene38969 | PPI |
| MS.gene82727 | MS.gene38969 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38969.t1 | MTR_8g461030 | 95.312 | 192 | 7 | 1 | 13 | 204 | 15 | 204 | 6.19e-128 | 358 |
| MS.gene38969.t1 | MTR_4g092800 | 46.400 | 125 | 62 | 2 | 80 | 202 | 65 | 186 | 1.07e-34 | 121 |
| MS.gene38969.t1 | MTR_2g020930 | 44.000 | 125 | 65 | 2 | 80 | 202 | 11 | 132 | 1.31e-31 | 112 |
| MS.gene38969.t1 | MTR_2g020950 | 40.650 | 123 | 68 | 2 | 82 | 202 | 12 | 131 | 4.05e-27 | 100 |
| MS.gene38969.t1 | MTR_2g020900 | 35.075 | 134 | 75 | 4 | 76 | 202 | 14 | 142 | 5.55e-19 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38969.t1 | AT1G53670 | 79.365 | 126 | 26 | 0 | 75 | 200 | 69 | 194 | 1.38e-79 | 236 |
| MS.gene38969.t1 | AT1G53670 | 74.603 | 126 | 25 | 1 | 75 | 200 | 69 | 187 | 9.22e-73 | 219 |
| MS.gene38969.t1 | AT4G04800 | 44.800 | 125 | 64 | 2 | 80 | 202 | 50 | 171 | 8.25e-34 | 119 |
| MS.gene38969.t1 | AT4G21840 | 45.082 | 122 | 62 | 2 | 81 | 200 | 18 | 136 | 9.13e-32 | 112 |
| MS.gene38969.t1 | AT4G04830 | 41.732 | 127 | 69 | 2 | 80 | 204 | 11 | 134 | 9.79e-32 | 112 |
| MS.gene38969.t1 | AT4G21830 | 45.082 | 122 | 62 | 2 | 81 | 200 | 16 | 134 | 1.03e-31 | 112 |
| MS.gene38969.t1 | AT4G21860 | 41.304 | 138 | 76 | 2 | 67 | 202 | 63 | 197 | 1.60e-31 | 114 |
| MS.gene38969.t1 | AT4G21860 | 41.304 | 138 | 76 | 2 | 67 | 202 | 63 | 197 | 1.60e-31 | 114 |
| MS.gene38969.t1 | AT4G21860 | 41.304 | 138 | 76 | 2 | 67 | 202 | 63 | 197 | 1.60e-31 | 114 |
| MS.gene38969.t1 | AT4G21830 | 45.082 | 122 | 62 | 2 | 81 | 200 | 19 | 137 | 2.33e-31 | 112 |
| MS.gene38969.t1 | AT4G21850 | 40.426 | 141 | 76 | 3 | 62 | 200 | 3 | 137 | 2.92e-30 | 108 |
| MS.gene38969.t1 | AT4G04810 | 40.945 | 127 | 70 | 2 | 80 | 204 | 11 | 134 | 4.35e-29 | 105 |
| MS.gene38969.t1 | AT4G04840 | 39.837 | 123 | 69 | 3 | 80 | 200 | 27 | 146 | 7.30e-29 | 105 |
| MS.gene38969.t1 | AT4G04830 | 37.008 | 127 | 65 | 3 | 80 | 204 | 11 | 124 | 1.24e-23 | 91.7 |
| MS.gene38969.t1 | AT4G21860 | 44.872 | 78 | 43 | 0 | 67 | 144 | 63 | 140 | 1.66e-18 | 79.7 |
| MS.gene38969.t1 | AT4G21850 | 39.604 | 101 | 57 | 2 | 62 | 161 | 3 | 100 | 2.52e-18 | 77.4 |
| MS.gene38969.t1 | AT4G04810 | 46.970 | 66 | 35 | 0 | 80 | 145 | 11 | 76 | 1.27e-16 | 72.8 |
Find 39 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATCAAATTTATGAATT+TGG | 0.058456 | 8.4:-49187724 | None:intergenic |
| GGAATCAAATTTATGAATTT+GGG | 0.252355 | 8.4:-49187723 | None:intergenic |
| ACTTCCTTGGTTTGAGCTTA+AGG | 0.254966 | 8.4:-49192326 | None:intergenic |
| TTCTGTGGTGTTTGAGTTGT+TGG | 0.282468 | 8.4:-49187846 | None:intergenic |
| CTTCCTTGGTTTGAGCTTAA+GGG | 0.347472 | 8.4:-49192325 | None:intergenic |
| CAAAACTTTCTTCTTCAATC+CGG | 0.365281 | 8.4:+49187795 | MS.gene38969:CDS |
| AAATTTATGAATTTGGGTAT+TGG | 0.369121 | 8.4:-49187717 | None:intergenic |
| ATGGTAAGTCCCTTCAGTTT+TGG | 0.402394 | 8.4:-49191827 | None:intergenic |
| TGATGGCCACAAGAAAAGTT+TGG | 0.411801 | 8.4:-49187744 | None:intergenic |
| ACCAAGTTTAATAGTGGAAC+TGG | 0.412251 | 8.4:+49192040 | MS.gene38969:CDS |
| TTCTTCTTCAATCCGGGCAA+TGG | 0.414773 | 8.4:+49187802 | MS.gene38969:CDS |
| ATTTGACTATCTTACTTCCT+TGG | 0.431236 | 8.4:-49192339 | None:intergenic |
| CCATCTTATTACCAGCCAAT+TGG | 0.432412 | 8.4:+49192067 | MS.gene38969:CDS |
| AAAAGTACTTACTCAAATAA+GGG | 0.438375 | 8.4:-49191868 | None:intergenic |
| TCTTCTTCAATCCGGGCAAT+GGG | 0.438605 | 8.4:+49187803 | MS.gene38969:CDS |
| AAACAGCACAGAGAACTTCT+TGG | 0.444117 | 8.4:-49192138 | None:intergenic |
| AAAACTTTCTTCTTCAATCC+GGG | 0.449837 | 8.4:+49187796 | MS.gene38969:CDS |
| AATCTTTAAGTGATGAAGAA+TGG | 0.463954 | 8.4:+49189341 | MS.gene38969:CDS |
| GAAAACGTTACTGTATCAAC+AGG | 0.465505 | 8.4:+49192209 | MS.gene38969:CDS |
| CCAATTGGCTGGTAATAAGA+TGG | 0.475719 | 8.4:-49192067 | None:intergenic |
| GAATTTGCGCAGCAGCTGAT+AGG | 0.478954 | 8.4:-49187691 | None:intergenic |
| TCATCTACCAAGTTTAATAG+TGG | 0.496314 | 8.4:+49192034 | MS.gene38969:CDS |
| ACCAGTTCCACTATTAAACT+TGG | 0.499953 | 8.4:-49192041 | None:intergenic |
| GGAACTGAGAGAGCTTTCAC+TGG | 0.500884 | 8.4:+49189409 | MS.gene38969:CDS |
| AACACCACAGAAATTCAATC+AGG | 0.516707 | 8.4:+49187857 | MS.gene38969:CDS |
| AGCACAGAGAACTTCTTGGC+GGG | 0.521065 | 8.4:-49192134 | None:intergenic |
| GATGATGGCCCTCCACCCAC+AGG | 0.547765 | 8.4:+49192187 | MS.gene38969:CDS |
| TACTGGAATACCAAAACTGA+AGG | 0.552699 | 8.4:+49191817 | MS.gene38969:CDS |
| GCTGTTTGTGATGCTCATCT+CGG | 0.566492 | 8.4:+49192154 | MS.gene38969:CDS |
| AAGCTGAAGAACCCATTGCC+CGG | 0.571700 | 8.4:-49187814 | None:intergenic |
| AGTTTAATAGTGGAACTGGT+TGG | 0.589954 | 8.4:+49192044 | MS.gene38969:CDS |
| CAGCACAGAGAACTTCTTGG+CGG | 0.609123 | 8.4:-49192135 | None:intergenic |
