AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40712

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40712.t1 MTR_3g110240 98.036 662 11 2 25 685 21 681 0.0 1355
MS.gene40712.t1 MTR_1g007150 79.360 688 132 5 2 685 3 684 0.0 1126
MS.gene40712.t1 MTR_7g006030 78.130 599 121 2 92 684 4 598 0.0 1018
MS.gene40712.t1 MTR_8g014050 77.961 608 123 3 85 685 88 691 0.0 986
MS.gene40712.t1 MTR_1g116210 74.590 610 144 4 82 684 70 675 0.0 977
MS.gene40712.t1 MTR_7g085540 74.958 595 140 2 95 684 117 707 0.0 967
MS.gene40712.t1 MTR_4g126010 39.927 273 153 5 125 394 9 273 1.49e-59 207
MS.gene40712.t1 MTR_2g099670 38.828 273 156 5 125 394 9 273 2.96e-58 204
MS.gene40712.t1 MTR_2g039930 38.828 273 156 5 125 394 9 273 1.77e-57 202
MS.gene40712.t1 MTR_1g042280 38.434 281 160 6 117 394 4 274 1.82e-56 199
MS.gene40712.t1 MTR_1g075870 38.710 279 158 6 119 394 6 274 2.16e-56 195
MS.gene40712.t1 MTR_8g018310 38.951 267 151 6 125 388 9 266 2.45e-56 199
MS.gene40712.t1 MTR_7g097160 38.828 273 156 5 125 394 9 273 2.47e-56 199
MS.gene40712.t1 MTR_8g018310 38.951 267 151 6 125 388 9 266 5.30e-56 196
MS.gene40712.t1 MTR_1g075870 38.710 279 158 6 119 394 6 274 1.98e-55 196
MS.gene40712.t1 MTR_1g069720 37.276 279 162 6 119 394 5 273 5.08e-54 192
MS.gene40712.t1 MTR_0492s0030 38.163 283 160 6 117 394 3 275 2.34e-53 188
MS.gene40712.t1 MTR_0543s0020 38.163 283 160 6 117 394 3 275 2.34e-53 188
MS.gene40712.t1 MTR_8g102930 37.993 279 160 6 119 394 5 273 4.62e-53 189
MS.gene40712.t1 MTR_1g004990 37.102 283 164 7 115 394 2 273 5.93e-53 188
MS.gene40712.t1 MTR_6g087070 36.630 273 162 5 125 394 9 273 1.35e-52 187
MS.gene40712.t1 MTR_3g110180 36.201 279 165 6 119 394 5 273 2.78e-52 187
MS.gene40712.t1 MTR_3g110180 36.201 279 164 7 119 394 5 272 1.01e-50 182
MS.gene40712.t1 MTR_1g042280 39.823 226 130 3 172 394 20 242 7.23e-50 176
MS.gene40712.t1 MTR_2g099670 40.376 213 121 3 185 394 12 221 8.63e-48 174
MS.gene40712.t1 MTR_1g075870 39.908 218 125 3 180 394 3 217 5.22e-47 168
MS.gene40712.t1 MTR_2g039930 41.026 195 109 3 203 394 1 192 6.57e-42 157
MS.gene40712.t1 MTR_1g116205 65.049 103 29 3 82 177 70 172 1.47e-33 127
MS.gene40712.t1 MTR_7g097160 43.511 131 70 2 267 394 25 154 1.38e-27 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40712.t1 AT2G25760 76.046 693 138 7 1 685 1 673 0.0 1098
MS.gene40712.t1 AT2G25760 75.431 696 140 8 1 685 1 676 0.0 1088
MS.gene40712.t1 AT3G13670 70.360 695 183 6 1 685 22 703 0.0 1020
MS.gene40712.t1 AT3G03940 73.770 610 149 3 82 684 95 700 0.0 969
MS.gene40712.t1 AT5G18190 73.927 606 147 3 86 684 89 690 0.0 966
MS.gene40712.t1 AT5G18190 73.927 606 147 3 86 684 89 690 0.0 966
MS.gene40712.t1 AT3G03930 69.388 245 74 1 441 684 43 287 2.36e-121 363
MS.gene40712.t1 AT4G26100 39.194 273 155 5 125 394 9 273 1.60e-58 204
MS.gene40712.t1 AT2G19470 39.560 273 154 5 125 394 9 273 6.83e-58 202
MS.gene40712.t1 AT3G23340 39.427 279 156 6 119 394 5 273 6.84e-58 202
