Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40446.t1 | XP_024633292.1 | 90.9 | 77 | 6 | 1 | 27 | 103 | 42 | 117 | 8.90E-31 | 143.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40446.t1 | Q29RI6 | 32.4 | 71 | 48 | 0 | 27 | 97 | 39 | 109 | 6.5e-06 | 52.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40446.t1 | B7FJS9 | 90.9 | 77 | 6 | 1 | 27 | 103 | 42 | 117 | 6.4e-31 | 143.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049580 | MS.gene40446 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene051365 | MS.gene40446 | 0.806568 | 7.72E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene40446 | 0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene052947 | MS.gene40446 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene40446 | 0.801931 | 7.13E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene40446 | 0.807542 | 4.81E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene40446 | 0.804176 | 2.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40446.t1 | MTR_2g021040 | 90.909 | 77 | 6 | 1 | 27 | 103 | 42 | 117 | 2.57e-44 | 147 |
| MS.gene40446.t1 | MTR_2g021040 | 90.909 | 77 | 6 | 1 | 27 | 103 | 42 | 117 | 6.15e-44 | 146 |
| MS.gene40446.t1 | MTR_2g021040 | 90.909 | 77 | 6 | 1 | 27 | 103 | 42 | 117 | 1.10e-43 | 146 |
| MS.gene40446.t1 | MTR_0003s0650 | 66.250 | 80 | 25 | 1 | 27 | 104 | 37 | 116 | 1.00e-29 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40446.t1 | AT5G18940 | 69.014 | 71 | 22 | 0 | 27 | 97 | 42 | 112 | 8.28e-30 | 110 |
| MS.gene40446.t1 | AT5G18940 | 69.014 | 71 | 22 | 0 | 27 | 97 | 42 | 112 | 8.55e-30 | 110 |
Find 27 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAAACCTGATCTAAATT+TGG | 0.200028 | 6.2:-75736813 | None:intergenic |
| ACAATGAGAACTATGCTTTC+TGG | 0.269593 | 6.2:+75736774 | MS.gene40446:CDS |
| CGTGTCAAGAGCGGGGTTCT+TGG | 0.312982 | 6.2:+75737186 | MS.gene40446:CDS |
| TACTTTATTGTAGGCATTAG+AGG | 0.313166 | 6.2:+75736731 | MS.gene40446:intron |
| ATTCACAAGTTGCCTATACT+TGG | 0.363293 | 6.2:+75736879 | MS.gene40446:CDS |
| ATATCACTGGAACATATCTA+TGG | 0.374852 | 6.2:-75736649 | None:intergenic |
| ATCAGAACCAAATTTAGATC+AGG | 0.392480 | 6.2:+75736806 | MS.gene40446:CDS |
| CTTACTTCCCATCCAAGTAT+AGG | 0.450135 | 6.2:-75736891 | None:intergenic |
| CAAGAAATCGTGTCAAGAGC+GGG | 0.461491 | 6.2:+75737178 | MS.gene40446:CDS |
| AGAACTATGCTTTCTGGAGA+TGG | 0.464715 | 6.2:+75736780 | MS.gene40446:CDS |
| ACAAGTTGCCTATACTTGGA+TGG | 0.498032 | 6.2:+75736883 | MS.gene40446:CDS |
| GAAAGGATTTAGTCCACTGT+TGG | 0.511448 | 6.2:+75736997 | MS.gene40446:CDS |
| CAAGTTGCCTATACTTGGAT+GGG | 0.523597 | 6.2:+75736884 | MS.gene40446:CDS |
| AGATCAGGTTTCACAGCTTG+TGG | 0.526178 | 6.2:+75736821 | MS.gene40446:CDS |
| CTCGTATCACTCTTCACCCA+CGG | 0.572581 | 6.2:-75737213 | None:intergenic |