| GCACAGAGAACTTCTTGGCG+GGG | 0.624274 | 8.4:-49192133 | None:intergenic |
| GTGTGTCACAACATATGCAA+TGG | 0.629248 | 8.4:-49191846 | None:intergenic |
| GTATGCAATTGCAAACGTGA+TGG | 0.643929 | 8.4:-49187761 | None:intergenic |
| CTTCCCTTAAGCTCAAACCA+AGG | 0.648370 | 8.4:+49192322 | MS.gene38969:CDS |
| ATAACCTGATTGAATTTCTG+TGG | 0.652531 | 8.4:-49187861 | None:intergenic |
| ACTGGAATACCAAAACTGAA+GGG | 0.657265 | 8.4:+49191818 | MS.gene38969:CDS |
| GAACTGAGAGAGCTTTCACT+GGG | 0.658532 | 8.4:+49189410 | MS.gene38969:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTTTATCAAATTATTA+CGG | + | chr8.4:49189566-49189585 | MS.gene38969:intron | 10.0% |
| !!! | TCGATAAATTTTAATTAAAT+AGG | - | chr8.4:49189702-49189721 | None:intergenic | 10.0% |
| !!! | TCTAAAATGAATTAAAAAAA+CGG | - | chr8.4:49191794-49191813 | None:intergenic | 10.0% |
| !! | AATTATGTAATAATTGTTAG+CGG | - | chr8.4:49191283-49191302 | None:intergenic | 15.0% |
| !! | ATTTAAGTATTAAGTTATGT+TGG | - | chr8.4:49188002-49188021 | None:intergenic | 15.0% |
| !! | CCTTTAATGTAAAATAAATT+TGG | - | chr8.4:49189743-49189762 | None:intergenic | 15.0% |
| !! | TTCAGAAGAAAAAAAATATA+CGG | + | chr8.4:49189147-49189166 | MS.gene38969:intron | 15.0% |
| !!! | CCAAATTTATTTTACATTAA+AGG | + | chr8.4:49189740-49189759 | MS.gene38969:intron | 15.0% |
| !!! | TGTATCAAGATTTTTATATT+GGG | - | chr8.4:49191557-49191576 | None:intergenic | 15.0% |
| !! | AAAATGAAAATAGGAGAAAT+TGG | + | chr8.4:49188463-49188482 | MS.gene38969:intron | 20.0% |
| !! | AAATTGATTATTCAATTTGC+TGG | + | chr8.4:49188342-49188361 | MS.gene38969:intron | 20.0% |
| !! | AAATTTATGAATTTGGGTAT+TGG | - | chr8.4:49187720-49187739 | None:intergenic | 20.0% |
| !! | AATTTCTAAATTTGTAAGAG+CGG | - | chr8.4:49188327-49188346 | None:intergenic | 20.0% |
| !! | AGAATAGTTTATAAATCATC+GGG | - | chr8.4:49190708-49190727 | None:intergenic | 20.0% |
| !! | GAGAATAGTTTATAAATCAT+CGG | - | chr8.4:49190709-49190728 | None:intergenic | 20.0% |
| !! | GGAATCAAATTTATGAATTT+GGG | - | chr8.4:49187726-49187745 | None:intergenic | 20.0% |
| !! | TAAATAAATACCACAATATC+AGG | - | chr8.4:49191955-49191974 | None:intergenic | 20.0% |
| !! | TGAAAAAAGTTTATAAAGAG+AGG | + | chr8.4:49191480-49191499 | MS.gene38969:intron | 20.0% |
| !! | TGGAATCAAATTTATGAATT+TGG | - | chr8.4:49187727-49187746 | None:intergenic | 20.0% |
| !! | TTAATAAGTTCAAGATGATT+CGG | - | chr8.4:49191994-49192013 | None:intergenic | 20.0% |
| !! | TTCTATATTTAAAAGAGGAA+AGG | + | chr8.4:49191454-49191473 | MS.gene38969:intron | 20.0% |
| !!! | AAAAAGTACTTACTCAAATA+AGG | - | chr8.4:49191872-49191891 | None:intergenic | 20.0% |
| !!! | AAAAGTACTTACTCAAATAA+GGG | - | chr8.4:49191871-49191890 | None:intergenic | 20.0% |
| !!! | ATATTTTGATAGAAACAAAC+TGG | + | chr8.4:49188020-49188039 | MS.gene38969:intron | 20.0% |
| !!! | ATGAACAATTTTATGTTACT+CGG | + | chr8.4:49189380-49189399 | MS.gene38969:CDS | 20.0% |
| !!! | CTCTTTTAAATATAGAACTT+GGG | - | chr8.4:49191451-49191470 | None:intergenic | 20.0% |
| !!! | GTGTATCAAGATTTTTATAT+TGG | - | chr8.4:49191558-49191577 | None:intergenic | 20.0% |
| !!! | TTATTTTACATTAAAGGACA+TGG | + | chr8.4:49189746-49189765 | MS.gene38969:intron | 20.0% |
| !!! | TTTTTTTTCTTCTTCTGATA+GGG | + | chr8.4:49189277-49189296 | MS.gene38969:intron | 20.0% |
| !!! | TTTTTTTTTCTTCTTCTGAT+AGG | + | chr8.4:49189276-49189295 | MS.gene38969:intron | 20.0% |
| ! | AAATACATTTAACGTGTAGA+GGG | + | chr8.4:49188984-49189003 | MS.gene38969:intron | 25.0% |
| ! | AATCTTTAAGTGATGAAGAA+TGG | + | chr8.4:49189341-49189360 | MS.gene38969:CDS | 25.0% |
| ! | ACACCCGAATAAATATTATT+AGG | + | chr8.4:49188165-49188184 | MS.gene38969:intron | 25.0% |
| ! | AGAAGAAGAAAAAAATATCG+TGG | + | chr8.4:49188062-49188081 | MS.gene38969:intron | 25.0% |
| ! | ATCCTTATATCTTTCATTTC+AGG | - | chr8.4:49191360-49191379 | None:intergenic | 25.0% |
| ! | ATTTCTAAATTTGTAAGAGC+GGG | - | chr8.4:49188326-49188345 | None:intergenic | 25.0% |
| ! | CACAAAATTGTACAAGAAAA+TGG | + | chr8.4:49188392-49188411 | MS.gene38969:intron | 25.0% |
| ! | CCAAGTTCTATATTTAAAAG+AGG | + | chr8.4:49191449-49191468 | MS.gene38969:intron | 25.0% |
| ! | CGAATAAATATTATTAGGAG+CGG | + | chr8.4:49188170-49188189 | MS.gene38969:intron | 25.0% |
| ! | CGCTCCTAATAATATTTATT+CGG | - | chr8.4:49188172-49188191 | None:intergenic | 25.0% |
| ! | CTTGAGAATAGTTTATAAAG+AGG | - | chr8.4:49191215-49191234 | None:intergenic | 25.0% |
| ! | GAAGAAGAAAAAAATATCGT+GGG | + | chr8.4:49188063-49188082 | MS.gene38969:intron | 25.0% |
| ! | GAATAAATATTATTAGGAGC+GGG | + | chr8.4:49188171-49188190 | MS.gene38969:intron | 25.0% |
| ! | GCTCCTAATAATATTTATTC+GGG | - | chr8.4:49188171-49188190 | None:intergenic | 25.0% |
| ! | GTGATATATTAGTGATATTG+TGG | + | chr8.4:49191702-49191721 | MS.gene38969:intron | 25.0% |
