Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39686.t1 | XP_003626788.2 | 67.6 | 364 | 8 | 1 | 1 | 254 | 1 | 364 | 3.60E-128 | 467.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39686.t1 | Q9LTH7 | 38.9 | 365 | 105 | 6 | 7 | 254 | 3 | 366 | 1.6e-63 | 244.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39686.t1 | G7LCL3 | 67.6 | 364 | 8 | 1 | 1 | 254 | 1 | 364 | 2.6e-128 | 467.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050820 | MS.gene39686 | 0.807906 | 4.02E-50 | -1.69E-46 |
MS.gene053646 | MS.gene39686 | 0.800847 | 1.19E-48 | -1.69E-46 |
MS.gene055356 | MS.gene39686 | 0.806143 | 9.49E-50 | -1.69E-46 |
MS.gene058935 | MS.gene39686 | 0.81918 | 1.33E-52 | -1.69E-46 |
MS.gene061114 | MS.gene39686 | -0.838332 | 3.06E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39686.t1 | MTR_8g009090 | 95.349 | 172 | 8 | 0 | 1 | 172 | 1 | 172 | 4.80e-120 | 347 |
MS.gene39686.t1 | MTR_8g009090 | 95.402 | 87 | 4 | 0 | 168 | 254 | 278 | 364 | 1.46e-51 | 172 |
MS.gene39686.t1 | MTR_8g008930 | 85.326 | 184 | 26 | 1 | 1 | 183 | 1 | 184 | 5.08e-112 | 327 |
MS.gene39686.t1 | MTR_8g008930 | 89.655 | 87 | 9 | 0 | 168 | 254 | 279 | 365 | 9.74e-48 | 162 |
MS.gene39686.t1 | MTR_8g028435 | 71.498 | 207 | 56 | 1 | 1 | 207 | 1 | 204 | 3.10e-104 | 306 |
MS.gene39686.t1 | MTR_8g028435 | 82.759 | 87 | 15 | 0 | 168 | 254 | 278 | 364 | 5.36e-43 | 149 |
MS.gene39686.t1 | MTR_8g009170 | 76.882 | 186 | 42 | 1 | 1 | 185 | 1 | 186 | 1.79e-100 | 295 |
MS.gene39686.t1 | MTR_8g009170 | 76.882 | 186 | 42 | 1 | 1 | 185 | 1 | 186 | 8.48e-100 | 295 |
MS.gene39686.t1 | MTR_8g009170 | 79.545 | 88 | 17 | 1 | 168 | 254 | 279 | 366 | 1.14e-40 | 144 |
MS.gene39686.t1 | MTR_8g009160 | 79.651 | 172 | 35 | 0 | 1 | 172 | 1 | 172 | 1.45e-99 | 295 |
MS.gene39686.t1 | MTR_8g009160 | 82.759 | 87 | 15 | 0 | 168 | 254 | 278 | 364 | 5.92e-44 | 152 |
MS.gene39686.t1 | MTR_8g009110 | 78.613 | 173 | 36 | 1 | 1 | 172 | 1 | 173 | 1.48e-95 | 285 |
MS.gene39686.t1 | MTR_8g009110 | 85.057 | 87 | 13 | 0 | 168 | 254 | 279 | 365 | 1.94e-45 | 156 |
MS.gene39686.t1 | MTR_8g009120 | 75.141 | 177 | 43 | 1 | 1 | 176 | 1 | 177 | 7.76e-93 | 277 |
MS.gene39686.t1 | MTR_8g009120 | 84.416 | 77 | 12 | 0 | 178 | 254 | 277 | 353 | 4.77e-38 | 136 |
MS.gene39686.t1 | MTR_8g009150 | 75.723 | 173 | 41 | 1 | 1 | 172 | 1 | 173 | 7.00e-92 | 275 |
MS.gene39686.t1 | MTR_8g009150 | 78.161 | 87 | 19 | 0 | 168 | 254 | 259 | 345 | 2.39e-40 | 142 |
MS.gene39686.t1 | MTR_4g117880 | 70.520 | 173 | 50 | 1 | 1 | 172 | 1 | 173 | 1.27e-85 | 259 |
MS.gene39686.t1 | MTR_4g117880 | 72.727 | 88 | 23 | 1 | 168 | 254 | 279 | 366 | 1.44e-34 | 127 |
MS.gene39686.t1 | MTR_2g069210 | 60.541 | 185 | 68 | 3 | 2 | 183 | 4 | 186 | 4.38e-71 | 222 |
MS.gene39686.t1 | MTR_2g069210 | 73.494 | 83 | 22 | 0 | 172 | 254 | 285 | 367 | 2.10e-37 | 135 |
MS.gene39686.t1 | MTR_2g069090 | 62.778 | 180 | 58 | 3 | 1 | 172 | 1 | 179 | 1.53e-69 | 218 |
MS.gene39686.t1 | MTR_2g069090 | 73.563 | 87 | 23 | 0 | 168 | 254 | 286 | 372 | 9.29e-38 | 136 |
MS.gene39686.t1 | MTR_2g069190 | 63.975 | 161 | 54 | 2 | 15 | 172 | 20 | 179 | 7.15e-67 | 211 |
MS.gene39686.t1 | MTR_2g069190 | 72.414 | 87 | 24 | 0 | 168 | 254 | 285 | 371 | 2.30e-38 | 137 |
MS.gene39686.t1 | MTR_2g069300 | 52.153 | 209 | 92 | 4 | 15 | 219 | 6 | 210 | 2.57e-65 | 207 |
MS.gene39686.t1 | MTR_2g069300 | 59.770 | 87 | 35 | 0 | 168 | 254 | 272 | 358 | 1.35e-32 | 122 |
MS.gene39686.t1 | MTR_8g009080 | 57.738 | 168 | 66 | 4 | 6 | 170 | 38 | 203 | 9.19e-58 | 187 |
MS.gene39686.t1 | MTR_8g009080 | 57.738 | 168 | 66 | 4 | 6 | 170 | 38 | 203 | 1.68e-57 | 186 |
MS.gene39686.t1 | MTR_8g009080 | 57.738 | 168 | 66 | 4 | 6 | 170 | 38 | 203 | 4.86e-57 | 187 |
MS.gene39686.t1 | MTR_8g009080 | 70.115 | 87 | 26 | 0 | 168 | 254 | 311 | 397 | 9.44e-36 | 131 |
MS.gene39686.t1 | MTR_1g043770 | 50.526 | 190 | 88 | 4 | 19 | 207 | 11 | 195 | 1.11e-56 | 183 |
MS.gene39686.t1 | MTR_1g043770 | 50.526 | 190 | 88 | 4 | 19 | 207 | 11 | 195 | 1.48e-56 | 184 |
MS.gene39686.t1 | MTR_1g043770 | 59.770 | 87 | 35 | 0 | 168 | 254 | 269 | 355 | 3.37e-30 | 115 |
MS.gene39686.t1 | MTR_1g043760 | 55.696 | 158 | 66 | 3 | 17 | 172 | 9 | 164 | 2.25e-54 | 179 |
MS.gene39686.t1 | MTR_1g043760 | 53.488 | 86 | 40 | 0 | 168 | 253 | 270 | 355 | 2.65e-21 | 91.7 |
MS.gene39686.t1 | MTR_1g044105 | 51.205 | 166 | 71 | 4 | 17 | 174 | 9 | 172 | 4.16e-52 | 167 |
MS.gene39686.t1 | MTR_1g043775 | 46.907 | 194 | 95 | 5 | 17 | 207 | 9 | 197 | 1.50e-51 | 170 |
MS.gene39686.t1 | MTR_1g043775 | 46.907 | 194 | 95 | 5 | 17 | 207 | 9 | 197 | 4.41e-51 | 170 |
MS.gene39686.t1 | MTR_1g043775 | 56.322 | 87 | 38 | 0 | 168 | 254 | 271 | 357 | 1.25e-27 | 108 |
