Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40384.t1 | XP_013448984.1 | 93.3 | 565 | 38 | 0 | 1 | 565 | 1 | 565 | 0.00E+00 | 1114.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40384.t1 | Q8LIY8 | 78.3 | 483 | 105 | 0 | 83 | 565 | 83 | 565 | 5.5e-242 | 838.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40384.t1 | A0A072U0R1 | 93.3 | 565 | 38 | 0 | 1 | 565 | 1 | 565 | 0.0e+00 | 1114.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050165 | MS.gene40384 | -0.802063 | 6.70E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene40384 | 0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene40384 | 0.804141 | 2.49E-49 | -1.69E-46 |
| MS.gene060823 | MS.gene40384 | 0.814061 | 1.87E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40384.t1 | MTR_3g109610 | 95.929 | 565 | 23 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1138 |
| MS.gene40384.t1 | MTR_7g063800 | 94.336 | 565 | 32 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1121 |
| MS.gene40384.t1 | MTR_3g109610 | 95.455 | 484 | 22 | 0 | 1 | 484 | 1 | 484 | 0.0 | 974 |
| MS.gene40384.t1 | MTR_5g025230 | 26.253 | 499 | 286 | 23 | 97 | 562 | 118 | 567 | 2.51e-26 | 113 |
| MS.gene40384.t1 | MTR_5g025250 | 26.347 | 501 | 281 | 25 | 98 | 562 | 120 | 568 | 7.78e-26 | 112 |
| MS.gene40384.t1 | MTR_5g025270 | 25.000 | 488 | 305 | 19 | 98 | 562 | 121 | 570 | 6.78e-24 | 106 |
| MS.gene40384.t1 | MTR_8g037275 | 23.715 | 506 | 306 | 21 | 96 | 562 | 100 | 564 | 7.70e-21 | 96.7 |
| MS.gene40384.t1 | MTR_2g070460 | 24.440 | 491 | 306 | 22 | 97 | 562 | 151 | 601 | 1.07e-20 | 96.3 |
| MS.gene40384.t1 | MTR_8g037315 | 24.314 | 510 | 306 | 22 | 96 | 565 | 63 | 532 | 1.39e-19 | 92.8 |
| MS.gene40384.t1 | MTR_8g037290 | 23.622 | 508 | 304 | 22 | 96 | 562 | 100 | 564 | 3.01e-19 | 91.7 |
| MS.gene40384.t1 | MTR_8g037310 | 23.969 | 509 | 301 | 23 | 96 | 562 | 100 | 564 | 4.63e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40384.t1 | AT4G32810 | 69.094 | 508 | 149 | 5 | 64 | 564 | 63 | 569 | 0.0 | 756 |
| MS.gene40384.t1 | AT4G32810 | 65.730 | 534 | 149 | 6 | 64 | 564 | 63 | 595 | 0.0 | 741 |
| MS.gene40384.t1 | AT1G30100 | 26.550 | 516 | 319 | 22 | 71 | 562 | 101 | 580 | 3.68e-27 | 116 |
| MS.gene40384.t1 | AT3G24220 | 26.499 | 517 | 319 | 24 | 66 | 562 | 92 | 567 | 7.71e-24 | 105 |
| MS.gene40384.t1 | AT3G63520 | 25.977 | 512 | 292 | 26 | 96 | 565 | 64 | 530 | 4.05e-22 | 100 |
| MS.gene40384.t1 | AT3G14440 | 23.413 | 504 | 345 | 19 | 73 | 562 | 113 | 589 | 1.00e-18 | 90.1 |
| MS.gene40384.t1 | AT4G18350 | 23.938 | 518 | 327 | 24 | 73 | 562 | 96 | 574 | 6.67e-16 | 81.3 |
Find 172 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAACCTTCGCTCATTTAA+TGG | 0.163091 | 3.1:-88067926 | MS.gene40384:CDS |
| TACTTCAACCCTAGATAATT+AGG | 0.195998 | 3.1:+88067662 | None:intergenic |
| CCCCATTTCAAAGCAAAATA+TGG | 0.236830 | 3.1:-88071650 | MS.gene40384:CDS |
| CAATACCTCAATGGCATTTC+AGG | 0.243692 | 3.1:+88068299 | None:intergenic |
| ATTTGAGTACAGTGATTCTT+TGG | 0.245117 | 3.1:-88068528 | MS.gene40384:CDS |
| ATGCCTTTCCCATGTTCATT+TGG | 0.256695 | 3.1:+88067704 | None:intergenic |
| TGCCTTTCCCATGTTCATTT+GGG | 0.293559 | 3.1:+88067705 | None:intergenic |
| GCCAGAGCTAAGTTCCCTTA+TGG | 0.303157 | 3.1:-88067225 | MS.gene40384:CDS |
| CTTCATATGCATTTATGAAA+TGG | 0.332304 | 3.1:+88068038 | None:intergenic |
| TCCCCTATGTTCCACATACC+TGG | 0.339270 | 3.1:+88068890 | None:intergenic |
| CGAAACAAGGGCATCTATAA+AGG | 0.339727 | 3.1:-88071580 | MS.gene40384:CDS |
| CCAATTGTCTCCAATGTGTC+GGG | 0.341840 | 3.1:+88068554 | None:intergenic |
| ACTTCAACCCTAGATAATTA+GGG | 0.351152 | 3.1:+88067663 | None:intergenic |
| TCTAATGAGAGGAAGGTTAT+TGG | 0.352894 | 3.1:-88068398 | MS.gene40384:CDS |
| AAGACCTTGGTAAGGGTGTT+GGG | 0.358257 | 3.1:+88067596 | None:intergenic |
| CATATGGATTGCATGGATGC+TGG | 0.364734 | 3.1:-88067197 | MS.gene40384:CDS |
| TGTCTGACGGAGACACAAAA+AGG | 0.364914 | 3.1:-88068593 | MS.gene40384:CDS |
| CTAGTATCTCTCAAGAGAAA+TGG | 0.369443 | 3.1:-88071429 | MS.gene40384:CDS |
| TTCCCTTATGGACTTCCATA+TGG | 0.378303 | 3.1:-88067213 | MS.gene40384:CDS |
| ATGGGGTTTCGTATTATAGA+TGG | 0.382685 | 3.1:+88071667 | None:intergenic |
| ACATGCTTGATAACACTTGT+AGG | 0.384774 | 3.1:-88071618 | MS.gene40384:CDS |
| TTATTGGACGGGTCGATTGT+AGG | 0.384903 | 3.1:-88068382 | MS.gene40384:CDS |
| TATTGGACGGGTCGATTGTA+GGG | 0.385865 | 3.1:-88068381 | MS.gene40384:CDS |
| AGCATAAACCCTAATTATCT+AGG | 0.402596 | 3.1:-88067671 | MS.gene40384:CDS |
| CACGCCTGTGTTGGCATTGT+CGG | 0.410914 | 3.1:+88068643 | None:intergenic |
| TTTGAGTACAGTGATTCTTT+GGG | 0.419607 | 3.1:-88068527 | MS.gene40384:CDS |
| CATAACATGCATAAAAGCTT+TGG | 0.420483 | 3.1:+88068214 | None:intergenic |
| AAATGGAGAAGGATATGCTT+TGG | 0.421784 | 3.1:-88067277 | MS.gene40384:CDS |
| CCCGACACATTGGAGACAAT+TGG | 0.425582 | 3.1:-88068554 | MS.gene40384:CDS |
| GCTGCTTCTAATGTTCCATA+TGG | 0.430345 | 3.1:+88067734 | None:intergenic |
| GGGCGGTACATCACCCGGTT+GGG | 0.432763 | 3.1:-88068360 | MS.gene40384:CDS |
| GTCGGCCTTCACTTCGAGGA+CGG | 0.433069 | 3.1:-88068827 | MS.gene40384:CDS |
| TAGTATCTCTCAAGAGAAAT+GGG | 0.438986 | 3.1:-88071428 | MS.gene40384:CDS |
| AACTTCAGGCATCTCTTTGA+CGG | 0.439182 | 3.1:-88068863 | MS.gene40384:CDS |
| TCCTCTGTTGCTCCTGGTCG+AGG | 0.440338 | 3.1:+88067419 | None:intergenic |
| ATAACATAGTGTTCAGTAAC+GGG | 0.440855 | 3.1:+88068326 | None:intergenic |
| TATGAAGAGGAAGATGAAGA+TGG | 0.442587 | 3.1:-88068022 | MS.gene40384:CDS |
| CCACTGGATGGAAGTCCATA+TGG | 0.442857 | 3.1:-88067749 | MS.gene40384:CDS |
| TCGGCCTTCACTTCGAGGAC+GGG | 0.453191 | 3.1:-88068826 | MS.gene40384:CDS |
| TGTGTCGGGGTCTATCACTA+TGG | 0.455071 | 3.1:+88068568 | None:intergenic |
| TCCAATTGTCTCCAATGTGT+CGG | 0.457857 | 3.1:+88068553 | None:intergenic |
| CTTGGTCGGCCTTCACTTCG+AGG | 0.458257 | 3.1:-88068831 | MS.gene40384:CDS |
| AATCCATATGGAAGTCCATA+AGG | 0.458996 | 3.1:+88067210 | None:intergenic |
| ACATAGGGGACTACAACTTC+AGG | 0.459853 | 3.1:-88068877 | MS.gene40384:CDS |
| TCATCTTCCTCTGTTGCTCC+TGG | 0.464373 | 3.1:+88067413 | None:intergenic |
| TGGTGAAGCTCGGCGATGGG+AGG | 0.464890 | 3.1:-88068622 | MS.gene40384:CDS |
| GCCCAGGTATGTGGAACATA+GGG | 0.467857 | 3.1:-88068892 | MS.gene40384:CDS |
| TCCATGCAACATGGTGTTGA+TGG | 0.469071 | 3.1:+88071452 | None:intergenic |
| AATCAGAAAGGGCTAAGAAC+TGG | 0.469124 | 3.1:-88067481 | MS.gene40384:CDS |
| TTCGTGGCGAGGATGGAAAC+TGG | 0.475221 | 3.1:-88068422 | MS.gene40384:CDS |
| TGAAATTTGTACAATGGAGT+TGG | 0.476527 | 3.1:+88068251 | None:intergenic |
| CAGCATCCATGCAATCCATA+TGG | 0.477535 | 3.1:+88067198 | None:intergenic |
| ATGAAGAGGAAGATGAAGAT+GGG | 0.478254 | 3.1:-88068021 | MS.gene40384:CDS |
| GACGGGTACGCCACCTTGGT+CGG | 0.481643 | 3.1:-88068845 | MS.gene40384:CDS |
| TGCAGAAAGGAACGTACATA+AGG | 0.482926 | 3.1:-88068919 | MS.gene40384:intron |
| AACTCGCTATCCGTGACAAT+GGG | 0.483621 | 3.1:+88068482 | None:intergenic |
| GAAGGAGAACTGCTTGTTCA+AGG | 0.484767 | 3.1:-88071406 | MS.gene40384:CDS |
| GGGGCGGTACATCACCCGGT+TGG | 0.485866 | 3.1:-88068361 | MS.gene40384:CDS |
| CCATCGGCAAGTTGAATCTC+AGG | 0.486110 | 3.1:-88068789 | MS.gene40384:CDS |