| ! | TAATAAGTTCAAGATGATTC+GGG | - | chr8.4:49191993-49192012 | None:intergenic | 25.0% |
| ! | TACCTGAAATGAAAGATATA+AGG | + | chr8.4:49191355-49191374 | MS.gene38969:intron | 25.0% |
| ! | TCTACACGTTAAATGTATTT+CGG | - | chr8.4:49188984-49189003 | None:intergenic | 25.0% |
| ! | TTAAATAGGCCTAAAAATGA+AGG | - | chr8.4:49189688-49189707 | None:intergenic | 25.0% |
| !! | AAACTTCCATCTTTTAAATG+CGG | - | chr8.4:49189832-49189851 | None:intergenic | 25.0% |
| !! | AAAGAATCACTTGTTGAATT+GGG | + | chr8.4:49192233-49192252 | MS.gene38969:intron | 25.0% |
| !! | ATTTTATGTTACTCGGAAAA+AGG | + | chr8.4:49189387-49189406 | MS.gene38969:CDS | 25.0% |
| !! | CCTCTTTTAAATATAGAACT+TGG | - | chr8.4:49191452-49191471 | None:intergenic | 25.0% |
| !! | GATTTCACATTTTTACCAAT+TGG | - | chr8.4:49192085-49192104 | None:intergenic | 25.0% |
| !! | GTAAAATAAATTTGGTGAAC+TGG | - | chr8.4:49189735-49189754 | None:intergenic | 25.0% |
| !! | TAAAGAATCACTTGTTGAAT+TGG | + | chr8.4:49192232-49192251 | MS.gene38969:intron | 25.0% |
| !! | TTGTATGTTGGTTATAAAGT+TGG | + | chr8.4:49188829-49188848 | MS.gene38969:intron | 25.0% |
| !! | TTTTATGTTACTCGGAAAAA+GGG | + | chr8.4:49189388-49189407 | MS.gene38969:CDS | 25.0% |
| !!! | ACTAACTTTCCTTCATTTTT+AGG | + | chr8.4:49189676-49189695 | MS.gene38969:intron | 25.0% |
| !!! | GTCTAAAAGTTTGTTTGTTT+TGG | + | chr8.4:49192286-49192305 | MS.gene38969:intron | 25.0% |
| !!! | TAATTCATTTTAGAGAGTAC+TGG | + | chr8.4:49191800-49191819 | MS.gene38969:intron | 25.0% |
| AAAACTTTCTTCTTCAATCC+GGG | + | chr8.4:49187796-49187815 | MS.gene38969:CDS | 30.0% | |
| AATACATTTAACGTGTAGAG+GGG | + | chr8.4:49188985-49189004 | MS.gene38969:intron | 30.0% | |
| AATTGTACAAGAAAATGGTG+AGG | + | chr8.4:49188397-49188416 | MS.gene38969:intron | 30.0% | |
| ATAACCTGATTGAATTTCTG+TGG | - | chr8.4:49187864-49187883 | None:intergenic | 30.0% | |
| ATTAAACTTGGTAGATGATC+TGG | - | chr8.4:49192032-49192051 | None:intergenic | 30.0% | |
| ATTGTACAAGAAAATGGTGA+GGG | + | chr8.4:49188398-49188417 | MS.gene38969:intron | 30.0% | |
| CAAAACTTTCTTCTTCAATC+CGG | + | chr8.4:49187795-49187814 | MS.gene38969:CDS | 30.0% | |
| CACAAATGGAGTTACATTAA+AGG | + | chr8.4:49190295-49190314 | MS.gene38969:intron | 30.0% | |
| GAAATACATTTAACGTGTAG+AGG | + | chr8.4:49188983-49189002 | MS.gene38969:intron | 30.0% | |
| GAACAGCTATACTTACTTAA+CGG | + | chr8.4:49188088-49188107 | MS.gene38969:intron | 30.0% | |
| GAGAATAGTTTATAAAGAGG+AGG | - | chr8.4:49191212-49191231 | None:intergenic | 30.0% | |
| GCTGAAGTGAAAATGAAAAT+AGG | + | chr8.4:49188454-49188473 | MS.gene38969:intron | 30.0% | |
| TATCAAATTATTACGGACCT+TGG | + | chr8.4:49189573-49189592 | MS.gene38969:intron | 30.0% | |
| TCATCTACCAAGTTTAATAG+TGG | + | chr8.4:49192034-49192053 | MS.gene38969:CDS | 30.0% | |
| ! | TAGAGTACCTGAATCATATA+TGG | - | chr8.4:49191626-49191645 | None:intergenic | 30.0% |
| ! | TATGTTGGTTATAAAGTTGG+TGG | + | chr8.4:49188832-49188851 | MS.gene38969:intron | 30.0% |
| ! | TTGAATGACCATTGTTTTCA+AGG | + | chr8.4:49188263-49188282 | MS.gene38969:intron | 30.0% |
| ! | TTGATTCCAAACTTTTCTTG+TGG | + | chr8.4:49187738-49187757 | MS.gene38969:CDS | 30.0% |
| !! | AGTTTACTTTTGTACCATGT+TGG | + | chr8.4:49191670-49191689 | MS.gene38969:intron | 30.0% |
| !! | TAATGCTTGCTGTTTAAAGT+TGG | + | chr8.4:49188936-49188955 | MS.gene38969:intron | 30.0% |
| !! | TGGTTTAGTTTGTTCACAAA+TGG | + | chr8.4:49190281-49190300 | MS.gene38969:intron | 30.0% |
| !!! | GAAGAAGAAAGTTTTGTTGT+GGG | - | chr8.4:49187791-49187810 | None:intergenic | 30.0% |
| !!! | TATTCAATTTGCTGGCTTTT+TGG | + | chr8.4:49188350-49188369 | MS.gene38969:intron | 30.0% |
| !!! | TGAAGAAGAAAGTTTTGTTG+TGG | - | chr8.4:49187792-49187811 | None:intergenic | 30.0% |
| AACACCACAGAAATTCAATC+AGG | + | chr8.4:49187857-49187876 | MS.gene38969:CDS | 35.0% | |
| ACATCGGATAGATGATAGAT+AGG | - | chr8.4:49190738-49190757 | None:intergenic | 35.0% | |
| ACCAGTTCCACTATTAAACT+TGG | - | chr8.4:49192044-49192063 | None:intergenic | 35.0% | |
| ACTCTTCAGACACAACATTA+AGG | - | chr8.4:49188504-49188523 | None:intergenic | 35.0% | |
| ACTGGAATACCAAAACTGAA+GGG | + | chr8.4:49191818-49191837 | MS.gene38969:CDS | 35.0% | |
| AGAATCCTATCTATCTGATG+TGG | + | chr8.4:49191233-49191252 | MS.gene38969:intron | 35.0% | |
| AGACAAATGTGAGCTTATAC+AGG | - | chr8.4:49192270-49192289 | None:intergenic | 35.0% | |
| ATACCATGTAACGAATATCG+AGG | + | chr8.4:49191144-49191163 | MS.gene38969:intron | 35.0% | |
| ATCTATCATCTATCCGATGT+GGG | + | chr8.4:49190738-49190757 | MS.gene38969:intron | 35.0% | |
| CAAACAAAGTACAAGCGAAT+AGG | - | chr8.4:49191917-49191936 | None:intergenic | 35.0% | |
| CCATTAATAACTCTGCTTGT+AGG | + | chr8.4:49188194-49188213 | MS.gene38969:intron | 35.0% | |