| ATGTGTCATCAGTTTGTCGT+GGG | 0.590916 | 6.2:+75736579 | MS.gene40446:intron |
| TATGTGTCATCAGTTTGTCG+TGG | 0.606966 | 6.2:+75736578 | MS.gene40446:intron |
| GAGTGAACACGGTTGATGCT+TGG | 0.608303 | 6.2:-75737140 | None:intergenic |
| CGGGGTTCTTGGAACACCGT+GGG | 0.615525 | 6.2:+75737197 | MS.gene40446:CDS |
| TCAGGTTTCACAGCTTGTGG+AGG | 0.621980 | 6.2:+75736824 | MS.gene40446:CDS |
| TCAAGAAATCGTGTCAAGAG+CGG | 0.632895 | 6.2:+75737177 | MS.gene40446:CDS |
| AAGAAATCGTGTCAAGAGCG+GGG | 0.665713 | 6.2:+75737179 | MS.gene40446:CDS |
| GCTTGTGGAGGAAATCTGCA+AGG | 0.666944 | 6.2:+75736836 | MS.gene40446:CDS |
| TCAACAATATCGTCCAACAG+TGG | 0.680311 | 6.2:-75737010 | None:intergenic |
| GCGGGGTTCTTGGAACACCG+TGG | 0.682296 | 6.2:+75737196 | MS.gene40446:CDS |
| CGTGGGTGAAGAGTGATACG+AGG | 0.709427 | 6.2:+75737214 | MS.gene40446:CDS |
| TGTGGAGGAAATCTGCAAGG+AGG | 0.743747 | 6.2:+75736839 | MS.gene40446:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATACTTATGAAATA+CGG | - | chr6.2:75735402-75735421 | None:intergenic | 10.0% |
| !! | TAAAATTACTCATAAATATA+TGG | + | chr6.2:75736435-75736454 | MS.gene40446:intron | 10.0% |
| !!! | AAAAGATATGATTTTTTAAT+TGG | + | chr6.2:75735063-75735082 | MS.gene40446:intron | 10.0% |
| !!! | ATGTTTTTTATTTATAGAAA+TGG | + | chr6.2:75735310-75735329 | MS.gene40446:intron | 10.0% |
| !!! | ATACATATCATTACTATTTT+TGG | + | chr6.2:75735993-75736012 | MS.gene40446:intron | 15.0% |
| !!! | TACATATCATTACTATTTTT+GGG | + | chr6.2:75735994-75736013 | MS.gene40446:intron | 15.0% |
| !! | AAAGAAGATTAAAGTTCAAA+CGG | - | chr6.2:75735779-75735798 | None:intergenic | 20.0% |
| !! | AAATATTGTACATAAAAGCA+AGG | - | chr6.2:75736245-75736264 | None:intergenic | 20.0% |
| !! | AATTAAGCTGTTTATTCAAA+CGG | + | chr6.2:75735364-75735383 | MS.gene40446:intron | 20.0% |
| !! | TTTAAGCCTAAAAATTTGAA+AGG | - | chr6.2:75735570-75735589 | None:intergenic | 20.0% |
| !! | TTTGAGAACTTATGAAAATA+AGG | - | chr6.2:75735257-75735276 | None:intergenic | 20.0% |
| !!! | AACACTATCAAGATTTTTAT+TGG | - | chr6.2:75736305-75736324 | None:intergenic | 20.0% |
| !!! | ATTTCACTTCTTTTCATTTT+GGG | + | chr6.2:75735960-75735979 | MS.gene40446:intron | 20.0% |
| !!! | TAGTTATTTTTAGTTTGTGA+AGG | + | chr6.2:75737065-75737084 | MS.gene40446:intron | 20.0% |
| !!! | TCTTTTCCTTTCAAATTTTT+AGG | + | chr6.2:75735561-75735580 | MS.gene40446:intron | 20.0% |
| ! | AATATATGGAAAATGCTTGT+TGG | + | chr6.2:75736449-75736468 | MS.gene40446:intron | 25.0% |
| ! | ATTAAGCTGTTTATTCAAAC+GGG | + | chr6.2:75735365-75735384 | MS.gene40446:intron | 25.0% |
| ! | ATTGGACTATACTAAAAAAC+TGG | + | chr6.2:75735453-75735472 | MS.gene40446:intron | 25.0% |
| ! | CTGCAATAAAGTGATAATAA+CGG | - | chr6.2:75735939-75735958 | None:intergenic | 25.0% |