MS.gene40712.t1 AT1G03930 38.790 281 159 6 117 394 3 273 8.67e-58 203
MS.gene40712.t1 AT1G72710 39.194 273 154 6 125 394 9 272 9.13e-57 200
MS.gene40712.t1 AT5G44100 37.367 281 163 6 117 394 3 273 1.24e-56 200
MS.gene40712.t1 AT5G44100 37.367 281 163 6 117 394 3 273 1.24e-56 200
MS.gene40712.t1 AT5G57015 38.462 273 157 5 125 394 9 273 1.26e-56 199
MS.gene40712.t1 AT4G14340 39.068 279 157 6 119 394 11 279 1.67e-56 196
MS.gene40712.t1 AT4G14340 39.068 279 157 6 119 394 11 279 3.00e-56 198
MS.gene40712.t1 AT4G28540 37.993 279 160 6 119 394 9 277 1.38e-55 197
MS.gene40712.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.72e-55 197
MS.gene40712.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.09e-54 192
MS.gene40712.t1 AT5G43320 39.068 279 157 6 119 394 5 273 1.09e-54 192
MS.gene40712.t1 AT4G28860 37.993 279 160 6 119 394 5 273 1.84e-54 191
MS.gene40712.t1 AT1G04440 37.993 279 160 6 119 394 5 273 1.99e-54 194
MS.gene40712.t1 AT4G28860 37.993 279 160 6 119 394 5 273 5.81e-54 191
MS.gene40712.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene40712.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene40712.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene40712.t1 AT4G28880 38.351 279 159 6 119 394 5 273 8.75e-54 191
MS.gene40712.t1 AT3G23340 38.697 261 149 5 137 394 7 259 6.93e-51 183
MS.gene40712.t1 AT4G08800 34.066 273 137 6 125 394 9 241 1.95e-42 155

Find 192 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTACAATTCCATCAAAA+AGG 0.194189 3.2:-88393534 None:intergenic
TCTGAGCACCCTCGGTATTT+AGG 0.209029 3.2:-88393576 None:intergenic
CCCATTCGGACCTTCTTCTT+TGG 0.219272 3.2:-88393756 None:intergenic
CTGAGCACCCTCGGTATTTA+GGG 0.247642 3.2:-88393575 None:intergenic
CTTTCCCAACACATTGTAAA+AGG 0.251961 3.2:+88393942 MS.gene40712:CDS
TGGCTTCTTGTGCTAGTCTT+TGG 0.253271 3.2:+88393994 MS.gene40712:CDS
AAGCTTGGGAAGGGAGGATT+TGG 0.257494 3.2:+88390904 MS.gene40712:CDS
TGTTTCACAGGAATGGATTA+TGG 0.259630 3.2:+88394210 MS.gene40712:intron
ATCAACGCCCAGATGTATTT+AGG 0.259852 3.2:+88393035 MS.gene40712:CDS
CTTCTGCCTCCGATTCCTTC+TGG 0.270294 3.2:-88390409 None:intergenic
AAACGAGTCACTGACTTTAT+AGG 0.282911 3.2:-88394467 None:intergenic
GGCTTCTTGTGCTAGTCTTT+GGG 0.284395 3.2:+88393995 MS.gene40712:CDS
ATATGCTTGGCTCTAGTCTA+TGG 0.295213 3.2:+88391586 MS.gene40712:CDS
TGGCCACTGCTGGCACTAGA+TGG 0.300589 3.2:+88394542 MS.gene40712:CDS
TATAGGATTGTTGCATGTAT+TGG 0.306085 3.2:-88394450 None:intergenic
GCTCAAAACCTTTGTTTCAT+TGG 0.309003 3.2:-88393822 None:intergenic
TAAGAAGAAGGCAGTGGTTA+GGG 0.314293 3.2:+88390530 MS.gene40712:CDS
AGGGGCCTAATGTCAGGATT+TGG 0.316161 3.2:-88393556 None:intergenic
GCTCTAGTCTATGGGATGTT+TGG 0.316967 3.2:+88391595 MS.gene40712:CDS
TTCGGCTCCCGGAGCTTTAT+CGG 0.329884 3.2:-88390601 None:intergenic
ATAGGATTGTTGCATGTATT+GGG 0.335579 3.2:-88394449 None:intergenic