MS.gene39686.t1 | MTR_1g043810 | 44.330 | 194 | 100 | 5 | 17 | 207 | 9 | 197 | 8.58e-49 | 164 |
MS.gene39686.t1 | MTR_1g043810 | 44.330 | 194 | 100 | 5 | 17 | 207 | 9 | 197 | 2.35e-48 | 163 |
MS.gene39686.t1 | MTR_1g043810 | 56.322 | 87 | 38 | 0 | 168 | 254 | 271 | 357 | 1.19e-28 | 111 |
MS.gene39686.t1 | MTR_1g093140 | 49.425 | 174 | 69 | 5 | 13 | 170 | 12 | 182 | 4.92e-48 | 163 |
MS.gene39686.t1 | MTR_1g093140 | 50.562 | 89 | 42 | 1 | 168 | 254 | 290 | 378 | 1.08e-20 | 90.1 |
MS.gene39686.t1 | MTR_7g056347 | 41.232 | 211 | 111 | 5 | 4 | 207 | 6 | 210 | 1.27e-47 | 162 |
MS.gene39686.t1 | MTR_7g056347 | 55.556 | 90 | 37 | 1 | 168 | 254 | 284 | 373 | 5.43e-26 | 104 |
MS.gene39686.t1 | MTR_8g041600 | 46.961 | 181 | 85 | 4 | 17 | 191 | 22 | 197 | 1.28e-47 | 160 |
MS.gene39686.t1 | MTR_8g041600 | 46.961 | 181 | 85 | 4 | 17 | 191 | 22 | 197 | 7.97e-47 | 160 |
MS.gene39686.t1 | MTR_8g041600 | 59.091 | 88 | 35 | 1 | 168 | 254 | 287 | 374 | 1.89e-27 | 108 |
MS.gene39686.t1 | MTR_8g063070 | 42.697 | 178 | 96 | 4 | 1 | 173 | 3 | 179 | 9.19e-47 | 159 |
MS.gene39686.t1 | MTR_8g063070 | 51.111 | 90 | 41 | 1 | 168 | 254 | 284 | 373 | 4.18e-19 | 85.9 |
MS.gene39686.t1 | MTR_8g041620 | 50.000 | 162 | 73 | 3 | 17 | 172 | 22 | 181 | 3.64e-46 | 158 |
MS.gene39686.t1 | MTR_8g041620 | 55.682 | 88 | 38 | 1 | 168 | 254 | 287 | 374 | 6.24e-26 | 104 |
MS.gene39686.t1 | MTR_4g119410 | 44.828 | 174 | 86 | 4 | 4 | 170 | 6 | 176 | 1.27e-45 | 157 |
MS.gene39686.t1 | MTR_4g119410 | 56.667 | 90 | 36 | 1 | 168 | 254 | 284 | 373 | 6.51e-25 | 102 |
MS.gene39686.t1 | MTR_1g093120 | 43.750 | 176 | 91 | 4 | 1 | 170 | 3 | 176 | 3.35e-45 | 155 |
MS.gene39686.t1 | MTR_1g093120 | 51.724 | 87 | 42 | 0 | 168 | 254 | 284 | 370 | 2.55e-23 | 97.4 |
MS.gene39686.t1 | MTR_7g078010 | 40.758 | 211 | 112 | 5 | 4 | 207 | 6 | 210 | 4.63e-45 | 153 |
MS.gene39686.t1 | MTR_8g062600 | 39.252 | 214 | 111 | 5 | 4 | 207 | 6 | 210 | 4.97e-45 | 155 |
MS.gene39686.t1 | MTR_8g062600 | 51.111 | 90 | 41 | 1 | 168 | 254 | 284 | 373 | 2.12e-22 | 95.1 |
MS.gene39686.t1 | MTR_7g078010 | 40.758 | 211 | 112 | 5 | 4 | 207 | 6 | 210 | 2.92e-44 | 153 |
MS.gene39686.t1 | MTR_7g078010 | 47.778 | 90 | 44 | 1 | 168 | 254 | 284 | 373 | 2.43e-19 | 86.3 |
MS.gene39686.t1 | MTR_8g006930 | 38.863 | 211 | 116 | 5 | 4 | 207 | 6 | 210 | 5.06e-44 | 152 |
MS.gene39686.t1 | MTR_8g006930 | 55.556 | 90 | 37 | 1 | 168 | 254 | 284 | 373 | 1.96e-24 | 100 |
MS.gene39686.t1 | MTR_4g024660 | 42.775 | 173 | 93 | 4 | 3 | 170 | 5 | 176 | 1.56e-43 | 151 |
MS.gene39686.t1 | MTR_4g024660 | 50.000 | 90 | 42 | 1 | 168 | 254 | 284 | 373 | 1.45e-21 | 92.8 |
MS.gene39686.t1 | MTR_0032s0040 | 41.117 | 197 | 97 | 4 | 1 | 182 | 1 | 193 | 3.10e-42 | 148 |
MS.gene39686.t1 | MTR_0032s0040 | 56.818 | 88 | 37 | 1 | 168 | 254 | 286 | 373 | 8.06e-27 | 107 |
MS.gene39686.t1 | MTR_8g009180 | 79.310 | 87 | 18 | 0 | 168 | 254 | 208 | 294 | 9.35e-42 | 144 |
MS.gene39686.t1 | MTR_8g009180 | 76.923 | 39 | 9 | 0 | 134 | 172 | 48 | 86 | 1.08e-14 | 72.4 |
MS.gene39686.t1 | MTR_1g093110 | 44.512 | 164 | 78 | 4 | 17 | 170 | 19 | 179 | 3.78e-41 | 145 |
MS.gene39686.t1 | MTR_1g093110 | 53.409 | 88 | 40 | 1 | 168 | 254 | 287 | 374 | 3.49e-23 | 97.1 |
MS.gene39686.t1 | MTR_4g099380 | 45.283 | 159 | 75 | 3 | 19 | 172 | 129 | 280 | 4.65e-41 | 142 |
MS.gene39686.t1 | MTR_2g069020 | 44.654 | 159 | 83 | 3 | 16 | 170 | 19 | 176 | 6.56e-41 | 144 |
MS.gene39686.t1 | MTR_2g069020 | 45.977 | 87 | 39 | 3 | 168 | 250 | 284 | 366 | 1.47e-14 | 72.8 |
MS.gene39686.t1 | MTR_2g069020 | 44.654 | 159 | 83 | 3 | 16 | 170 | 19 | 176 | 1.73e-40 | 144 |
MS.gene39686.t1 | MTR_2g069020 | 45.977 | 87 | 39 | 3 | 168 | 250 | 284 | 366 | 2.01e-14 | 72.4 |
MS.gene39686.t1 | MTR_7g056393 | 40.984 | 183 | 98 | 4 | 4 | 179 | 6 | 185 | 1.86e-40 | 143 |
MS.gene39686.t1 | MTR_7g056393 | 57.778 | 90 | 35 | 1 | 168 | 254 | 284 | 373 | 1.11e-26 | 106 |
MS.gene39686.t1 | MTR_7g029655 | 41.573 | 178 | 90 | 3 | 2 | 172 | 5 | 175 | 2.45e-40 | 143 |
MS.gene39686.t1 | MTR_7g029655 | 56.667 | 90 | 36 | 2 | 168 | 254 | 281 | 370 | 1.53e-25 | 103 |
MS.gene39686.t1 | MTR_2g069010 | 41.040 | 173 | 94 | 3 | 16 | 181 | 21 | 192 | 4.09e-40 | 142 |
MS.gene39686.t1 | MTR_2g069010 | 52.747 | 91 | 38 | 2 | 168 | 254 | 286 | 375 | 1.53e-20 | 89.7 |
MS.gene39686.t1 | MTR_2g068950 | 42.197 | 173 | 92 | 4 | 16 | 181 | 15 | 186 | 1.06e-38 | 138 |
MS.gene39686.t1 | MTR_2g068950 | 50.549 | 91 | 40 | 2 | 168 | 254 | 280 | 369 | 6.25e-19 | 85.1 |
MS.gene39686.t1 | MTR_2g068960 | 41.714 | 175 | 90 | 4 | 16 | 181 | 15 | 186 | 5.94e-38 | 136 |