| CCTACAAGCAGAGTTATTAA+TGG | - | chr8.4:49188197-49188216 | None:intergenic | 35.0% | |
| CTCTTCAGACACAACATTAA+GGG | - | chr8.4:49188503-49188522 | None:intergenic | 35.0% | |
| GAAAACGTTACTGTATCAAC+AGG | + | chr8.4:49192209-49192228 | MS.gene38969:CDS | 35.0% | |
| GAATCCTATCTATCTGATGT+GGG | + | chr8.4:49191234-49191253 | MS.gene38969:intron | 35.0% | |
| GTACTAAGTACCTGATATTG+TGG | + | chr8.4:49191942-49191961 | MS.gene38969:intron | 35.0% | |
| TAACCAACATACAACTCTTC+AGG | - | chr8.4:49188823-49188842 | None:intergenic | 35.0% | |
| TACTGGAATACCAAAACTGA+AGG | + | chr8.4:49191817-49191836 | MS.gene38969:CDS | 35.0% | |
| TATCTATCATCTATCCGATG+TGG | + | chr8.4:49190737-49190756 | MS.gene38969:intron | 35.0% | |
| TGATATTGTGGTATGATTGC+TGG | + | chr8.4:49191714-49191733 | MS.gene38969:intron | 35.0% | |
| TGGAGTTACATTAAAGGACA+TGG | + | chr8.4:49190301-49190320 | MS.gene38969:intron | 35.0% | |
| TGTTCATTGTATTTCGCTTG+TGG | + | chr8.4:49191328-49191347 | MS.gene38969:intron | 35.0% | |
| TTGATGCCGCATTTAAAAGA+TGG | + | chr8.4:49189823-49189842 | MS.gene38969:intron | 35.0% | |
| TTGTGTTCAGTGTTCACAAA+TGG | + | chr8.4:49190560-49190579 | MS.gene38969:intron | 35.0% | |
| ! | ACCAAGTTTAATAGTGGAAC+TGG | + | chr8.4:49192040-49192059 | MS.gene38969:CDS | 35.0% |
| ! | AGTTTAATAGTGGAACTGGT+TGG | + | chr8.4:49192044-49192063 | MS.gene38969:CDS | 35.0% |
| ! | ATACAGTAACGTTTTCCTGT+GGG | - | chr8.4:49192205-49192224 | None:intergenic | 35.0% |
| ! | TCACATTTTTACCAATTGGC+TGG | - | chr8.4:49192081-49192100 | None:intergenic | 35.0% |
| ! | TTGGTGTCCATATATGATTC+AGG | + | chr8.4:49191616-49191635 | MS.gene38969:intron | 35.0% |
| ! | TTTTCTTCTTCTGATAGGGA+TGG | + | chr8.4:49189281-49189300 | MS.gene38969:intron | 35.0% |
| !! | ATCACTTTAGAGTACCAACA+TGG | - | chr8.4:49191687-49191706 | None:intergenic | 35.0% |
| !! | CTTGCTGTTTAAAGTTGGTT+GGG | + | chr8.4:49188941-49188960 | MS.gene38969:intron | 35.0% |
| !!! | AGAAAGTTTTGTTGTGGGTT+TGG | - | chr8.4:49187786-49187805 | None:intergenic | 35.0% |
| !!! | CTCTATGCTATTTTCAGTGA+TGG | + | chr8.4:49189033-49189052 | MS.gene38969:intron | 35.0% |
| AAACAGCACAGAGAACTTCT+TGG | - | chr8.4:49192141-49192160 | None:intergenic | 40.0% | |
| AACTCTGCTTGTAGGTGTAT+GGG | + | chr8.4:49188202-49188221 | MS.gene38969:intron | 40.0% | |
| AATGGAGTAGTAGCTACTTC+TGG | + | chr8.4:49190261-49190280 | MS.gene38969:intron | 40.0% | |
| ACAAGCAAGTCAAAAAGCCA+TGG | - | chr8.4:49189645-49189664 | None:intergenic | 40.0% | |
| ACCAACACAGACATAGACAA+CGG | - | chr8.4:49189607-49189626 | None:intergenic | 40.0% | |
| ATAGAGATAAACACCTGCAG+TGG | + | chr8.4:49189235-49189254 | MS.gene38969:intron | 40.0% | |
| ATTACCAGAGCCATTTCCTT+GGG | + | chr8.4:49188122-49188141 | MS.gene38969:intron | 40.0% | |
| ATTGAGGTTAAGTCATCACC+TGG | + | chr8.4:49188732-49188751 | MS.gene38969:intron | 40.0% | |
| CAAATTATTACGGACCTTGG+TGG | + | chr8.4:49189576-49189595 | MS.gene38969:intron | 40.0% | |
| CACACAGTTGTGTTCACAAA+TGG | + | chr8.4:49190243-49190262 | MS.gene38969:intron | 40.0% | |
| CACACTTCTGCAACAGATTT+GGG | - | chr8.4:49188621-49188640 | None:intergenic | 40.0% | |
| CCAATTGGCTGGTAATAAGA+TGG | - | chr8.4:49192070-49192089 | None:intergenic | 40.0% | |
| CCATCTTATTACCAGCCAAT+TGG | + | chr8.4:49192067-49192086 | MS.gene38969:CDS | 40.0% | |
| CTTACTTAACGGTTGAACTC+AGG | + | chr8.4:49188099-49188118 | MS.gene38969:intron | 40.0% | |
| GAACACAACTGCAATCAATG+AGG | - | chr8.4:49189862-49189881 | None:intergenic | 40.0% | |
| GCCTTTCAATTCTTCCAAGT+CGG | + | chr8.4:49191511-49191530 | MS.gene38969:intron | 40.0% | |
| GTATGATGTCCATTGGTCAA+TGG | - | chr8.4:49190628-49190647 | None:intergenic | 40.0% | |
| GTATGCAATTGCAAACGTGA+TGG | - | chr8.4:49187764-49187783 | None:intergenic | 40.0% | |
| GTGTGTCACAACATATGCAA+TGG | - | chr8.4:49191849-49191868 | None:intergenic | 40.0% | |
| TAACTCTGCTTGTAGGTGTA+TGG | + | chr8.4:49188201-49188220 | MS.gene38969:intron | 40.0% | |
| TAATACACTAGACCAAGCAC+AGG | - | chr8.4:49189100-49189119 | None:intergenic | 40.0% | |
| TACATGGTATCAGAGCCTAT+CGG | - | chr8.4:49191134-49191153 | None:intergenic | 40.0% | |
| TAGTCCCACATCAGATAGAT+AGG | - | chr8.4:49191241-49191260 | None:intergenic | 40.0% | |
| TCGCAGAACCTTGAAAACAA+TGG | - | chr8.4:49188274-49188293 | None:intergenic | 40.0% | |
| TCTAAATTTGTAAGAGCGGG+TGG | - | chr8.4:49188323-49188342 | None:intergenic | 40.0% | |
| TGAAGGCTCAATGTTGAGAT+TGG | + | chr8.4:49188779-49188798 | MS.gene38969:intron | 40.0% | |
| TGATGGCCACAAGAAAAGTT+TGG | - | chr8.4:49187747-49187766 | None:intergenic | 40.0% | |
| TTTCAGTGATGGTAGTAGCA+AGG | + | chr8.4:49189044-49189063 | MS.gene38969:intron | 40.0% | |