TTTCTGGTTGATCTTGGATT+AGG 0.337171 3.2:+88392890 MS.gene40712:CDS
ACCAACCTTGTGAAGAAAAC+TGG 0.342759 3.2:-88394072 None:intergenic
TAGTCTTTGGGCACTCATTA+TGG 0.347322 3.2:+88394007 MS.gene40712:CDS
GTGAATAACGACGACGAAAC+AGG 0.354236 3.2:+88390474 MS.gene40712:CDS
ACACTAATCCACTGTGTTGC+TGG 0.363197 3.2:-88393783 None:intergenic
GTTACCTTGGCAAGGATATC+AGG 0.363733 3.2:+88393253 MS.gene40712:CDS
TTCCTATCTAATCTATATAA+TGG 0.369860 3.2:-88390883 None:intergenic
CTCCCTTCTTCTTCGGCTCC+CGG 0.370094 3.2:-88390612 None:intergenic
AGAACAAACCTAAATACATC+TGG 0.381852 3.2:-88393043 None:intergenic
TTGTTACAGGGAGAAAATAA+AGG 0.383335 3.2:+88393373 MS.gene40712:intron
GCAAGGTGACTACTACATTA+TGG 0.384482 3.2:+88391475 MS.gene40712:CDS
CTCATTATGGATGCTGGCAC+TGG 0.386456 3.2:+88394020 MS.gene40712:CDS
AACAGCAAAGGGTGCAATTA+CGG 0.391275 3.2:+88391278 MS.gene40712:CDS
TATAGATTAGATAGGAAGCT+TGG 0.395411 3.2:+88390889 MS.gene40712:CDS
TATATCGCATCTATTAGTTA+TGG 0.395955 3.2:+88394987 MS.gene40712:CDS
ATAAGAAGAAGGCAGTGGTT+AGG 0.397165 3.2:+88390529 MS.gene40712:CDS
AACTTCTTGCTTGGACCCTC+GGG 0.405644 3.2:+88392845 MS.gene40712:CDS
CGCCGCCGGTCGCCGGCGGG+AGG 0.407045 3.2:+88390358 MS.gene40712:CDS
ACGCGCCGCCGGTCGCCGGC+GGG 0.411110 3.2:+88390355 MS.gene40712:CDS
GTGACTCGTTTCCATTTAAG+TGG 0.412212 3.2:+88394479 MS.gene40712:CDS
AGTTGTACTCCCTTCTTCTT+CGG 0.412608 3.2:-88390619 None:intergenic
AAGTTGTTTCTGGTTGATCT+TGG 0.425523 3.2:+88392884 MS.gene40712:CDS
CTCCATTATATAGATTAGAT+AGG 0.426261 3.2:+88390881 MS.gene40712:CDS
ATATCGCATCTATTAGTTAT+GGG 0.426501 3.2:+88394988 MS.gene40712:CDS
GGAATCAAAATCACCTTCTC+AGG 0.426563 3.2:-88390648 None:intergenic
ATTGTTATGTCCCGTGGTGC+TGG 0.431009 3.2:+88394568 MS.gene40712:CDS
CGACGCGTAGGAGCTGGTTC+TGG 0.431637 3.2:+88390943 MS.gene40712:CDS
AAACTTCTTGCTTGGACCCT+CGG 0.431706 3.2:+88392844 MS.gene40712:CDS
GATAGGAAGCTTGGGAAGGG+AGG 0.432226 3.2:+88390898 MS.gene40712:CDS
TTCTTCGTGGTCGGTTACCT+TGG 0.433456 3.2:+88393240 MS.gene40712:CDS
CAAAAGCAACACAAAGCTTC+GGG 0.436504 3.2:-88393430 None:intergenic
AACGCGCCGCCGGTCGCCGG+CGG 0.437647 3.2:+88390354 MS.gene40712:CDS
CCTTCTGGTCTGTGCGGCGG+TGG 0.439587 3.2:-88390394 None:intergenic
GTCACTGCTATGGCCACTGC+TGG 0.440107 3.2:+88394532 MS.gene40712:CDS
AGCGTTTCTTGAGTTTCATC+AGG 0.442256 3.2:-88394828 None:intergenic
ACGCTTGTCTTCCTTCTTCG+TGG 0.445559 3.2:+88393227 MS.gene40712:CDS
TAGGTCCAAATCCTGACATT+AGG 0.445820 3.2:+88393551 MS.gene40712:CDS
TGTTGTGAAGCTTATATGTC+AGG 0.445999 3.2:+88393683 MS.gene40712:intron
ACAAAAGCAACACAAAGCTT+CGG 0.446009 3.2:-88393431 None:intergenic
AAAATAAAAGCAGCTTGATC+AGG 0.446910 3.2:-88394783 None:intergenic
AAGCCTGAAAACTTCTTGCT+TGG 0.452042 3.2:+88392836 MS.gene40712:CDS
GTATTTAGGGGCCTAATGTC+AGG 0.452090 3.2:-88393562 None:intergenic
CGTTGGCGTGATAGTTCAAC+TGG 0.453748 3.2:+88392995 MS.gene40712:CDS
CTGTGCGGCGGTGGCAGCGA+CGG 0.454161 3.2:-88390385 None:intergenic
TTTACCTTAACATGAGTACT+AGG 0.455799 3.2:-88394867 None:intergenic