MS.gene39686.t1 | MTR_2g068960 | 48.352 | 91 | 42 | 2 | 168 | 254 | 280 | 369 | 1.35e-18 | 84.3 |
MS.gene39686.t1 | MTR_7g056370 | 42.038 | 157 | 84 | 3 | 18 | 170 | 2 | 155 | 6.20e-37 | 130 |
MS.gene39686.t1 | MTR_8g469400 | 40.116 | 172 | 85 | 4 | 4 | 170 | 6 | 164 | 2.97e-36 | 132 |
MS.gene39686.t1 | MTR_8g469400 | 50.000 | 90 | 42 | 1 | 168 | 254 | 271 | 360 | 4.74e-22 | 94.0 |
MS.gene39686.t1 | MTR_2g069060 | 44.231 | 156 | 68 | 3 | 16 | 170 | 21 | 158 | 3.85e-36 | 131 |
MS.gene39686.t1 | MTR_2g069060 | 55.172 | 87 | 36 | 2 | 168 | 254 | 266 | 349 | 8.18e-24 | 98.6 |
MS.gene39686.t1 | MTR_2g069070 | 36.842 | 190 | 99 | 4 | 16 | 204 | 21 | 190 | 6.24e-34 | 121 |
MS.gene39686.t1 | MTR_1g070185 | 36.723 | 177 | 106 | 2 | 17 | 190 | 23 | 196 | 6.51e-33 | 123 |
MS.gene39686.t1 | MTR_1g070185 | 52.874 | 87 | 38 | 1 | 168 | 254 | 284 | 367 | 8.57e-23 | 95.9 |
MS.gene39686.t1 | MTR_2g069060 | 48.718 | 117 | 59 | 1 | 54 | 170 | 21 | 136 | 9.17e-33 | 120 |
MS.gene39686.t1 | MTR_8g008960 | 68.919 | 74 | 23 | 0 | 181 | 254 | 29 | 102 | 2.00e-32 | 114 |
MS.gene39686.t1 | MTR_7g105070 | 38.710 | 155 | 90 | 2 | 19 | 170 | 15 | 167 | 2.15e-32 | 122 |
MS.gene39686.t1 | MTR_7g105070 | 38.636 | 88 | 53 | 1 | 168 | 254 | 275 | 362 | 3.68e-11 | 62.8 |
MS.gene39686.t1 | MTR_1g032220 | 37.179 | 156 | 90 | 2 | 19 | 170 | 28 | 179 | 3.02e-29 | 113 |
MS.gene39686.t1 | MTR_1g032220 | 39.080 | 87 | 50 | 2 | 168 | 253 | 287 | 371 | 1.90e-11 | 63.5 |
MS.gene39686.t1 | MTR_1g032140 | 38.776 | 147 | 82 | 2 | 19 | 161 | 21 | 163 | 2.56e-28 | 110 |
MS.gene39686.t1 | MTR_1g032140 | 42.529 | 87 | 47 | 2 | 168 | 253 | 280 | 364 | 2.46e-12 | 66.2 |
MS.gene39686.t1 | MTR_1g032250 | 35.256 | 156 | 93 | 2 | 19 | 170 | 28 | 179 | 2.60e-27 | 108 |
MS.gene39686.t1 | MTR_1g043840 | 55.405 | 74 | 32 | 1 | 71 | 144 | 256 | 328 | 7.28e-22 | 93.2 |
MS.gene39686.t1 | MTR_1g043840 | 46.970 | 66 | 31 | 1 | 173 | 234 | 158 | 223 | 5.53e-12 | 65.1 |
MS.gene39686.t1 | MTR_4g099390 | 51.190 | 84 | 39 | 1 | 173 | 254 | 1 | 84 | 4.39e-21 | 84.7 |
MS.gene39686.t1 | MTR_7g056353 | 34.194 | 155 | 73 | 4 | 17 | 170 | 24 | 150 | 5.81e-21 | 91.7 |
MS.gene39686.t1 | MTR_7g056353 | 52.809 | 89 | 39 | 1 | 168 | 253 | 258 | 346 | 9.89e-20 | 88.2 |
MS.gene39686.t1 | MTR_7g068650 | 33.333 | 144 | 84 | 5 | 19 | 153 | 6 | 146 | 8.34e-18 | 82.0 |
MS.gene39686.t1 | MTR_3g091350 | 31.013 | 158 | 86 | 4 | 13 | 161 | 18 | 161 | 1.67e-16 | 78.2 |
MS.gene39686.t1 | MTR_2g068850 | 36.641 | 131 | 74 | 5 | 27 | 153 | 21 | 146 | 4.08e-16 | 75.1 |
MS.gene39686.t1 | MTR_5g065010 | 28.571 | 147 | 102 | 2 | 27 | 170 | 3 | 149 | 1.07e-15 | 75.9 |
MS.gene39686.t1 | MTR_2g068840 | 33.784 | 148 | 89 | 5 | 27 | 170 | 21 | 163 | 4.73e-15 | 73.9 |
MS.gene39686.t1 | MTR_1g062110 | 32.051 | 156 | 91 | 5 | 27 | 171 | 26 | 177 | 8.68e-15 | 73.6 |
MS.gene39686.t1 | MTR_1g062110 | 32.051 | 156 | 91 | 5 | 27 | 171 | 26 | 177 | 1.35e-14 | 72.4 |
MS.gene39686.t1 | MTR_1g032230 | 30.323 | 155 | 78 | 3 | 1 | 148 | 1 | 132 | 1.72e-14 | 71.6 |
MS.gene39686.t1 | MTR_5g048570 | 30.233 | 129 | 81 | 3 | 27 | 153 | 12 | 133 | 1.01e-13 | 70.1 |
MS.gene39686.t1 | MTR_3g070860 | 27.536 | 138 | 96 | 2 | 19 | 153 | 6 | 142 | 1.66e-13 | 69.7 |
MS.gene39686.t1 | MTR_8g075830 | 38.614 | 101 | 58 | 3 | 54 | 153 | 33 | 130 | 5.06e-13 | 68.2 |
MS.gene39686.t1 | MTR_2g068800 | 30.345 | 145 | 79 | 3 | 27 | 170 | 21 | 144 | 6.79e-13 | 67.4 |
MS.gene39686.t1 | MTR_5g048550 | 29.530 | 149 | 93 | 5 | 27 | 170 | 12 | 153 | 1.04e-12 | 67.4 |
MS.gene39686.t1 | MTR_5g048850 | 31.818 | 154 | 82 | 7 | 28 | 166 | 13 | 158 | 1.63e-12 | 66.2 |
MS.gene39686.t1 | MTR_5g048850 | 31.818 | 154 | 82 | 7 | 28 | 166 | 13 | 158 | 1.88e-12 | 66.6 |
MS.gene39686.t1 | MTR_7g062570 | 28.058 | 139 | 88 | 4 | 28 | 161 | 20 | 151 | 2.66e-12 | 66.2 |
MS.gene39686.t1 | MTR_4g015790 | 25.592 | 211 | 123 | 6 | 19 | 204 | 5 | 206 | 2.74e-12 | 66.2 |
MS.gene39686.t1 | MTR_5g055900 | 31.387 | 137 | 74 | 6 | 43 | 166 | 29 | 158 | 3.13e-12 | 65.9 |
MS.gene39686.t1 | MTR_3g091360 | 35.165 | 91 | 56 | 1 | 39 | 126 | 28 | 118 | 3.79e-12 | 65.5 |
MS.gene39686.t1 | MTR_5g055690 | 30.496 | 141 | 84 | 6 | 27 | 161 | 12 | 144 | 5.78e-12 | 64.3 |
MS.gene39686.t1 | MTR_0009s0050 | 28.859 | 149 | 94 | 5 | 27 | 170 | 12 | 153 | 6.07e-12 | 65.1 |
MS.gene39686.t1 | MTR_0009s0050 | 28.859 | 149 | 94 | 5 | 27 | 170 | 12 | 153 | 6.31e-12 | 65.1 |
MS.gene39686.t1 | MTR_0009s0410 | 28.462 | 130 | 82 | 4 | 28 | 153 | 12 | 134 | 6.48e-12 | 62.8 |
MS.gene39686.t1 | MTR_5g055690 | 30.496 | 141 | 84 | 6 | 27 | 161 | 12 | 144 | 6.76e-12 | 65.1 |
MS.gene39686.t1 | MTR_5g055820 | 28.571 | 154 | 89 | 6 | 27 | 166 | 12 | 158 | 7.29e-12 | 64.7 |