| ATTGTGCTCAGAATTTGCTC+AGG | 0.486746 | 3.1:-88068280 | MS.gene40384:CDS |
| CAAAATACCTACCTAGCATC+TGG | 0.489402 | 3.1:+88067890 | None:intergenic |
| TGCATAAAAGCTTTGGACTC+AGG | 0.491550 | 3.1:+88068221 | None:intergenic |
| GGGAAAGGAATGGACCCAAC+CGG | 0.491902 | 3.1:+88068346 | None:intergenic |
| AACACAGGCGTGGTGAAGCT+CGG | 0.493828 | 3.1:-88068632 | MS.gene40384:CDS |
| TCCATAAGGGAACTTAGCTC+TGG | 0.495616 | 3.1:+88067224 | None:intergenic |
| GGCGTGGTGAAGCTCGGCGA+TGG | 0.496361 | 3.1:-88068626 | MS.gene40384:CDS |
| ATATGGATTGCATGGATGCT+GGG | 0.496428 | 3.1:-88067196 | MS.gene40384:CDS |
| AAAGACCTTGGTAAGGGTGT+TGG | 0.504729 | 3.1:+88067595 | None:intergenic |
| GGTGAAGCTCGGCGATGGGA+GGG | 0.506441 | 3.1:-88068621 | MS.gene40384:CDS |
| ACCATCAACACCATGTTGCA+TGG | 0.507173 | 3.1:-88071453 | MS.gene40384:CDS |
| GGACTTCCATATGGATTGCA+TGG | 0.509757 | 3.1:-88067204 | MS.gene40384:CDS |
| GGCGGTTAGTAGCCGGCCAT+CGG | 0.511442 | 3.1:-88068805 | MS.gene40384:CDS |
| TAAGGAATGGCCCAGGTATG+TGG | 0.512064 | 3.1:-88068901 | MS.gene40384:CDS |
| ATCCATATGGAAGTCCATAA+GGG | 0.514145 | 3.1:+88067211 | None:intergenic |
| TGGTCGGTTTAGAATACCAC+TGG | 0.515307 | 3.1:-88067765 | MS.gene40384:CDS |
| GCGCTGTGCTCCACAAGCAT+AGG | 0.517620 | 3.1:+88067631 | None:intergenic |
| ACTTCAGGCATCTCTTTGAC+GGG | 0.518526 | 3.1:-88068862 | MS.gene40384:CDS |
| AAAATTTCTTAGCCTACGTA+GGG | 0.521712 | 3.1:-88068700 | MS.gene40384:CDS |
| AGATTCAACTTGCCGATGGC+CGG | 0.528502 | 3.1:+88068793 | None:intergenic |
| TACAGATATGCCTATGCTTG+TGG | 0.531718 | 3.1:-88067641 | MS.gene40384:CDS |
| GACATACAAAGACCTTGGTA+AGG | 0.533022 | 3.1:+88067588 | None:intergenic |
| GAGCTTCACCACGCCTGTGT+TGG | 0.535944 | 3.1:+88068634 | None:intergenic |
| AAACTCGCTATCCGTGACAA+TGG | 0.539476 | 3.1:+88068481 | None:intergenic |
| TAAGTGAGGAACCAGAGAAA+AGG | 0.541857 | 3.1:+88068666 | None:intergenic |
| TTCTGAGCACAATACCTCAA+TGG | 0.542740 | 3.1:+88068290 | None:intergenic |
| GAAGCTCGGCGATGGGAGGG+TGG | 0.544082 | 3.1:-88068618 | MS.gene40384:CDS |
| CTTTGACGGGTACGCCACCT+TGG | 0.546670 | 3.1:-88068849 | MS.gene40384:CDS |
| AGAGGAAGATGAAGATGGGA+GGG | 0.552579 | 3.1:-88068017 | MS.gene40384:CDS |
| AGATCGATCTACAATCAGAA+AGG | 0.553319 | 3.1:-88067493 | MS.gene40384:CDS |
| GCGTGGTGAAGCTCGGCGAT+GGG | 0.553336 | 3.1:-88068625 | MS.gene40384:CDS |
| GTAACGGTCAAGTGATCTTG+AGG | 0.554054 | 3.1:+88071547 | None:intergenic |
| AGGACATATTCCACTCTGGC+TGG | 0.554078 | 3.1:-88071386 | MS.gene40384:intron |
| ATCCCCGACCTTATAAAACC+AGG | 0.554782 | 3.1:-88068449 | MS.gene40384:CDS |
| TGAGAGGAAGGTTATTGGAC+GGG | 0.555588 | 3.1:-88068393 | MS.gene40384:CDS |
| GGCCCAGGTATGTGGAACAT+AGG | 0.555855 | 3.1:-88068893 | MS.gene40384:CDS |
| TGGGAGGGTGGTTTGTCTGA+CGG | 0.556766 | 3.1:-88068606 | MS.gene40384:CDS |
| GAGTACAGTGATTCTTTGGG+AGG | 0.556860 | 3.1:-88068524 | MS.gene40384:CDS |
| GAGGACGGGCGGTTAGTAGC+CGG | 0.562327 | 3.1:-88068812 | MS.gene40384:CDS |
| GATCGATCTACAATCAGAAA+GGG | 0.563093 | 3.1:-88067492 | MS.gene40384:CDS |
| GCATTAGACCCAAATGAACA+TGG | 0.563212 | 3.1:-88067713 | MS.gene40384:CDS |
| AGGGTGTTGGGGAAGTTACA+AGG | 0.564187 | 3.1:+88067608 | None:intergenic |
| TTCAAGGACATATTCCACTC+TGG | 0.567527 | 3.1:-88071390 | MS.gene40384:CDS |
| TTTCATAAATGCATATGAAG+AGG | 0.569019 | 3.1:-88068035 | MS.gene40384:CDS |
| GTTCAGTAACGGGAAAGGAA+TGG | 0.569137 | 3.1:+88068336 | None:intergenic |
| AACTGGCTCTAATGAGAGGA+AGG | 0.569553 | 3.1:-88068405 | MS.gene40384:CDS |
| ACCGCCCGTCCTCGAAGTGA+AGG | 0.571723 | 3.1:+88068822 | None:intergenic |
| ATTGAAATAATAGGGTTGGT+CGG | 0.571946 | 3.1:-88067781 | MS.gene40384:intron |
| TCTGGCAATCTCTTCAAAAG+TGG | 0.572064 | 3.1:+88067242 | None:intergenic |
| ATCCTCGCCACGAAGTACCC+TGG | 0.574487 | 3.1:+88068431 | None:intergenic |
| ATTGGACGGGTCGATTGTAG+GGG | 0.575382 | 3.1:-88068380 | MS.gene40384:CDS |
| GATTGCTCCACCTCCACCAC+CGG | 0.575723 | 3.1:-88071500 | MS.gene40384:CDS |
| TATAAAACCAGGGTACTTCG+TGG | 0.578214 | 3.1:-88068438 | MS.gene40384:CDS |
| AAGAGGAAGATGAAGATGGG+AGG | 0.578297 | 3.1:-88068018 | MS.gene40384:CDS |
| AGGGTACTTCGTGGCGAGGA+TGG | 0.579122 | 3.1:-88068429 | MS.gene40384:CDS |
| TTGTGCTCAGAATTTGCTCA+GGG | 0.579588 | 3.1:-88068279 | MS.gene40384:CDS |
| GCATAAACCCTAATTATCTA+GGG | 0.582367 | 3.1:-88067670 | MS.gene40384:CDS |
| AAGATGTTCTACCAGATGCT+AGG | 0.584562 | 3.1:-88067901 | MS.gene40384:intron |
| GCTAAGAACTGGTATGAAGA+AGG | 0.585069 | 3.1:-88067470 | MS.gene40384:CDS |
| GAAAATTTCTTAGCCTACGT+AGG | 0.586815 | 3.1:-88068701 | MS.gene40384:CDS |
| CCCCTATGTTCCACATACCT+GGG | 0.587485 | 3.1:+88068891 | None:intergenic |
| ATCTCTCAAGAGAAATGGGA+AGG | 0.587980 | 3.1:-88071424 | MS.gene40384:CDS |
| CTCCATTGTACAAATTTCAG+TGG | 0.589016 | 3.1:-88068247 | MS.gene40384:CDS |
| AGTGATAGACCCCGACACAT+TGG | 0.593877 | 3.1:-88068564 | MS.gene40384:CDS |
| AAAGGAACGTACATAAGGAA+TGG | 0.595708 | 3.1:-88068914 | MS.gene40384:CDS |
| CTCGAAGTGAAGGCCGACCA+AGG | 0.599301 | 3.1:+88068832 | None:intergenic |
| AGACCTTGGTAAGGGTGTTG+GGG | 0.601982 | 3.1:+88067597 | None:intergenic |
| CTCTGCACATCCCATTGTCA+CGG | 0.602091 | 3.1:-88068492 | MS.gene40384:CDS |
| GGAAAGGAATGGACCCAACC+GGG | 0.602396 | 3.1:+88068347 | None:intergenic |
| ATAGTGTTCAGTAACGGGAA+AGG | 0.603605 | 3.1:+88068331 | None:intergenic |
| GCCTTCACTTCGAGGACGGG+CGG | 0.605814 | 3.1:-88068823 | MS.gene40384:CDS |
| TGTAGGGGCGGTACATCACC+CGG | 0.606513 | 3.1:-88068365 | MS.gene40384:CDS |
| CGGTTTAGAATACCACTGGA+TGG | 0.607749 | 3.1:-88067761 | MS.gene40384:CDS |
| CTTTGCCATTAAATGAGCGA+AGG | 0.609125 | 3.1:+88067921 | None:intergenic |
| AATAACATAGTGTTCAGTAA+CGG | 0.609373 | 3.1:+88068325 | None:intergenic |
| CATGTTATGTGCAAGACTAG+TGG | 0.609567 | 3.1:-88068200 | MS.gene40384:CDS |
| GACCCAAATGAACATGGGAA+AGG | 0.610952 | 3.1:-88067707 | MS.gene40384:CDS |
| TTGTGCCTGAAATGCCATTG+AGG | 0.611330 | 3.1:-88068304 | MS.gene40384:CDS |
| AAATGAACATGGGAAAGGCA+TGG | 0.612023 | 3.1:-88067702 | MS.gene40384:CDS |
| GTTTCGTATTATAGATGGTG+AGG | 0.614377 | 3.1:+88071672 | None:intergenic |
| GGAGCAACAGAGGAAGATGA+TGG | 0.616543 | 3.1:-88067410 | MS.gene40384:intron |
| ATGAGAGGAAGGTTATTGGA+CGG | 0.618133 | 3.1:-88068394 | MS.gene40384:CDS |
| TGCCACTGAAATTTGTACAA+TGG | 0.622547 | 3.1:+88068245 | None:intergenic |
| GAGGGTGACTGCTGTTATTG+CGG | 0.628329 | 3.1:-88067999 | MS.gene40384:CDS |
| AACATGGTGTTGATGGTCGC+CGG | 0.628701 | 3.1:+88071459 | None:intergenic |
| ACGTACATAAGGAATGGCCC+AGG | 0.629963 | 3.1:-88068908 | MS.gene40384:CDS |
| GCCTCGACCAGGAGCAACAG+AGG | 0.630798 | 3.1:-88067420 | MS.gene40384:CDS |
| TGGAAACTGGCTCTAATGAG+AGG | 0.631356 | 3.1:-88068409 | MS.gene40384:CDS |
| CAATTGTCTCCAATGTGTCG+GGG | 0.633425 | 3.1:+88068555 | None:intergenic |
| AACCAGGGTACTTCGTGGCG+AGG | 0.633536 | 3.1:-88068433 | MS.gene40384:CDS |
| TCCCCGACCTTATAAAACCA+GGG | 0.638042 | 3.1:-88068448 | MS.gene40384:CDS |
| CCATATGGACTTCCATCCAG+TGG | 0.639234 | 3.1:+88067749 | None:intergenic |
| AAATGGAAAGTAACGAACAA+AGG | 0.641051 | 3.1:+88068055 | None:intergenic |
| AACCCACTCACCAGCCAGAG+TGG | 0.642994 | 3.1:+88071376 | None:intergenic |