TATTACATCAGTGCCATAGC+TGG 0.456706 3.2:+88394250 MS.gene40712:CDS
GTTGGCCGACGCGTAGGAGC+TGG 0.466210 3.2:+88390937 MS.gene40712:CDS
AAAATCACCTTCTCAGGAAG+TGG 0.470398 3.2:-88390642 None:intergenic
CTCCTCCCGCCGGCGACCGG+CGG 0.471128 3.2:-88390360 None:intergenic
GCTCTCCTCCCGCCGGCGAC+CGG 0.471790 3.2:-88390363 None:intergenic
TGGGCACTCATTATGGATGC+TGG 0.472875 3.2:+88394014 MS.gene40712:CDS
AGCTAGTAACGGGTCCTCAT+TGG 0.474983 3.2:+88394273 MS.gene40712:CDS
ATCTAGGATGTCTACTGAAA+TGG 0.475531 3.2:+88391732 MS.gene40712:intron
CGAGGTCGGGTACGCAACTC+AGG 0.476552 3.2:-88390312 None:intergenic
GATAACGCGCCGCCGGTCGC+CGG 0.478774 3.2:+88390351 MS.gene40712:CDS
TCATTGGTTGTAATGTCAAA+AGG 0.480800 3.2:+88394289 MS.gene40712:CDS
AGCTTGGGAAGGGAGGATTT+GGG 0.483807 3.2:+88390905 MS.gene40712:CDS
CTACATATTCTACAAACTGC+CGG 0.484853 3.2:-88393465 None:intergenic
AACTAATAGATGCGATATAG+AGG 0.485124 3.2:-88394983 None:intergenic
ATTGTAAAAGGAAATGAAGA+TGG 0.488040 3.2:+88393954 MS.gene40712:CDS
GGAAGACAAGCGTGTAAGCA+AGG 0.490386 3.2:-88393217 None:intergenic
ATAGATTAGATAGGAAGCTT+GGG 0.491550 3.2:+88390890 MS.gene40712:CDS
CCGCACAGACCAGAAGGAAT+CGG 0.493586 3.2:+88390400 MS.gene40712:CDS
CTCTGTAAATCCAGCACCAC+GGG 0.494784 3.2:-88394578 None:intergenic
TTCATCATCATCCTCTTCCA+TGG 0.494964 3.2:-88393730 None:intergenic
GTGTTGCTGGCTGACCCATT+CGG 0.496471 3.2:-88393770 None:intergenic
TTAGATAGGAAGCTTGGGAA+GGG 0.503149 3.2:+88390895 MS.gene40712:CDS
CGTAGTGCCGATAAAGCTCC+GGG 0.503731 3.2:+88390594 MS.gene40712:CDS
GCTCCGGGAGCCGAAGAAGA+AGG 0.504739 3.2:+88390609 MS.gene40712:CDS
CCGTAGTGCCGATAAAGCTC+CGG 0.505206 3.2:+88390593 MS.gene40712:CDS
GGAAGGAGAGAATAAGAAGA+AGG 0.510183 3.2:+88390518 MS.gene40712:CDS
CCATAGCTGGAGCTAGTAAC+GGG 0.513636 3.2:+88394263 MS.gene40712:CDS
ATTAGATAGGAAGCTTGGGA+AGG 0.514540 3.2:+88390894 MS.gene40712:CDS
TTGTCTTCCTTCTTCGTGGT+CGG 0.524778 3.2:+88393231 MS.gene40712:CDS
GCTATGGATGAGTACGATAG+TGG 0.525051 3.2:+88390567 MS.gene40712:CDS
CTTCGATGAATACCTTCACT+AGG 0.528484 3.2:-88394720 None:intergenic
TTCTCATCAGGGGTTCCCGA+GGG 0.529311 3.2:-88392860 None:intergenic
GGATTTGGGCAAGTCTATGT+TGG 0.531558 3.2:+88390919 MS.gene40712:CDS
GAATACCTTCACTAGGGTAC+AGG 0.532543 3.2:-88394713 None:intergenic
CCAAAGAAGAAGGTCCGAAT+GGG 0.533192 3.2:+88393756 MS.gene40712:CDS
TAATTACAGATTCAAGTTGG+TGG 0.534253 3.2:+88390856 MS.gene40712:intron
AGGACGATTGACCATGGAAG+AGG 0.534909 3.2:+88393719 MS.gene40712:CDS
ATTACGGACCTCCACATGAA+TGG 0.537264 3.2:+88391294 MS.gene40712:CDS
TCTTAATTACAGATTCAAGT+TGG 0.538540 3.2:+88390853 MS.gene40712:intron
ACAAACTGCCGGAAAGGTGC+AGG 0.538874 3.2:-88393454 None:intergenic
TATGCTTGGCTCTAGTCTAT+GGG 0.539645 3.2:+88391587 MS.gene40712:CDS
AGCTGGTTCTGGTGCCGTTG+AGG 0.543472 3.2:+88390954 MS.gene40712:CDS
GGTTTCTAGAGAGGAAGCTA+TGG 0.545782 3.2:+88390551 MS.gene40712:CDS
GAGACGGTTTATGCGAGGTC+GGG 0.546267 3.2:-88390325 None:intergenic