| ! | ACTTCCTTGGTTTGAGCTTA+AGG | - | chr8.4:49192329-49192348 | None:intergenic | 40.0% |
| ! | ATGGTAAGTCCCTTCAGTTT+TGG | - | chr8.4:49191830-49191849 | None:intergenic | 40.0% |
| ! | CAAATCTGTTGCAGAAGTGT+GGG | + | chr8.4:49188620-49188639 | MS.gene38969:intron | 40.0% |
| ! | CACTGGGTGAGTTTAAGATT+GGG | + | chr8.4:49189426-49189445 | MS.gene38969:intron | 40.0% |
| ! | CTCGGACACATTTTTGATGA+TGG | + | chr8.4:49192172-49192191 | MS.gene38969:CDS | 40.0% |
| ! | CTTCCTTGGTTTGAGCTTAA+GGG | - | chr8.4:49192328-49192347 | None:intergenic | 40.0% |
| ! | GATACAGTAACGTTTTCCTG+TGG | - | chr8.4:49192206-49192225 | None:intergenic | 40.0% |
| ! | TCACTGGGTGAGTTTAAGAT+TGG | + | chr8.4:49189425-49189444 | MS.gene38969:intron | 40.0% |
| ! | TTGGAGTGGCAAATTGCTTT+TGG | + | chr8.4:49188690-49188709 | MS.gene38969:intron | 40.0% |
| ! | TTTTGCCGTGTAGTGTGTAT+TGG | + | chr8.4:49188537-49188556 | MS.gene38969:intron | 40.0% |
| !! | ACCGACTTGGAAGAATTGAA+AGG | - | chr8.4:49191515-49191534 | None:intergenic | 40.0% |
| !! | ATTGTTTTCAAGGTTCTGCG+AGG | + | chr8.4:49188273-49188292 | MS.gene38969:intron | 40.0% |
| !! | GCTTGCTGTTTAAAGTTGGT+TGG | + | chr8.4:49188940-49188959 | MS.gene38969:intron | 40.0% |
| !! | GTGCACTTGGCTTTAATACT+TGG | + | chr8.4:49191597-49191616 | MS.gene38969:intron | 40.0% |
| !! | TCTTCCAAGTCGGTTTTGTA+AGG | + | chr8.4:49191521-49191540 | MS.gene38969:intron | 40.0% |
| !! | TTCTGTGGTGTTTGAGTTGT+TGG | - | chr8.4:49187849-49187868 | None:intergenic | 40.0% |
| !!! | AATTTGCTGGCTTTTTGGAG+TGG | + | chr8.4:49188355-49188374 | MS.gene38969:intron | 40.0% |
| AACTATGGCTTCGCATGAGA+TGG | + | chr8.4:49188654-49188673 | MS.gene38969:intron | 45.0% | |
| AAGCCATGGTAACACGACTT+CGG | - | chr8.4:49189631-49189650 | None:intergenic | 45.0% | |
| AATTGTTAGCGGCCAACACT+CGG | - | chr8.4:49191272-49191291 | None:intergenic | 45.0% | |
| ACAACTCTTCAGGTCCATGA+TGG | - | chr8.4:49188813-49188832 | None:intergenic | 45.0% | |
| ACATGGTATCAGAGCCTATC+GGG | - | chr8.4:49191133-49191152 | None:intergenic | 45.0% | |
| ACATTTAACGTGTAGAGGGG+TGG | + | chr8.4:49188988-49189007 | MS.gene38969:intron | 45.0% | |
| ACTAAATCCCATCCGAGTGT+TGG | + | chr8.4:49190761-49190780 | MS.gene38969:intron | 45.0% | |
| ACTCTGCTTGTAGGTGTATG+GGG | + | chr8.4:49188203-49188222 | MS.gene38969:intron | 45.0% | |
| AGGCTCAATGTTGAGATTGG+TGG | + | chr8.4:49188782-49188801 | MS.gene38969:intron | 45.0% | |
| ATAAATCATCGGGTCCATCG+TGG | - | chr8.4:49190698-49190717 | None:intergenic | 45.0% | |
| CCAAATCTGTTGCAGAAGTG+TGG | + | chr8.4:49188619-49188638 | MS.gene38969:intron | 45.0% | |
| CCACACTTCTGCAACAGATT+TGG | - | chr8.4:49188622-49188641 | None:intergenic | 45.0% | |
| CGAACTCATCCCTACAAAAC+CGG | + | chr8.4:49191168-49191187 | MS.gene38969:intron | 45.0% | |
| CTCATGCGAAGCCATAGTTT+GGG | - | chr8.4:49188653-49188672 | None:intergenic | 45.0% | |
| CTTCCCTTAAGCTCAAACCA+AGG | + | chr8.4:49192322-49192341 | MS.gene38969:CDS | 45.0% | |
| GAACTGAGAGAGCTTTCACT+GGG | + | chr8.4:49189410-49189429 | MS.gene38969:CDS | 45.0% | |
| GAGTGGAATTAATAGGCGTG+GGG | + | chr8.4:49188906-49188925 | MS.gene38969:intron | 45.0% | |
| GATGGGATTTAGTCCCACAT+CGG | - | chr8.4:49190754-49190773 | None:intergenic | 45.0% | |
| GATTACCAGAGCCATTTCCT+TGG | + | chr8.4:49188121-49188140 | MS.gene38969:intron | 45.0% | |
| GCTATGTAGCAGCGACATTT+CGG | + | chr8.4:49189500-49189519 | MS.gene38969:intron | 45.0% | |
| GCTGTTTGTGATGCTCATCT+CGG | + | chr8.4:49192154-49192173 | MS.gene38969:CDS | 45.0% | |
| GGACCTGAAGAGTTGTATGT+TGG | + | chr8.4:49188817-49188836 | MS.gene38969:intron | 45.0% | |
| GGAGTGGAATTAATAGGCGT+GGG | + | chr8.4:49188905-49188924 | MS.gene38969:intron | 45.0% | |
| GGTGTTAAGTGTTAACCCTC+CGG | - | chr8.4:49188150-49188169 | None:intergenic | 45.0% | |
| GTGCTGAAGTTGTGTTACCA+TGG | + | chr8.4:49189987-49190006 | MS.gene38969:intron | 45.0% | |
| TAAATCATCGGGTCCATCGT+GGG | - | chr8.4:49190697-49190716 | None:intergenic | 45.0% | |
| TAGCTCTCACCATTGACCAA+TGG | + | chr8.4:49190616-49190635 | MS.gene38969:intron | 45.0% | |
| TCCGTTGTCTATGTCTGTGT+TGG | + | chr8.4:49189603-49189622 | MS.gene38969:intron | 45.0% | |
| TCGTCCTTACAAAACCGACT+TGG | - | chr8.4:49191528-49191547 | None:intergenic | 45.0% | |
| TCTCATGCGAAGCCATAGTT+TGG | - | chr8.4:49188654-49188673 | None:intergenic | 45.0% | |
| TCTTCTTCAATCCGGGCAAT+GGG | + | chr8.4:49187803-49187822 | MS.gene38969:CDS | 45.0% | |
| TGGAAGAATTGAAAGGCGAC+AGG | - | chr8.4:49191508-49191527 | None:intergenic | 45.0% | |
| TGGAGTGGAATTAATAGGCG+TGG | + | chr8.4:49188904-49188923 | MS.gene38969:intron | 45.0% | |
| TGGGAAGCTATCCCAAACTA+TGG | + | chr8.4:49188639-49188658 | MS.gene38969:intron | 45.0% | |
| TTCTTCTTCAATCCGGGCAA+TGG | + | chr8.4:49187802-49187821 | MS.gene38969:CDS | 45.0% | |
