Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40014.t1 | XP_003590705.2 | 95.2 | 993 | 46 | 2 | 1 | 992 | 3 | 994 | 0.00E+00 | 1818.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40014.t1 | A4FUF0 | 34.1 | 91 | 56 | 2 | 362 | 452 | 8 | 94 | 1.4e-06 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40014.t1 | G7I2L8 | 95.2 | 993 | 46 | 2 | 1 | 992 | 3 | 994 | 0.0e+00 | 1818.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07741 | MS.gene40014 | PPI |
| MS.gene46640 | MS.gene40014 | PPI |
| MS.gene92710 | MS.gene40014 | PPI |
| MS.gene75575 | MS.gene40014 | PPI |
| MS.gene007196 | MS.gene40014 | PPI |
| MS.gene77911 | MS.gene40014 | PPI |
| MS.gene045235 | MS.gene40014 | PPI |
| MS.gene067033 | MS.gene40014 | PPI |
| MS.gene045232 | MS.gene40014 | PPI |
| MS.gene045233 | MS.gene40014 | PPI |
| MS.gene037044 | MS.gene40014 | PPI |
| MS.gene55120 | MS.gene40014 | PPI |
| MS.gene79130 | MS.gene40014 | PPI |
| MS.gene24697 | MS.gene40014 | PPI |
| MS.gene050299 | MS.gene40014 | PPI |
| MS.gene95527 | MS.gene40014 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40014.t1 | MTR_1g072780 | 95.166 | 993 | 46 | 2 | 1 | 992 | 3 | 994 | 0.0 | 1899 |
| MS.gene40014.t1 | MTR_1g049120 | 54.479 | 681 | 244 | 15 | 353 | 992 | 283 | 938 | 0.0 | 658 |
| MS.gene40014.t1 | MTR_4g036445 | 50.000 | 374 | 160 | 10 | 311 | 667 | 255 | 618 | 3.31e-107 | 347 |
| MS.gene40014.t1 | MTR_2g104120 | 32.339 | 637 | 330 | 17 | 360 | 963 | 258 | 826 | 8.80e-80 | 278 |
| MS.gene40014.t1 | MTR_2g047912 | 43.128 | 422 | 200 | 13 | 555 | 966 | 281 | 672 | 2.00e-78 | 270 |
| MS.gene40014.t1 | MTR_1g066890 | 47.598 | 229 | 99 | 4 | 357 | 583 | 315 | 524 | 9.63e-59 | 218 |
| MS.gene40014.t1 | MTR_1g066890 | 50.538 | 93 | 43 | 1 | 874 | 963 | 810 | 902 | 3.64e-19 | 94.0 |
| MS.gene40014.t1 | MTR_2g104980 | 46.452 | 155 | 57 | 2 | 356 | 505 | 224 | 357 | 9.82e-39 | 151 |
| MS.gene40014.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 360 | 542 | 272 | 453 | 4.97e-29 | 125 |
| MS.gene40014.t1 | MTR_6g005840 | 37.500 | 184 | 112 | 3 | 360 | 542 | 230 | 411 | 7.21e-29 | 125 |
| MS.gene40014.t1 | MTR_6g005960 | 37.500 | 184 | 112 | 3 | 360 | 542 | 212 | 393 | 3.04e-27 | 119 |
| MS.gene40014.t1 | MTR_7g113180 | 33.146 | 178 | 116 | 3 | 360 | 534 | 87 | 264 | 1.18e-24 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40014.t1 | AT3G09670 | 52.604 | 192 | 90 | 1 | 359 | 549 | 196 | 387 | 6.00e-60 | 219 |
| MS.gene40014.t1 | AT3G09670 | 52.604 | 192 | 90 | 1 | 359 | 549 | 196 | 387 | 6.00e-60 | 219 |
| MS.gene40014.t1 | AT5G02950 | 48.148 | 189 | 97 | 1 | 352 | 539 | 87 | 275 | 5.60e-53 | 197 |
| MS.gene40014.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 880 | 961 | 542 | 623 | 1.23e-19 | 94.7 |
| MS.gene40014.t1 | AT5G02950 | 48.148 | 189 | 97 | 1 | 352 | 539 | 87 | 275 | 5.60e-53 | 197 |
| MS.gene40014.t1 | AT5G02950 | 56.098 | 82 | 36 | 0 | 880 | 961 | 542 | 623 | 1.23e-19 | 94.7 |
| MS.gene40014.t1 | AT3G54760 | 35.185 | 324 | 161 | 8 | 663 | 979 | 472 | 753 | 4.18e-42 | 166 |
| MS.gene40014.t1 | AT3G54760 | 35.185 | 324 | 161 | 8 | 663 | 979 | 503 | 784 | 7.61e-42 | 166 |
| MS.gene40014.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 360 | 538 | 125 | 303 | 3.98e-29 | 126 |
| MS.gene40014.t1 | AT5G40340 | 41.209 | 182 | 101 | 6 | 360 | 538 | 125 | 303 | 4.78e-29 | 125 |
| MS.gene40014.t1 | AT5G27650 | 33.880 | 183 | 108 | 4 | 360 | 534 | 171 | 348 | 6.12e-22 | 103 |
| MS.gene40014.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 360 | 471 | 133 | 244 | 1.75e-21 | 101 |
| MS.gene40014.t1 | AT3G05430 | 40.179 | 112 | 67 | 0 | 360 | 471 | 133 | 244 | 1.97e-21 | 101 |
| MS.gene40014.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 357 | 634 | 58 | 329 | 5.67e-19 | 92.8 |
| MS.gene40014.t1 | AT3G27860 | 31.864 | 295 | 161 | 13 | 357 | 634 | 58 | 329 | 5.67e-19 | 92.8 |
| MS.gene40014.t1 | AT3G48187 | 26.702 | 191 | 115 | 5 | 360 | 545 | 106 | 276 | 1.97e-12 | 72.0 |
Find 239 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTTGGTAGCATATTA+TGG | 0.149078 | 1.4:+59569164 | MS.gene40014:CDS |
| GTCAAAAGACGGGTTGAATT+TGG | 0.156607 | 1.4:+59569311 | MS.gene40014:CDS |
| AGCAATAGTCTTTCGTTTCT+TGG | 0.161677 | 1.4:-59569900 | None:intergenic |
| GCTAAACAGTTCAACATATT+TGG | 0.174863 | 1.4:+59570802 | MS.gene40014:CDS |
| TGGAGGAGTTGAAGGGTTTC+AGG | 0.180597 | 1.4:+59568185 | MS.gene40014:CDS |
| GGAGTTTCTTCTCTGATTTC+AGG | 0.181757 | 1.4:+59570281 | MS.gene40014:CDS |
| ACAAAACAATCATTTAAAAT+TGG | 0.214750 | 1.4:+59569995 | MS.gene40014:CDS |
| TTCTGAGTCTCCTCAAAATT+AGG | 0.233682 | 1.4:-59570148 | None:intergenic |
| GGACTTGGTAGTTGGGGTTT+TGG | 0.236358 | 1.4:+59568059 | MS.gene40014:CDS |
| CCCTCTATGTTGAAATATTC+TGG | 0.237737 | 1.4:+59570058 | MS.gene40014:CDS |
| GCTTGCATTCTACCGGTTAA+AGG | 0.242276 | 1.4:+59569559 | MS.gene40014:CDS |
| TTTATCAGTATCATTAATTA+AGG | 0.246050 | 1.4:-59569639 | None:intergenic |
| TTCTGTGAATGATCTGGTTT+GGG | 0.252633 | 1.4:+59569052 | MS.gene40014:CDS |
| TCTGTCTCAGATTCCTTTAA+AGG | 0.257461 | 1.4:-59570706 | None:intergenic |
| GGAGGAGGTAGATGAAATAT+TGG | 0.257832 | 1.4:+59568503 | MS.gene40014:CDS |
| AAAGCCTCCAGTTGGAAAAT+TGG | 0.259834 | 1.4:-59569501 | None:intergenic |
| TATAGTTTCTTGAATGTTAT+AGG | 0.262506 | 1.4:+59570259 | MS.gene40014:CDS |
| CTACAAAAGTTGGCACTAAA+AGG | 0.274187 | 1.4:+59570347 | MS.gene40014:CDS |
| TCACAGGAAGAGAAGGAAAT+TGG | 0.277243 | 1.4:+59568765 | MS.gene40014:CDS |
| TCAGACAAAGAGAAGGAAAT+TGG | 0.297811 | 1.4:+59568921 | MS.gene40014:CDS |
| GCCGATGCGCAAGCTGCTTT+CGG | 0.300794 | 1.4:+59570775 | MS.gene40014:CDS |
| TTCTTCTGCCTTTCACCCTT+GGG | 0.310129 | 1.4:-59569940 | None:intergenic |
| TTTCTTCTGCCTTTCACCCT+TGG | 0.316743 | 1.4:-59569941 | None:intergenic |
| TCATCAAAGTCAAATGTTTC+AGG | 0.317862 | 1.4:-59570394 | None:intergenic |
| ATCATTGTGGCCAGTGATCC+TGG | 0.318358 | 1.4:+59570310 | MS.gene40014:CDS |
| AACATTTGACTTTGATGATC+TGG | 0.323353 | 1.4:+59570399 | MS.gene40014:CDS |