CGGACCTCCACATGAATGGC+AGG 0.546511 3.2:+88391298 MS.gene40712:CDS
TGGTGCTGGATTTACAGAGC+AGG 0.546908 3.2:+88394582 MS.gene40712:CDS
GAGAGATTGAAAGAAGAGGA+AGG 0.548043 3.2:+88390501 MS.gene40712:CDS
GGCCACTGCTGGCACTAGAT+GGG 0.549197 3.2:+88394543 MS.gene40712:CDS
AGAGAATAAGAAGAAGGCAG+TGG 0.549582 3.2:+88390524 MS.gene40712:CDS
AAGGTAACCGACCACGAAGA+AGG 0.552994 3.2:-88393238 None:intergenic
GTGAAGGTATTCATCGAAGG+TGG 0.556433 3.2:+88394724 MS.gene40712:CDS
TTTCTCATCAGGGGTTCCCG+AGG 0.557461 3.2:-88392861 None:intergenic
CTCCGGGAGCCGAAGAAGAA+GGG 0.558776 3.2:+88390610 MS.gene40712:CDS
TGAGCACCCTCGGTATTTAG+GGG 0.558929 3.2:-88393574 None:intergenic
TGATGAACAACCAAAGAAGA+AGG 0.560213 3.2:+88393746 MS.gene40712:CDS
AGTGGTTAGGGTTTCTAGAG+AGG 0.560234 3.2:+88390542 MS.gene40712:CDS
AGGAATGGATTATGGAACAG+TGG 0.562856 3.2:+88394218 MS.gene40712:intron
CGTGGTCGGTTACCTTGGCA+AGG 0.564377 3.2:+88393245 MS.gene40712:CDS
AAATACCGAGGGTGCTCAGA+AGG 0.565005 3.2:+88393579 MS.gene40712:CDS
CACGAGTACATTACAAGGGA+CGG 0.566096 3.2:+88391453 MS.gene40712:CDS
AGTAGAGAGATTGAAAGAAG+AGG 0.566314 3.2:+88390497 MS.gene40712:CDS
GCTAGTGTGCATGCACATCT+TGG 0.567152 3.2:+88393161 MS.gene40712:CDS
AAGTAGCAGGAGAGATGACT+TGG 0.570146 3.2:+88393190 MS.gene40712:CDS
TAGAGAAGATGCATTGTAGA+GGG 0.572443 3.2:+88391788 MS.gene40712:CDS
CCACCGCCGCACAGACCAGA+AGG 0.573426 3.2:+88390394 MS.gene40712:CDS
ACCAAAGAAGAAGGTCCGAA+TGG 0.576715 3.2:+88393755 MS.gene40712:CDS
TATTCTACAAACTGCCGGAA+AGG 0.578047 3.2:-88393460 None:intergenic
GTTTCTTGAGTTTCATCAGG+TGG 0.578812 3.2:-88394825 None:intergenic
ACACAAAGCTTCGGGTGAAG+TGG 0.580070 3.2:-88393422 None:intergenic
ACACAGGTCATGGATATGCT+TGG 0.581027 3.2:+88391573 MS.gene40712:intron
GCCATAGCTGGAGCTAGTAA+CGG 0.586802 3.2:+88394262 MS.gene40712:CDS
GAACAAACCTAAATACATCT+GGG 0.586854 3.2:-88393042 None:intergenic
TGTTCCACGAGTACATTACA+AGG 0.586861 3.2:+88391448 MS.gene40712:CDS
GGAATGGATTATGGAACAGT+GGG 0.588580 3.2:+88394219 MS.gene40712:intron
GTCTATGTTGGCCGACGCGT+AGG 0.589738 3.2:+88390931 MS.gene40712:CDS
TACAACTCCACTTCCTGAGA+AGG 0.591492 3.2:+88390635 MS.gene40712:CDS
GTGTTGGGAAAGCCGCTCAT+CGG 0.591532 3.2:-88393931 None:intergenic
ATCTTGGTAGAACAAGTAGC+AGG 0.592624 3.2:+88393177 MS.gene40712:CDS
TTAGAGAAGATGCATTGTAG+AGG 0.593386 3.2:+88391787 MS.gene40712:CDS
TGAGACGGTTTATGCGAGGT+CGG 0.596794 3.2:-88390326 None:intergenic
AGCACATTAGGTGGTAGTCA+TGG 0.600563 3.2:+88391425 MS.gene40712:intron
TCTCACTGATAACGCGCCGC+CGG 0.600651 3.2:+88390344 MS.gene40712:CDS
AGCGACGGCTCTCCTCCCGC+CGG 0.600658 3.2:-88390370 None:intergenic
ATAACCTGATATCCTTGCCA+AGG 0.602758 3.2:-88393257 None:intergenic
GTTGATCATAATCAACATGA+AGG 0.605161 3.2:-88393018 None:intergenic
GATTTCCTGTACCCTAGTGA+AGG 0.606757 3.2:+88394708 MS.gene40712:CDS
CACAGACCAGAAGGAATCGG+AGG 0.609955 3.2:+88390403 MS.gene40712:CDS
TGAAGGTATTCATCGAAGGT+GGG 0.610628 3.2:+88394725 MS.gene40712:CDS