| ! | CGGACTGGAGTGGAATTAAT+AGG | + | chr8.4:49188899-49188918 | MS.gene38969:intron | 45.0% |
| ! | GATTGGTGGCTTAACCATCA+TGG | + | chr8.4:49188796-49188815 | MS.gene38969:intron | 45.0% |
| ! | TAAAAGCGTGTTCCCGTCTT+CGG | + | chr8.4:49188879-49188898 | MS.gene38969:intron | 45.0% |
| !! | CGGTTTTGTAGGGATGAGTT+CGG | - | chr8.4:49191170-49191189 | None:intergenic | 45.0% |
| !! | GAGTGGCAAATTGCTTTTGG+TGG | + | chr8.4:49188693-49188712 | MS.gene38969:intron | 45.0% |
| !! | GGCAAATTGCTTTTGGTGGA+GGG | + | chr8.4:49188697-49188716 | MS.gene38969:intron | 45.0% |
| !! | TGGATCTGTGCTGATTAGTG+CGG | + | chr8.4:49188752-49188771 | MS.gene38969:intron | 45.0% |
| !! | TGGCAAATTGCTTTTGGTGG+AGG | + | chr8.4:49188696-49188715 | MS.gene38969:intron | 45.0% |
| !! | TTGCTTTTGGTGGAGGGTTT+TGG | + | chr8.4:49188703-49188722 | MS.gene38969:intron | 45.0% |
| !!! | AGGGTTTTGGAGGGTTATTG+AGG | + | chr8.4:49188716-49188735 | MS.gene38969:intron | 45.0% |
| !!! | TTTTGGTGGAGGGTTTTGGA+GGG | + | chr8.4:49188707-49188726 | MS.gene38969:intron | 45.0% |
| !! | TTTATTTAATCAAATATATA+TGG | + | chr8.4:49191967-49191986 | MS.gene38969:intron | 5.0% |
| AAATCATCGGGTCCATCGTG+GGG | - | chr8.4:49190696-49190715 | None:intergenic | 50.0% | |
| AAGCTGAAGAACCCATTGCC+CGG | - | chr8.4:49187817-49187836 | None:intergenic | 50.0% | |
| ACCAAGCACAGGAGATGCAA+AGG | - | chr8.4:49189089-49189108 | None:intergenic | 50.0% | |
| ACGCTTTAGCCCAACCCAAT+GGG | + | chr8.4:49191074-49191093 | MS.gene38969:intron | 50.0% | |
| ACTAAATCCCACCCGAGTGT+TGG | + | chr8.4:49191257-49191276 | MS.gene38969:intron | 50.0% | |
| AGACAACGGACATACCACCA+AGG | - | chr8.4:49189593-49189612 | None:intergenic | 50.0% | |
| AGAGCCATTTCCTTGGGAAC+CGG | + | chr8.4:49188128-49188147 | MS.gene38969:intron | 50.0% | |
| AGATGGTGAAGGGGCTTACT+TGG | + | chr8.4:49188671-49188690 | MS.gene38969:intron | 50.0% | |
| AGCACAGAGAACTTCTTGGC+GGG | - | chr8.4:49192137-49192156 | None:intergenic | 50.0% | |
| ATTCCACTCCAGTCCGAAGA+CGG | - | chr8.4:49188895-49188914 | None:intergenic | 50.0% | |
| ATTGTTAGCGGCCAACACTC+GGG | - | chr8.4:49191271-49191290 | None:intergenic | 50.0% | |
| CACATCGGATAGATGTGAGG+GGG | - | chr8.4:49190864-49190883 | None:intergenic | 50.0% | |
| CAGCACAGAGAACTTCTTGG+CGG | - | chr8.4:49192138-49192157 | None:intergenic | 50.0% | |
| CCACATCGGATAGATGTGAG+GGG | - | chr8.4:49190865-49190884 | None:intergenic | 50.0% | |
| CCCACATCGGATAGATGTGA+GGG | - | chr8.4:49190866-49190885 | None:intergenic | 50.0% | |
| CCCTCACATCTATCCGATGT+GGG | + | chr8.4:49190863-49190882 | MS.gene38969:intron | 50.0% | |
| CCCTGCCAATACACACTACA+CGG | - | chr8.4:49188545-49188564 | None:intergenic | 50.0% | |
| CGGCCTCGATATTCGTTACA+TGG | - | chr8.4:49191150-49191169 | None:intergenic | 50.0% | |
| CTCTGCTTGTAGGTGTATGG+GGG | + | chr8.4:49188204-49188223 | MS.gene38969:intron | 50.0% | |
| CTGATTAGTGCGGCTCTTGA+AGG | + | chr8.4:49188762-49188781 | MS.gene38969:intron | 50.0% | |
| CTTCGCATGAGATGGTGAAG+GGG | + | chr8.4:49188662-49188681 | MS.gene38969:intron | 50.0% | |
| GAATTTGCGCAGCAGCTGAT+AGG | - | chr8.4:49187694-49187713 | None:intergenic | 50.0% | |
| GACCAATGGACATCATACCG+AGG | + | chr8.4:49190630-49190649 | MS.gene38969:intron | 50.0% | |
| GAGTCAGTTTCGTGTGCACT+TGG | + | chr8.4:49191584-49191603 | MS.gene38969:intron | 50.0% | |
| GCACTAATCAGCACAGATCC+AGG | - | chr8.4:49188753-49188772 | None:intergenic | 50.0% | |
| GCTTCGCATGAGATGGTGAA+GGG | + | chr8.4:49188661-49188680 | MS.gene38969:intron | 50.0% | |
| GGAACTGAGAGAGCTTTCAC+TGG | + | chr8.4:49189409-49189428 | MS.gene38969:CDS | 50.0% | |
| GGGGGTTGTGATGTTGACAA+AGG | + | chr8.4:49188223-49188242 | MS.gene38969:intron | 50.0% | |
| TCCCACATCGGATAGATGTG+AGG | - | chr8.4:49190867-49190886 | None:intergenic | 50.0% | |
| TCCTTTGCATCTCCTGTGCT+TGG | + | chr8.4:49189085-49189104 | MS.gene38969:intron | 50.0% | |
| TCTGCTTGTAGGTGTATGGG+GGG | + | chr8.4:49188205-49188224 | MS.gene38969:intron | 50.0% | |
| TTAAAGGACATGGCGCTGCA+TGG | + | chr8.4:49189756-49189775 | MS.gene38969:intron | 50.0% | |
| ! | AACGTTTTCCTGTGGGTGGA+GGG | - | chr8.4:49192198-49192217 | None:intergenic | 50.0% |
| ! | ATCTGCTGCAAAGTACCTCC+AGG | - | chr8.4:49188582-49188601 | None:intergenic | 50.0% |
| ! | CAGTAACGTTTTCCTGTGGG+TGG | - | chr8.4:49192202-49192221 | None:intergenic | 50.0% |
| ! | CCGTGTAGTGTGTATTGGCA+GGG | + | chr8.4:49188542-49188561 | MS.gene38969:intron | 50.0% |
| ! | GTAGTGTGTATTGGCAGGGT+GGG | + | chr8.4:49188546-49188565 | MS.gene38969:intron | 50.0% |
| ! | TAACGTTTTCCTGTGGGTGG+AGG | - | chr8.4:49192199-49192218 | None:intergenic | 50.0% |
| ! | TGTAGTGTGTATTGGCAGGG+TGG | + | chr8.4:49188545-49188564 | MS.gene38969:intron | 50.0% |