| GATGAGTGATGATGTTATTC+AGG | 0.328343 | 1.4:+59568854 | MS.gene40014:CDS |
| TGTTCCAGGAAACAGTATTT+TGG | 0.330526 | 1.4:+59570544 | MS.gene40014:CDS |
| TGATGAGTGGTGATGTTATT+CGG | 0.331158 | 1.4:+59568694 | MS.gene40014:CDS |
| GAGTTGGATGGAGGGAAAAT+TGG | 0.331559 | 1.4:+59568561 | MS.gene40014:CDS |
| TCTGAGTCTCCTCAAAATTA+GGG | 0.332007 | 1.4:-59570147 | None:intergenic |
| GCTACCAAAATACTGTTTCC+TGG | 0.332567 | 1.4:-59570548 | None:intergenic |
| ACCTCCACAATATTGTAATT+CGG | 0.343928 | 1.4:-59569597 | None:intergenic |
| ATTACAATATTGTGGAGGTT+TGG | 0.350069 | 1.4:+59569601 | MS.gene40014:CDS |
| GCTATTTGGTAGCATATTAT+GGG | 0.350097 | 1.4:+59569165 | MS.gene40014:CDS |
| CCTCCACAATATTGTAATTC+GGG | 0.351991 | 1.4:-59569596 | None:intergenic |
| ATCTTGTCATAAGTATCTTT+AGG | 0.354335 | 1.4:-59569353 | None:intergenic |
| TTATGACAAGATTAAACTTC+AGG | 0.357337 | 1.4:+59569364 | MS.gene40014:CDS |
| TTTCTGTGAATGATCTGGTT+TGG | 0.357507 | 1.4:+59569051 | MS.gene40014:CDS |
| GGTCTAAGCTGAAGTCCTTT+AGG | 0.367030 | 1.4:+59569213 | MS.gene40014:CDS |
| ATAGTTTCTTGAATGTTATA+GGG | 0.367131 | 1.4:+59570260 | MS.gene40014:CDS |
| CAAGTTGTTGGGTCATTAGA+AGG | 0.367450 | 1.4:+59568405 | MS.gene40014:CDS |
| TCAAAAGACGGGTTGAATTT+GGG | 0.368928 | 1.4:+59569312 | MS.gene40014:CDS |
| CATGTCCCCATGAAGAGTTC+AGG | 0.376926 | 1.4:+59569005 | MS.gene40014:CDS |
| TTCAGGGTTCTCAAGCTGTT+GGG | 0.378938 | 1.4:+59568202 | MS.gene40014:CDS |
| AGGTTGAGGGATCTATGGTT+AGG | 0.385375 | 1.4:+59568022 | MS.gene40014:CDS |
| CTGAGAAGGACTTGGTAGTT+GGG | 0.388392 | 1.4:+59568052 | MS.gene40014:CDS |
| TATAGAGGTTGAGGGATCTA+TGG | 0.388781 | 1.4:+59568017 | MS.gene40014:CDS |
| CGAGAATGAGGTAGTTGAGT+TGG | 0.391904 | 1.4:+59568434 | MS.gene40014:CDS |
| AAAGATGTGGGTCTTACTAT+TGG | 0.392531 | 1.4:+59568165 | MS.gene40014:CDS |
| ATAGATCCCTCAACCTCTAT+AGG | 0.393157 | 1.4:-59568015 | None:intergenic |
| CTTGCATTCTACCGGTTAAA+GGG | 0.397273 | 1.4:+59569560 | MS.gene40014:CDS |
| TCCTCCTCCTATAGAGGTTG+AGG | 0.401389 | 1.4:+59568008 | MS.gene40014:CDS |
| AAGTATTCCATAAGCTTCTC+AGG | 0.401659 | 1.4:-59569467 | None:intergenic |
| CTTACTATTGGAGGAGTTGA+AGG | 0.406138 | 1.4:+59568177 | MS.gene40014:CDS |
| TTTCAGGGTTCTCAAGCTGT+TGG | 0.406912 | 1.4:+59568201 | MS.gene40014:CDS |
| TGAGAAGGAGGTAGTTGAGT+TGG | 0.407945 | 1.4:+59568242 | MS.gene40014:CDS |
| TAATCACTGTGGGTAGAATC+TGG | 0.412595 | 1.4:-59569830 | None:intergenic |
| GATGAGTGGTGATGTTATTC+GGG | 0.414067 | 1.4:+59568695 | MS.gene40014:CDS |
| AACTGGAGGCTTTGATCGAT+TGG | 0.414850 | 1.4:+59569511 | MS.gene40014:CDS |
| AGGGTTGCTAGCCAACTTAC+TGG | 0.421445 | 1.4:+59570031 | MS.gene40014:CDS |
| CTTGCGACGGGATTGGTTTG+TGG | 0.423101 | 1.4:-59569738 | None:intergenic |
| AGTTATTGATGGCGAAGAAC+AGG | 0.424524 | 1.4:+59568638 | MS.gene40014:CDS |
| ATTTAATGATGCCGAAGAAC+AGG | 0.424640 | 1.4:+59568953 | MS.gene40014:CDS |
| AGGAGGAGGAGGATTGTCTA+GGG | 0.427731 | 1.4:-59567992 | None:intergenic |
| AAGAAACTATAATCTCCCTT+TGG | 0.428080 | 1.4:-59570247 | None:intergenic |
| AAAATACTGTTTCCTGGAAC+AGG | 0.428323 | 1.4:-59570542 | None:intergenic |
| GAAGGGGCGCGCTCATAGTC+TGG | 0.428448 | 1.4:-59570481 | None:intergenic |
| GAGGAGGAGGAGGATTGTCT+AGG | 0.428538 | 1.4:-59567993 | None:intergenic |
| GGAGACAAAGAAGTTATTGA+TGG | 0.433349 | 1.4:+59568627 | MS.gene40014:CDS |
| AGTTGGTATTTCTGAGAAGA+TGG | 0.434726 | 1.4:+59568737 | MS.gene40014:CDS |
| GGTTGAGGGATCTATGGTTA+GGG | 0.436877 | 1.4:+59568023 | MS.gene40014:CDS |
| TTCGTTTCTTGGAAAGGATA+GGG | 0.437828 | 1.4:-59569889 | None:intergenic |
| AATGATCAAGATGCAATTCC+TGG | 0.437834 | 1.4:-59570903 | None:intergenic |
| AGGACAGATATTTGATCCTT+CGG | 0.441893 | 1.4:+59569103 | MS.gene40014:CDS |
| TTGAAGATTCTCAAGTTGTT+GGG | 0.443017 | 1.4:+59568394 | MS.gene40014:CDS |
| AAAGATGTGACTGTTGCTAT+TGG | 0.443129 | 1.4:+59568357 | MS.gene40014:CDS |
| TGAAGCAACTTTGAAAACAT+TGG | 0.448948 | 1.4:+59568464 | MS.gene40014:CDS |
| CATAAGCTTCTCAGGTGAAA+AGG | 0.450721 | 1.4:-59569459 | None:intergenic |
| TCAGACAAAGAGAAGGAAGT+TGG | 0.451478 | 1.4:+59568606 | MS.gene40014:CDS |
| TTTGAAGATTCTCAAGTTGT+TGG | 0.451500 | 1.4:+59568393 | MS.gene40014:CDS |
| GATTCGACAAGAGCCAAGTT+TGG | 0.453596 | 1.4:+59569403 | MS.gene40014:CDS |
| GAATCTGGATTCCCATTGGC+TGG | 0.453644 | 1.4:-59569815 | None:intergenic |
| GTTTACGCTTGCGACGGGAT+TGG | 0.454998 | 1.4:-59569745 | None:intergenic |
| GGAGGAGTTGAAGGGTTTCA+GGG | 0.455076 | 1.4:+59568186 | MS.gene40014:CDS |
| TGAAGGTAAGAGTGAGAAGG+AGG | 0.456381 | 1.4:+59568230 | MS.gene40014:CDS |
| GATTTCTTTCCCAGGATCAC+TGG | 0.460398 | 1.4:-59570320 | None:intergenic |
| TCCAGAATATTTCAACATAG+AGG | 0.462499 | 1.4:-59570059 | None:intergenic |
| CTACGTGTATAAACATGAAC+AGG | 0.463107 | 1.4:-59570517 | None:intergenic |
| AATGGTGATCAAACTGGAAC+CGG | 0.464649 | 1.4:+59569704 | MS.gene40014:CDS |
| GAGTCAGATGAAGGGAAAGT+TGG | 0.469831 | 1.4:+59568720 | MS.gene40014:CDS |
| AGTTAATGACGCCGATGAAA+AGG | 0.470521 | 1.4:+59568797 | MS.gene40014:CDS |
| AAGTTCAAAACAAGTTCAGC+AGG | 0.470527 | 1.4:-59570622 | None:intergenic |
| AGCAAGAGTAACCCTTTAAC+CGG | 0.471478 | 1.4:-59569571 | None:intergenic |
| TCAGGAGATTCACCTATGGC+TGG | 0.473273 | 1.4:-59570376 | None:intergenic |
| ACTGAGAAGGACTTGGTAGT+TGG | 0.475703 | 1.4:+59568051 | MS.gene40014:CDS |
| GAGAATGAGGTAGTTGAGTT+GGG | 0.475736 | 1.4:+59568435 | MS.gene40014:CDS |
| ATTCAGGTTGAGTCAGATGA+AGG | 0.475737 | 1.4:+59568870 | MS.gene40014:CDS |
| AGAAGCCATCCATGGTGGCC+AGG | 0.480090 | 1.4:+59569083 | MS.gene40014:CDS |
| TGAGAAGATGGATGATTCAC+AGG | 0.480867 | 1.4:+59568749 | MS.gene40014:CDS |
| CTCAGCTGCTTGCATTCTAC+CGG | 0.481107 | 1.4:+59569552 | MS.gene40014:CDS |
| TTCAGGTTGTTGAAAACTGT+GGG | 0.482036 | 1.4:+59569381 | MS.gene40014:CDS |
| TAGTCTTTCGTTTCTTGGAA+AGG | 0.484292 | 1.4:-59569895 | None:intergenic |
| ACCTCTATAGGAGGAGGAGG+AGG | 0.484482 | 1.4:-59568003 | None:intergenic |
| TTCTCATCTATATAACCAGC+AGG | 0.485307 | 1.4:-59570595 | None:intergenic |