CTCGTAGACCAATGAAACAA+AGG 0.611155 3.2:+88393814 MS.gene40712:CDS
TTGTAAACCTGCCATTCATG+TGG 0.611605 3.2:-88391305 None:intergenic
TAGGATGTCTACTGAAATGG+TGG 0.612266 3.2:+88391735 MS.gene40712:intron
TTGAGCATAGAAACAGCAAA+GGG 0.612579 3.2:+88391267 MS.gene40712:CDS
CCCGTTACTAGCTCCAGCTA+TGG 0.614186 3.2:-88394263 None:intergenic
TTTGAGCATAGAAACAGCAA+AGG 0.615974 3.2:+88391266 MS.gene40712:CDS
AAGTACCTTCTGAGCACCCT+CGG 0.619914 3.2:-88393584 None:intergenic
AAAGAGAGGACGATTGACCA+TGG 0.622958 3.2:+88393713 MS.gene40712:CDS
ATTCCTTCTGGTCTGTGCGG+CGG 0.623393 3.2:-88390397 None:intergenic
TTCGATGAATACCTTCACTA+GGG 0.624580 3.2:-88394719 None:intergenic
CGTCCCTTGTAATGTACTCG+TGG 0.624983 3.2:-88391452 None:intergenic
GGTGGCATGTATTGCAATCG+AGG 0.627258 3.2:+88391753 MS.gene40712:CDS
CCGGAGCTTTATCGGCACTA+CGG 0.627559 3.2:-88390593 None:intergenic
TAAACCTGCCATTCATGTGG+AGG 0.628206 3.2:-88391302 None:intergenic
GTACATTACAAGGGACGGCA+AGG 0.629460 3.2:+88391458 MS.gene40712:CDS
GTGAAGCTTATATGTCAGGT+TGG 0.629643 3.2:+88393687 MS.gene40712:intron
ATTACAATGTGGCCGATGAG+CGG 0.631315 3.2:+88393919 MS.gene40712:CDS
TGCCCATCTAGTGCCAGCAG+TGG 0.632198 3.2:-88394545 None:intergenic
GCGGCGCGTTATCAGTGAGA+CGG 0.633560 3.2:-88390341 None:intergenic
TGTTGTTGCAGATATGTGCA+TGG 0.634497 3.2:+88392806 MS.gene40712:intron
GAAGACAAGCGTGTAAGCAA+GGG 0.638778 3.2:-88393216 None:intergenic
TTGCAGCAGTTGCAGTAATG+CGG 0.640610 3.2:-88394758 None:intergenic
CTAGTGAAGGTATTCATCGA+AGG 0.644295 3.2:+88394721 MS.gene40712:CDS
TGGGCAATTGTTATGTCCCG+TGG 0.648130 3.2:+88394562 MS.gene40712:CDS
TACTAGGAAAATCAGACGTG+CGG 0.651938 3.2:-88394851 None:intergenic
TGGTTTATTTATTAGCAGTG+TGG 0.653080 3.2:+88393974 MS.gene40712:CDS
AAACACCGTACATACCTCAA+CGG 0.667251 3.2:-88390968 None:intergenic
TGTCAGGTTGGACAAAAGAG+AGG 0.668670 3.2:+88393699 MS.gene40712:CDS
ATGGATGAGTACGATAGTGG+TGG 0.670453 3.2:+88390570 MS.gene40712:CDS
CAGAACCAGCTCCTACGCGT+CGG 0.671406 3.2:-88390942 None:intergenic
GCTCTGTAAATCCAGCACCA+CGG 0.673158 3.2:-88394579 None:intergenic
CATTAGGCCCCTAAATACCG+AGG 0.680909 3.2:+88393567 MS.gene40712:CDS
TCAGTGAGACGGTTTATGCG+AGG 0.681265 3.2:-88390330 None:intergenic
ATTAGGCCCCTAAATACCGA+GGG 0.697940 3.2:+88393568 MS.gene40712:CDS
TGGGTCAGCCAGCAACACAG+TGG 0.714696 3.2:+88393775 MS.gene40712:CDS
GCGTAGGTATCATTACAATG+TGG 0.721199 3.2:+88393908 MS.gene40712:intron
GTTCCACGAGTACATTACAA+GGG 0.736863 3.2:+88391449 MS.gene40712:CDS
CCGATTCCTTCTGGTCTGTG+CGG 0.742167 3.2:-88390400 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTTATAAAATGTA+AGG + chr3.2:88391092-88391111 MS.gene40712:intron 10.0%
!! AAAAACTTTATAAAATGTAA+GGG + chr3.2:88391093-88391112 MS.gene40712:intron 10.0%
!! ATAATAAATATAATATAACC+AGG - chr3.2:88391827-88391846 None:intergenic 10.0%
!! TTATTTATGCAAAAATAAAT+CGG + chr3.2:88392037-88392056 MS.gene40712:intron 10.0%
!!! AAGTTTTTTAATAAAGTAAT+GGG + chr3.2:88391509-88391528 MS.gene40712:intron 10.0%