| ! | GAAGAATAAAAATAGTGTAG+TGG | + | chr6.2:75737236-75737255 | MS.gene40446:CDS | 25.0% |
| ! | TCAAAGATAGCTTATGAAAA+TGG | + | chr6.2:75735272-75735291 | MS.gene40446:intron | 25.0% |
| ! | TGCAATAAAGTGATAATAAC+GGG | - | chr6.2:75735938-75735957 | None:intergenic | 25.0% |
| ! | TTGGACTATACTAAAAAACT+GGG | + | chr6.2:75735454-75735473 | MS.gene40446:intron | 25.0% |
| ! | TTGTTGAAGTCTGAAAAATT+TGG | + | chr6.2:75737026-75737045 | MS.gene40446:CDS | 25.0% |
| !! | CATTTCACTTCTTTTCATTT+TGG | + | chr6.2:75735959-75735978 | MS.gene40446:intron | 25.0% |
| !! | TGCATTTTACAACTTAATGT+TGG | + | chr6.2:75736072-75736091 | MS.gene40446:intron | 25.0% |
| !!! | ATTTTTAGTTTGTGAAGGTT+CGG | + | chr6.2:75737070-75737089 | MS.gene40446:intron | 25.0% |
| !!! | TGCTTGTTTTACTTTATTGT+AGG | + | chr6.2:75736722-75736741 | MS.gene40446:intron | 25.0% |
| AAGTTAGCAAGAATGACTAA+CGG | - | chr6.2:75735672-75735691 | None:intergenic | 30.0% | |
| ATAAATCTGATCAGTAACAG+TGG | - | chr6.2:75735730-75735749 | None:intergenic | 30.0% | |
| ATAAATTCTATTCCTTGCCA+AGG | + | chr6.2:75735501-75735520 | MS.gene40446:intron | 30.0% | |
| ATATCACTGGAACATATCTA+TGG | - | chr6.2:75736652-75736671 | None:intergenic | 30.0% | |
| ATCAGAACCAAATTTAGATC+AGG | + | chr6.2:75736806-75736825 | MS.gene40446:CDS | 30.0% | |
| CAATTAGTAGTAAGAACAAC+AGG | - | chr6.2:75735828-75735847 | None:intergenic | 30.0% | |
| TACTAATTGAAATGTTGTGC+AGG | + | chr6.2:75735839-75735858 | MS.gene40446:intron | 30.0% | |
| TACTTTATTGTAGGCATTAG+AGG | + | chr6.2:75736731-75736750 | MS.gene40446:intron | 30.0% | |
| TATACTAAAAAACTGGGGTT+TGG | + | chr6.2:75735460-75735479 | MS.gene40446:intron | 30.0% | |
| TCTTGATCTATCAGTACTAT+TGG | - | chr6.2:75736334-75736353 | None:intergenic | 30.0% | |
| TGGACTATACTAAAAAACTG+GGG | + | chr6.2:75735455-75735474 | MS.gene40446:intron | 30.0% | |
| TGTGAAACCTGATCTAAATT+TGG | - | chr6.2:75736816-75736835 | None:intergenic | 30.0% | |
| TTAACAAAAGCTCAGATTCT+TGG | - | chr6.2:75736180-75736199 | None:intergenic | 30.0% | |
| TTGAAGTTTATGAGACAGTT+TGG | + | chr6.2:75735176-75735195 | MS.gene40446:intron | 30.0% | |
| ! | AAAGAAAGGCATAATATCAC+TGG | - | chr6.2:75736665-75736684 | None:intergenic | 30.0% |
| ! | AAGTCTGAAAAATTTGGTGA+AGG | + | chr6.2:75737032-75737051 | MS.gene40446:intron | 30.0% |
| ! | ACATCTTTTTCTCTTGTCAT+TGG | + | chr6.2:75735435-75735454 | MS.gene40446:intron | 30.0% |
| ! | ATTTGATGATCTTCATCATG+TGG | - | chr6.2:75737100-75737119 | None:intergenic | 30.0% |
| !! | AATTTTGATACAGGCTAGAA+AGG | + | chr6.2:75736980-75736999 | MS.gene40446:intron | 30.0% |
| !! | GAGTAATTTTAGTGCTTGTT+TGG | - | chr6.2:75736426-75736445 | None:intergenic | 30.0% |
| !!! | TTTTTAGTTTGTGAAGGTTC+GGG | + | chr6.2:75737071-75737090 | MS.gene40446:intron | 30.0% |