| GTTATTTAAGCTTGTTTCTG+AGG | 0.490022 | 1.4:-59570665 | None:intergenic |
| GAAATCTTACCTACAAAAGT+TGG | 0.497550 | 1.4:+59570337 | MS.gene40014:CDS |
| CCTCCTCCTATAGAGGTTGA+GGG | 0.499202 | 1.4:+59568009 | MS.gene40014:CDS |
| ATAAGAGAAATGTGACCTAA+AGG | 0.499413 | 1.4:-59569228 | None:intergenic |
| GGAACGTACGCGTGGAATGA+AGG | 0.499626 | 1.4:+59569191 | MS.gene40014:CDS |
| ATACACGTAGGTCCTGTTCC+AGG | 0.500440 | 1.4:+59570530 | MS.gene40014:CDS |
| ATTCGGGTTGAGTCAGATGA+AGG | 0.500442 | 1.4:+59568711 | MS.gene40014:CDS |
| TTTGATGGGTTAGTTGAGGA+GGG | 0.502003 | 1.4:+59568333 | MS.gene40014:CDS |
| ATCAGTACGCTGACGTCCCA+AGG | 0.502539 | 1.4:+59569924 | MS.gene40014:CDS |
| GATTCTGATTTGTGCATACA+AGG | 0.502676 | 1.4:+59568081 | MS.gene40014:CDS |
| CTCCTCAAAATTAGGGGAGA+AGG | 0.503090 | 1.4:-59570140 | None:intergenic |
| TCTCTGATGGCAGATGGTAA+TGG | 0.503504 | 1.4:+59570088 | MS.gene40014:CDS |
| GACCACATTAAGTTCAACAT+TGG | 0.504411 | 1.4:-59570926 | None:intergenic |
| AAGGAGGTAGTTGAGTTGGA+TGG | 0.505202 | 1.4:+59568246 | MS.gene40014:CDS |
| GATGTGGGTCTTACTATTGG+AGG | 0.505356 | 1.4:+59568168 | MS.gene40014:CDS |
| GCCGAAAGCAGCTTGCGCAT+CGG | 0.506845 | 1.4:-59570776 | None:intergenic |
| ATTATGTTTACGCTTGCGAC+GGG | 0.508564 | 1.4:-59569750 | None:intergenic |
| GTTACTCGGGTTGAGTTGGA+TGG | 0.512140 | 1.4:+59568549 | MS.gene40014:CDS |
| GAGTGCTGTAGATTCTGCTT+TGG | 0.512585 | 1.4:+59569283 | MS.gene40014:CDS |
| CGTAAACATAATCTAAAGGT+TGG | 0.517378 | 1.4:+59569761 | MS.gene40014:CDS |
| ATGTCCCCATGAAGAGTTCA+GGG | 0.518410 | 1.4:+59569006 | MS.gene40014:CDS |
| CAATAAGTGACAATGTTACT+CGG | 0.520556 | 1.4:+59568535 | MS.gene40014:CDS |
| TTTGCTATCTTTACTTCAGT+GGG | 0.521231 | 1.4:+59570213 | MS.gene40014:CDS |
| TTGGTAGCATATTATGGGGA+TGG | 0.521750 | 1.4:+59569170 | MS.gene40014:CDS |
| TCTGTCCTGGCCACCATGGA+TGG | 0.523479 | 1.4:-59569088 | None:intergenic |
| AAGACGGGTTGAATTTGGGC+TGG | 0.526626 | 1.4:+59569316 | MS.gene40014:CDS |
| TTTCGTTTCTTGGAAAGGAT+AGG | 0.527147 | 1.4:-59569890 | None:intergenic |
| ATTTGCTATCTTTACTTCAG+TGG | 0.528385 | 1.4:+59570212 | MS.gene40014:CDS |
| GCAATGGCCTCATCATCATT+CGG | 0.528387 | 1.4:-59569854 | None:intergenic |
| AGGAAGCAAGCGGGCAAGAG+TGG | 0.530153 | 1.4:+59570738 | MS.gene40014:CDS |
| ATGAGGTAGTTGAGTTGGGT+GGG | 0.530499 | 1.4:+59568439 | MS.gene40014:CDS |
| TCAACTCTATGTACCAAACT+TGG | 0.533287 | 1.4:-59569416 | None:intergenic |
| GAACGTACGCGTGGAATGAA+GGG | 0.534286 | 1.4:+59569192 | MS.gene40014:CDS |
| TTATTTAAGCTTGTTTCTGA+GGG | 0.535145 | 1.4:-59570664 | None:intergenic |
| TTTACTTCAGTGGGTAGCAC+AGG | 0.536694 | 1.4:+59570222 | MS.gene40014:CDS |
| CAAGCGTAAACATAATCTAA+AGG | 0.537630 | 1.4:+59569757 | MS.gene40014:CDS |
| GGATGATTCACAGGAAGAGA+AGG | 0.537658 | 1.4:+59568758 | MS.gene40014:CDS |
| GAGTCAGATGAAGGGAAAGT+TGG | 0.538889 | 1.4:+59568879 | MS.gene40014:CDS |
| GTTGCTATTGGAGGAACTGT+AGG | 0.539624 | 1.4:+59568369 | MS.gene40014:CDS |
| CTCGGGTTGAGTTGGATGGA+GGG | 0.541287 | 1.4:+59568553 | MS.gene40014:CDS |
| TGAGCAGAAGAAGAAGGAGG+AGG | 0.542045 | 1.4:+59568488 | MS.gene40014:CDS |
| GTAGGTAAGATTTCTTTCCC+AGG | 0.542544 | 1.4:-59570328 | None:intergenic |
| TGAGAAGGACTTGGTAGTTG+GGG | 0.543115 | 1.4:+59568053 | MS.gene40014:CDS |
| AATGAGGTAGTTGAGTTGGG+TGG | 0.543283 | 1.4:+59568438 | MS.gene40014:CDS |
| CAATGTTACTCGGGTTGAGT+TGG | 0.544154 | 1.4:+59568545 | MS.gene40014:CDS |
| CACTCGGTGAGTAGTTAAGC+TGG | 0.544989 | 1.4:-59570843 | None:intergenic |
| TTGCTATTGGAGGAACTGTA+GGG | 0.545263 | 1.4:+59568370 | MS.gene40014:CDS |
| TCAGGGAAAAGTCGTAGAGA+AGG | 0.545278 | 1.4:+59569023 | MS.gene40014:CDS |
| GAAGGATCAAATATCTGTCC+TGG | 0.546699 | 1.4:-59569101 | None:intergenic |
| TCCTCAAAATTAGGGGAGAA+GGG | 0.547058 | 1.4:-59570139 | None:intergenic |
| TTGCATAAAGATGGTGTTTG+TGG | 0.549648 | 1.4:+59568282 | MS.gene40014:CDS |
| CCCTCAACCTCTATAGGAGG+AGG | 0.551375 | 1.4:-59568009 | None:intergenic |
| GAAAAGGTAAAAGCATCAGC+TGG | 0.551523 | 1.4:+59568813 | MS.gene40014:CDS |
| GGATGATACTGAGAAGGACT+TGG | 0.552752 | 1.4:+59568044 | MS.gene40014:CDS |
| GCTTGTTAGAACCAGCCAAT+GGG | 0.554154 | 1.4:+59569804 | MS.gene40014:CDS |
| TCTAGAGATGAAAACTCTGT+AGG | 0.554887 | 1.4:-59570187 | None:intergenic |
| TTCCAATGTTGAACTTAATG+TGG | 0.555710 | 1.4:+59570924 | MS.gene40014:CDS |
| GGGTTGCTAGCCAACTTACT+GGG | 0.555983 | 1.4:+59570032 | MS.gene40014:CDS |
| AAATTGGCGATTGTATCCGT+AGG | 0.556953 | 1.4:+59570011 | MS.gene40014:CDS |
| TCTGAGACAGAAATTGATAG+AGG | 0.558240 | 1.4:+59570718 | MS.gene40014:CDS |
| AGAAGGTAAGAGCGAGAATG+AGG | 0.560204 | 1.4:+59568422 | MS.gene40014:CDS |
| GAAGCAACGTTGCATAAAGA+TGG | 0.562111 | 1.4:+59568273 | MS.gene40014:CDS |
| TCGTTTCTTGGAAAGGATAG+GGG | 0.562588 | 1.4:-59569888 | None:intergenic |
| GTTGAGGTGAATAACGATGT+TGG | 0.562738 | 1.4:+59568309 | MS.gene40014:CDS |
| CCAGAATATTTCAACATAGA+GGG | 0.564536 | 1.4:-59570058 | None:intergenic |
| GAATGATCTGGTTTGGGGCA+AGG | 0.565852 | 1.4:+59569058 | MS.gene40014:CDS |
| GATGTGACTGTTGCTATTGG+AGG | 0.566838 | 1.4:+59568360 | MS.gene40014:CDS |
| GCTGACGTCCCAAGGGTGAA+AGG | 0.569331 | 1.4:+59569932 | MS.gene40014:CDS |
| TTTCAGGAATTCAATCATTG+TGG | 0.569656 | 1.4:+59570297 | MS.gene40014:CDS |
| TAGAGGGCGACCCAGTAAGT+TGG | 0.571586 | 1.4:-59570042 | None:intergenic |
| GAACAGGCAAAAGCTTCAGA+TGG | 0.571998 | 1.4:+59568654 | MS.gene40014:CDS |
| TTTGGATGAAGTCAAAAGAC+GGG | 0.572094 | 1.4:+59569301 | MS.gene40014:CDS |
| ACTCGGGTTGAGTTGGATGG+AGG | 0.572931 | 1.4:+59568552 | MS.gene40014:CDS |
| GTGGGTAGCACAGGAACCAA+AGG | 0.573631 | 1.4:+59570231 | MS.gene40014:CDS |
| CTTCAGGTTGTTGAAAACTG+TGG | 0.573927 | 1.4:+59569380 | MS.gene40014:CDS |
| ATTGGATGAGCAGAAGAAGA+AGG | 0.575488 | 1.4:+59568482 | MS.gene40014:CDS |
| TGTTTCAGGAGATTCACCTA+TGG | 0.576258 | 1.4:-59570380 | None:intergenic |
| GAACAGGTAAAAGCATCAGA+TGG | 0.576894 | 1.4:+59568969 | MS.gene40014:CDS |
| TTCTGGAGACACTTCTCTGA+TGG | 0.577268 | 1.4:+59570075 | MS.gene40014:CDS |
| TCATTGTGGCCAGTGATCCT+GGG | 0.577427 | 1.4:+59570311 | MS.gene40014:CDS |