| AGATACTAGTCCATGCAACA+TGG | 0.643055 | 3.1:+88071443 | None:intergenic |
| ACATACAAAGACCTTGGTAA+GGG | 0.643165 | 3.1:+88067589 | None:intergenic |
| CCTGAGATTCAACTTGCCGA+TGG | 0.643276 | 3.1:+88068789 | None:intergenic |
| GAGAAAAGTTTAGAGACCAC+CGG | 0.644252 | 3.1:-88071478 | MS.gene40384:CDS |
| GGTGGAGCAATCACACGCGA+TGG | 0.648183 | 3.1:+88071511 | None:intergenic |
| CGACAATGCCAACACAGGCG+TGG | 0.649077 | 3.1:-88068642 | MS.gene40384:CDS |
| TGGACTCACAACATTTGTAA+CGG | 0.649095 | 3.1:+88071531 | None:intergenic |
| GGGTGTTGGGGAAGTTACAA+GGG | 0.650549 | 3.1:+88067609 | None:intergenic |
| TGGTGAGGCTGTGAAAGCCA+TGG | 0.651294 | 3.1:+88071687 | None:intergenic |
| CATTAGACCCAAATGAACAT+GGG | 0.657991 | 3.1:-88067712 | MS.gene40384:CDS |
| GTTGGCATTGTCGGTAAGTG+AGG | 0.658851 | 3.1:+88068652 | None:intergenic |
| CTTCCCCAACACCCTTACCA+AGG | 0.668332 | 3.1:-88067600 | MS.gene40384:intron |
| GCTTGCTAGCTCCCCTACGT+AGG | 0.674811 | 3.1:+88068688 | None:intergenic |
| CTTACCGACAATGCCAACAC+AGG | 0.676631 | 3.1:-88068647 | MS.gene40384:CDS |
| CCCAGGTATGTGGAACATAG+GGG | 0.677812 | 3.1:-88068891 | MS.gene40384:CDS |
| ATGGTGTTGATGGTCGCCGG+TGG | 0.692693 | 3.1:+88071462 | None:intergenic |
| GGACGGGTCGATTGTAGGGG+CGG | 0.705064 | 3.1:-88068377 | MS.gene40384:CDS |
| GAAGTGAAGGCCGACCAAGG+TGG | 0.710579 | 3.1:+88068835 | None:intergenic |
| AAATTTCTTAGCCTACGTAG+GGG | 0.750129 | 3.1:-88068699 | MS.gene40384:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTTAATAATATA+TGG | + | chr3.1:88067992-88068011 | None:intergenic | 0.0% |
| !! | AATAAATAAATAAAGATACA+TGG | - | chr3.1:88067799-88067818 | MS.gene40384:intron | 10.0% |
| !!! | AATAATCAATTATACTTTTA+AGG | - | chr3.1:88068119-88068138 | MS.gene40384:intron | 10.0% |
| !!! | ATAATCAATTATACTTTTAA+GGG | - | chr3.1:88068120-88068139 | MS.gene40384:intron | 10.0% |
| !! | AAAATACTAATAATTCATTC+CGG | - | chr3.1:88069503-88069522 | MS.gene40384:intron | 15.0% |
| !! | CATTGTTTATTGAAATAATA+GGG | - | chr3.1:88071078-88071097 | MS.gene40384:intron | 15.0% |
| !! | GTAAAATTGGAAAAAAAATA+GGG | - | chr3.1:88069547-88069566 | MS.gene40384:intron | 15.0% |
| !! | TCATTGTTTATTGAAATAAT+AGG | - | chr3.1:88071077-88071096 | MS.gene40384:intron | 15.0% |
| !! | TGATACTATAAATCTTTAAA+TGG | + | chr3.1:88067718-88067737 | None:intergenic | 15.0% |
| !!! | AAAATTTAAAACATACTAAG+CGG | - | chr3.1:88067925-88067944 | MS.gene40384:CDS | 15.0% |
| !!! | AAATGTTTTTAGTTTTTTAG+TGG | + | chr3.1:88068424-88068443 | None:intergenic | 15.0% |
| !!! | ACATCTTAATTATTTTACAT+TGG | - | chr3.1:88071000-88071019 | MS.gene40384:intron | 15.0% |
| !!! | GTATTTTTGAAAATATTACA+GGG | + | chr3.1:88068211-88068230 | None:intergenic | 15.0% |
| !!! | TAGTATGTTTTAAATTTTGT+TGG | + | chr3.1:88067923-88067942 | None:intergenic | 15.0% |
| !! | ATTTATAGTAAGAACTTACA+TGG | - | chr3.1:88069793-88069812 | MS.gene40384:intron | 20.0% |
| !! | CGGCAATAAAAATATAAAAT+TGG | + | chr3.1:88067564-88067583 | None:intergenic | 20.0% |
| !! | GGTAAAATTGGAAAAAAAAT+AGG | - | chr3.1:88069546-88069565 | MS.gene40384:intron | 20.0% |
| !! | TAACATTTCTTAAAAGAAAG+AGG | - | chr3.1:88067662-88067681 | MS.gene40384:CDS | 20.0% |
| !! | TGACATAAAAAGGTTATTAT+TGG | - | chr3.1:88069880-88069899 | MS.gene40384:intron | 20.0% |
| !!! | GGTATTTTTGAAAATATTAC+AGG | + | chr3.1:88068212-88068231 | None:intergenic | 20.0% |
| !!! | TATTAACTTGTGACATAAAA+AGG | - | chr3.1:88069870-88069889 | MS.gene40384:intron | 20.0% |
| ! | AAAAAAAAGTTAGAACAAGG+AGG | + | chr3.1:88071527-88071546 | None:intergenic | 25.0% |
| ! | AAAAAAAGTTAGAACAAGGA+GGG | + | chr3.1:88071526-88071545 | None:intergenic | 25.0% |
| ! | AAAATTATCAACTCTTCCTT+AGG | + | chr3.1:88069925-88069944 | None:intergenic | 25.0% |
| ! | AAATATCATGTACGAATCAA+TGG | + | chr3.1:88068158-88068177 | None:intergenic | 25.0% |
| ! | AATAACATAGTGTTCAGTAA+CGG | + | chr3.1:88070545-88070564 | None:intergenic | 25.0% |
| ! | AATTGATAAATGCAAACCTA+AGG | - | chr3.1:88069906-88069925 | MS.gene40384:intron | 25.0% |
| ! | ACCAAATTCAAAAAAACTAG+TGG | + | chr3.1:88069695-88069714 | None:intergenic | 25.0% |
| ! | AGATTATATAATCCAGACTA+GGG | + | chr3.1:88068234-88068253 | None:intergenic | 25.0% |
| ! | AGGAGATTAGAAATAGATTT+AGG | - | chr3.1:88069276-88069295 | MS.gene40384:intron | 25.0% |
| ! | ATAAATTCAGTCAAAAAACG+TGG | + | chr3.1:88068833-88068852 | None:intergenic | 25.0% |
| ! | CCAAATTCAAAAAAACTAGT+GGG | + | chr3.1:88069694-88069713 | None:intergenic | 25.0% |
| ! | CTTCATATGCATTTATGAAA+TGG | + | chr3.1:88070832-88070851 | None:intergenic | 25.0% |
| ! | GATAAAAACTATGAGTGTTA+GGG | + | chr3.1:88067533-88067552 | None:intergenic | 25.0% |
| ! | GATTTCGGGAAAATTAAATT+CGG | - | chr3.1:88068270-88068289 | MS.gene40384:CDS | 25.0% |
| ! | GGTAAAAAAAAGTTAGAACA+AGG | + | chr3.1:88071530-88071549 | None:intergenic | 25.0% |
| ! | GTTTATTGAAATAATAGGGT+TGG | - | chr3.1:88071082-88071101 | MS.gene40384:intron | 25.0% |
| ! | TAAATCTTTAAATGGAGTAG+TGG | + | chr3.1:88067710-88067729 | None:intergenic | 25.0% |
| ! | TGATAAAAACTATGAGTGTT+AGG | + | chr3.1:88067534-88067553 | None:intergenic | 25.0% |
| ! | TTTCATAAATGCATATGAAG+AGG | - | chr3.1:88070832-88070851 | MS.gene40384:intron | 25.0% |
| !! | AAGTTTTCATTTCGAAACAA+GGG | - | chr3.1:88067275-88067294 | MS.gene40384:CDS | 25.0% |
| !! | AATTATTTCTCCTCAAGAAA+AGG | + | chr3.1:88069848-88069867 | None:intergenic | 25.0% |
| !! | ACTTGTTTAAGGCTATAAAT+AGG | + | chr3.1:88068506-88068525 | None:intergenic | 25.0% |
| !! | TGATAATTTTACATGCAGAA+AGG | - | chr3.1:88069935-88069954 | MS.gene40384:intron | 25.0% |
| !!! | AACCATATTTTGCTTTGAAA+TGG | + | chr3.1:88067222-88067241 | None:intergenic | 25.0% |
| !!! | ACCATATTTTGCTTTGAAAT+GGG | + | chr3.1:88067221-88067240 | None:intergenic | 25.0% |
| !!! | ATAGAGGTATTTATTGAAGA+TGG | - | chr3.1:88068477-88068496 | MS.gene40384:CDS | 25.0% |
| !!! | ATTTTGGTATGTGATTTTGA+AGG | - | chr3.1:88070772-88070791 | MS.gene40384:intron | 25.0% |
| !!! | TAGTATTTTTCAGATGATTC+CGG | + | chr3.1:88069492-88069511 | None:intergenic | 25.0% |
| !!! | TTATACTTTTAAGGGATCTA+CGG | - | chr3.1:88068128-88068147 | MS.gene40384:intron | 25.0% |
| AAAAAAGTTAGAACAAGGAG+GGG | + | chr3.1:88071525-88071544 | None:intergenic | 30.0% | |
| AAAATTTCTTAGCCTACGTA+GGG | - | chr3.1:88070167-88070186 | MS.gene40384:intron | 30.0% | |
| AAATGGAAAGTAACGAACAA+AGG | + | chr3.1:88070815-88070834 | None:intergenic | 30.0% | |
| AATCCAATGCTGAATATTTC+CGG | - | chr3.1:88068607-88068626 | MS.gene40384:CDS | 30.0% | |
| ACCATATTGTTAGTGATTTC+GGG | - | chr3.1:88068256-88068275 | MS.gene40384:CDS | 30.0% | |
| ACGTTCAACTAAATGTATGT+TGG | + | chr3.1:88071336-88071355 | None:intergenic | 30.0% | |
| ACTTCAACCCTAGATAATTA+GGG | + | chr3.1:88071207-88071226 | None:intergenic | 30.0% | |
| AGCATAAACCCTAATTATCT+AGG | - | chr3.1:88071196-88071215 | MS.gene40384:intron | 30.0% | |
| AGTCAATGAAAATGTGTTAG+TGG | - | chr3.1:88068542-88068561 | MS.gene40384:CDS | 30.0% | |
| ATAACATAGTGTTCAGTAAC+GGG | + | chr3.1:88070544-88070563 | None:intergenic | 30.0% | |
| ATCATGTCGTTAGCTATAAA+CGG | - | chr3.1:88069631-88069650 | MS.gene40384:intron | 30.0% | |