| !! | ACCGTACAAGCCGGTTTTGT+AGG | - | chr8.4:49191181-49191200 | None:intergenic | 50.0% |
| !! | CCCTACAAAACCGGCTTGTA+CGG | + | chr8.4:49191177-49191196 | MS.gene38969:intron | 50.0% |
| !! | CCGTACAAGCCGGTTTTGTA+GGG | - | chr8.4:49191180-49191199 | None:intergenic | 50.0% |
| !! | CTTTTGGTGGAGGGTTTTGG+AGG | + | chr8.4:49188706-49188725 | MS.gene38969:intron | 50.0% |
| !! | GTTTTCAAGGTTCTGCGAGG+CGG | + | chr8.4:49188276-49188295 | MS.gene38969:intron | 50.0% |
| !! | TGGAGGTACTTTGCAGCAGA+TGG | + | chr8.4:49188581-49188600 | MS.gene38969:intron | 50.0% |
| !!! | TTGCTGGCTTTTTGGAGTGG+AGG | + | chr8.4:49188358-49188377 | MS.gene38969:intron | 50.0% |
| AACCCAATGGGCCTAAAGCG+TGG | + | chr8.4:49191086-49191105 | MS.gene38969:intron | 55.0% | |
| ACGCTTTAGCCCAGCCCAAT+GGG | + | chr8.4:49190802-49190821 | MS.gene38969:intron | 55.0% | |
| AGAGCCTATCGGGTCCATCA+TGG | - | chr8.4:49191123-49191142 | None:intergenic | 55.0% | |
| AGCCTATCGGGTCCATCATG+GGG | - | chr8.4:49191121-49191140 | None:intergenic | 55.0% | |
| CAATGGGATGAGTTCGGCCT+CGG | - | chr8.4:49190650-49190669 | None:intergenic | 55.0% | |
| CACGCTTTAGCCCAACCCAA+TGG | + | chr8.4:49191073-49191092 | MS.gene38969:intron | 55.0% | |
| CAGGCCCAATGGGATGAGTT+CGG | - | chr8.4:49190656-49190675 | None:intergenic | 55.0% | |
| CCATTTCCTTGGGAACCGGA+GGG | + | chr8.4:49188132-49188151 | MS.gene38969:intron | 55.0% | |
| CCCCTCACATCTATCCGATG+TGG | + | chr8.4:49190862-49190881 | MS.gene38969:intron | 55.0% | |
| GAGCCTATCGGGTCCATCAT+GGG | - | chr8.4:49191122-49191141 | None:intergenic | 55.0% | |
| GAGGCCGAACTCATCCCATT+GGG | + | chr8.4:49190649-49190668 | MS.gene38969:intron | 55.0% | |
| GAGGCGGTTGTGGGTTTCTT+GGG | + | chr8.4:49188292-49188311 | MS.gene38969:intron | 55.0% | |
| GCAATCCTCACCGTACAAGC+CGG | - | chr8.4:49191190-49191209 | None:intergenic | 55.0% | |
| GCACAGAGAACTTCTTGGCG+GGG | - | chr8.4:49192136-49192155 | None:intergenic | 55.0% | |
| GGATGGTGTCTGTGCTTTGC+AGG | + | chr8.4:49189298-49189317 | MS.gene38969:intron | 55.0% | |
| GGCCTCGGTATGATGTCCAT+TGG | - | chr8.4:49190635-49190654 | None:intergenic | 55.0% | |
| GGCTTCGCATGAGATGGTGA+AGG | + | chr8.4:49188660-49188679 | MS.gene38969:intron | 55.0% | |
| GGCTTGCATCTCCACGCTTT+AGG | - | chr8.4:49191100-49191119 | None:intergenic | 55.0% | |
| GGTTCCCAAGGAAATGGCTC+TGG | - | chr8.4:49188129-49188148 | None:intergenic | 55.0% | |
| GTGAAGGGGCTTACTTGGAG+TGG | + | chr8.4:49188676-49188695 | MS.gene38969:intron | 55.0% | |
| GTGCCGAAGTCGTGTTACCA+TGG | + | chr8.4:49189625-49189644 | MS.gene38969:intron | 55.0% | |
| GTGTGTTAGCGGCCAACACT+CGG | - | chr8.4:49190776-49190795 | None:intergenic | 55.0% | |
| TGGAGATGCAAGCCCCATGA+TGG | + | chr8.4:49191106-49191125 | MS.gene38969:intron | 55.0% | |
| TGTTAACCCTCCGGTTCCCA+AGG | - | chr8.4:49188141-49188160 | None:intergenic | 55.0% | |
| TTAGCGGCCAACACTCGGAT+GGG | - | chr8.4:49190771-49190790 | None:intergenic | 55.0% | |
| TTCCACTCCAGTCCGAAGAC+GGG | - | chr8.4:49188894-49188913 | None:intergenic | 55.0% | |
| ! | ACGCTTTAGGCCCATTGGGT+TGG | - | chr8.4:49191087-49191106 | None:intergenic | 55.0% |
| ! | ATGTGAGGGGGTGTGTTAGC+GGG | - | chr8.4:49190852-49190871 | None:intergenic | 55.0% |
| ! | CGCTTTAGGCCCATTGGGTT+GGG | - | chr8.4:49191086-49191105 | None:intergenic | 55.0% |
| ! | CTCCACGCTTTAGGCCCATT+GGG | - | chr8.4:49191091-49191110 | None:intergenic | 55.0% |
| ! | GACACTGTATGTGCCACTGC+AGG | - | chr8.4:49189251-49189270 | None:intergenic | 55.0% |
| ! | GATGTGAGGGGGTGTGTTAG+CGG | - | chr8.4:49190853-49190872 | None:intergenic | 55.0% |
| ! | GCCGTGTAGTGTGTATTGGC+AGG | + | chr8.4:49188541-49188560 | MS.gene38969:intron | 55.0% |
| ! | TCTCCACGCTTTAGGCCCAT+TGG | - | chr8.4:49191092-49191111 | None:intergenic | 55.0% |
| ! | TGGGTTGGGCTAAAGCGTGA+GGG | - | chr8.4:49191072-49191091 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTACGGTG+AGG | + | chr8.4:49191182-49191201 | MS.gene38969:intron | 55.0% |
| !! | TTGGGTTGGGCTAAAGCGTG+AGG | - | chr8.4:49191073-49191092 | None:intergenic | 55.0% |
| AACGTGTAGAGGGGTGGTGC+TGG | + | chr8.4:49188994-49189013 | MS.gene38969:intron | 60.0% | |
| AAGGTTCTGCGAGGCGGTTG+TGG | + | chr8.4:49188282-49188301 | MS.gene38969:intron | 60.0% | |
| AGGACATGGCGCTGCATAGC+TGG | + | chr8.4:49190122-49190141 | MS.gene38969:intron | 60.0% | |
| AGGTTCTGCGAGGCGGTTGT+GGG | + | chr8.4:49188283-49188302 | MS.gene38969:intron | 60.0% | |
| ATCCCATTGGGCCTGAAGCG+TGG | + | chr8.4:49190661-49190680 | MS.gene38969:intron | 60.0% | |
| CACGCTTTAGCCCAGCCCAA+TGG | + | chr8.4:49190801-49190820 | MS.gene38969:intron | 60.0% | |
| CCCTCCGGTTCCCAAGGAAA+TGG | - | chr8.4:49188135-49188154 | None:intergenic | 60.0% | |