MS.gene39686.t1 | MTR_8g024120 | 31.852 | 135 | 81 | 4 | 26 | 153 | 2 | 132 | 8.25e-12 | 64.7 |
MS.gene39686.t1 | MTR_5g048740 | 26.904 | 197 | 114 | 9 | 28 | 203 | 11 | 198 | 8.99e-12 | 64.7 |
MS.gene39686.t1 | MTR_3g045230 | 28.221 | 163 | 105 | 4 | 27 | 183 | 17 | 173 | 1.43e-11 | 63.9 |
MS.gene39686.t1 | MTR_7g062580 | 27.660 | 141 | 90 | 4 | 27 | 162 | 19 | 152 | 1.73e-11 | 63.5 |
MS.gene39686.t1 | MTR_5g055800 | 29.221 | 154 | 86 | 8 | 28 | 166 | 13 | 158 | 1.77e-11 | 63.5 |
MS.gene39686.t1 | MTR_7g081710 | 24.862 | 181 | 129 | 3 | 31 | 207 | 17 | 194 | 2.49e-11 | 63.2 |
MS.gene39686.t1 | MTR_8g075890 | 34.746 | 118 | 72 | 4 | 41 | 156 | 19 | 133 | 2.56e-11 | 63.2 |
MS.gene39686.t1 | MTR_5g032880 | 40.845 | 71 | 41 | 1 | 60 | 130 | 376 | 445 | 3.00e-11 | 63.5 |
MS.gene39686.t1 | MTR_3g092890 | 32.979 | 94 | 57 | 1 | 60 | 153 | 38 | 125 | 4.18e-11 | 62.4 |
MS.gene39686.t1 | MTR_0009s0480 | 31.818 | 110 | 67 | 4 | 28 | 133 | 12 | 117 | 6.05e-11 | 61.6 |
MS.gene39686.t1 | MTR_5g025050 | 42.424 | 66 | 32 | 1 | 59 | 124 | 4 | 63 | 7.97e-11 | 61.6 |
MS.gene39686.t1 | MTR_1g034140 | 43.939 | 66 | 31 | 1 | 60 | 125 | 27 | 86 | 8.10e-11 | 61.6 |
MS.gene39686.t1 | MTR_0009s0480 | 29.231 | 130 | 81 | 5 | 28 | 153 | 12 | 134 | 9.25e-11 | 61.6 |
MS.gene39686.t1 | MTR_5g032870 | 45.833 | 72 | 35 | 3 | 172 | 242 | 266 | 334 | 9.96e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene39686.t1 | AT1G06650 | 52.174 | 161 | 71 | 2 | 16 | 170 | 14 | 174 | 1.37e-54 | 178 |
MS.gene39686.t1 | AT1G06650 | 52.174 | 161 | 71 | 2 | 16 | 170 | 14 | 174 | 2.92e-54 | 179 |
MS.gene39686.t1 | AT1G06650 | 68.182 | 88 | 27 | 1 | 168 | 254 | 282 | 369 | 3.24e-36 | 132 |
MS.gene39686.t1 | AT5G59540 | 48.677 | 189 | 87 | 5 | 1 | 183 | 1 | 185 | 3.28e-54 | 176 |
MS.gene39686.t1 | AT5G59540 | 51.445 | 173 | 77 | 4 | 17 | 183 | 14 | 185 | 1.28e-53 | 177 |
MS.gene39686.t1 | AT5G59540 | 62.069 | 87 | 33 | 0 | 168 | 254 | 280 | 366 | 1.83e-31 | 119 |
MS.gene39686.t1 | AT1G06640 | 52.147 | 163 | 68 | 3 | 16 | 170 | 14 | 174 | 3.36e-52 | 171 |
MS.gene39686.t1 | AT1G06640 | 52.147 | 163 | 68 | 3 | 16 | 170 | 14 | 174 | 4.57e-52 | 172 |
MS.gene39686.t1 | AT1G06620 | 52.903 | 155 | 69 | 2 | 19 | 170 | 18 | 171 | 6.99e-52 | 170 |
MS.gene39686.t1 | AT1G06640 | 52.147 | 163 | 68 | 3 | 16 | 170 | 14 | 174 | 1.18e-51 | 172 |
MS.gene39686.t1 | AT1G06640 | 61.364 | 88 | 33 | 1 | 168 | 254 | 282 | 369 | 5.25e-30 | 115 |
MS.gene39686.t1 | AT1G06620 | 52.903 | 155 | 69 | 2 | 19 | 170 | 18 | 171 | 3.65e-51 | 171 |
MS.gene39686.t1 | AT1G06620 | 60.920 | 87 | 34 | 0 | 168 | 254 | 279 | 365 | 9.46e-31 | 117 |
MS.gene39686.t1 | AT2G30840 | 50.000 | 160 | 75 | 2 | 16 | 170 | 9 | 168 | 5.17e-51 | 169 |
MS.gene39686.t1 | AT2G30840 | 50.000 | 160 | 75 | 2 | 16 | 170 | 9 | 168 | 9.38e-51 | 170 |
MS.gene39686.t1 | AT2G30840 | 57.955 | 88 | 35 | 2 | 168 | 254 | 276 | 362 | 6.04e-23 | 96.3 |
MS.gene39686.t1 | AT2G30840 | 50.000 | 160 | 75 | 2 | 16 | 170 | 9 | 168 | 1.05e-50 | 169 |
MS.gene39686.t1 | AT2G30840 | 58.228 | 79 | 31 | 2 | 177 | 254 | 279 | 356 | 1.12e-19 | 87.4 |
MS.gene39686.t1 | AT1G06645 | 52.941 | 153 | 66 | 2 | 16 | 162 | 27 | 179 | 1.07e-50 | 170 |
MS.gene39686.t1 | AT1G06645 | 63.636 | 88 | 31 | 1 | 168 | 254 | 292 | 379 | 5.95e-32 | 120 |
MS.gene39686.t1 | AT1G04350 | 47.458 | 177 | 84 | 3 | 14 | 185 | 8 | 180 | 1.37e-50 | 169 |
MS.gene39686.t1 | AT1G04350 | 62.500 | 88 | 32 | 1 | 168 | 254 | 273 | 360 | 1.14e-27 | 109 |
MS.gene39686.t1 | AT5G59530 | 52.761 | 163 | 67 | 6 | 15 | 170 | 11 | 170 | 4.64e-49 | 165 |
MS.gene39686.t1 | AT5G59530 | 60.920 | 87 | 34 | 0 | 168 | 254 | 278 | 364 | 1.66e-29 | 114 |
MS.gene39686.t1 | AT2G30830 | 43.750 | 192 | 104 | 2 | 17 | 207 | 10 | 198 | 1.34e-48 | 164 |
MS.gene39686.t1 | AT2G30830 | 53.535 | 99 | 37 | 3 | 164 | 254 | 261 | 358 | 4.67e-24 | 99.4 |
MS.gene39686.t1 | AT2G25450 | 47.799 | 159 | 76 | 3 | 16 | 170 | 9 | 164 | 1.33e-46 | 159 |
MS.gene39686.t1 | AT2G25450 | 53.000 | 100 | 37 | 4 | 164 | 254 | 261 | 359 | 2.49e-21 | 92.0 |
MS.gene39686.t1 | AT5G43450 | 45.399 | 163 | 79 | 3 | 15 | 171 | 11 | 169 | 2.16e-44 | 151 |
MS.gene39686.t1 | AT1G03410 | 46.626 | 163 | 80 | 3 | 16 | 172 | 8 | 169 | 3.64e-44 | 152 |
MS.gene39686.t1 | AT1G03410 | 50.000 | 88 | 42 | 2 | 168 | 254 | 275 | 361 | 7.92e-21 | 90.5 |
MS.gene39686.t1 | AT5G43440 | 45.455 | 165 | 79 | 4 | 15 | 171 | 11 | 172 | 4.11e-44 | 150 |
MS.gene39686.t1 | AT5G43450 | 45.399 | 163 | 79 | 3 | 15 | 171 | 11 | 169 | 6.74e-44 | 152 |
MS.gene39686.t1 | AT5G43450 | 57.471 | 87 | 37 | 0 | 168 | 254 | 276 | 362 | 9.79e-25 | 101 |