| ATTGACTGTATTAATGACCT+AGG | + | chr3.1:88068529-88068548 | None:intergenic | 30.0% | |
| ATTTGAGTACAGTGATTCTT+TGG | - | chr3.1:88070339-88070358 | MS.gene40384:intron | 30.0% | |
| CAGATTATATAATCCAGACT+AGG | + | chr3.1:88068235-88068254 | None:intergenic | 30.0% | |
| CATAACATGCATAAAAGCTT+TGG | + | chr3.1:88070656-88070675 | None:intergenic | 30.0% | |
| CTAGTCTGGATTATATAATC+TGG | - | chr3.1:88068233-88068252 | MS.gene40384:CDS | 30.0% | |
| GACCATATTGTTAGTGATTT+CGG | - | chr3.1:88068255-88068274 | MS.gene40384:CDS | 30.0% | |
| GATTATATAATCCAGACTAG+GGG | + | chr3.1:88068233-88068252 | None:intergenic | 30.0% | |
| GCATAAACCCTAATTATCTA+GGG | - | chr3.1:88071197-88071216 | MS.gene40384:intron | 30.0% | |
| GTATTCAATTATGACCTTAC+AGG | + | chr3.1:88071031-88071050 | None:intergenic | 30.0% | |
| TACTTCAACCCTAGATAATT+AGG | + | chr3.1:88071208-88071227 | None:intergenic | 30.0% | |
| TAGTATCTCTCAAGAGAAAT+GGG | - | chr3.1:88067439-88067458 | MS.gene40384:CDS | 30.0% | |
| TCAACTAAATGTATGTTGGT+GGG | + | chr3.1:88071332-88071351 | None:intergenic | 30.0% | |
| TGAAAGAGAGTCATTAATGT+GGG | + | chr3.1:88068583-88068602 | None:intergenic | 30.0% | |
| TGAAATTTGTACAATGGAGT+TGG | + | chr3.1:88070619-88070638 | None:intergenic | 30.0% | |
| TTAAAACATACTAAGCGGAA+AGG | - | chr3.1:88067930-88067949 | MS.gene40384:CDS | 30.0% | |
| TTCAACTAAATGTATGTTGG+TGG | + | chr3.1:88071333-88071352 | None:intergenic | 30.0% | |
| TTGAAAGAGAGTCATTAATG+TGG | + | chr3.1:88068584-88068603 | None:intergenic | 30.0% | |
| TTTGAGTACAGTGATTCTTT+GGG | - | chr3.1:88070340-88070359 | MS.gene40384:intron | 30.0% | |
| ! | ATTGAAATAATAGGGTTGGT+CGG | - | chr3.1:88071086-88071105 | MS.gene40384:intron | 30.0% |
| ! | CAAGTTTTCATTTCGAAACA+AGG | - | chr3.1:88067274-88067293 | MS.gene40384:CDS | 30.0% |
| ! | CTAAGAAATTTTCAGCCTTA+GGG | + | chr3.1:88070159-88070178 | None:intergenic | 30.0% |
| ! | CTAATAACTTCCTTTTCTTG+AGG | - | chr3.1:88069835-88069854 | MS.gene40384:intron | 30.0% |
| ! | TATTTCCGGATTTTACATTC+CGG | - | chr3.1:88068621-88068640 | MS.gene40384:CDS | 30.0% |
| ! | TTAATCCGGAAAGTATAGTT+CGG | - | chr3.1:88068699-88068718 | MS.gene40384:CDS | 30.0% |
| !! | TATACTTTTAAGGGATCTAC+GGG | - | chr3.1:88068129-88068148 | MS.gene40384:intron | 30.0% |
| !!! | ACTTTTAGGGTTTGTATGAA+CGG | - | chr3.1:88069009-88069028 | MS.gene40384:intron | 30.0% |
| !!! | CCATATTTTGCTTTGAAATG+GGG | + | chr3.1:88067220-88067239 | None:intergenic | 30.0% |
| !!! | CCCACTAGTTTTTTTGAATT+TGG | - | chr3.1:88069691-88069710 | MS.gene40384:intron | 30.0% |
| !!! | TGATTCCGGATTTTAAAATC+CGG | + | chr3.1:88069478-88069497 | None:intergenic | 30.0% |
| !!! | TTAGTTTTTTAGTGGTGTCA+TGG | + | chr3.1:88068416-88068435 | None:intergenic | 30.0% |
| !!! | TTTTTTTACCCTCATATGAC+AGG | - | chr3.1:88071540-88071559 | MS.gene40384:CDS | 30.0% |
| !!! | TTTTTTTCCAATTTTACCCC+TGG | + | chr3.1:88069544-88069563 | None:intergenic | 30.0% |
| AAAGGAACGTACATAAGGAA+TGG | - | chr3.1:88069953-88069972 | MS.gene40384:intron | 35.0% | |
| AAATGGAGAAGGATATGCTT+TGG | - | chr3.1:88071590-88071609 | MS.gene40384:CDS | 35.0% | |
| AAATTTCTTAGCCTACGTAG+GGG | - | chr3.1:88070168-88070187 | MS.gene40384:intron | 35.0% | |
| AAGTATAGTTCGGAAACCAA+AGG | - | chr3.1:88068709-88068728 | MS.gene40384:CDS | 35.0% | |
| AATAGCATTTCAGCTTGTGT+GGG | + | chr3.1:88068364-88068383 | None:intergenic | 35.0% | |
| AATCCATATGGAAGTCCATA+AGG | + | chr3.1:88071660-88071679 | None:intergenic | 35.0% | |
| AATCCGGAAATATTCAGCAT+TGG | + | chr3.1:88068613-88068632 | None:intergenic | 35.0% | |
| ACATACAAAGACCTTGGTAA+GGG | + | chr3.1:88071281-88071300 | None:intergenic | 35.0% | |
| ACATTCCGGAATGTAAAATC+CGG | + | chr3.1:88068629-88068648 | None:intergenic | 35.0% | |
| AGATCGATCTACAATCAGAA+AGG | - | chr3.1:88071374-88071393 | MS.gene40384:intron | 35.0% | |
| AGATGTGAAGTGAAGAATAG+AGG | - | chr3.1:88068461-88068480 | MS.gene40384:CDS | 35.0% | |
| ATCAGTGAGAAAAATGGAGA+AGG | - | chr3.1:88071579-88071598 | MS.gene40384:CDS | 35.0% | |
| ATCCATATGGAAGTCCATAA+GGG | + | chr3.1:88071659-88071678 | None:intergenic | 35.0% | |
| ATGAAGAGGAAGATGAAGAT+GGG | - | chr3.1:88070846-88070865 | MS.gene40384:intron | 35.0% | |
| ATGGGGTTTCGTATTATAGA+TGG | + | chr3.1:88067203-88067222 | None:intergenic | 35.0% | |
| CAAGTAGAACTCGACTATAA+TGG | + | chr3.1:88067886-88067905 | None:intergenic | 35.0% | |
| CAATTATGACCTTACAGGAA+GGG | + | chr3.1:88071026-88071045 | None:intergenic | 35.0% | |
| CATTAGACCCAAATGAACAT+GGG | - | chr3.1:88071155-88071174 | MS.gene40384:intron | 35.0% | |
| CCCCATTTCAAAGCAAAATA+TGG | - | chr3.1:88067217-88067236 | MS.gene40384:CDS | 35.0% | |
| CTAGTATCTCTCAAGAGAAA+TGG | - | chr3.1:88067438-88067457 | MS.gene40384:CDS | 35.0% | |
| CTCCATTGTACAAATTTCAG+TGG | - | chr3.1:88070620-88070639 | MS.gene40384:intron | 35.0% | |
| GAAAATTTCTTAGCCTACGT+AGG | - | chr3.1:88070166-88070185 | MS.gene40384:intron | 35.0% | |
| GAATTGACATACAAAGACCT+TGG | + | chr3.1:88071287-88071306 | None:intergenic | 35.0% | |
| GACAAACCAATATTACGTGT+AGG | + | chr3.1:88068027-88068046 | None:intergenic | 35.0% | |
| GAGATTAGAATTAGGCTCTT+AGG | - | chr3.1:88069256-88069275 | MS.gene40384:intron | 35.0% | |
| GATCGATCTACAATCAGAAA+GGG | - | chr3.1:88071375-88071394 | MS.gene40384:intron | 35.0% | |
| GCTCTTAGGAGATTAGAATT+AGG | - | chr3.1:88069248-88069267 | MS.gene40384:intron | 35.0% | |
| GGTGGAAAAAGTAATACTCT+TGG | - | chr3.1:88069589-88069608 | MS.gene40384:intron | 35.0% | |
| GGTTTGGAAGGCTATTTATA+GGG | + | chr3.1:88068885-88068904 | None:intergenic | 35.0% | |
| GTAACATTCACTTCAAGTAG+AGG | + | chr3.1:88067861-88067880 | None:intergenic | 35.0% | |
| GTATTCCGGATTGTATATTC+CGG | - | chr3.1:88068733-88068752 | MS.gene40384:CDS | 35.0% | |
| GTTCTGCTAAAATACTGTTC+CGG | - | chr3.1:88069456-88069475 | MS.gene40384:intron | 35.0% | |
| GTTTATAGCTAACGACATGA+TGG | + | chr3.1:88069632-88069651 | None:intergenic | 35.0% | |
| GTTTCGTATTATAGATGGTG+AGG | + | chr3.1:88067198-88067217 | None:intergenic | 35.0% | |
| TATGAAGAGGAAGATGAAGA+TGG | - | chr3.1:88070845-88070864 | MS.gene40384:intron | 35.0% | |
| TATTGCAGGGTTCATATGAA+CGG | - | chr3.1:88068380-88068399 | MS.gene40384:CDS | 35.0% | |
| TCAATTATGACCTTACAGGA+AGG | + | chr3.1:88071027-88071046 | None:intergenic | 35.0% | |
| TCACCATTATCGCATTAATC+CGG | - | chr3.1:88068685-88068704 | MS.gene40384:CDS | 35.0% | |
| TCCATCATCAGTGAGAAAAA+TGG | - | chr3.1:88071573-88071592 | MS.gene40384:CDS | 35.0% | |
| TCCCGAAATCACTAACAATA+TGG | + | chr3.1:88068260-88068279 | None:intergenic | 35.0% | |
| TCTAATGAGAGGAAGGTTAT+TGG | - | chr3.1:88070469-88070488 | MS.gene40384:intron | 35.0% | |
| TGCCACTGAAATTTGTACAA+TGG | + | chr3.1:88070625-88070644 | None:intergenic | 35.0% | |
| TGGAAAATCATGGTTGTAGA+AGG | + | chr3.1:88068954-88068973 | None:intergenic | 35.0% | |
| TGGACTCACAACATTTGTAA+CGG | + | chr3.1:88067339-88067358 | None:intergenic | 35.0% | |
| TTTCAAAAATACCCCTAGTC+TGG | - | chr3.1:88068219-88068238 | MS.gene40384:CDS | 35.0% | |
| TTTCCGGATTAATGCGATAA+TGG | + | chr3.1:88068691-88068710 | None:intergenic | 35.0% | |