| CGAGGCCGAACTCATCCCAT+TGG | + | chr8.4:49190648-49190667 | MS.gene38969:intron | 60.0% | |
| CGAGGCGGTTGTGGGTTTCT+TGG | + | chr8.4:49188291-49188310 | MS.gene38969:intron | 60.0% | |
| CTCCACGCTTCAGGCCCAAT+GGG | - | chr8.4:49190666-49190685 | None:intergenic | 60.0% | |
| CTCCACGCTTCAGGCCCATT+GGG | - | chr8.4:49190819-49190838 | None:intergenic | 60.0% | |
| GCCATTTCCTTGGGAACCGG+AGG | + | chr8.4:49188131-49188150 | MS.gene38969:intron | 60.0% | |
| GGCTTGCATCTCCACGCTTC+AGG | - | chr8.4:49190675-49190694 | None:intergenic | 60.0% | |
| GGGTTGGGCTAAAGCGTGAG+GGG | - | chr8.4:49191071-49191090 | None:intergenic | 60.0% | |
| GGTTGGGCTAAAGCGTGAGG+GGG | - | chr8.4:49191070-49191089 | None:intergenic | 60.0% | |
| GTTAGCGGCCAACACTCGGA+TGG | - | chr8.4:49190772-49190791 | None:intergenic | 60.0% | |
| TCTCCACGCTTCAGGCCCAA+TGG | - | chr8.4:49190667-49190686 | None:intergenic | 60.0% | |
| TCTCCACGCTTCAGGCCCAT+TGG | - | chr8.4:49190820-49190839 | None:intergenic | 60.0% | |
| TGGAGATGCAAGCCCCACGA+TGG | + | chr8.4:49190681-49190700 | MS.gene38969:intron | 60.0% | |
| TTAGCGGCCAACACTCGGGT+GGG | - | chr8.4:49191267-49191286 | None:intergenic | 60.0% | |
| ! | AGCGTGAGGGGGTGTGTTAG+CGG | - | chr8.4:49190787-49190806 | None:intergenic | 60.0% |
| ! | TGGGCTGGGCTAAAGCGTGA+GGG | - | chr8.4:49190800-49190819 | None:intergenic | 60.0% |
| ! | TGTGAGGGGGTGTGTTAGCG+GGG | - | chr8.4:49190851-49190870 | None:intergenic | 60.0% |
| ! | TTCCCGTCTTCGGACTGGAG+TGG | + | chr8.4:49188889-49188908 | MS.gene38969:intron | 60.0% |
| ! | TTGGGCTGGGCTAAAGCGTG+AGG | - | chr8.4:49190801-49190820 | None:intergenic | 60.0% |
| !! | AGCCCCATGATGGACCCGAT+AGG | + | chr8.4:49191116-49191135 | MS.gene38969:intron | 60.0% |
| ACGCTTCAGGCCCATTGGGC+TGG | - | chr8.4:49190815-49190834 | None:intergenic | 65.0% | |
| AGCCCAATGGGCCTGAAGCG+TGG | + | chr8.4:49190814-49190833 | MS.gene38969:intron | 65.0% | |
| AGGACATGGCGCTGCATGGC+TGG | + | chr8.4:49189760-49189779 | MS.gene38969:intron | 65.0% | |
| AGGGTGGGCAGCAGGAAACC+TGG | + | chr8.4:49188561-49188580 | MS.gene38969:intron | 65.0% | |
| CGCTTCAGGCCCATTGGGCT+GGG | - | chr8.4:49190814-49190833 | None:intergenic | 65.0% | |
| GCCGCTAACACACCCCCTCA+CGG | + | chr8.4:49190783-49190802 | MS.gene38969:intron | 65.0% | |
| GCGTGTTCCCGTCTTCGGAC+TGG | + | chr8.4:49188884-49188903 | MS.gene38969:intron | 65.0% | |
| GGCTGGGCTAAAGCGTGAGG+GGG | - | chr8.4:49190798-49190817 | None:intergenic | 65.0% | |
| GGGCTGGGCTAAAGCGTGAG+GGG | - | chr8.4:49190799-49190818 | None:intergenic | 65.0% | |
| GGGTGTGTTAGCGGCCGTGA+GGG | - | chr8.4:49190925-49190944 | None:intergenic | 65.0% | |
| GGTGTGTTAGCGGCCGTGAG+GGG | - | chr8.4:49190924-49190943 | None:intergenic | 65.0% | |
| GTGGGCAGCAGGAAACCTGG+AGG | + | chr8.4:49188564-49188583 | MS.gene38969:intron | 65.0% | |
| GTGTGTTAGCGGCCGTGAGG+GGG | - | chr8.4:49190923-49190942 | None:intergenic | 65.0% | |
| GTTAGCGGCCAACACTCGGG+TGG | - | chr8.4:49191268-49191287 | None:intergenic | 65.0% | |
| ! | GATGATGGCCCTCCACCCAC+AGG | + | chr8.4:49192187-49192206 | MS.gene38969:CDS | 65.0% |
| ! | GCCGTGAGGGGGTGTGTTAG+CGG | - | chr8.4:49190912-49190931 | None:intergenic | 65.0% |
| ! | GTATTGGCAGGGTGGGCAGC+AGG | + | chr8.4:49188553-49188572 | MS.gene38969:intron | 65.0% |
| ! | GTGAGGGGGTGTGTTAGCGG+GGG | - | chr8.4:49190784-49190803 | None:intergenic | 65.0% |
| ! | TGAGGGGGTGTGTTAGCGGG+GGG | - | chr8.4:49190849-49190868 | None:intergenic | 65.0% |
| GGGGTGTGTTAGCGGCCGTG+AGG | - | chr8.4:49190926-49190945 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 49187671 | 49192350 | 49187671 | ID=MS.gene38969 |
| chr8.4 | mRNA | 49187671 | 49192350 | 49187671 | ID=MS.gene38969.t1;Parent=MS.gene38969 |
| chr8.4 | exon | 49187671 | 49187878 | 49187671 | ID=MS.gene38969.t1.exon1;Parent=MS.gene38969.t1 |
| chr8.4 | CDS | 49187671 | 49187878 | 49187671 | ID=cds.MS.gene38969.t1;Parent=MS.gene38969.t1 |
| chr8.4 | exon | 49189320 | 49189431 | 49189320 | ID=MS.gene38969.t1.exon2;Parent=MS.gene38969.t1 |
| chr8.4 | CDS | 49189320 | 49189431 | 49189320 | ID=cds.MS.gene38969.t1;Parent=MS.gene38969.t1 |
| chr8.4 | exon | 49191813 | 49191878 | 49191813 | ID=MS.gene38969.t1.exon3;Parent=MS.gene38969.t1 |
| chr8.4 | CDS | 49191813 | 49191878 | 49191813 | ID=cds.MS.gene38969.t1;Parent=MS.gene38969.t1 |
| chr8.4 | exon | 49192033 | 49192230 | 49192033 | ID=MS.gene38969.t1.exon4;Parent=MS.gene38969.t1 |
| chr8.4 | CDS | 49192033 | 49192230 | 49192033 | ID=cds.MS.gene38969.t1;Parent=MS.gene38969.t1 |
| chr8.4 | exon | 49192320 | 49192350 | 49192320 | ID=MS.gene38969.t1.exon5;Parent=MS.gene38969.t1 |
| chr8.4 | CDS | 49192320 | 49192350 | 49192320 | ID=cds.MS.gene38969.t1;Parent=MS.gene38969.t1 |
| Gene Sequence |
| Protein sequence |