| AATTGGCGATTGTATCCGTA+GGG | 0.579455 | 1.4:+59570012 | MS.gene40014:CDS |
| CTTTGGATGAAGTCAAAAGA+CGG | 0.580191 | 1.4:+59569300 | MS.gene40014:CDS |
| TCAACCTCTATAGGAGGAGG+AGG | 0.585327 | 1.4:-59568006 | None:intergenic |
| AATCGATCAAAGCCTCCAGT+TGG | 0.585502 | 1.4:-59569509 | None:intergenic |
| TCCTTCGGATGCATCTGCGC+AGG | 0.588537 | 1.4:+59569118 | MS.gene40014:CDS |
| TTACTATTGGAGGAGTTGAA+GGG | 0.588873 | 1.4:+59568178 | MS.gene40014:CDS |
| TGATGATTCAGACAAAGAGA+AGG | 0.590026 | 1.4:+59568599 | MS.gene40014:CDS |
| AGCTTGTTAGAACCAGCCAA+TGG | 0.592127 | 1.4:+59569803 | MS.gene40014:CDS |
| GATCCCTCAACCTCTATAGG+AGG | 0.592821 | 1.4:-59568012 | None:intergenic |
| GATTGATTCAGACAAAGAGA+AGG | 0.593485 | 1.4:+59568914 | MS.gene40014:CDS |
| CCCGAATTACAATATTGTGG+AGG | 0.595704 | 1.4:+59569596 | MS.gene40014:CDS |
| CAGGGAAAAGTCGTAGAGAA+GGG | 0.596276 | 1.4:+59569024 | MS.gene40014:CDS |
| AATAAGTGACAATGTTACTC+GGG | 0.596344 | 1.4:+59568536 | MS.gene40014:CDS |
| TGCTGAGCTGAATCATGATG+TGG | 0.597423 | 1.4:+59568116 | MS.gene40014:CDS |
| TGGTGTTTGTGGTAGTGTTG+AGG | 0.598048 | 1.4:+59568293 | MS.gene40014:CDS |
| GGTAGAATCTGGATTCCCAT+TGG | 0.599521 | 1.4:-59569819 | None:intergenic |
| GACACTTCTCTGATGGCAGA+TGG | 0.600480 | 1.4:+59570082 | MS.gene40014:CDS |
| TGGGTAGCACAGGAACCAAA+GGG | 0.603458 | 1.4:+59570232 | MS.gene40014:CDS |
| GGTTAGGGATGATACTGAGA+AGG | 0.604612 | 1.4:+59568038 | MS.gene40014:CDS |
| AGTTCAAGAGGATAAAGATG+TGG | 0.609994 | 1.4:+59568152 | MS.gene40014:CDS |
| CTATTTGGTAGCATATTATG+GGG | 0.612060 | 1.4:+59569166 | MS.gene40014:CDS |
| AATTGATAGAGGAAGCAAGC+GGG | 0.613209 | 1.4:+59570729 | MS.gene40014:CDS |
| ATCATTCGGATAATCACTGT+GGG | 0.613540 | 1.4:-59569840 | None:intergenic |
| GCAAGGTGAGAAGCCATCCA+TGG | 0.614983 | 1.4:+59569075 | MS.gene40014:CDS |
| GTTCAAGAGGATAAAGATGT+GGG | 0.615110 | 1.4:+59568153 | MS.gene40014:CDS |
| TTGCCCGAATTACAATATTG+TGG | 0.615408 | 1.4:+59569593 | MS.gene40014:CDS |
| GACACATGTTGCATGCAGAA+TGG | 0.617411 | 1.4:+59570424 | MS.gene40014:CDS |
| GATTATGTTTACGCTTGCGA+CGG | 0.620559 | 1.4:-59569751 | None:intergenic |
| GCCTGCGCAGATGCATCCGA+AGG | 0.622190 | 1.4:-59569119 | None:intergenic |
| ATAAGTATCTTTAGGTACGC+AGG | 0.622403 | 1.4:-59569345 | None:intergenic |
| AAAAGGAAGAAACCAGCCAT+AGG | 0.628089 | 1.4:+59570364 | MS.gene40014:CDS |
| AAGCTTCTCAGGTGAAAAGG+AGG | 0.628731 | 1.4:-59569456 | None:intergenic |
| TTCAGGTTGAGTCAGATGAA+GGG | 0.631536 | 1.4:+59568871 | MS.gene40014:CDS |
| TAAGTTGGCTAGCAACCCTA+CGG | 0.637189 | 1.4:-59570027 | None:intergenic |
| GTTCAAAACAAGTTCAGCAG+GGG | 0.637786 | 1.4:-59570620 | None:intergenic |
| TCAGTACGCTGACGTCCCAA+GGG | 0.638239 | 1.4:+59569925 | MS.gene40014:CDS |
| TTCGGGTTGAGTCAGATGAA+GGG | 0.639871 | 1.4:+59568712 | MS.gene40014:CDS |
| TCTGTGAATGATCTGGTTTG+GGG | 0.640253 | 1.4:+59569053 | MS.gene40014:CDS |
| CTGAGTCTCCTCAAAATTAG+GGG | 0.644036 | 1.4:-59570146 | None:intergenic |
| AATATCTGTCCTGGCCACCA+TGG | 0.644606 | 1.4:-59569092 | None:intergenic |
| ATTGGAGCTTACAACAGCGA+AGG | 0.645925 | 1.4:+59569529 | MS.gene40014:CDS |
| TGATTATCCGAATGATGATG+AGG | 0.647957 | 1.4:+59569847 | MS.gene40014:CDS |
| AGTTCAAAACAAGTTCAGCA+GGG | 0.652707 | 1.4:-59570621 | None:intergenic |
| GAAGCTTTCAACAATGCACT+CGG | 0.655548 | 1.4:-59570859 | None:intergenic |
| ATGGGGATGGAACGTACGCG+TGG | 0.660026 | 1.4:+59569183 | MS.gene40014:CDS |
| CATCATTCGGATAATCACTG+TGG | 0.677313 | 1.4:-59569841 | None:intergenic |
| AAGCAGAATCTACAGCACTC+CGG | 0.679557 | 1.4:-59569280 | None:intergenic |
| GGATGAGCAGAAGAAGAAGG+AGG | 0.687283 | 1.4:+59568485 | MS.gene40014:CDS |
| AGGTGAGAAGCCATCCATGG+TGG | 0.691278 | 1.4:+59569078 | MS.gene40014:CDS |
| GTTGAGAAAGAAGTGATGAG+TGG | 0.695209 | 1.4:+59568681 | MS.gene40014:CDS |
| GCTGAGCTGAATCATGATGT+GGG | 0.707525 | 1.4:+59568117 | MS.gene40014:CDS |
| CTGTTCATGTTTATACACGT+AGG | 0.716902 | 1.4:+59570518 | MS.gene40014:CDS |
| AAATTGATAGAGGAAGCAAG+CGG | 0.720495 | 1.4:+59570728 | MS.gene40014:CDS |
| ATGCAATTCCTGGTCCTGTG+TGG | 0.729902 | 1.4:-59570893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATCAGTATCATTAATTA+AGG | - | chr1.4:59569642-59569661 | None:intergenic | 15.0% |
| !!! | AATAACATTTTTAAGCATTT+TGG | + | chr1.4:59570682-59570701 | MS.gene40014:CDS | 15.0% |
| !!! | AATTTTAAATGATTGTTTTG+TGG | - | chr1.4:59569996-59570015 | None:intergenic | 15.0% |
| !!! | ACAAAACAATCATTTAAAAT+TGG | + | chr1.4:59569995-59570014 | MS.gene40014:CDS | 15.0% |
| !! | ACAATTCATACAAGTAAAAA+TGG | + | chr1.4:59569686-59569705 | MS.gene40014:CDS | 20.0% |
| !! | ATAGTTTCTTGAATGTTATA+GGG | + | chr1.4:59570260-59570279 | MS.gene40014:CDS | 20.0% |
| !! | TATAGTTTCTTGAATGTTAT+AGG | + | chr1.4:59570259-59570278 | MS.gene40014:CDS | 20.0% |
| !! | TATTGAAAAGCAGAAAAATT+TGG | + | chr1.4:59569250-59569269 | MS.gene40014:CDS | 20.0% |
| ! | ATCTTGTCATAAGTATCTTT+AGG | - | chr1.4:59569356-59569375 | None:intergenic | 25.0% |
| ! | TTATGACAAGATTAAACTTC+AGG | + | chr1.4:59569364-59569383 | MS.gene40014:CDS | 25.0% |
| !!! | TTATTTAAGCTTGTTTCTGA+GGG | - | chr1.4:59570667-59570686 | None:intergenic | 25.0% |
| !!! | TTTTAGAAAGAACTGCTATT+TGG | + | chr1.4:59569151-59569170 | MS.gene40014:CDS | 25.0% |
| AAGAAACTATAATCTCCCTT+TGG | - | chr1.4:59570250-59570269 | None:intergenic | 30.0% | |
| AATAAGTGACAATGTTACTC+GGG | + | chr1.4:59568536-59568555 | MS.gene40014:CDS | 30.0% | |
| ACCTCCACAATATTGTAATT+CGG | - | chr1.4:59569600-59569619 | None:intergenic | 30.0% | |
| AGTAAAAATGGTGATCAAAC+TGG | + | chr1.4:59569698-59569717 | MS.gene40014:CDS | 30.0% | |
| ATAAGAGAAATGTGACCTAA+AGG | - | chr1.4:59569231-59569250 | None:intergenic | 30.0% | |
| ATTACAATATTGTGGAGGTT+TGG | + | chr1.4:59569601-59569620 | MS.gene40014:CDS | 30.0% | |
| CAAGCGTAAACATAATCTAA+AGG | + | chr1.4:59569757-59569776 | MS.gene40014:CDS | 30.0% | |
| CAATAAGTGACAATGTTACT+CGG | + | chr1.4:59568535-59568554 | MS.gene40014:CDS | 30.0% | |
| CCAGAATATTTCAACATAGA+GGG | - | chr1.4:59570061-59570080 | None:intergenic | 30.0% | |