| ! | AATGACCTAGGACTTGTTTA+AGG | + | chr3.1:88068517-88068536 | None:intergenic | 35.0% |
| ! | ACATGCTTGATAACACTTGT+AGG | - | chr3.1:88067249-88067268 | MS.gene40384:CDS | 35.0% |
| ! | GCTAAGAAATTTTCAGCCTT+AGG | + | chr3.1:88070160-88070179 | None:intergenic | 35.0% |
| ! | GGTCTCGTTGAAAACTTTTA+GGG | - | chr3.1:88068996-88069015 | MS.gene40384:intron | 35.0% |
| ! | TATAGCCTTAAACAAGTCCT+AGG | - | chr3.1:88068509-88068528 | MS.gene40384:CDS | 35.0% |
| !! | ACATAGCAGTAGTTTGCTAT+TGG | + | chr3.1:88069206-88069225 | None:intergenic | 35.0% |
| !! | ATACTTTTAAGGGATCTACG+GGG | - | chr3.1:88068130-88068149 | MS.gene40384:intron | 35.0% |
| !! | TCCATTTTTCTCACTGATGA+TGG | + | chr3.1:88071577-88071596 | None:intergenic | 35.0% |
| !! | TTGGTATGTGATTTTGAAGG+TGG | - | chr3.1:88070775-88070794 | MS.gene40384:intron | 35.0% |
| !!! | CTGTTCCGGATTTTAAAATC+CGG | - | chr3.1:88069470-88069489 | MS.gene40384:intron | 35.0% |
| !!! | GGATATGCTTTGGTTTTAGA+TGG | - | chr3.1:88071600-88071619 | MS.gene40384:CDS | 35.0% |
| AAAAGTTGGCACTTCCTGTA+GGG | + | chr3.1:88068658-88068677 | None:intergenic | 40.0% | |
| AACTTCAGGCATCTCTTTGA+CGG | - | chr3.1:88070004-88070023 | MS.gene40384:intron | 40.0% | |
| AAGAAGAAACAAATGCCCTG+AGG | + | chr3.1:88069148-88069167 | None:intergenic | 40.0% | |
| AAGATGTTCTACCAGATGCT+AGG | - | chr3.1:88070966-88070985 | MS.gene40384:intron | 40.0% | |
| AATCAGAAAGGGCTAAGAAC+TGG | - | chr3.1:88071386-88071405 | MS.gene40384:intron | 40.0% | |
| ACAAGCTGAAATGCTATTGC+AGG | - | chr3.1:88068366-88068385 | MS.gene40384:CDS | 40.0% | |
| ACGAGACCCTTATCTATGAA+AGG | + | chr3.1:88068984-88069003 | None:intergenic | 40.0% | |
| AGAAGAAACAAATGCCCTGA+GGG | + | chr3.1:88069147-88069166 | None:intergenic | 40.0% | |
| AGATACTAGTCCATGCAACA+TGG | + | chr3.1:88067427-88067446 | None:intergenic | 40.0% | |
| ATAGCATTTCAGCTTGTGTG+GGG | + | chr3.1:88068363-88068382 | None:intergenic | 40.0% | |
| ATCTCTCAAGAGAAATGGGA+AGG | - | chr3.1:88067443-88067462 | MS.gene40384:CDS | 40.0% | |
| ATGAGAGGAAGGTTATTGGA+CGG | - | chr3.1:88070473-88070492 | MS.gene40384:intron | 40.0% | |
| ATGGTTGTAGAAGGAAGAAG+AGG | + | chr3.1:88068945-88068964 | None:intergenic | 40.0% | |
| ATTACCACACCTGTCATATG+AGG | + | chr3.1:88071552-88071571 | None:intergenic | 40.0% | |
| ATTCCCGTAATATACCTGGT+GGG | + | chr3.1:88068074-88068093 | None:intergenic | 40.0% | |
| CAAAATACCTACCTAGCATC+TGG | + | chr3.1:88070980-88070999 | None:intergenic | 40.0% | |
| CAAGCTGAAATGCTATTGCA+GGG | - | chr3.1:88068367-88068386 | MS.gene40384:CDS | 40.0% | |
| CAATACCTCAATGGCATTTC+AGG | + | chr3.1:88070571-88070590 | None:intergenic | 40.0% | |
| CAATAGCATTTCAGCTTGTG+TGG | + | chr3.1:88068365-88068384 | None:intergenic | 40.0% | |
| CAGAACCTTCGCTCATTTAA+TGG | - | chr3.1:88070941-88070960 | MS.gene40384:intron | 40.0% | |
| CATGTTATGTGCAAGACTAG+TGG | - | chr3.1:88070667-88070686 | MS.gene40384:intron | 40.0% | |
| CTTGATTCCCGTAATATACC+TGG | + | chr3.1:88068078-88068097 | None:intergenic | 40.0% | |
| CTTGTGTGGGGTTCATATAA+CGG | + | chr3.1:88068351-88068370 | None:intergenic | 40.0% | |
| CTTTGCCATTAAATGAGCGA+AGG | + | chr3.1:88070949-88070968 | None:intergenic | 40.0% | |
| GACATACAAAGACCTTGGTA+AGG | + | chr3.1:88071282-88071301 | None:intergenic | 40.0% | |
| GAGAAAAGTTTAGAGACCAC+CGG | - | chr3.1:88067389-88067408 | MS.gene40384:intron | 40.0% | |
| GAGAGTCATTAATGTGGGTT+TGG | + | chr3.1:88068578-88068597 | None:intergenic | 40.0% | |
| GCATTAGACCCAAATGAACA+TGG | - | chr3.1:88071154-88071173 | MS.gene40384:intron | 40.0% | |
| GCATTCCGGAATATACAATC+CGG | + | chr3.1:88068741-88068760 | None:intergenic | 40.0% | |
| GCTAAGAACTGGTATGAAGA+AGG | - | chr3.1:88071397-88071416 | MS.gene40384:CDS | 40.0% | |
| GCTGATCCTACACGTAATAT+TGG | - | chr3.1:88068018-88068037 | MS.gene40384:CDS | 40.0% | |
| GCTGCTTCTAATGTTCCATA+TGG | + | chr3.1:88071136-88071155 | None:intergenic | 40.0% | |
| GGGTCTTTCTTTGATGTCAT+GGG | - | chr3.1:88068315-88068334 | MS.gene40384:CDS | 40.0% | |
| GGGTTTGGAAGGCTATTTAT+AGG | + | chr3.1:88068886-88068905 | None:intergenic | 40.0% | |
| GGTTTCCGAACTATACTTTC+CGG | + | chr3.1:88068707-88068726 | None:intergenic | 40.0% | |
| GTAGAACTCGACTATAATGG+TGG | + | chr3.1:88067883-88067902 | None:intergenic | 40.0% | |
| GTCATTAATGTGGGTTTGGA+CGG | + | chr3.1:88068574-88068593 | None:intergenic | 40.0% | |
| GTTTGTATGAACGGTCAATG+AGG | - | chr3.1:88069018-88069037 | MS.gene40384:intron | 40.0% | |
| TAAGTGAGGAACCAGAGAAA+AGG | + | chr3.1:88070204-88070223 | None:intergenic | 40.0% | |
| TACAATCCGGAATACACCTT+TGG | + | chr3.1:88068728-88068747 | None:intergenic | 40.0% | |
| TACAGATATGCCTATGCTTG+TGG | - | chr3.1:88071226-88071245 | MS.gene40384:intron | 40.0% | |
| TATCTATGAAAGGCCAACGA+TGG | + | chr3.1:88068974-88068993 | None:intergenic | 40.0% | |
| TATGTCCTATCACATACCAG+TGG | - | chr3.1:88069221-88069240 | MS.gene40384:intron | 40.0% | |
| TCATTCCGGAATACGAAATC+CGG | - | chr3.1:88069517-88069536 | MS.gene40384:intron | 40.0% | |
| TCCAATTGTCTCCAATGTGT+CGG | + | chr3.1:88070317-88070336 | None:intergenic | 40.0% | |
| TCGAGGCACAAAAAATGGTT+CGG | + | chr3.1:88071434-88071453 | None:intergenic | 40.0% | |
| TCTGGCAATCTCTTCAAAAG+TGG | + | chr3.1:88071628-88071647 | None:intergenic | 40.0% | |
| TGCAGAAAGGAACGTACATA+AGG | - | chr3.1:88069948-88069967 | MS.gene40384:intron | 40.0% | |
| TGGAAGGCTATTTATAGGGA+GGG | + | chr3.1:88068881-88068900 | None:intergenic | 40.0% | |
| TGGGTCTTTCTTTGATGTCA+TGG | - | chr3.1:88068314-88068333 | MS.gene40384:CDS | 40.0% | |
| TTACCACACCTGTCATATGA+GGG | + | chr3.1:88071551-88071570 | None:intergenic | 40.0% | |
| TTCAAGGACATATTCCACTC+TGG | - | chr3.1:88067477-88067496 | MS.gene40384:CDS | 40.0% | |
| TTCCCTTATGGACTTCCATA+TGG | - | chr3.1:88071654-88071673 | MS.gene40384:CDS | 40.0% | |
| TTCTGAGCACAATACCTCAA+TGG | + | chr3.1:88070580-88070599 | None:intergenic | 40.0% | |
| TTGGAAGGCTATTTATAGGG+AGG | + | chr3.1:88068882-88068901 | None:intergenic | 40.0% | |
| ! | AATGCGATAATGGTGAACGA+GGG | + | chr3.1:88068681-88068700 | None:intergenic | 40.0% |
| ! | ATAGTGTTCAGTAACGGGAA+AGG | + | chr3.1:88070539-88070558 | None:intergenic | 40.0% |
| ! | ATATGGATTGCATGGATGCT+GGG | - | chr3.1:88071671-88071690 | MS.gene40384:CDS | 40.0% |
| ! | ATTGTGCTCAGAATTTGCTC+AGG | - | chr3.1:88070587-88070606 | MS.gene40384:intron | 40.0% |
| ! | CAACCATGATTTTCCATCGT+TGG | - | chr3.1:88068958-88068977 | MS.gene40384:intron | 40.0% |
| ! | GGGTCTCGTTGAAAACTTTT+AGG | - | chr3.1:88068995-88069014 | MS.gene40384:intron | 40.0% |
| ! | GTGGTCTCTAAACTTTTCTC+CGG | + | chr3.1:88067389-88067408 | None:intergenic | 40.0% |
| ! | TAATGCGATAATGGTGAACG+AGG | + | chr3.1:88068682-88068701 | None:intergenic | 40.0% |
| ! | TATAAAACCAGGGTACTTCG+TGG | - | chr3.1:88070429-88070448 | MS.gene40384:intron | 40.0% |
| ! | TTGTGCTCAGAATTTGCTCA+GGG | - | chr3.1:88070588-88070607 | MS.gene40384:intron | 40.0% |
| !! | CGAAACAAGGGCATCTATAA+AGG | - | chr3.1:88067287-88067306 | MS.gene40384:CDS | 40.0% |
| !! | CGTTGGCCTTTCATAGATAA+GGG | - | chr3.1:88068975-88068994 | MS.gene40384:intron | 40.0% |