MS.gene39686.t1 | AT1G03410 | 46.626 | 163 | 80 | 3 | 16 | 172 | 45 | 206 | 8.26e-44 | 152 |
MS.gene39686.t1 | AT1G03410 | 50.000 | 88 | 42 | 2 | 168 | 254 | 312 | 398 | 1.09e-20 | 90.5 |
MS.gene39686.t1 | AT5G43440 | 45.455 | 165 | 79 | 4 | 15 | 171 | 11 | 172 | 1.61e-43 | 151 |
MS.gene39686.t1 | AT5G43440 | 56.322 | 87 | 38 | 0 | 168 | 254 | 279 | 365 | 8.19e-26 | 104 |
MS.gene39686.t1 | AT3G61400 | 41.899 | 179 | 90 | 4 | 1 | 170 | 1 | 174 | 1.83e-40 | 141 |
MS.gene39686.t1 | AT3G61400 | 41.899 | 179 | 90 | 4 | 1 | 170 | 1 | 174 | 4.12e-40 | 142 |
MS.gene39686.t1 | AT3G61400 | 57.955 | 88 | 35 | 2 | 168 | 254 | 284 | 370 | 1.87e-25 | 103 |
MS.gene39686.t1 | AT1G03400 | 45.342 | 161 | 75 | 3 | 16 | 172 | 8 | 159 | 3.34e-39 | 139 |
MS.gene39686.t1 | AT1G03400 | 54.545 | 88 | 38 | 2 | 168 | 254 | 265 | 351 | 4.52e-21 | 90.9 |
MS.gene39686.t1 | AT1G03400 | 45.342 | 161 | 75 | 3 | 16 | 172 | 8 | 159 | 1.08e-38 | 139 |
MS.gene39686.t1 | AT1G03400 | 54.762 | 84 | 36 | 2 | 172 | 254 | 297 | 379 | 5.63e-20 | 88.2 |
MS.gene39686.t1 | AT1G04380 | 42.442 | 172 | 78 | 4 | 1 | 171 | 1 | 152 | 1.53e-38 | 135 |
MS.gene39686.t1 | AT1G04380 | 42.442 | 172 | 78 | 4 | 1 | 171 | 1 | 152 | 6.41e-38 | 136 |
MS.gene39686.t1 | AT1G04380 | 62.069 | 87 | 33 | 0 | 168 | 254 | 259 | 345 | 1.16e-32 | 122 |
MS.gene39686.t1 | AT1G55290 | 28.188 | 149 | 96 | 3 | 27 | 170 | 25 | 167 | 1.91e-17 | 80.9 |
MS.gene39686.t1 | AT3G13610 | 26.415 | 159 | 107 | 3 | 27 | 181 | 26 | 178 | 6.91e-17 | 79.3 |
MS.gene39686.t1 | AT2G36690 | 32.117 | 137 | 82 | 3 | 25 | 153 | 18 | 151 | 6.94e-15 | 73.6 |
MS.gene39686.t1 | AT2G36690 | 32.117 | 137 | 82 | 3 | 25 | 153 | 18 | 151 | 6.94e-15 | 73.6 |
MS.gene39686.t1 | AT3G12900 | 29.452 | 146 | 99 | 3 | 27 | 170 | 21 | 164 | 1.42e-13 | 69.7 |
MS.gene39686.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 8.41e-12 | 64.3 |
MS.gene39686.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 8.77e-12 | 64.7 |
MS.gene39686.t1 | AT3G19010 | 43.478 | 69 | 37 | 1 | 55 | 123 | 23 | 89 | 8.77e-12 | 64.7 |
MS.gene39686.t1 | AT3G19010 | 41.772 | 79 | 43 | 2 | 45 | 123 | 14 | 89 | 9.01e-12 | 64.3 |
MS.gene39686.t1 | AT5G05600 | 27.160 | 162 | 108 | 4 | 8 | 161 | 3 | 162 | 1.51e-11 | 63.5 |
MS.gene39686.t1 | AT5G05600 | 27.160 | 162 | 108 | 4 | 8 | 161 | 3 | 162 | 1.84e-11 | 63.9 |
MS.gene39686.t1 | AT2G38240 | 24.841 | 157 | 105 | 5 | 20 | 170 | 4 | 153 | 3.00e-11 | 63.2 |
MS.gene39686.t1 | AT4G10500 | 26.897 | 145 | 103 | 1 | 60 | 204 | 44 | 185 | 3.92e-11 | 62.8 |
MS.gene39686.t1 | AT3G51240 | 35.714 | 126 | 75 | 5 | 34 | 156 | 10 | 132 | 5.01e-11 | 62.4 |
Find 52 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTGTGGTTTCTCTGTATT+TGG | 0.141866 | 8.3:+79965521 | None:intergenic |
AATAACATGGCTTGTGTTAT+TGG | 0.183094 | 8.3:+79967248 | None:intergenic |
ATCTCCTCAAGAACACTTAA+AGG | 0.218480 | 8.3:+79967105 | None:intergenic |
TCTGATAATAGTTCCTTTAT+TGG | 0.252969 | 8.3:+79965555 | None:intergenic |
GAAACAAAAGCTGGTGTAAA+AGG | 0.285364 | 8.3:-79967339 | MS.gene39686:CDS |
TCTTCTGGTTTGGGAGTATC+AGG | 0.297260 | 8.3:+79966925 | None:intergenic |
CATACAACAGGAAAATCTTC+TGG | 0.327118 | 8.3:+79966910 | None:intergenic |
GATGGAGACAGATGCTAAAA+AGG | 0.327314 | 8.3:-79967055 | MS.gene39686:CDS |
AACAGGAAAATCTTCTGGTT+TGG | 0.334664 | 8.3:+79966915 | None:intergenic |
GTTATGCTTGGTTGTATTAG+TGG | 0.348348 | 8.3:+79967398 | None:intergenic |
AAAACTCTATGGACCAATAA+AGG | 0.351673 | 8.3:-79965568 | MS.gene39686:CDS |
ACAGGAAAATCTTCTGGTTT+GGG | 0.360417 | 8.3:+79966916 | None:intergenic |
TTGGCTATCTCATATTTGTC+TGG | 0.373901 | 8.3:+79967267 | None:intergenic |
AGGCCATCGTCAAAACTCTA+TGG | 0.378689 | 8.3:-79965579 | MS.gene39686:CDS |
ACTGTGGTTTCTCTGTATTT+GGG | 0.383668 | 8.3:+79965522 | None:intergenic |
AAGCATGCAACGGATATTCT+TGG | 0.388966 | 8.3:+79965618 | None:intergenic |
TCAAGGAAGCATGTGAAACT+TGG | 0.407695 | 8.3:-79967158 | MS.gene39686:CDS |
TCTCCTCAAGAACACTTAAA+GGG | 0.409011 | 8.3:+79967106 | None:intergenic |
TTTAATGCAAAAGGACTAGA+TGG | 0.415229 | 8.3:-79965480 | MS.gene39686:CDS |
GGATACTTGTACTTGTTCCT+TGG | 0.421196 | 8.3:-79966950 | MS.gene39686:CDS |
GCAGCCTACTTTAATGCAAA+AGG | 0.427099 | 8.3:-79965489 | MS.gene39686:CDS |
ATAGCTCACCAGCACTCAAT+TGG | 0.445033 | 8.3:-79966975 | MS.gene39686:CDS |
CATATTTGTCTGGTTGATGA+TGG | 0.453735 | 8.3:+79967277 | None:intergenic |
AAGTGTTCTTGAGGAGATGA+AGG | 0.463354 | 8.3:-79967100 | MS.gene39686:CDS |
ACAATCCCTTGATGAATACT+TGG | 0.466300 | 8.3:+79967189 | None:intergenic |
GTTCATTGAATGTGGAATCA+AGG | 0.469424 | 8.3:+79967376 | None:intergenic |
CAAGGAAGCATGTGAAACTT+GGG | 0.488613 | 8.3:-79967157 | MS.gene39686:CDS |