!!! TAAGTTTTTTAATAAAGTAA+TGG + chr3.2:88391508-88391527 MS.gene40712:intron 10.0%
!!! TGAATTTTTTAATTTTGTAA+GGG + chr3.2:88391043-88391062 MS.gene40712:intron 10.0%
!! ATCTATTATATTACTAACAT+TGG - chr3.2:88392700-88392719 None:intergenic 15.0%
!! TATTTAAATCAATGTATGTA+TGG + chr3.2:88393087-88393106 MS.gene40712:intron 15.0%
!!! AGTTTTTTAATAAAGTAATG+GGG + chr3.2:88391510-88391529 MS.gene40712:intron 15.0%
!!! CTGAATTTTTTAATTTTGTA+AGG + chr3.2:88391042-88391061 MS.gene40712:intron 15.0%
!!! TACATACATTGATTTAAATA+AGG - chr3.2:88393087-88393106 None:intergenic 15.0%
!!! TTGTTACATAATATTTTAGT+TGG + chr3.2:88391066-88391085 MS.gene40712:intron 15.0%
!! AAAATATAGAAAGTCAAAAC+TGG - chr3.2:88393887-88393906 None:intergenic 20.0%
!! AAATATAGAAAGTCAAAACT+GGG - chr3.2:88393886-88393905 None:intergenic 20.0%
!! AAGAACAAAAACAAATTTGA+GGG - chr3.2:88392607-88392626 None:intergenic 20.0%
!! ATTTAATTGAGATACAGTAA+TGG - chr3.2:88392404-88392423 None:intergenic 20.0%
!! TACATGTGTTATATCATTTA+AGG + chr3.2:88393622-88393641 MS.gene40712:intron 20.0%
!! TCTTGATGCATTATATATTT+AGG + chr3.2:88394324-88394343 MS.gene40712:intron 20.0%
!! TGATTAAATAACATTGTTGT+GGG + chr3.2:88391161-88391180 MS.gene40712:intron 20.0%
!! TTCCTATCTAATCTATATAA+TGG - chr3.2:88390886-88390905 None:intergenic 20.0%
!!! AGTTTTGACTTTCTATATTT+TGG + chr3.2:88393886-88393905 MS.gene40712:intron 20.0%
!!! GATATGTATTTTGCATAATT+TGG - chr3.2:88393514-88393533 None:intergenic 20.0%
!!! GTTTTTTAATAAAGTAATGG+GGG + chr3.2:88391511-88391530 MS.gene40712:intron 20.0%
!!! TATTTGATATATTTTTCTGC+AGG + chr3.2:88394944-88394963 MS.gene40712:intron 20.0%
!!! TTATGAAATTGTTTGTTACA+GGG + chr3.2:88393361-88393380 MS.gene40712:intron 20.0%
!!! TTTTACTAAATTAAGTGTTG+TGG + chr3.2:88392130-88392149 MS.gene40712:intron 20.0%
! ACAATGAATACATGAAAATC+AGG - chr3.2:88394901-88394920 None:intergenic 25.0%
! ATATCGCATCTATTAGTTAT+GGG + chr3.2:88394988-88395007 MS.gene40712:CDS 25.0%
! ATCATTCTGTGATTATGATA+GGG + chr3.2:88392430-88392449 MS.gene40712:intron 25.0%
! ATTGTAAAAGGAAATGAAGA+TGG + chr3.2:88393954-88393973 MS.gene40712:CDS 25.0%
! CTCCATTATATAGATTAGAT+AGG + chr3.2:88390881-88390900 MS.gene40712:CDS 25.0%
! GAAGAACAAAAACAAATTTG+AGG - chr3.2:88392608-88392627 None:intergenic 25.0%
! GATGCATTATATATTTAGGA+TGG + chr3.2:88394328-88394347 MS.gene40712:intron 25.0%
! GATTCTGTATATCATATTCT+TGG + chr3.2:88393119-88393138 MS.gene40712:intron 25.0%
! GTGATTAAATAACATTGTTG+TGG + chr3.2:88391160-88391179 MS.gene40712:intron 25.0%
! TATATCGCATCTATTAGTTA+TGG + chr3.2:88394987-88395006 MS.gene40712:CDS 25.0%
! TATCATTCTGTGATTATGAT+AGG + chr3.2:88392429-88392448 MS.gene40712:intron 25.0%
! TATGCAAAAATAAATCGGTT+GGG + chr3.2:88392042-88392061 MS.gene40712:intron 25.0%
! TCTTAATTACAGATTCAAGT+TGG + chr3.2:88390853-88390872 MS.gene40712:intron 25.0%
! TTAAGTGGATCAACAAAAAA+TGG + chr3.2:88394494-88394513 MS.gene40712:CDS 25.0%