| !! | TAGCAGTAGTTTGCTATTGG+AGG | + | chr3.1:88069203-88069222 | None:intergenic | 40.0% |
| !! | TCGTTGGCCTTTCATAGATA+AGG | - | chr3.1:88068974-88068993 | MS.gene40384:intron | 40.0% |
| !! | TGCATAAAAGCTTTGGACTC+AGG | + | chr3.1:88070649-88070668 | None:intergenic | 40.0% |
| !!! | CAGATGTTGTGCGCTTTTTT+GGG | - | chr3.1:88068295-88068314 | MS.gene40384:CDS | 40.0% |
| !!! | CGAAGTACCCTGGTTTTATA+AGG | + | chr3.1:88070429-88070448 | None:intergenic | 40.0% |
| !!! | GTACCCTGGTTTTATAAGGT+CGG | + | chr3.1:88070425-88070444 | None:intergenic | 40.0% |
| !!! | TACCCTGGTTTTATAAGGTC+GGG | + | chr3.1:88070424-88070443 | None:intergenic | 40.0% |
| !!! | TGAGTTTTCTGAAGTCCCTA+AGG | - | chr3.1:88070141-88070160 | MS.gene40384:intron | 40.0% |
| AAACTCGCTATCCGTGACAA+TGG | + | chr3.1:88070389-88070408 | None:intergenic | 45.0% | |
| AACTCGCTATCCGTGACAAT+GGG | + | chr3.1:88070388-88070407 | None:intergenic | 45.0% | |
| AAGAGGAAGATGAAGATGGG+AGG | - | chr3.1:88070849-88070868 | MS.gene40384:intron | 45.0% | |
| ACATAGGGGACTACAACTTC+AGG | - | chr3.1:88069990-88070009 | MS.gene40384:intron | 45.0% | |
| ACCATCAACACCATGTTGCA+TGG | - | chr3.1:88067414-88067433 | MS.gene40384:CDS | 45.0% | |
| ACTTCAGGCATCTCTTTGAC+GGG | - | chr3.1:88070005-88070024 | MS.gene40384:intron | 45.0% | |
| AGAGGAAGATGAAGATGGGA+GGG | - | chr3.1:88070850-88070869 | MS.gene40384:intron | 45.0% | |
| AGGATGGTGTGAGAAATGGT+GGG | + | chr3.1:88068907-88068926 | None:intergenic | 45.0% | |
| AGGCCAACGATGGAAAATCA+TGG | + | chr3.1:88068964-88068983 | None:intergenic | 45.0% | |
| ATACCAGTGGTTAGGCTCTT+AGG | - | chr3.1:88069234-88069253 | MS.gene40384:intron | 45.0% | |
| ATCCCCGACCTTATAAAACC+AGG | - | chr3.1:88070418-88070437 | MS.gene40384:intron | 45.0% | |
| ATGGTGAACGAGGGAAAAGT+TGG | + | chr3.1:88068672-88068691 | None:intergenic | 45.0% | |
| CAATTGTCTCCAATGTGTCG+GGG | + | chr3.1:88070315-88070334 | None:intergenic | 45.0% | |
| CAGCATCCATGCAATCCATA+TGG | + | chr3.1:88071672-88071691 | None:intergenic | 45.0% | |
| CCAATTGTCTCCAATGTGTC+GGG | + | chr3.1:88070316-88070335 | None:intergenic | 45.0% | |
| CCAGTAACGTGTCAGCAAAT+GGG | - | chr3.1:88068046-88068065 | MS.gene40384:CDS | 45.0% | |
| CCTAACCACTGGTATGTGAT+AGG | + | chr3.1:88069229-88069248 | None:intergenic | 45.0% | |
| CCTATCACATACCAGTGGTT+AGG | - | chr3.1:88069226-88069245 | MS.gene40384:intron | 45.0% | |
| GAAAAGTTGGCACTTCCTGT+AGG | + | chr3.1:88068659-88068678 | None:intergenic | 45.0% | |
| GAAGGAGAACTGCTTGTTCA+AGG | - | chr3.1:88067461-88067480 | MS.gene40384:CDS | 45.0% | |
| GAGTACAGTGATTCTTTGGG+AGG | - | chr3.1:88070343-88070362 | MS.gene40384:intron | 45.0% | |
| GATTCCCGTAATATACCTGG+TGG | + | chr3.1:88068075-88068094 | None:intergenic | 45.0% | |
| GGAAGGCTATTTATAGGGAG+GGG | + | chr3.1:88068880-88068899 | None:intergenic | 45.0% | |
| GGTACCCACCAGGTATATTA+CGG | - | chr3.1:88068067-88068086 | MS.gene40384:CDS | 45.0% | |
| GTAACGGTCAAGTGATCTTG+AGG | + | chr3.1:88067323-88067342 | None:intergenic | 45.0% | |
| GTACCCACCAGGTATATTAC+GGG | - | chr3.1:88068068-88068087 | MS.gene40384:CDS | 45.0% | |
| GTATGAACGGTCAATGAGGA+TGG | - | chr3.1:88069022-88069041 | MS.gene40384:intron | 45.0% | |
| GTCTGACGGAGACACAAAAA+GGG | - | chr3.1:88070275-88070294 | MS.gene40384:intron | 45.0% | |
| GTTGTAGAAGGAAGAAGAGG+AGG | + | chr3.1:88068942-88068961 | None:intergenic | 45.0% | |
| TATTGGACGGGTCGATTGTA+GGG | - | chr3.1:88070486-88070505 | MS.gene40384:intron | 45.0% | |
| TATTGGAGGAAAACCGAAGG+AGG | + | chr3.1:88069189-88069208 | None:intergenic | 45.0% | |
| TCCAGTAACGTGTCAGCAAA+TGG | - | chr3.1:88068045-88068064 | MS.gene40384:CDS | 45.0% | |
| TCCATAAGGGAACTTAGCTC+TGG | + | chr3.1:88071646-88071665 | None:intergenic | 45.0% | |
| TCCCCGACCTTATAAAACCA+GGG | - | chr3.1:88070419-88070438 | MS.gene40384:intron | 45.0% | |
| TGACCACTGACAAAAACGTG+TGG | + | chr3.1:88068790-88068809 | None:intergenic | 45.0% | |
| TGAGAGGAAGGTTATTGGAC+GGG | - | chr3.1:88070474-88070493 | MS.gene40384:intron | 45.0% | |
| TGCTATTGGAGGAAAACCGA+AGG | + | chr3.1:88069192-88069211 | None:intergenic | 45.0% | |
| TGTCTGACGGAGACACAAAA+AGG | - | chr3.1:88070274-88070293 | MS.gene40384:intron | 45.0% | |
| TGTTCTACCAGATGCTAGGT+AGG | - | chr3.1:88070970-88070989 | MS.gene40384:intron | 45.0% | |
| TTACATTGGCCCTTCCTGTA+AGG | - | chr3.1:88071014-88071033 | MS.gene40384:intron | 45.0% | |
| TTACCCTCATATGACAGGTG+TGG | - | chr3.1:88071545-88071564 | MS.gene40384:CDS | 45.0% | |
| TTATTGGACGGGTCGATTGT+AGG | - | chr3.1:88070485-88070504 | MS.gene40384:intron | 45.0% | |
| TTGTGCCTGAAATGCCATTG+AGG | - | chr3.1:88070563-88070582 | MS.gene40384:intron | 45.0% | |
| ! | AAAGACCTTGGTAAGGGTGT+TGG | + | chr3.1:88071275-88071294 | None:intergenic | 45.0% |
| ! | AGGCACAAAAAATGGTTCGG+AGG | + | chr3.1:88071431-88071450 | None:intergenic | 45.0% |
| ! | CATATGGATTGCATGGATGC+TGG | - | chr3.1:88071670-88071689 | MS.gene40384:CDS | 45.0% |
| ! | CCAAAAAAGCGCACAACATC+TGG | + | chr3.1:88068297-88068316 | None:intergenic | 45.0% |
| ! | CGGAAACCAAAGGTGTATTC+CGG | - | chr3.1:88068719-88068738 | MS.gene40384:CDS | 45.0% |
| ! | CGGTTTAGAATACCACTGGA+TGG | - | chr3.1:88071106-88071125 | MS.gene40384:intron | 45.0% |
| ! | GGACTTCCATATGGATTGCA+TGG | - | chr3.1:88071663-88071682 | MS.gene40384:CDS | 45.0% |
| ! | GGCACAAAAAATGGTTCGGA+GGG | + | chr3.1:88071430-88071449 | None:intergenic | 45.0% |
| ! | GTCTCTAAACTTTTCTCCGG+TGG | + | chr3.1:88067386-88067405 | None:intergenic | 45.0% |
| ! | GTTCAGTAACGGGAAAGGAA+TGG | + | chr3.1:88070534-88070553 | None:intergenic | 45.0% |
| ! | TCCATGCAACATGGTGTTGA+TGG | + | chr3.1:88067418-88067437 | None:intergenic | 45.0% |
| ! | TCTAAACTTTTCTCCGGTGG+TGG | + | chr3.1:88067383-88067402 | None:intergenic | 45.0% |
| ! | TGGTCGGTTTAGAATACCAC+TGG | - | chr3.1:88071102-88071121 | MS.gene40384:intron | 45.0% |
| ! | TTCCAATTTTACCCCTGGTC+CGG | + | chr3.1:88069539-88069558 | None:intergenic | 45.0% |
| !! | AACTGGCTCTAATGAGAGGA+AGG | - | chr3.1:88070462-88070481 | MS.gene40384:intron | 45.0% |
| !! | AAGACCTTGGTAAGGGTGTT+GGG | + | chr3.1:88071274-88071293 | None:intergenic | 45.0% |
| !! | GATTTTGAAGGTGGCAAGTG+TGG | - | chr3.1:88070784-88070803 | MS.gene40384:intron | 45.0% |
| !! | TGGAAACTGGCTCTAATGAG+AGG | - | chr3.1:88070458-88070477 | MS.gene40384:intron | 45.0% |
| !!! | ACCCTGGTTTTATAAGGTCG+GGG | + | chr3.1:88070423-88070442 | None:intergenic | 45.0% |
| !!! | CCAGATGTTGTGCGCTTTTT+TGG | - | chr3.1:88068294-88068313 | MS.gene40384:CDS | 45.0% |
| !!! | AAATTAATAATGTATTTTTT+CGG | + | chr3.1:88067584-88067603 | None:intergenic | 5.0% |
| !!! | ATTAATTTTGTTTTTAATTT+TGG | - | chr3.1:88070756-88070775 | MS.gene40384:intron | 5.0% |
| !!! | TTATTTATTTATTTTTTGAA+AGG | + | chr3.1:88067784-88067803 | None:intergenic | 5.0% |
| AACGAAGGACGGTTCATCTG+AGG | - | chr3.1:88069056-88069075 | MS.gene40384:intron | 50.0% | |
| ACGAAGGACGGTTCATCTGA+GGG | - | chr3.1:88069057-88069076 | MS.gene40384:intron | 50.0% | |
| ACGTACATAAGGAATGGCCC+AGG | - | chr3.1:88069959-88069978 | MS.gene40384:intron | 50.0% | |