AAAGATCCAAGTATTCATCA+AGG | 0.525023 | 8.3:-79967195 | MS.gene39686:CDS |
GCTCACCAGCACTCAATTGG+AGG | 0.527842 | 8.3:-79966972 | MS.gene39686:CDS |
GTGGTTTCTCTGTATTTGGG+AGG | 0.538341 | 8.3:+79965525 | None:intergenic |
AGGGATTGTTAGCAAAATCA+AGG | 0.538978 | 8.3:-79967175 | MS.gene39686:CDS |
TGCTTTGCGTTCATTGAATG+TGG | 0.544374 | 8.3:+79967368 | None:intergenic |
AGATGAAGGATGGTGTGAAG+AGG | 0.547649 | 8.3:-79967086 | MS.gene39686:CDS |
AATCCCTTTAAGTGTTCTTG+AGG | 0.548348 | 8.3:-79967109 | MS.gene39686:CDS |
GTATCCCTCCAATTGAGTGC+TGG | 0.565810 | 8.3:+79966967 | None:intergenic |
TGTGAAGAGGTTTCATGAGA+TGG | 0.577228 | 8.3:-79967073 | MS.gene39686:CDS |
GCATTTGATGAAACAAAAGC+TGG | 0.578863 | 8.3:-79967348 | MS.gene39686:CDS |
AGAGTAGTTGCAAATCAAGT+TGG | 0.579220 | 8.3:-79965642 | MS.gene39686:CDS |
TGTGGAATCAAGGTTATGCT+TGG | 0.587238 | 8.3:+79967386 | None:intergenic |
AAGGAAGCATGTGAAACTTG+GGG | 0.598891 | 8.3:-79967156 | MS.gene39686:CDS |
ATATCTGCGAGGTCTATGAC+AGG | 0.602477 | 8.3:+79967225 | None:intergenic |
GGTTGATGATGGAATAAGCT+TGG | 0.607370 | 8.3:+79967288 | None:intergenic |
GTAAAAGGACTTGTTGATGC+AGG | 0.611662 | 8.3:-79967324 | MS.gene39686:CDS |
TTTGGGAGTATCAGGAGCCA+AGG | 0.620854 | 8.3:+79966933 | None:intergenic |
CTCACCAGCACTCAATTGGA+GGG | 0.626812 | 8.3:-79966971 | MS.gene39686:CDS |
AAGATCCAAGTATTCATCAA+GGG | 0.629484 | 8.3:-79967194 | MS.gene39686:CDS |
TGACGATGGCCTAAGACCTG+TGG | 0.634056 | 8.3:+79965590 | None:intergenic |
GGCTGCAAAATCAGCAACTG+TGG | 0.639927 | 8.3:+79965506 | None:intergenic |
GTTCTTGAGGAGATGAAGGA+TGG | 0.641296 | 8.3:-79967096 | MS.gene39686:CDS |
GGTCTATGACAGGAATAACA+TGG | 0.671635 | 8.3:+79967235 | None:intergenic |
AGGAAGCATGTGAAACTTGG+GGG | 0.692972 | 8.3:-79967155 | MS.gene39686:CDS |
CTTTATCATCAATATCTGCG+AGG | 0.708052 | 8.3:+79967214 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATGATACATTATTTTA+TGG | + | chr8.3:79966550-79966569 | None:intergenic | 10.0% |
!!! | ATTTTAGTTTAGTTTTGTTA+AGG | + | chr8.3:79966456-79966475 | None:intergenic | 15.0% |
!!! | TATAAGTTGGTTTATATATA+TGG | + | chr8.3:79966138-79966157 | None:intergenic | 15.0% |
!! | AAAATCATATCATATCCTAA+TGG | - | chr8.3:79966645-79966664 | MS.gene39686:intron | 20.0% |
!! | AAGTTCTTTATGAAGATAAA+TGG | - | chr8.3:79967017-79967036 | MS.gene39686:CDS | 20.0% |
!! | AGATAATTAAGAGATAAGAT+AGG | - | chr8.3:79966187-79966206 | MS.gene39686:intron | 20.0% |
!! | ATGAAAATAACTAAAGTTCA+AGG | + | chr8.3:79966016-79966035 | None:intergenic | 20.0% |
!! | ATTTATCTTCATAAAGAACT+TGG | + | chr8.3:79967018-79967037 | None:intergenic | 20.0% |
!! | CTTGTAAAAAAAATATAGCA+TGG | - | chr8.3:79966346-79966365 | MS.gene39686:intron | 20.0% |
!! | TAAATTCAATTTCAGACATT+TGG | + | chr8.3:79966731-79966750 | None:intergenic | 20.0% |
!! | TTTATATATATGGATATCAG+AGG | + | chr8.3:79966128-79966147 | None:intergenic | 20.0% |
!!! | ATATAATATAAAGCACCATT+AGG | + | chr8.3:79966663-79966682 | None:intergenic | 20.0% |
!!! | TGAACTTTAGTTATTTTCAT+TGG | - | chr8.3:79966016-79966035 | MS.gene39686:intron | 20.0% |
! | AGAGATATACTACTAGAATA+TGG | - | chr8.3:79966773-79966792 | MS.gene39686:intron | 25.0% |
! | ATTCGATAAAAAGTCATTGA+AGG | + | chr8.3:79966433-79966452 | None:intergenic | 25.0% |
! | CCAACTTATACGAAATATAA+AGG | - | chr8.3:79966148-79966167 | MS.gene39686:intron | 25.0% |
! | CCTTTATATTTCGTATAAGT+TGG | + | chr8.3:79966151-79966170 | None:intergenic | 25.0% |
! | GAGATATACTACTAGAATAT+GGG | - | chr8.3:79966774-79966793 | MS.gene39686:intron | 25.0% |
! | TCTGATAATAGTTCCTTTAT+TGG | + | chr8.3:79967302-79967321 | None:intergenic | 25.0% |
!! | TTTTATACAAGAGATATGCA+TGG | - | chr8.3:79965824-79965843 | MS.gene39686:intron | 25.0% |
!!! | ATCATTTGTTATAAGCTACA+AGG | + | chr8.3:79967171-79967190 | None:intergenic | 25.0% |
!!! | TAAGTTTTAACTACAGAGAT+GGG | + | chr8.3:79966294-79966313 | None:intergenic | 25.0% |
!!! | TTAAGTTTTAACTACAGAGA+TGG | + | chr8.3:79966295-79966314 | None:intergenic | 25.0% |
!!! | TTTTTTCAGGTTGTTAATCA+TGG | - | chr8.3:79965722-79965741 | MS.gene39686:intron | 25.0% |
AAAACTCTATGGACCAATAA+AGG | - | chr8.3:79967286-79967305 | MS.gene39686:CDS | 30.0% | |
AAAGATCCAAGTATTCATCA+AGG | - | chr8.3:79965659-79965678 | MS.gene39686:CDS | 30.0% | |
AAAGTCATTGAAGGACAAAA+AGG | + | chr8.3:79966424-79966443 | None:intergenic | 30.0% | |
AAGATCCAAGTATTCATCAA+GGG | - | chr8.3:79965660-79965679 | MS.gene39686:CDS | 30.0% | |
AAGTCATTGAAGGACAAAAA+GGG | + | chr8.3:79966423-79966442 | None:intergenic | 30.0% | |
TCAATTTAGTGTTTGATGAG+AGG | - | chr8.3:79966231-79966250 | MS.gene39686:intron | 30.0% | |