| ACAATGAGAACTATGCTTTC+TGG | + | chr6.2:75736774-75736793 | MS.gene40446:CDS | 35.0% | |
| AGCAACTGCAAGTAAAAGAA+AGG | - | chr6.2:75736679-75736698 | None:intergenic | 35.0% | |
| AGTTAGCAAGAATGACTAAC+GGG | - | chr6.2:75735671-75735690 | None:intergenic | 35.0% | |
| ATTCACAAGTTGCCTATACT+TGG | + | chr6.2:75736879-75736898 | MS.gene40446:CDS | 35.0% | |
| GAATAACCTATCCATAGTGA+AGG | - | chr6.2:75735608-75735627 | None:intergenic | 35.0% | |
| GTTAGTCATTCTTGCTAACT+TGG | + | chr6.2:75735671-75735690 | MS.gene40446:intron | 35.0% | |
| TCTATCAGTACTATTGGCAT+TGG | - | chr6.2:75736328-75736347 | None:intergenic | 35.0% | |
| ! | GTCTTTTATTCGAGTGAACA+CGG | - | chr6.2:75737154-75737173 | None:intergenic | 35.0% |
| ! | TTTGTGCTGGTGTAAGATAA+TGG | + | chr6.2:75736129-75736148 | MS.gene40446:intron | 35.0% |
| !! | TCTTTCAAGTTAATACAGCG+TGG | + | chr6.2:75736399-75736418 | MS.gene40446:intron | 35.0% |
| AAACGGTGTTCACAAACAAC+TGG | - | chr6.2:75735762-75735781 | None:intergenic | 40.0% | |
| ACAAGTTGCCTATACTTGGA+TGG | + | chr6.2:75736883-75736902 | MS.gene40446:CDS | 40.0% | |
| ACCCATCTAAAAAGACCAGA+GGG | - | chr6.2:75736219-75736238 | None:intergenic | 40.0% | |
| AGTCTCCAATCCTAAAAACC+TGG | + | chr6.2:75735694-75735713 | MS.gene40446:intron | 40.0% | |
| ATGTGTCATCAGTTTGTCGT+GGG | + | chr6.2:75736579-75736598 | MS.gene40446:intron | 40.0% | |
| ATTCTATTCCTTGCCAAGGA+TGG | + | chr6.2:75735505-75735524 | MS.gene40446:intron | 40.0% | |
| CAAGTTGCCTATACTTGGAT+GGG | + | chr6.2:75736884-75736903 | MS.gene40446:CDS | 40.0% | |
| CTCATTTACCACCTTCACTA+TGG | + | chr6.2:75735594-75735613 | MS.gene40446:intron | 40.0% | |
| CTTACTTCCCATCCAAGTAT+AGG | - | chr6.2:75736894-75736913 | None:intergenic | 40.0% | |
| GAAAGGATTTAGTCCACTGT+TGG | + | chr6.2:75736997-75737016 | MS.gene40446:CDS | 40.0% | |
| GATCAAGACTCAGATTCTGA+TGG | + | chr6.2:75736346-75736365 | MS.gene40446:intron | 40.0% | |
| GTTAGCAAGAATGACTAACG+GGG | - | chr6.2:75735670-75735689 | None:intergenic | 40.0% | |
| TAACCTATCCATAGTGAAGG+TGG | - | chr6.2:75735605-75735624 | None:intergenic | 40.0% | |
| TACCCATCTAAAAAGACCAG+AGG | - | chr6.2:75736220-75736239 | None:intergenic | 40.0% | |
| TACTCCTTATATGTACCCTC+TGG | + | chr6.2:75736201-75736220 | MS.gene40446:intron | 40.0% | |
| TACTTGCAGTTGCTCTACAT+TGG | + | chr6.2:75736685-75736704 | MS.gene40446:intron | 40.0% | |
| TAGGTTATTCGACATTCAGC+TGG | + | chr6.2:75735618-75735637 | MS.gene40446:intron | 40.0% | |
| TATGTGTCATCAGTTTGTCG+TGG | + | chr6.2:75736578-75736597 | MS.gene40446:intron | 40.0% | |
| TCAACAATATCGTCCAACAG+TGG | - | chr6.2:75737013-75737032 | None:intergenic | 40.0% | |
| TCAAGAAATCGTGTCAAGAG+CGG | + | chr6.2:75737177-75737196 | MS.gene40446:CDS | 40.0% | |
| TTACCACCTTCACTATGGAT+AGG | + | chr6.2:75735599-75735618 | MS.gene40446:intron | 40.0% | |