| CGTAAACATAATCTAAAGGT+TGG | + | chr1.4:59569761-59569780 | MS.gene40014:CDS | 30.0% | |
| GAAATCTTACCTACAAAAGT+TGG | + | chr1.4:59570337-59570356 | MS.gene40014:CDS | 30.0% | |
| GCTAAACAGTTCAACATATT+TGG | + | chr1.4:59570802-59570821 | MS.gene40014:CDS | 30.0% | |
| TCATCAAAGTCAAATGTTTC+AGG | - | chr1.4:59570397-59570416 | None:intergenic | 30.0% | |
| TCCAGAATATTTCAACATAG+AGG | - | chr1.4:59570062-59570081 | None:intergenic | 30.0% | |
| TTCCAATGTTGAACTTAATG+TGG | + | chr1.4:59570924-59570943 | MS.gene40014:CDS | 30.0% | |
| TTTCAGGAATTCAATCATTG+TGG | + | chr1.4:59570297-59570316 | MS.gene40014:CDS | 30.0% | |
| ! | AACATTTGACTTTGATGATC+TGG | + | chr1.4:59570399-59570418 | MS.gene40014:CDS | 30.0% |
| ! | CTATTTGGTAGCATATTATG+GGG | + | chr1.4:59569166-59569185 | MS.gene40014:CDS | 30.0% |
| ! | GCTATTTGGTAGCATATTAT+GGG | + | chr1.4:59569165-59569184 | MS.gene40014:CDS | 30.0% |
| ! | TAAACATGAACAGGTTTTTC+TGG | - | chr1.4:59570511-59570530 | None:intergenic | 30.0% |
| ! | TAAGCATTTTGGACCTTTAA+AGG | + | chr1.4:59570693-59570712 | MS.gene40014:CDS | 30.0% |
| ! | TGAAGCAACTTTGAAAACAT+TGG | + | chr1.4:59568464-59568483 | MS.gene40014:CDS | 30.0% |
| ! | TGATGCTTTTACCTTTTCAT+CGG | - | chr1.4:59568811-59568830 | None:intergenic | 30.0% |
| ! | TGCTATTTGGTAGCATATTA+TGG | + | chr1.4:59569164-59569183 | MS.gene40014:CDS | 30.0% |
| ! | TTGAAGATTCTCAAGTTGTT+GGG | + | chr1.4:59568394-59568413 | MS.gene40014:CDS | 30.0% |
| ! | TTTGAAGATTCTCAAGTTGT+TGG | + | chr1.4:59568393-59568412 | MS.gene40014:CDS | 30.0% |
| ! | TTTGCTATCTTTACTTCAGT+GGG | + | chr1.4:59570213-59570232 | MS.gene40014:CDS | 30.0% |
| !! | AGAAAAATTTGGAAGTGTTC+CGG | + | chr1.4:59569261-59569280 | MS.gene40014:CDS | 30.0% |
| !! | ATTTGCTATCTTTACTTCAG+TGG | + | chr1.4:59570212-59570231 | MS.gene40014:CDS | 30.0% |
| !! | GTTATTTAAGCTTGTTTCTG+AGG | - | chr1.4:59570668-59570687 | None:intergenic | 30.0% |
| !!! | AATAACGATGTTGGTTTTGA+TGG | + | chr1.4:59568318-59568337 | MS.gene40014:CDS | 30.0% |
| !!! | ATAACGATGTTGGTTTTGAT+GGG | + | chr1.4:59568319-59568338 | MS.gene40014:CDS | 30.0% |
| AAAATACTGTTTCCTGGAAC+AGG | - | chr1.4:59570545-59570564 | None:intergenic | 35.0% | |
| AAAGATGTGACTGTTGCTAT+TGG | + | chr1.4:59568357-59568376 | MS.gene40014:CDS | 35.0% | |
| AAAGATGTGGGTCTTACTAT+TGG | + | chr1.4:59568165-59568184 | MS.gene40014:CDS | 35.0% | |
| AAATTGATAGAGGAAGCAAG+CGG | + | chr1.4:59570728-59570747 | MS.gene40014:CDS | 35.0% | |
| AAGTATTCCATAAGCTTCTC+AGG | - | chr1.4:59569470-59569489 | None:intergenic | 35.0% | |
| AAGTTCAAAACAAGTTCAGC+AGG | - | chr1.4:59570625-59570644 | None:intergenic | 35.0% | |
| AATGATCAAGATGCAATTCC+TGG | - | chr1.4:59570906-59570925 | None:intergenic | 35.0% | |
| AGCAATAGTCTTTCGTTTCT+TGG | - | chr1.4:59569903-59569922 | None:intergenic | 35.0% | |
| AGGACAGATATTTGATCCTT+CGG | + | chr1.4:59569103-59569122 | MS.gene40014:CDS | 35.0% | |
| AGGGGAAAAAAGATTAGCAA+TGG | - | chr1.4:59569873-59569892 | None:intergenic | 35.0% | |
| AGTTCAAAACAAGTTCAGCA+GGG | - | chr1.4:59570624-59570643 | None:intergenic | 35.0% | |
| AGTTCAAGAGGATAAAGATG+TGG | + | chr1.4:59568152-59568171 | MS.gene40014:CDS | 35.0% | |
| ATAAGTATCTTTAGGTACGC+AGG | - | chr1.4:59569348-59569367 | None:intergenic | 35.0% | |
| ATCATTCGGATAATCACTGT+GGG | - | chr1.4:59569843-59569862 | None:intergenic | 35.0% | |
| ATTTAATGATGCCGAAGAAC+AGG | + | chr1.4:59568953-59568972 | MS.gene40014:CDS | 35.0% | |
| CCCTCTATGTTGAAATATTC+TGG | + | chr1.4:59570058-59570077 | MS.gene40014:CDS | 35.0% | |
| CCTCCACAATATTGTAATTC+GGG | - | chr1.4:59569599-59569618 | None:intergenic | 35.0% | |
| CTACAAAAGTTGGCACTAAA+AGG | + | chr1.4:59570347-59570366 | MS.gene40014:CDS | 35.0% | |
| CTACGTGTATAAACATGAAC+AGG | - | chr1.4:59570520-59570539 | None:intergenic | 35.0% | |
| CTGTTCATGTTTATACACGT+AGG | + | chr1.4:59570518-59570537 | MS.gene40014:CDS | 35.0% | |
| CTTTGGATGAAGTCAAAAGA+CGG | + | chr1.4:59569300-59569319 | MS.gene40014:CDS | 35.0% | |
| GACCACATTAAGTTCAACAT+TGG | - | chr1.4:59570929-59570948 | None:intergenic | 35.0% | |
| GGAGACAAAGAAGTTATTGA+TGG | + | chr1.4:59568627-59568646 | MS.gene40014:CDS | 35.0% | |
| GTTCAAGAGGATAAAGATGT+GGG | + | chr1.4:59568153-59568172 | MS.gene40014:CDS | 35.0% | |
| TAGTCTTTCGTTTCTTGGAA+AGG | - | chr1.4:59569898-59569917 | None:intergenic | 35.0% | |
| TCAACTCTATGTACCAAACT+TGG | - | chr1.4:59569419-59569438 | None:intergenic | 35.0% | |
| TCAGACAAAGAGAAGGAAAT+TGG | + | chr1.4:59568921-59568940 | MS.gene40014:CDS | 35.0% | |
| TCTAGAGATGAAAACTCTGT+AGG | - | chr1.4:59570190-59570209 | None:intergenic | 35.0% | |
| TCTGAGTCTCCTCAAAATTA+GGG | - | chr1.4:59570150-59570169 | None:intergenic | 35.0% | |
| TCTGTCTCAGATTCCTTTAA+AGG | - | chr1.4:59570709-59570728 | None:intergenic | 35.0% | |
| TGATGATTCAGACAAAGAGA+AGG | + | chr1.4:59568599-59568618 | MS.gene40014:CDS | 35.0% | |
| TTACTATTGGAGGAGTTGAA+GGG | + | chr1.4:59568178-59568197 | MS.gene40014:CDS | 35.0% | |
| TTCGTTTCTTGGAAAGGATA+GGG | - | chr1.4:59569892-59569911 | None:intergenic | 35.0% | |
| TTCTCATCTATATAACCAGC+AGG | - | chr1.4:59570598-59570617 | None:intergenic | 35.0% | |
| TTCTGAGTCTCCTCAAAATT+AGG | - | chr1.4:59570151-59570170 | None:intergenic | 35.0% | |
| TTGCATAAAGATGGTGTTTG+TGG | + | chr1.4:59568282-59568301 | MS.gene40014:CDS | 35.0% | |
| TTGCCCGAATTACAATATTG+TGG | + | chr1.4:59569593-59569612 | MS.gene40014:CDS | 35.0% | |
| TTTCGTTTCTTGGAAAGGAT+AGG | - | chr1.4:59569893-59569912 | None:intergenic | 35.0% | |
| TTTCTGTGAATGATCTGGTT+TGG | + | chr1.4:59569051-59569070 | MS.gene40014:CDS | 35.0% | |
| TTTGGATGAAGTCAAAAGAC+GGG | + | chr1.4:59569301-59569320 | MS.gene40014:CDS | 35.0% | |
| ! | AGTTGGTATTTCTGAGAAGA+TGG | + | chr1.4:59568737-59568756 | MS.gene40014:CDS | 35.0% |
| ! | ATATAACCAGCAGGTTTTTC+AGG | - | chr1.4:59570589-59570608 | None:intergenic | 35.0% |
| ! | CTTTTAGTGCCAACTTTTGT+AGG | - | chr1.4:59570349-59570368 | None:intergenic | 35.0% |