TTTAATGCAAAAGGACTAGA+TGG | - | chr8.3:79967374-79967393 | MS.gene39686:CDS | 30.0% | |
! | AATAACATGGCTTGTGTTAT+TGG | + | chr8.3:79965609-79965628 | None:intergenic | 30.0% |
! | CACATCTTTATCTAAAGTGT+CGG | + | chr8.3:79966047-79966066 | None:intergenic | 30.0% |
! | TAGTCCTTTTGCATTAAAGT+AGG | + | chr8.3:79967372-79967391 | None:intergenic | 30.0% |
!!! | GAATTTTTGTCAGAAGCATT+AGG | - | chr8.3:79966830-79966849 | MS.gene39686:intron | 30.0% |
AACTGTGGTTTCTCTGTATT+TGG | + | chr8.3:79967336-79967355 | None:intergenic | 35.0% | |
AATCCCTTTAAGTGTTCTTG+AGG | - | chr8.3:79965745-79965764 | MS.gene39686:intron | 35.0% | |
ACAATCCCTTGATGAATACT+TGG | + | chr8.3:79965668-79965687 | None:intergenic | 35.0% | |
ACTACTAGAATATGGGAAAC+AGG | - | chr8.3:79966781-79966800 | MS.gene39686:intron | 35.0% | |
ACTGTGGTTTCTCTGTATTT+GGG | + | chr8.3:79967335-79967354 | None:intergenic | 35.0% | |
AGAGTAGTTGCAAATCAAGT+TGG | - | chr8.3:79967212-79967231 | MS.gene39686:CDS | 35.0% | |
AGGGATTGTTAGCAAAATCA+AGG | - | chr8.3:79965679-79965698 | MS.gene39686:CDS | 35.0% | |
AGTCATTGAAGGACAAAAAG+GGG | + | chr8.3:79966422-79966441 | None:intergenic | 35.0% | |
ATCTCCTCAAGAACACTTAA+AGG | + | chr8.3:79965752-79965771 | None:intergenic | 35.0% | |
ATTGATATAACACCTGTACC+TGG | - | chr8.3:79967040-79967059 | MS.gene39686:CDS | 35.0% | |
CAATGATTCTTGAGACATAG+TGG | + | chr8.3:79966321-79966340 | None:intergenic | 35.0% | |
CATACAACAGGAAAATCTTC+TGG | + | chr8.3:79965947-79965966 | None:intergenic | 35.0% | |
CATGTACATGTGTAGCAAAT+GGG | - | chr8.3:79966704-79966723 | MS.gene39686:intron | 35.0% | |
CCAAACCGTCTAAAAGATAT+GGG | - | chr8.3:79966860-79966879 | MS.gene39686:intron | 35.0% | |
CGAAATATAAAGGCTGTGTT+TGG | - | chr8.3:79966158-79966177 | MS.gene39686:intron | 35.0% | |
CTTTATCATCAATATCTGCG+AGG | + | chr8.3:79965643-79965662 | None:intergenic | 35.0% | |
GAAACAAAAGCTGGTGTAAA+AGG | - | chr8.3:79965515-79965534 | MS.gene39686:CDS | 35.0% | |
GCATTTGATGAAACAAAAGC+TGG | - | chr8.3:79965506-79965525 | MS.gene39686:CDS | 35.0% | |
GGAAATTATGCTTGAAACGA+TGG | + | chr8.3:79966401-79966420 | None:intergenic | 35.0% | |
GTTATGCTTGGTTGTATTAG+TGG | + | chr8.3:79965459-79965478 | None:intergenic | 35.0% | |
GTTCATTGAATGTGGAATCA+AGG | + | chr8.3:79965481-79965500 | None:intergenic | 35.0% | |
TAGTGTTTGATGAGAGGATA+TGG | - | chr8.3:79966237-79966256 | MS.gene39686:intron | 35.0% | |
TCATGTACATGTGTAGCAAA+TGG | - | chr8.3:79966703-79966722 | MS.gene39686:intron | 35.0% | |
TCCAAACCGTCTAAAAGATA+TGG | - | chr8.3:79966859-79966878 | MS.gene39686:intron | 35.0% | |
TCTCCTCAAGAACACTTAAA+GGG | + | chr8.3:79965751-79965770 | None:intergenic | 35.0% | |
TTGGCTATCTCATATTTGTC+TGG | + | chr8.3:79965590-79965609 | None:intergenic | 35.0% | |
! | AACAGGAAAATCTTCTGGTT+TGG | + | chr8.3:79965942-79965961 | None:intergenic | 35.0% |
! | AAGATTTTCCTGTTGTATGC+AGG | - | chr8.3:79965948-79965967 | MS.gene39686:intron | 35.0% |
! | CACAACCCATATCTTTTAGA+CGG | + | chr8.3:79966868-79966887 | None:intergenic | 35.0% |
!! | ACAGGAAAATCTTCTGGTTT+GGG | + | chr8.3:79965941-79965960 | None:intergenic | 35.0% |
!! | CATATTTGTCTGGTTGATGA+TGG | + | chr8.3:79965580-79965599 | None:intergenic | 35.0% |
!!! | TAATGTTGGTGATCTTTTGC+AGG | - | chr8.3:79967075-79967094 | MS.gene39686:CDS | 35.0% |
AAGCATGCAACGGATATTCT+TGG | + | chr8.3:79967239-79967258 | None:intergenic | 40.0% | |
AAGTGTTCTTGAGGAGATGA+AGG | - | chr8.3:79965754-79965773 | MS.gene39686:intron | 40.0% | |
CAAACATACCTGCATACAAC+AGG | + | chr8.3:79965959-79965978 | None:intergenic | 40.0% | |
CAGGACAAGGAGGATAATAA+TGG | + | chr8.3:79966913-79966932 | None:intergenic | 40.0% | |
CTGTGACAATGATTTCCTCA+CGG | - | chr8.3:79966964-79966983 | MS.gene39686:CDS | 40.0% | |
CTTCTACAAGACCATATTGG+TGG | - | chr8.3:79966989-79967008 | MS.gene39686:CDS | 40.0% | |
GATGGAGACAGATGCTAAAA+AGG | - | chr8.3:79965799-79965818 | MS.gene39686:intron | 40.0% | |
GCAGCCTACTTTAATGCAAA+AGG | - | chr8.3:79967365-79967384 | MS.gene39686:CDS | 40.0% | |
GGAAACAGGTGATGAATCTA+GGG | - | chr8.3:79966795-79966814 | MS.gene39686:intron | 40.0% | |
GGATACTTGTACTTGTTCCT+TGG | - | chr8.3:79965904-79965923 | MS.gene39686:intron | 40.0% | |
GGTCTATGACAGGAATAACA+TGG | + | chr8.3:79965622-79965641 | None:intergenic | 40.0% | |
GTGCTTCTACAAGACCATAT+TGG | - | chr8.3:79966986-79967005 | MS.gene39686:CDS | 40.0% | |
TGCTTTGCGTTCATTGAATG+TGG | + | chr8.3:79965489-79965508 | None:intergenic | 40.0% | |
TGTGAAGAGGTTTCATGAGA+TGG | - | chr8.3:79965781-79965800 | MS.gene39686:intron | 40.0% | |
TGTGGAATCAAGGTTATGCT+TGG | + | chr8.3:79965471-79965490 | None:intergenic | 40.0% | |
! | AAAGATATGGGTTGTGCTGA+AGG | - | chr8.3:79966872-79966891 | MS.gene39686:intron | 40.0% |