| ! | AAGACCAGAGGGTACATATA+AGG | - | chr6.2:75736208-75736227 | None:intergenic | 40.0% |
| ! | AAGTGCCGTGTTTCATCTAA+GGG | - | chr6.2:75736521-75736540 | None:intergenic | 40.0% |
| ! | AGAACTATGCTTTCTGGAGA+TGG | + | chr6.2:75736780-75736799 | MS.gene40446:CDS | 40.0% |
| ! | AGTTGCTCTACATTGGTTAC+TGG | + | chr6.2:75736692-75736711 | MS.gene40446:intron | 40.0% |
| ! | ATGCATGCAGTTGACTTAAC+TGG | + | chr6.2:75736937-75736956 | MS.gene40446:intron | 40.0% |
| !! | AAAGTGCCGTGTTTCATCTA+AGG | - | chr6.2:75736522-75736541 | None:intergenic | 40.0% |
| !! | ACCCTCTGGTCTTTTTAGAT+GGG | + | chr6.2:75736215-75736234 | MS.gene40446:intron | 40.0% |
| !! | GGGTGCATGAATTTTGATAC+AGG | + | chr6.2:75736971-75736990 | MS.gene40446:intron | 40.0% |
| !! | TACCCTCTGGTCTTTTTAGA+TGG | + | chr6.2:75736214-75736233 | MS.gene40446:intron | 40.0% |
| AAGAAATCGTGTCAAGAGCG+GGG | + | chr6.2:75737179-75737198 | MS.gene40446:CDS | 45.0% | |
| ACTTAACTGGTTGCTCATCG+TGG | + | chr6.2:75736950-75736969 | MS.gene40446:intron | 45.0% | |
| AGATCAGGTTTCACAGCTTG+TGG | + | chr6.2:75736821-75736840 | MS.gene40446:CDS | 45.0% | |
| AGCTGTGGTGTAAAGCAGTA+AGG | - | chr6.2:75736028-75736047 | None:intergenic | 45.0% | |
| CAACAGGTATAGATACCTCG+TGG | - | chr6.2:75735812-75735831 | None:intergenic | 45.0% | |
| CAAGAAATCGTGTCAAGAGC+GGG | + | chr6.2:75737178-75737197 | MS.gene40446:CDS | 45.0% | |
| CTAATAAGCTCGACTAGCGA+TGG | + | chr6.2:75736480-75736499 | MS.gene40446:intron | 45.0% | |
| CTTAACTGGTTGCTCATCGT+GGG | + | chr6.2:75736951-75736970 | MS.gene40446:intron | 45.0% | |
| TATTCCTTGCCAAGGATGGA+GGG | + | chr6.2:75735509-75735528 | MS.gene40446:intron | 45.0% | |
| TCTTTACTAGAGTCACCACG+AGG | + | chr6.2:75735794-75735813 | MS.gene40446:intron | 45.0% | |
| TGCAGTAGATTCAGCTTCAC+TGG | + | chr6.2:75735894-75735913 | MS.gene40446:intron | 45.0% | |
| !!! | CTGAGCCAGGTTTTTAGGAT+TGG | - | chr6.2:75735702-75735721 | None:intergenic | 45.0% |
| CTATTCCTTGCCAAGGATGG+AGG | + | chr6.2:75735508-75735527 | MS.gene40446:intron | 50.0% | |
| CTCGTATCACTCTTCACCCA+CGG | - | chr6.2:75737216-75737235 | None:intergenic | 50.0% | |
| GCCGACCCTTAGATGAAACA+CGG | + | chr6.2:75736513-75736532 | MS.gene40446:intron | 50.0% | |
| GCCGTGTTTCATCTAAGGGT+CGG | - | chr6.2:75736517-75736536 | None:intergenic | 50.0% | |
| GCTTGTGGAGGAAATCTGCA+AGG | + | chr6.2:75736836-75736855 | MS.gene40446:CDS | 50.0% | |
| GTCTGTGTCTGAGTTTGTGC+TGG | + | chr6.2:75736116-75736135 | MS.gene40446:intron | 50.0% | |
| TCAGGTTTCACAGCTTGTGG+AGG | + | chr6.2:75736824-75736843 | MS.gene40446:CDS | 50.0% | |
| TGTGGAGGAAATCTGCAAGG+AGG | + | chr6.2:75736839-75736858 | MS.gene40446:CDS | 50.0% | |
| ! | CTGTGCTGAGCCAGGTTTTT+AGG | - | chr6.2:75735707-75735726 | None:intergenic | 50.0% |