| ! | GAAGTTTTCTGTGAATGATC+TGG | + | chr1.4:59569046-59569065 | MS.gene40014:CDS | 35.0% |
| ! | GATGAGTGATGATGTTATTC+AGG | + | chr1.4:59568854-59568873 | MS.gene40014:CDS | 35.0% |
| ! | GATTCTGATTTGTGCATACA+AGG | + | chr1.4:59568081-59568100 | MS.gene40014:CDS | 35.0% |
| ! | GATTGATTCAGACAAAGAGA+AGG | + | chr1.4:59568914-59568933 | MS.gene40014:CDS | 35.0% |
| ! | GCTTTATCCAATTTTCCAAC+TGG | + | chr1.4:59569494-59569513 | MS.gene40014:CDS | 35.0% |
| ! | TCTGAGACAGAAATTGATAG+AGG | + | chr1.4:59570718-59570737 | MS.gene40014:CDS | 35.0% |
| ! | TGATGAGTGGTGATGTTATT+CGG | + | chr1.4:59568694-59568713 | MS.gene40014:CDS | 35.0% |
| ! | TGATGCTTTTACCTGTTCTT+CGG | - | chr1.4:59568967-59568986 | None:intergenic | 35.0% |
| ! | TGATTATCCGAATGATGATG+AGG | + | chr1.4:59569847-59569866 | MS.gene40014:CDS | 35.0% |
| ! | TGTTCCAGGAAACAGTATTT+TGG | + | chr1.4:59570544-59570563 | MS.gene40014:CDS | 35.0% |
| ! | TTATCCAATTTTCCAACTGG+AGG | + | chr1.4:59569497-59569516 | MS.gene40014:CDS | 35.0% |
| ! | TTCTGTGAATGATCTGGTTT+GGG | + | chr1.4:59569052-59569071 | MS.gene40014:CDS | 35.0% |
| !! | AATCATGATGTGGGTTTTGA+TGG | + | chr1.4:59568126-59568145 | MS.gene40014:CDS | 35.0% |
| !! | ATCATGATGTGGGTTTTGAT+GGG | + | chr1.4:59568127-59568146 | MS.gene40014:CDS | 35.0% |
| !! | TCAAAAGACGGGTTGAATTT+GGG | + | chr1.4:59569312-59569331 | MS.gene40014:CDS | 35.0% |
| !! | TGTTTTGAACTTTGCTGACT+TGG | + | chr1.4:59570633-59570652 | MS.gene40014:CDS | 35.0% |
| !! | TTCAGGTTGTTGAAAACTGT+GGG | + | chr1.4:59569381-59569400 | MS.gene40014:CDS | 35.0% |
| !! | TTTTGAAGGTAAGAGTGAGA+AGG | + | chr1.4:59568227-59568246 | MS.gene40014:CDS | 35.0% |
| AAAAGGAAGAAACCAGCCAT+AGG | + | chr1.4:59570364-59570383 | MS.gene40014:CDS | 40.0% | |
| AAAGCCTCCAGTTGGAAAAT+TGG | - | chr1.4:59569504-59569523 | None:intergenic | 40.0% | |
| AAATTGGCGATTGTATCCGT+AGG | + | chr1.4:59570011-59570030 | MS.gene40014:CDS | 40.0% | |
| AATGGTGATCAAACTGGAAC+CGG | + | chr1.4:59569704-59569723 | MS.gene40014:CDS | 40.0% | |
| AATTGATAGAGGAAGCAAGC+GGG | + | chr1.4:59570729-59570748 | MS.gene40014:CDS | 40.0% | |
| AATTGGCGATTGTATCCGTA+GGG | + | chr1.4:59570012-59570031 | MS.gene40014:CDS | 40.0% | |
| AGCAAGAGTAACCCTTTAAC+CGG | - | chr1.4:59569574-59569593 | None:intergenic | 40.0% | |
| AGTTAATGACGCCGATGAAA+AGG | + | chr1.4:59568797-59568816 | MS.gene40014:CDS | 40.0% | |
| ATAGATCCCTCAACCTCTAT+AGG | - | chr1.4:59568018-59568037 | None:intergenic | 40.0% | |
| ATTATGTTTACGCTTGCGAC+GGG | - | chr1.4:59569753-59569772 | None:intergenic | 40.0% | |
| ATTGGATGAGCAGAAGAAGA+AGG | + | chr1.4:59568482-59568501 | MS.gene40014:CDS | 40.0% | |
| CAAGTTGTTGGGTCATTAGA+AGG | + | chr1.4:59568405-59568424 | MS.gene40014:CDS | 40.0% | |
| CATAAGCTTCTCAGGTGAAA+AGG | - | chr1.4:59569462-59569481 | None:intergenic | 40.0% | |
| CATCATTCGGATAATCACTG+TGG | - | chr1.4:59569844-59569863 | None:intergenic | 40.0% | |
| CCCGAATTACAATATTGTGG+AGG | + | chr1.4:59569596-59569615 | MS.gene40014:CDS | 40.0% | |
| CTGAGTCTCCTCAAAATTAG+GGG | - | chr1.4:59570149-59570168 | None:intergenic | 40.0% | |
| CTTACTATTGGAGGAGTTGA+AGG | + | chr1.4:59568177-59568196 | MS.gene40014:CDS | 40.0% | |
| GAAGCAACGTTGCATAAAGA+TGG | + | chr1.4:59568273-59568292 | MS.gene40014:CDS | 40.0% | |
| GAAGCTTTCAACAATGCACT+CGG | - | chr1.4:59570862-59570881 | None:intergenic | 40.0% | |
| GAAGGATCAAATATCTGTCC+TGG | - | chr1.4:59569104-59569123 | None:intergenic | 40.0% | |
| GAGAATGAGGTAGTTGAGTT+GGG | + | chr1.4:59568435-59568454 | MS.gene40014:CDS | 40.0% | |
| GATTATGTTTACGCTTGCGA+CGG | - | chr1.4:59569754-59569773 | None:intergenic | 40.0% | |
| GCTACCAAAATACTGTTTCC+TGG | - | chr1.4:59570551-59570570 | None:intergenic | 40.0% | |
| GGAGGAGGTAGATGAAATAT+TGG | + | chr1.4:59568503-59568522 | MS.gene40014:CDS | 40.0% | |
| GGAGTTTCTTCTCTGATTTC+AGG | + | chr1.4:59570281-59570300 | MS.gene40014:CDS | 40.0% | |
| GTAGGTAAGATTTCTTTCCC+AGG | - | chr1.4:59570331-59570350 | None:intergenic | 40.0% | |
| GTTCAAAACAAGTTCAGCAG+GGG | - | chr1.4:59570623-59570642 | None:intergenic | 40.0% | |
| GTTGAGAAAGAAGTGATGAG+TGG | + | chr1.4:59568681-59568700 | MS.gene40014:CDS | 40.0% | |
| GTTGAGGTGAATAACGATGT+TGG | + | chr1.4:59568309-59568328 | MS.gene40014:CDS | 40.0% | |
| TAATCACTGTGGGTAGAATC+TGG | - | chr1.4:59569833-59569852 | None:intergenic | 40.0% | |
| TATAGAGGTTGAGGGATCTA+TGG | + | chr1.4:59568017-59568036 | MS.gene40014:CDS | 40.0% | |
| TCACAGGAAGAGAAGGAAAT+TGG | + | chr1.4:59568765-59568784 | MS.gene40014:CDS | 40.0% | |
| TCAGACAAAGAGAAGGAAGT+TGG | + | chr1.4:59568606-59568625 | MS.gene40014:CDS | 40.0% | |
| TCCTCAAAATTAGGGGAGAA+GGG | - | chr1.4:59570142-59570161 | None:intergenic | 40.0% | |
| TCGTTTCTTGGAAAGGATAG+GGG | - | chr1.4:59569891-59569910 | None:intergenic | 40.0% | |
| TGAGAAGATGGATGATTCAC+AGG | + | chr1.4:59568749-59568768 | MS.gene40014:CDS | 40.0% | |
| TGTTTCAGGAGATTCACCTA+TGG | - | chr1.4:59570383-59570402 | None:intergenic | 40.0% | |
| ! | ACTTTTCCCTGAACTCTTCA+TGG | - | chr1.4:59569015-59569034 | None:intergenic | 40.0% |
| ! | CTTGCATTCTACCGGTTAAA+GGG | + | chr1.4:59569560-59569579 | MS.gene40014:CDS | 40.0% |
| ! | CTTTTCACCTGAGAAGCTTA+TGG | + | chr1.4:59569460-59569479 | MS.gene40014:CDS | 40.0% |
| ! | CTTTTCCCTGAACTCTTCAT+GGG | - | chr1.4:59569014-59569033 | None:intergenic | 40.0% |
| ! | GATGAGTGGTGATGTTATTC+GGG | + | chr1.4:59568695-59568714 | MS.gene40014:CDS | 40.0% |
| ! | GGTGCTTGAACTTTTCTCAA+GGG | - | chr1.4:59569975-59569994 | None:intergenic | 40.0% |
| ! | GTTTGTGGCTTTTGAATCTC+CGG | - | chr1.4:59569726-59569745 | None:intergenic | 40.0% |
| ! | TCTGTGAATGATCTGGTTTG+GGG | + | chr1.4:59569053-59569072 | MS.gene40014:CDS | 40.0% |
| ! | TGGTGCTTGAACTTTTCTCA+AGG | - | chr1.4:59569976-59569995 | None:intergenic | 40.0% |
| ! | TTCATCTTTTGCTACCACAC+AGG | + | chr1.4:59570879-59570898 | MS.gene40014:CDS | 40.0% |
| ! | TTGCTATTGGAGGAACTGTA+GGG | + | chr1.4:59568370-59568389 | MS.gene40014:CDS | 40.0% |