| AGAAACAAATGCCCTGAGGG+AGG | + | chr3.1:88069144-88069163 | None:intergenic | 50.0% | |
| AGAAGGAAGAAGAGGAGGAG+AGG | + | chr3.1:88068937-88068956 | None:intergenic | 50.0% | |
| AGATTCAACTTGCCGATGGC+CGG | + | chr3.1:88070077-88070096 | None:intergenic | 50.0% | |
| AGGACATATTCCACTCTGGC+TGG | - | chr3.1:88067481-88067500 | MS.gene40384:CDS | 50.0% | |
| AGGCTATTTATAGGGAGGGG+TGG | + | chr3.1:88068877-88068896 | None:intergenic | 50.0% | |
| AGGGGTGGGTCAAAAATGGT+TGG | + | chr3.1:88068862-88068881 | None:intergenic | 50.0% | |
| AGTGATAGACCCCGACACAT+TGG | - | chr3.1:88070303-88070322 | MS.gene40384:intron | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | - | chr3.1:88069534-88069553 | MS.gene40384:intron | 50.0% | |
| ATTGGACGGGTCGATTGTAG+GGG | - | chr3.1:88070487-88070506 | MS.gene40384:intron | 50.0% | |
| CCACTGGATGGAAGTCCATA+TGG | - | chr3.1:88071118-88071137 | MS.gene40384:intron | 50.0% | |
| CCATATGGACTTCCATCCAG+TGG | + | chr3.1:88071121-88071140 | None:intergenic | 50.0% | |
| CCCAGGTATGTGGAACATAG+GGG | - | chr3.1:88069976-88069995 | MS.gene40384:intron | 50.0% | |
| CCCCTATGTTCCACATACCT+GGG | + | chr3.1:88069979-88069998 | None:intergenic | 50.0% | |
| CCCGACACATTGGAGACAAT+TGG | - | chr3.1:88070313-88070332 | MS.gene40384:intron | 50.0% | |
| CCTGAGATTCAACTTGCCGA+TGG | + | chr3.1:88070081-88070100 | None:intergenic | 50.0% | |
| CCTGGTCGAGGCACAAAAAA+TGG | + | chr3.1:88071439-88071458 | None:intergenic | 50.0% | |
| CTCTGCACATCCCATTGTCA+CGG | - | chr3.1:88070375-88070394 | MS.gene40384:intron | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | + | chr3.1:88069525-88069544 | None:intergenic | 50.0% | |
| CTGTAGGGCTAAGGACATTC+CGG | + | chr3.1:88068643-88068662 | None:intergenic | 50.0% | |
| CTTACCGACAATGCCAACAC+AGG | - | chr3.1:88070220-88070239 | MS.gene40384:intron | 50.0% | |
| GAAAAAAAATAGGGCGCGCG+AGG | - | chr3.1:88069556-88069575 | MS.gene40384:intron | 50.0% | |
| GAAGGAAGAAGAGGAGGAGA+GGG | + | chr3.1:88068936-88068955 | None:intergenic | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | - | chr3.1:88069525-88069544 | MS.gene40384:intron | 50.0% | |
| GAGGATGGTGTGAGAAATGG+TGG | + | chr3.1:88068908-88068927 | None:intergenic | 50.0% | |
| GAGGGTGACTGCTGTTATTG+CGG | - | chr3.1:88070868-88070887 | MS.gene40384:intron | 50.0% | |
| GCCAGAGCTAAGTTCCCTTA+TGG | - | chr3.1:88071642-88071661 | MS.gene40384:CDS | 50.0% | |
| GCCATGACACTGATGCATTC+CGG | + | chr3.1:88068755-88068774 | None:intergenic | 50.0% | |
| GCCCAGGTATGTGGAACATA+GGG | - | chr3.1:88069975-88069994 | MS.gene40384:intron | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | - | chr3.1:88069524-88069543 | MS.gene40384:intron | 50.0% | |
| GGAGAGGATGGTGTGAGAAA+TGG | + | chr3.1:88068911-88068930 | None:intergenic | 50.0% | |
| GGAGCAACAGAGGAAGATGA+TGG | - | chr3.1:88071457-88071476 | MS.gene40384:CDS | 50.0% | |
| GGATGGTGTGAGAAATGGTG+GGG | + | chr3.1:88068906-88068925 | None:intergenic | 50.0% | |
| GGCTATTTATAGGGAGGGGT+GGG | + | chr3.1:88068876-88068895 | None:intergenic | 50.0% | |
| GGGGTGGGTCAAAAATGGTT+GGG | + | chr3.1:88068861-88068880 | None:intergenic | 50.0% | |
| GGTTCATCTGAGGGTCATGT+GGG | - | chr3.1:88069066-88069085 | MS.gene40384:intron | 50.0% | |
| GTGGGTCAAAAATGGTTGGG+AGG | + | chr3.1:88068858-88068877 | None:intergenic | 50.0% | |
| GTTCTTAGCTTCGCCTGTCT+GGG | - | chr3.1:88069097-88069116 | MS.gene40384:intron | 50.0% | |
| GTTGGCATTGTCGGTAAGTG+AGG | + | chr3.1:88070218-88070237 | None:intergenic | 50.0% | |
| TAAGGAATGGCCCAGGTATG+TGG | - | chr3.1:88069966-88069985 | MS.gene40384:intron | 50.0% | |
| TCATCTTCCTCTGTTGCTCC+TGG | + | chr3.1:88071457-88071476 | None:intergenic | 50.0% | |
| TCCCCTATGTTCCACATACC+TGG | + | chr3.1:88069980-88069999 | None:intergenic | 50.0% | |
| TCCGGAATGCATCAGTGTCA+TGG | - | chr3.1:88068751-88068770 | MS.gene40384:CDS | 50.0% | |
| TCTCCTAAGAGCCTAACCAC+TGG | + | chr3.1:88069240-88069259 | None:intergenic | 50.0% | |
| TGTGTCGGGGTCTATCACTA+TGG | + | chr3.1:88070302-88070321 | None:intergenic | 50.0% | |
| ! | CCATCGGCAAGTTGAATCTC+AGG | - | chr3.1:88070078-88070097 | MS.gene40384:intron | 50.0% |
| ! | CCCATTTGCTGACACGTTAC+TGG | + | chr3.1:88068049-88068068 | None:intergenic | 50.0% |
| ! | GAGAAATGGTGGGGTTTGGA+AGG | + | chr3.1:88068897-88068916 | None:intergenic | 50.0% |
| ! | GAGCTAGCAAGCCTTTTCTC+TGG | - | chr3.1:88070190-88070209 | MS.gene40384:intron | 50.0% |
| ! | GCACCACACGTTTTTGTCAG+TGG | - | chr3.1:88068784-88068803 | MS.gene40384:CDS | 50.0% |
| ! | GTGTGAGAAATGGTGGGGTT+TGG | + | chr3.1:88068901-88068920 | None:intergenic | 50.0% |
| !! | AAACTTTTCTCCGGTGGTGG+AGG | + | chr3.1:88067380-88067399 | None:intergenic | 50.0% |
| !! | AACATGGTGTTGATGGTCGC+CGG | + | chr3.1:88067411-88067430 | None:intergenic | 50.0% |
| !! | AGACCTTGGTAAGGGTGTTG+GGG | + | chr3.1:88071273-88071292 | None:intergenic | 50.0% |
| !! | AGGGTGTTGGGGAAGTTACA+AGG | + | chr3.1:88071262-88071281 | None:intergenic | 50.0% |
| !! | GGGTGTTGGGGAAGTTACAA+GGG | + | chr3.1:88071261-88071280 | None:intergenic | 50.0% |
| !!! | CCATTTTTTGTGCCTCGACC+AGG | - | chr3.1:88071436-88071455 | MS.gene40384:CDS | 50.0% |
| AAACCGAAGGAGGAGGGAAG+AGG | + | chr3.1:88069179-88069198 | None:intergenic | 55.0% | |
| AAACGTGTGGTGCAGACCAC+TGG | + | chr3.1:88068777-88068796 | None:intergenic | 55.0% | |
| AACAAATGCCCTGAGGGAGG+TGG | + | chr3.1:88069141-88069160 | None:intergenic | 55.0% | |
| AACACAGGCGTGGTGAAGCT+CGG | - | chr3.1:88070235-88070254 | MS.gene40384:intron | 55.0% | |
| ACAAATGCCCTGAGGGAGGT+GGG | + | chr3.1:88069140-88069159 | None:intergenic | 55.0% | |
| AGGGAGGGGTGGGTCAAAAA+TGG | + | chr3.1:88068866-88068885 | None:intergenic | 55.0% | |
| ATTCCACTCTGGCTGGTGAG+TGG | - | chr3.1:88067488-88067507 | MS.gene40384:CDS | 55.0% | |
| CATCTGAGGGTCATGTGGGT+CGG | - | chr3.1:88069070-88069089 | MS.gene40384:intron | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | - | chr3.1:88069523-88069542 | MS.gene40384:intron | 55.0% | |
| CGGAATGTCCTTAGCCCTAC+AGG | - | chr3.1:88068641-88068660 | MS.gene40384:CDS | 55.0% | |
| CGGTTCATCTGAGGGTCATG+TGG | - | chr3.1:88069065-88069084 | MS.gene40384:intron | 55.0% | |
| CTTCCCCAACACCCTTACCA+AGG | - | chr3.1:88071267-88071286 | MS.gene40384:intron | 55.0% | |
| GAAGAAGAGGAGGAGAGGGT+GGG | + | chr3.1:88068932-88068951 | None:intergenic | 55.0% | |
| GGAAAGGAATGGACCCAACC+GGG | + | chr3.1:88070523-88070542 | None:intergenic | 55.0% | |
| GGAGGAAAACCGAAGGAGGA+GGG | + | chr3.1:88069185-88069204 | None:intergenic | 55.0% | |
| GGCCCAGGTATGTGGAACAT+AGG | - | chr3.1:88069974-88069993 | MS.gene40384:intron | 55.0% | |
| GGGAAAGGAATGGACCCAAC+CGG | + | chr3.1:88070524-88070543 | None:intergenic | 55.0% | |
| GGTTCTTAGCTTCGCCTGTC+TGG | - | chr3.1:88069096-88069115 | MS.gene40384:intron | 55.0% | |
| TCAGCAAATGGGTACCCACC+AGG | - | chr3.1:88068057-88068076 | MS.gene40384:CDS | 55.0% | |
| TGCATCAGTGTCATGGCCAG+TGG | - | chr3.1:88068758-88068777 | MS.gene40384:CDS | 55.0% | |
| TGGAGGAAAACCGAAGGAGG+AGG | + | chr3.1:88069186-88069205 | None:intergenic | 55.0% | |
| TGGCACTTCCTGTAGGGCTA+AGG | + | chr3.1:88068652-88068671 | None:intergenic | 55.0% | |