! | AAGATATGGGTTGTGCTGAA+GGG | - | chr8.3:79966873-79966892 | MS.gene39686:intron | 40.0% |
! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.3:79965698-79965717 | MS.gene39686:intron | 40.0% |
! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.3:79965697-79965716 | MS.gene39686:intron | 40.0% |
! | CCCATATCTTTTAGACGGTT+TGG | + | chr8.3:79966863-79966882 | None:intergenic | 40.0% |
! | GTCACAAAGTTGTCTGGTTT+GGG | - | chr8.3:79966368-79966387 | MS.gene39686:intron | 40.0% |
! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.3:79965696-79965715 | MS.gene39686:intron | 40.0% |
! | TGTGGAGAAAAAGCATGCAA+CGG | + | chr8.3:79967249-79967268 | None:intergenic | 40.0% |
!! | GGTTGATGATGGAATAAGCT+TGG | + | chr8.3:79965569-79965588 | None:intergenic | 40.0% |
!! | GTAAAAGGACTTGTTGATGC+AGG | - | chr8.3:79965530-79965549 | MS.gene39686:CDS | 40.0% |
!!! | TGAAACTTGGGGGTTTTTTC+AGG | - | chr8.3:79965709-79965728 | MS.gene39686:intron | 40.0% |
AATTGACTGTGGGAACAACC+AGG | - | chr8.3:79966939-79966958 | MS.gene39686:CDS | 45.0% | |
ACATTAACTACGAGAGCTCC+AGG | + | chr8.3:79967061-79967080 | None:intergenic | 45.0% | |
AGATGAAGGATGGTGTGAAG+AGG | - | chr8.3:79965768-79965787 | MS.gene39686:intron | 45.0% | |
AGCATGGTCACAAAGTTGTC+TGG | - | chr8.3:79966362-79966381 | MS.gene39686:intron | 45.0% | |
AGGCCATCGTCAAAACTCTA+TGG | - | chr8.3:79967275-79967294 | MS.gene39686:CDS | 45.0% | |
ATAGCTCACCAGCACTCAAT+TGG | - | chr8.3:79965879-79965898 | MS.gene39686:intron | 45.0% | |
ATATCTGCGAGGTCTATGAC+AGG | + | chr8.3:79965632-79965651 | None:intergenic | 45.0% | |
CCTGAACCAGAATTGACTGT+GGG | - | chr8.3:79966929-79966948 | MS.gene39686:CDS | 45.0% | |
GAAATCATTGTCACAGTGCC+TGG | + | chr8.3:79966960-79966979 | None:intergenic | 45.0% | |
GAACTTGGAGACCACCAATA+TGG | + | chr8.3:79967003-79967022 | None:intergenic | 45.0% | |
GGAGCTCTCGTAGTTAATGT+TGG | - | chr8.3:79967061-79967080 | MS.gene39686:CDS | 45.0% | |
GGGAAACAGGTGATGAATCT+AGG | - | chr8.3:79966794-79966813 | MS.gene39686:intron | 45.0% | |
GGTCACAAAGTTGTCTGGTT+TGG | - | chr8.3:79966367-79966386 | MS.gene39686:intron | 45.0% | |
GTGGTTTCTCTGTATTTGGG+AGG | + | chr8.3:79967332-79967351 | None:intergenic | 45.0% | |
GTTCTTGAGGAGATGAAGGA+TGG | - | chr8.3:79965758-79965777 | MS.gene39686:intron | 45.0% | |
GTTGTTCCCACAGTCAATTC+TGG | + | chr8.3:79966938-79966957 | None:intergenic | 45.0% | |
TCCTGAACCAGAATTGACTG+TGG | - | chr8.3:79966928-79966947 | MS.gene39686:CDS | 45.0% | |
! | AGGAAGCATGTGAAACTTGG+GGG | - | chr8.3:79965699-79965718 | MS.gene39686:intron | 45.0% |
!! | AATTCTGGTTCAGGACAAGG+AGG | + | chr8.3:79966923-79966942 | None:intergenic | 45.0% |
!! | ACAAAGTTGTCTGGTTTGGG+TGG | - | chr8.3:79966371-79966390 | MS.gene39686:intron | 45.0% |
!! | GCTTTTTCTCCACAGGTCTT+AGG | - | chr8.3:79967255-79967274 | MS.gene39686:CDS | 45.0% |
!! | GGTCCATAGAGTTTTGACGA+TGG | + | chr8.3:79967281-79967300 | None:intergenic | 45.0% |
!! | GTCAATTCTGGTTCAGGACA+AGG | + | chr8.3:79966926-79966945 | None:intergenic | 45.0% |
!! | TCTTCTGGTTTGGGAGTATC+AGG | + | chr8.3:79965932-79965951 | None:intergenic | 45.0% |
!!! | GTTGCATGCTTTTTCTCCAC+AGG | - | chr8.3:79967248-79967267 | MS.gene39686:CDS | 45.0% |
CTCACCAGCACTCAATTGGA+GGG | - | chr8.3:79965883-79965902 | MS.gene39686:intron | 50.0% | |
GGCTGCAAAATCAGCAACTG+TGG | + | chr8.3:79967351-79967370 | None:intergenic | 50.0% | |
GTATCCCTCCAATTGAGTGC+TGG | + | chr8.3:79965890-79965909 | None:intergenic | 50.0% | |
!! | CCCACAGTCAATTCTGGTTC+AGG | + | chr8.3:79966932-79966951 | None:intergenic | 50.0% |
!! | TTTGGGAGTATCAGGAGCCA+AGG | + | chr8.3:79965924-79965943 | None:intergenic | 50.0% |
ACTACGAGAGCTCCAGGTAC+AGG | + | chr8.3:79967055-79967074 | None:intergenic | 55.0% | |
GCTCACCAGCACTCAATTGG+AGG | - | chr8.3:79965882-79965901 | MS.gene39686:intron | 55.0% | |
TGACGATGGCCTAAGACCTG+TGG | + | chr8.3:79967267-79967286 | None:intergenic | 55.0% | |
!! | GGTCTTGTAGAAGCACCGTG+AGG | + | chr8.3:79966982-79967001 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 79965449 | 79967427 | 79965449 | ID=MS.gene39686 |
chr8.3 | mRNA | 79965449 | 79967427 | 79965449 | ID=MS.gene39686.t1;Parent=MS.gene39686 |
chr8.3 | exon | 79966915 | 79967427 | 79966915 | ID=MS.gene39686.t1.exon1;Parent=MS.gene39686.t1 |
chr8.3 | CDS | 79966915 | 79967427 | 79966915 | ID=cds.MS.gene39686.t1;Parent=MS.gene39686.t1 |
chr8.3 | exon | 79965449 | 79965700 | 79965449 | ID=MS.gene39686.t1.exon2;Parent=MS.gene39686.t1 |
chr8.3 | CDS | 79965449 | 79965700 | 79965449 | ID=cds.MS.gene39686.t1;Parent=MS.gene39686.t1 |
Gene Sequence |
Protein sequence |