| ! | TTGGTAGCATATTATGGGGA+TGG | + | chr1.4:59569170-59569189 | MS.gene40014:CDS | 40.0% |
| ! | TTTTCCCTGAACTCTTCATG+GGG | - | chr1.4:59569013-59569032 | None:intergenic | 40.0% |
| !! | AGTTATTGATGGCGAAGAAC+AGG | + | chr1.4:59568638-59568657 | MS.gene40014:CDS | 40.0% |
| !! | ATTCAGGTTGAGTCAGATGA+AGG | + | chr1.4:59568870-59568889 | MS.gene40014:CDS | 40.0% |
| !! | CTTCAGGTTGTTGAAAACTG+TGG | + | chr1.4:59569380-59569399 | MS.gene40014:CDS | 40.0% |
| !! | GAAAAGGTAAAAGCATCAGC+TGG | + | chr1.4:59568813-59568832 | MS.gene40014:CDS | 40.0% |
| !! | GAACAGGTAAAAGCATCAGA+TGG | + | chr1.4:59568969-59568988 | MS.gene40014:CDS | 40.0% |
| !! | GTCAAAAGACGGGTTGAATT+TGG | + | chr1.4:59569311-59569330 | MS.gene40014:CDS | 40.0% |
| !! | TTCAGGTTGAGTCAGATGAA+GGG | + | chr1.4:59568871-59568890 | MS.gene40014:CDS | 40.0% |
| !! | TTTGATGGGTTAGTTGAGGA+GGG | + | chr1.4:59568333-59568352 | MS.gene40014:CDS | 40.0% |
| !! | TTTTGATGGGTCAGTTCAAG+AGG | + | chr1.4:59568140-59568159 | MS.gene40014:CDS | 40.0% |
| !!! | TGGTTTTGATGGGTTAGTTG+AGG | + | chr1.4:59568329-59568348 | MS.gene40014:CDS | 40.0% |
| !!! | TTTTGATGGGTTAGTTGAGG+AGG | + | chr1.4:59568332-59568351 | MS.gene40014:CDS | 40.0% |
| AAGCAGAATCTACAGCACTC+CGG | - | chr1.4:59569283-59569302 | None:intergenic | 45.0% | |
| AAGCTTCTCAGGTGAAAAGG+AGG | - | chr1.4:59569459-59569478 | None:intergenic | 45.0% | |
| AATCGATCAAAGCCTCCAGT+TGG | - | chr1.4:59569512-59569531 | None:intergenic | 45.0% | |
| AGAAGGTAAGAGCGAGAATG+AGG | + | chr1.4:59568422-59568441 | MS.gene40014:CDS | 45.0% | |
| AGGTTGAGGGATCTATGGTT+AGG | + | chr1.4:59568022-59568041 | MS.gene40014:CDS | 45.0% | |
| ATGTCCCCATGAAGAGTTCA+GGG | + | chr1.4:59569006-59569025 | MS.gene40014:CDS | 45.0% | |
| ATTGGAGCTTACAACAGCGA+AGG | + | chr1.4:59569529-59569548 | MS.gene40014:CDS | 45.0% | |
| CAGGGAAAAGTCGTAGAGAA+GGG | + | chr1.4:59569024-59569043 | MS.gene40014:CDS | 45.0% | |
| CGAGAATGAGGTAGTTGAGT+TGG | + | chr1.4:59568434-59568453 | MS.gene40014:CDS | 45.0% | |
| CTCCTCAAAATTAGGGGAGA+AGG | - | chr1.4:59570143-59570162 | None:intergenic | 45.0% | |
| GAACAGGCAAAAGCTTCAGA+TGG | + | chr1.4:59568654-59568673 | MS.gene40014:CDS | 45.0% | |
| GACACATGTTGCATGCAGAA+TGG | + | chr1.4:59570424-59570443 | MS.gene40014:CDS | 45.0% | |
| GAGTCAGATGAAGGGAAAGT+TGG | + | chr1.4:59568720-59568739 | MS.gene40014:CDS | 45.0% | |
| GAGTTGGATGGAGGGAAAAT+TGG | + | chr1.4:59568561-59568580 | MS.gene40014:CDS | 45.0% | |
| GATGTGGGTCTTACTATTGG+AGG | + | chr1.4:59568168-59568187 | MS.gene40014:CDS | 45.0% | |
| GATTCGACAAGAGCCAAGTT+TGG | + | chr1.4:59569403-59569422 | MS.gene40014:CDS | 45.0% | |
| GATTTCTTTCCCAGGATCAC+TGG | - | chr1.4:59570323-59570342 | None:intergenic | 45.0% | |
| GCAATGGCCTCATCATCATT+CGG | - | chr1.4:59569857-59569876 | None:intergenic | 45.0% | |
| GCTGAGCTGAATCATGATGT+GGG | + | chr1.4:59568117-59568136 | MS.gene40014:CDS | 45.0% | |
| GGATGATACTGAGAAGGACT+TGG | + | chr1.4:59568044-59568063 | MS.gene40014:CDS | 45.0% | |
| GGATGATTCACAGGAAGAGA+AGG | + | chr1.4:59568758-59568777 | MS.gene40014:CDS | 45.0% | |
| GGTAGAATCTGGATTCCCAT+TGG | - | chr1.4:59569822-59569841 | None:intergenic | 45.0% | |
| GGTCTAAGCTGAAGTCCTTT+AGG | + | chr1.4:59569213-59569232 | MS.gene40014:CDS | 45.0% | |
| GGTTAGGGATGATACTGAGA+AGG | + | chr1.4:59568038-59568057 | MS.gene40014:CDS | 45.0% | |
| GGTTGAGGGATCTATGGTTA+GGG | + | chr1.4:59568023-59568042 | MS.gene40014:CDS | 45.0% | |
| TCAGGGAAAAGTCGTAGAGA+AGG | + | chr1.4:59569023-59569042 | MS.gene40014:CDS | 45.0% | |
| TCTCTGATGGCAGATGGTAA+TGG | + | chr1.4:59570088-59570107 | MS.gene40014:CDS | 45.0% | |
| TGAAGGTAAGAGTGAGAAGG+AGG | + | chr1.4:59568230-59568249 | MS.gene40014:CDS | 45.0% | |
| TGAGAAGGAGGTAGTTGAGT+TGG | + | chr1.4:59568242-59568261 | MS.gene40014:CDS | 45.0% | |
| TGCTGAGCTGAATCATGATG+TGG | + | chr1.4:59568116-59568135 | MS.gene40014:CDS | 45.0% | |
| TTCAGGGTTCTCAAGCTGTT+GGG | + | chr1.4:59568202-59568221 | MS.gene40014:CDS | 45.0% | |
| TTCTTCTGCCTTTCACCCTT+GGG | - | chr1.4:59569943-59569962 | None:intergenic | 45.0% | |
| TTTACTTCAGTGGGTAGCAC+AGG | + | chr1.4:59570222-59570241 | MS.gene40014:CDS | 45.0% | |
| TTTCAGGGTTCTCAAGCTGT+TGG | + | chr1.4:59568201-59568220 | MS.gene40014:CDS | 45.0% | |
| TTTCTTCTGCCTTTCACCCT+TGG | - | chr1.4:59569944-59569963 | None:intergenic | 45.0% | |
| ! | AACTGGAGGCTTTGATCGAT+TGG | + | chr1.4:59569511-59569530 | MS.gene40014:CDS | 45.0% |
| ! | ACTGAGAAGGACTTGGTAGT+TGG | + | chr1.4:59568051-59568070 | MS.gene40014:CDS | 45.0% |
| ! | CAAGCTGTTGGGTCTTTTGA+AGG | + | chr1.4:59568213-59568232 | MS.gene40014:CDS | 45.0% |
| ! | CTGAGAAGGACTTGGTAGTT+GGG | + | chr1.4:59568052-59568071 | MS.gene40014:CDS | 45.0% |
| ! | GAGTGCTGTAGATTCTGCTT+TGG | + | chr1.4:59569283-59569302 | MS.gene40014:CDS | 45.0% |
| ! | GATGTGACTGTTGCTATTGG+AGG | + | chr1.4:59568360-59568379 | MS.gene40014:CDS | 45.0% |
| ! | GCTTGCATTCTACCGGTTAA+AGG | + | chr1.4:59569559-59569578 | MS.gene40014:CDS | 45.0% |
| ! | GCTTGTTAGAACCAGCCAAT+GGG | + | chr1.4:59569804-59569823 | MS.gene40014:CDS | 45.0% |
| ! | GTTGCTATTGGAGGAACTGT+AGG | + | chr1.4:59568369-59568388 | MS.gene40014:CDS | 45.0% |
| ! | TAAGTTGGCTAGCAACCCTA+CGG | - | chr1.4:59570030-59570049 | None:intergenic | 45.0% |
| ! | TCCCTTCTCCCCTAATTTTG+AGG | + | chr1.4:59570138-59570157 | MS.gene40014:CDS | 45.0% |
| ! | TGAGAAGGACTTGGTAGTTG+GGG | + | chr1.4:59568053-59568072 | MS.gene40014:CDS | 45.0% |
| ! | TGGTGTTTGTGGTAGTGTTG+AGG | + | chr1.4:59568293-59568312 | MS.gene40014:CDS | 45.0% |
| ! | TTCTGGAGACACTTCTCTGA+TGG | + | chr1.4:59570075-59570094 | MS.gene40014:CDS | 45.0% |
| !! | AAGGAGGTAGTTGAGTTGGA+TGG | + | chr1.4:59568246-59568265 | MS.gene40014:CDS | 45.0% |
| !! | AATGAGGTAGTTGAGTTGGG+TGG | + | chr1.4:59568438-59568457 | MS.gene40014:CDS | 45.0% |
| !! | AGCTTGTTAGAACCAGCCAA+TGG | + | chr1.4:59569803-59569822 | MS.gene40014:CDS | 45.0% |
| !! | ATGAGGTAGTTGAGTTGGGT+GGG | + | chr1.4:59568439-59568458 | MS.gene40014:CDS | 45.0% |