| ! | GAGTGAACACGGTTGATGCT+TGG | - | chr6.2:75737143-75737162 | None:intergenic | 50.0% |
| ! | GGTTTGGTTCACTTGAGTCG+AGG | + | chr6.2:75735476-75735495 | MS.gene40446:intron | 50.0% |
| CGTGGGTGAAGAGTGATACG+AGG | + | chr6.2:75737214-75737233 | MS.gene40446:CDS | 55.0% | |
| GCACACGAGCTACACATGTG+TGG | - | chr6.2:75736055-75736074 | None:intergenic | 55.0% | |
| ! | CACATGTGTGGTGTCAGCTG+TGG | - | chr6.2:75736043-75736062 | None:intergenic | 55.0% |
| AACAGTGGCTGTGCTGAGCC+AGG | - | chr6.2:75735715-75735734 | None:intergenic | 60.0% | |
| CCTTGCCAAGGATGGAGGGA+GGG | + | chr6.2:75735513-75735532 | MS.gene40446:intron | 60.0% | |
| CGGGGTTCTTGGAACACCGT+GGG | + | chr6.2:75737197-75737216 | MS.gene40446:CDS | 60.0% | |
| CGTGTCAAGAGCGGGGTTCT+TGG | + | chr6.2:75737186-75737205 | MS.gene40446:CDS | 60.0% | |
| CTTGCCAAGGATGGAGGGAG+GGG | + | chr6.2:75735514-75735533 | MS.gene40446:intron | 60.0% | |
| TCCTTGCCAAGGATGGAGGG+AGG | + | chr6.2:75735512-75735531 | MS.gene40446:intron | 60.0% | |
| TTGCCAAGGATGGAGGGAGG+GGG | + | chr6.2:75735515-75735534 | MS.gene40446:intron | 60.0% | |
| ATGGAGGGAGGGGGTGGCTA+CGG | + | chr6.2:75735524-75735543 | MS.gene40446:intron | 65.0% | |
| CCCTCCCTCCATCCTTGGCA+AGG | - | chr6.2:75735516-75735535 | None:intergenic | 65.0% | |
| GCGGGGTTCTTGGAACACCG+TGG | + | chr6.2:75737196-75737215 | MS.gene40446:CDS | 65.0% | |
| CCAAGGATGGAGGGAGGGGG+TGG | + | chr6.2:75735518-75735537 | MS.gene40446:intron | 70.0% | |
| CCACCCCCTCCCTCCATCCT+TGG | - | chr6.2:75735521-75735540 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 75735014 | 75737263 | 75735014 | ID=MS.gene40446 |
| chr6.2 | mRNA | 75735014 | 75737263 | 75735014 | ID=MS.gene40446.t1;Parent=MS.gene40446 |
| chr6.2 | exon | 75735014 | 75735017 | 75735014 | ID=MS.gene40446.t1.exon1;Parent=MS.gene40446.t1 |
| chr6.2 | CDS | 75735014 | 75735017 | 75735014 | ID=cds.MS.gene40446.t1;Parent=MS.gene40446.t1 |
| chr6.2 | exon | 75736591 | 75736664 | 75736591 | ID=MS.gene40446.t1.exon2;Parent=MS.gene40446.t1 |
| chr6.2 | CDS | 75736591 | 75736664 | 75736591 | ID=cds.MS.gene40446.t1;Parent=MS.gene40446.t1 |
| chr6.2 | exon | 75736744 | 75736908 | 75736744 | ID=MS.gene40446.t1.exon3;Parent=MS.gene40446.t1 |
| chr6.2 | CDS | 75736744 | 75736908 | 75736744 | ID=cds.MS.gene40446.t1;Parent=MS.gene40446.t1 |
| chr6.2 | exon | 75736993 | 75737047 | 75736993 | ID=MS.gene40446.t1.exon4;Parent=MS.gene40446.t1 |
| chr6.2 | CDS | 75736993 | 75737047 | 75736993 | ID=cds.MS.gene40446.t1;Parent=MS.gene40446.t1 |
| chr6.2 | exon | 75737127 | 75737263 | 75737127 | ID=MS.gene40446.t1.exon5;Parent=MS.gene40446.t1 |
| chr6.2 | CDS | 75737127 | 75737263 | 75737127 | ID=cds.MS.gene40446.t1;Parent=MS.gene40446.t1 |
| Gene Sequence |
| Protein sequence |