| TTCCACTCTGGCTGGTGAGT+GGG | - | chr3.1:88067489-88067508 | MS.gene40384:CDS | 55.0% | |
| TTCGTGGCGAGGATGGAAAC+TGG | - | chr3.1:88070445-88070464 | MS.gene40384:intron | 55.0% | |
| ! | CACGCCTGTGTTGGCATTGT+CGG | + | chr3.1:88070227-88070246 | None:intergenic | 55.0% |
| ! | TGGGAGGGTGGTTTGTCTGA+CGG | - | chr3.1:88070261-88070280 | MS.gene40384:intron | 55.0% |
| AAATGCCCTGAGGGAGGTGG+GGG | + | chr3.1:88069138-88069157 | None:intergenic | 60.0% | |
| AACCCACTCACCAGCCAGAG+TGG | + | chr3.1:88067494-88067513 | None:intergenic | 60.0% | |
| AACCGCGCTGCAACGAAGGA+CGG | - | chr3.1:88069045-88069064 | MS.gene40384:intron | 60.0% | |
| AACCGTCCTTCGTTGCAGCG+CGG | + | chr3.1:88069050-88069069 | None:intergenic | 60.0% | |
| AGGGCGCGCGAAAAAGCAGT+AGG | + | chr3.1:88068192-88068211 | None:intergenic | 60.0% | |
| ATGGAACCGCGCTGCAACGA+AGG | - | chr3.1:88069041-88069060 | MS.gene40384:intron | 60.0% | |
| CAAATGCCCTGAGGGAGGTG+GGG | + | chr3.1:88069139-88069158 | None:intergenic | 60.0% | |
| CCTCCTCTTCCCTCCTCCTT+CGG | - | chr3.1:88069173-88069192 | MS.gene40384:intron | 60.0% | |
| CGAAGGAGGAGGGAAGAGGA+GGG | + | chr3.1:88069175-88069194 | None:intergenic | 60.0% | |
| CGACAATGCCAACACAGGCG+TGG | - | chr3.1:88070225-88070244 | MS.gene40384:intron | 60.0% | |
| CGCGCGAAAAAGCAGTAGGG+TGG | + | chr3.1:88068188-88068207 | None:intergenic | 60.0% | |
| CTCGAAGTGAAGGCCGACCA+AGG | + | chr3.1:88070038-88070057 | None:intergenic | 60.0% | |
| CTTGGTCGGCCTTCACTTCG+AGG | - | chr3.1:88070036-88070055 | MS.gene40384:intron | 60.0% | |
| GAAGTGAAGGCCGACCAAGG+TGG | + | chr3.1:88070035-88070054 | None:intergenic | 60.0% | |
| GAGCTTCACCACGCCTGTGT+TGG | + | chr3.1:88070236-88070255 | None:intergenic | 60.0% | |
| GATTGCTCCACCTCCACCAC+CGG | - | chr3.1:88067367-88067386 | MS.gene40384:intron | 60.0% | |
| GCGCGAGGAAATGCATAGGG+TGG | - | chr3.1:88069571-88069590 | MS.gene40384:intron | 60.0% | |
| GCGCTGTGCTCCACAAGCAT+AGG | + | chr3.1:88071239-88071258 | None:intergenic | 60.0% | |
| GCTCAGACTTACGCCCAGAC+AGG | + | chr3.1:88069113-88069132 | None:intergenic | 60.0% | |
| GGAAGAAGAGGAGGAGAGGG+TGG | + | chr3.1:88068933-88068952 | None:intergenic | 60.0% | |
| GGCGCGCGAGGAAATGCATA+GGG | - | chr3.1:88069568-88069587 | MS.gene40384:intron | 60.0% | |
| GGGCGCGCGAAAAAGCAGTA+GGG | + | chr3.1:88068191-88068210 | None:intergenic | 60.0% | |
| GGTGGAGCAATCACACGCGA+TGG | + | chr3.1:88067359-88067378 | None:intergenic | 60.0% | |
| GTCGGCCTTCACTTCGAGGA+CGG | - | chr3.1:88070040-88070059 | MS.gene40384:intron | 60.0% | |
| TCCTCTGTTGCTCCTGGTCG+AGG | + | chr3.1:88071451-88071470 | None:intergenic | 60.0% | |
| TCGGCCTTCACTTCGAGGAC+GGG | - | chr3.1:88070041-88070060 | MS.gene40384:intron | 60.0% | |
| TGTAGGGGCGGTACATCACC+CGG | - | chr3.1:88070502-88070521 | MS.gene40384:intron | 60.0% | |
| ! | AACCAGGGTACTTCGTGGCG+AGG | - | chr3.1:88070434-88070453 | MS.gene40384:intron | 60.0% |
| ! | AGGGTACTTCGTGGCGAGGA+TGG | - | chr3.1:88070438-88070457 | MS.gene40384:intron | 60.0% |
| ! | ATCCTCGCCACGAAGTACCC+TGG | + | chr3.1:88070439-88070458 | None:intergenic | 60.0% |
| ! | CTTTGACGGGTACGCCACCT+TGG | - | chr3.1:88070018-88070037 | MS.gene40384:intron | 60.0% |
| ! | GCTTGCTAGCTCCCCTACGT+AGG | + | chr3.1:88070182-88070201 | None:intergenic | 60.0% |
| !! | ATGGTGTTGATGGTCGCCGG+TGG | + | chr3.1:88067408-88067427 | None:intergenic | 60.0% |
| !!! | CTTTTCTCCGGTGGTGGAGG+TGG | + | chr3.1:88067377-88067396 | None:intergenic | 60.0% |
| AATGCCCTGAGGGAGGTGGG+GGG | + | chr3.1:88069137-88069156 | None:intergenic | 65.0% | |
| ACCGCCCGTCCTCGAAGTGA+AGG | + | chr3.1:88070048-88070067 | None:intergenic | 65.0% | |
| AGAGGAGGAGAGGGTGGGAG+AGG | + | chr3.1:88068927-88068946 | None:intergenic | 65.0% | |
| CCGAAGGAGGAGGGAAGAGG+AGG | + | chr3.1:88069176-88069195 | None:intergenic | 65.0% | |
| GACGGGTACGCCACCTTGGT+CGG | - | chr3.1:88070022-88070041 | MS.gene40384:intron | 65.0% | |
| GAGGACGGGCGGTTAGTAGC+CGG | - | chr3.1:88070055-88070074 | MS.gene40384:intron | 65.0% | |
| GAGGAGAGGGTGGGAGAGGA+TGG | + | chr3.1:88068923-88068942 | None:intergenic | 65.0% | |
| GAGGGTCATGTGGGTCGGTG+TGG | - | chr3.1:88069075-88069094 | MS.gene40384:intron | 65.0% | |
| GCCTCGACCAGGAGCAACAG+AGG | - | chr3.1:88071447-88071466 | MS.gene40384:CDS | 65.0% | |
| GCCTTCACTTCGAGGACGGG+CGG | - | chr3.1:88070044-88070063 | MS.gene40384:intron | 65.0% | |
| GCGTGGTGAAGCTCGGCGAT+GGG | - | chr3.1:88070242-88070261 | MS.gene40384:intron | 65.0% | |
| GGACGGGTCGATTGTAGGGG+CGG | - | chr3.1:88070490-88070509 | MS.gene40384:intron | 65.0% | |
| GGCGGTTAGTAGCCGGCCAT+CGG | - | chr3.1:88070062-88070081 | MS.gene40384:intron | 65.0% | |
| GGGCGCGCGAGGAAATGCAT+AGG | - | chr3.1:88069567-88069586 | MS.gene40384:intron | 65.0% | |
| GGGCGGTACATCACCCGGTT+GGG | - | chr3.1:88070507-88070526 | MS.gene40384:intron | 65.0% | |
| GGTGAAGCTCGGCGATGGGA+GGG | - | chr3.1:88070246-88070265 | MS.gene40384:intron | 65.0% | |
| TGGTGAAGCTCGGCGATGGG+AGG | - | chr3.1:88070245-88070264 | MS.gene40384:intron | 65.0% | |
| AGCACCCCCCACCTCCCTCA+GGG | - | chr3.1:88069130-88069149 | MS.gene40384:intron | 70.0% | |
| GAAGCTCGGCGATGGGAGGG+TGG | - | chr3.1:88070249-88070268 | MS.gene40384:intron | 70.0% | |
| GGAGGAGGGAAGAGGAGGGC+AGG | + | chr3.1:88069171-88069190 | None:intergenic | 70.0% | |
| GGCGTGGTGAAGCTCGGCGA+TGG | - | chr3.1:88070241-88070260 | MS.gene40384:intron | 70.0% | |
| GGGGCGGTACATCACCCGGT+TGG | - | chr3.1:88070506-88070525 | MS.gene40384:intron | 70.0% | |
| GAGCACCCCCCACCTCCCTC+AGG | - | chr3.1:88069129-88069148 | MS.gene40384:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 88067182 | 88071707 | 88067182 | ID=MS.gene40384 |
| chr3.1 | mRNA | 88067182 | 88071707 | 88067182 | ID=MS.gene40384.t1;Parent=MS.gene40384 |
| chr3.1 | exon | 88071387 | 88071707 | 88071387 | ID=MS.gene40384.t1.exon1;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88071387 | 88071707 | 88071387 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| chr3.1 | exon | 88068193 | 88068936 | 88068193 | ID=MS.gene40384.t1.exon2;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88068193 | 88068936 | 88068193 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| chr3.1 | exon | 88067902 | 88068095 | 88067902 | ID=MS.gene40384.t1.exon3;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88067902 | 88068095 | 88067902 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| chr3.1 | exon | 88067601 | 88067790 | 88067601 | ID=MS.gene40384.t1.exon4;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88067601 | 88067790 | 88067601 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| chr3.1 | exon | 88067411 | 88067513 | 88067411 | ID=MS.gene40384.t1.exon5;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88067411 | 88067513 | 88067411 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| chr3.1 | exon | 88067182 | 88067327 | 88067182 | ID=MS.gene40384.t1.exon6;Parent=MS.gene40384.t1 |
| chr3.1 | CDS | 88067182 | 88067327 | 88067182 | ID=cds.MS.gene40384.t1;Parent=MS.gene40384.t1 |
| Gene Sequence |
| Protein sequence |