| !! | ATTCGGGTTGAGTCAGATGA+AGG | + | chr1.4:59568711-59568730 | MS.gene40014:CDS | 45.0% |
| !! | CAATGTTACTCGGGTTGAGT+TGG | + | chr1.4:59568545-59568564 | MS.gene40014:CDS | 45.0% |
| !! | TTCGGGTTGAGTCAGATGAA+GGG | + | chr1.4:59568712-59568731 | MS.gene40014:CDS | 45.0% |
| !! | TTTTGGTAGCAATCACGCTG+AGG | + | chr1.4:59570561-59570580 | MS.gene40014:CDS | 45.0% |
| !!! | ACAGGTTTTTCTGGCTCAGA+AGG | - | chr1.4:59570502-59570521 | None:intergenic | 45.0% |
| !!! | AGGTTTTTCTGGCTCAGAAG+GGG | - | chr1.4:59570500-59570519 | None:intergenic | 45.0% |
| !!! | CAGGTTTTTCTGGCTCAGAA+GGG | - | chr1.4:59570501-59570520 | None:intergenic | 45.0% |
| AATATCTGTCCTGGCCACCA+TGG | - | chr1.4:59569095-59569114 | None:intergenic | 50.0% | |
| AGGAGGAGGAGGATTGTCTA+GGG | - | chr1.4:59567995-59568014 | None:intergenic | 50.0% | |
| AGGGTTGCTAGCCAACTTAC+TGG | + | chr1.4:59570031-59570050 | MS.gene40014:CDS | 50.0% | |
| ATACACGTAGGTCCTGTTCC+AGG | + | chr1.4:59570530-59570549 | MS.gene40014:CDS | 50.0% | |
| ATCATTGTGGCCAGTGATCC+TGG | + | chr1.4:59570310-59570329 | MS.gene40014:CDS | 50.0% | |
| ATGCAATTCCTGGTCCTGTG+TGG | - | chr1.4:59570896-59570915 | None:intergenic | 50.0% | |
| CATGTCCCCATGAAGAGTTC+AGG | + | chr1.4:59569005-59569024 | MS.gene40014:CDS | 50.0% | |
| CCTCCTCCTATAGAGGTTGA+GGG | + | chr1.4:59568009-59568028 | MS.gene40014:CDS | 50.0% | |
| CTCAGCTGCTTGCATTCTAC+CGG | + | chr1.4:59569552-59569571 | MS.gene40014:CDS | 50.0% | |
| GAACGTACGCGTGGAATGAA+GGG | + | chr1.4:59569192-59569211 | MS.gene40014:CDS | 50.0% | |
| GAATCTGGATTCCCATTGGC+TGG | - | chr1.4:59569818-59569837 | None:intergenic | 50.0% | |
| GACACTTCTCTGATGGCAGA+TGG | + | chr1.4:59570082-59570101 | MS.gene40014:CDS | 50.0% | |
| GAGGTTCCTGAAAAACCTGC+TGG | + | chr1.4:59570580-59570599 | MS.gene40014:CDS | 50.0% | |
| GATCCCTCAACCTCTATAGG+AGG | - | chr1.4:59568015-59568034 | None:intergenic | 50.0% | |
| GGAGGAGTTGAAGGGTTTCA+GGG | + | chr1.4:59568186-59568205 | MS.gene40014:CDS | 50.0% | |
| GGATGAGCAGAAGAAGAAGG+AGG | + | chr1.4:59568485-59568504 | MS.gene40014:CDS | 50.0% | |
| GGGTTGCTAGCCAACTTACT+GGG | + | chr1.4:59570032-59570051 | MS.gene40014:CDS | 50.0% | |
| TCAACCTCTATAGGAGGAGG+AGG | - | chr1.4:59568009-59568028 | None:intergenic | 50.0% | |
| TCAGGAGATTCACCTATGGC+TGG | - | chr1.4:59570379-59570398 | None:intergenic | 50.0% | |
| TCATTGTGGCCAGTGATCCT+GGG | + | chr1.4:59570311-59570330 | MS.gene40014:CDS | 50.0% | |
| TCCTCCTCCTATAGAGGTTG+AGG | + | chr1.4:59568008-59568027 | MS.gene40014:CDS | 50.0% | |
| TGAGCAGAAGAAGAAGGAGG+AGG | + | chr1.4:59568488-59568507 | MS.gene40014:CDS | 50.0% | |
| TGGAGGAGTTGAAGGGTTTC+AGG | + | chr1.4:59568185-59568204 | MS.gene40014:CDS | 50.0% | |
| TGGGTAGCACAGGAACCAAA+GGG | + | chr1.4:59570232-59570251 | MS.gene40014:CDS | 50.0% | |
| ! | CACTCGGTGAGTAGTTAAGC+TGG | - | chr1.4:59570846-59570865 | None:intergenic | 50.0% |
| ! | TTTTGCTACCACACAGGACC+AGG | + | chr1.4:59570885-59570904 | MS.gene40014:CDS | 50.0% |
| !! | AAGACGGGTTGAATTTGGGC+TGG | + | chr1.4:59569316-59569335 | MS.gene40014:CDS | 50.0% |
| !! | GAATGATCTGGTTTGGGGCA+AGG | + | chr1.4:59569058-59569077 | MS.gene40014:CDS | 50.0% |
| !! | GGACTTGGTAGTTGGGGTTT+TGG | + | chr1.4:59568059-59568078 | MS.gene40014:CDS | 50.0% |
| !! | GTTACTCGGGTTGAGTTGGA+TGG | + | chr1.4:59568549-59568568 | MS.gene40014:CDS | 50.0% |
| ACCTCTATAGGAGGAGGAGG+AGG | - | chr1.4:59568006-59568025 | None:intergenic | 55.0% | |
| AGGTGAGAAGCCATCCATGG+TGG | + | chr1.4:59569078-59569097 | MS.gene40014:CDS | 55.0% | |
| ATCAGTACGCTGACGTCCCA+AGG | + | chr1.4:59569924-59569943 | MS.gene40014:CDS | 55.0% | |
| CCCTCAACCTCTATAGGAGG+AGG | - | chr1.4:59568012-59568031 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGGATTGTCT+AGG | - | chr1.4:59567996-59568015 | None:intergenic | 55.0% | |
| GCAAGGTGAGAAGCCATCCA+TGG | + | chr1.4:59569075-59569094 | MS.gene40014:CDS | 55.0% | |
| GGAACGTACGCGTGGAATGA+AGG | + | chr1.4:59569191-59569210 | MS.gene40014:CDS | 55.0% | |
| GTGGGTAGCACAGGAACCAA+AGG | + | chr1.4:59570231-59570250 | MS.gene40014:CDS | 55.0% | |
| GTTTACGCTTGCGACGGGAT+TGG | - | chr1.4:59569748-59569767 | None:intergenic | 55.0% | |
| TAGAGGGCGACCCAGTAAGT+TGG | - | chr1.4:59570045-59570064 | None:intergenic | 55.0% | |
| TCAGTACGCTGACGTCCCAA+GGG | + | chr1.4:59569925-59569944 | MS.gene40014:CDS | 55.0% | |
| TCCTCCTCCTCCTCCTATAG+AGG | + | chr1.4:59568002-59568021 | MS.gene40014:CDS | 55.0% | |
| !! | ACTCGGGTTGAGTTGGATGG+AGG | + | chr1.4:59568552-59568571 | MS.gene40014:CDS | 55.0% |
| !! | CTCGGGTTGAGTTGGATGGA+GGG | + | chr1.4:59568553-59568572 | MS.gene40014:CDS | 55.0% |
| !! | CTTGCGACGGGATTGGTTTG+TGG | - | chr1.4:59569741-59569760 | None:intergenic | 55.0% |
| AGAAGCCATCCATGGTGGCC+AGG | + | chr1.4:59569083-59569102 | MS.gene40014:CDS | 60.0% | |
| AGGAAGCAAGCGGGCAAGAG+TGG | + | chr1.4:59570738-59570757 | MS.gene40014:CDS | 60.0% | |
| ATGGGGATGGAACGTACGCG+TGG | + | chr1.4:59569183-59569202 | MS.gene40014:CDS | 60.0% | |
| GCCGAAAGCAGCTTGCGCAT+CGG | - | chr1.4:59570779-59570798 | None:intergenic | 60.0% | |
| GCTGACGTCCCAAGGGTGAA+AGG | + | chr1.4:59569932-59569951 | MS.gene40014:CDS | 60.0% | |
| TCCTTCGGATGCATCTGCGC+AGG | + | chr1.4:59569118-59569137 | MS.gene40014:CDS | 60.0% | |
| TCTGTCCTGGCCACCATGGA+TGG | - | chr1.4:59569091-59569110 | None:intergenic | 60.0% | |
| ! | GCCGATGCGCAAGCTGCTTT+CGG | + | chr1.4:59570775-59570794 | MS.gene40014:CDS | 60.0% |
| GCCTGCGCAGATGCATCCGA+AGG | - | chr1.4:59569122-59569141 | None:intergenic | 65.0% | |
| ! | GAAGGGGCGCGCTCATAGTC+TGG | - | chr1.4:59570484-59570503 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 59567973 | 59570951 | 59567973 | ID=MS.gene40014 |
| chr1.4 | mRNA | 59567973 | 59570951 | 59567973 | ID=MS.gene40014.t1;Parent=MS.gene40014 |
| chr1.4 | exon | 59567973 | 59570951 | 59567973 | ID=MS.gene40014.t1.exon1;Parent=MS.gene40014.t1 |
| chr1.4 | CDS | 59567973 | 59570951 | 59567973 | ID=cds.MS.gene40014.t1;Parent=MS.gene40014.t1 |
| Gene Sequence |
| Protein sequence |