! TTATGCAAAAATAAATCGGT+TGG + chr3.2:88392041-88392060 MS.gene40712:intron 25.0%
! TTTACTAACAGATTGTCTAT+GGG + chr3.2:88391863-88391882 MS.gene40712:intron 25.0%
!! AAATACATATCCCTTTTTGA+TGG + chr3.2:88393523-88393542 MS.gene40712:CDS 25.0%
!! ATATTTTTCTGCAGGAAAAA+TGG + chr3.2:88394952-88394971 MS.gene40712:intron 25.0%
!! ATTTCCTTTTACAATGTGTT+GGG - chr3.2:88393949-88393968 None:intergenic 25.0%
!! CATATCTTTTGTAAATGTCT+TGG + chr3.2:88391674-88391693 MS.gene40712:intron 25.0%
!! CTTATGAAATTGTTTGTTAC+AGG + chr3.2:88393360-88393379 MS.gene40712:intron 25.0%
!! GATAATTTTTGTCATGTGTT+AGG + chr3.2:88390808-88390827 MS.gene40712:intron 25.0%
!! TATTTTTCTGCAGGAAAAAT+GGG + chr3.2:88394953-88394972 MS.gene40712:intron 25.0%
!! TTTTTGTTGATCCACTTAAA+TGG - chr3.2:88394493-88394512 None:intergenic 25.0%
AAAAAATTCAGACACCCAAA+TGG - chr3.2:88391033-88391052 None:intergenic 30.0%
AAAATAAAAGCAGCTTGATC+AGG - chr3.2:88394786-88394805 None:intergenic 30.0%
AAATAAATGTTGCTCAACCT+CGG - chr3.2:88392023-88392042 None:intergenic 30.0%
AAATCATGAATCTGTTTCAC+AGG + chr3.2:88394198-88394217 MS.gene40712:intron 30.0%
AACACCCAAATGATAACATA+AGG - chr3.2:88391911-88391930 None:intergenic 30.0%
AACTAATAGATGCGATATAG+AGG - chr3.2:88394986-88395005 None:intergenic 30.0%
ACCTACAATTCCATCAAAAA+GGG - chr3.2:88393536-88393555 None:intergenic 30.0%
ACTCTATTGAAACAGAAAAG+AGG - chr3.2:88391341-88391360 None:intergenic 30.0%
AGAACAAACCTAAATACATC+TGG - chr3.2:88393046-88393065 None:intergenic 30.0%
AGATTTAAACACAACACTAC+TGG - chr3.2:88394389-88394408 None:intergenic 30.0%
ATAAAAGTCATAGATGCCTT+TGG - chr3.2:88391201-88391220 None:intergenic 30.0%
ATAGATTAGATAGGAAGCTT+GGG + chr3.2:88390890-88390909 MS.gene40712:CDS 30.0%
ATAGGATTGTTGCATGTATT+GGG - chr3.2:88394452-88394471 None:intergenic 30.0%
ATTTACTAATTGACCATTGC+AGG - chr3.2:88392636-88392655 None:intergenic 30.0%
CTAGATCCAAAAAAGAACTA+AGG - chr3.2:88391718-88391737 None:intergenic 30.0%
CTCTATTGAAACAGAAAAGA+GGG - chr3.2:88391340-88391359 None:intergenic 30.0%
CTTTACTAACAGATTGTCTA+TGG + chr3.2:88391862-88391881 MS.gene40712:intron 30.0%
GAACAAACCTAAATACATCT+GGG - chr3.2:88393045-88393064 None:intergenic 30.0%
GGAAAAAATTTGTACACCAA+AGG + chr3.2:88391182-88391201 MS.gene40712:intron 30.0%
GTTGATCATAATCAACATGA+AGG - chr3.2:88393021-88393040 None:intergenic 30.0%
TATAGATTAGATAGGAAGCT+TGG + chr3.2:88390889-88390908 MS.gene40712:CDS 30.0%
TATAGGATTGTTGCATGTAT+TGG - chr3.2:88394453-88394472 None:intergenic 30.0%
TGGTTTATTTATTAGCAGTG+TGG + chr3.2:88393974-88393993 MS.gene40712:CDS 30.0%
TGTAACATAATGTTACACAC+AGG + chr3.2:88391557-88391576 MS.gene40712:intron 30.0%
TGTATATCATATTCTTGGCA+GGG + chr3.2:88393124-88393143 MS.gene40712:intron 30.0%
TTAATGCTACCTGCAATTAT+TGG - chr3.2:88391244-88391263 None:intergenic 30.0%
TTACTAACAGATTGTCTATG+GGG + chr3.2:88391864-88391883 MS.gene40712:intron 30.0%
TTACTAACATTGGTATTGCA+TGG - chr3.2:88392690-88392709 None:intergenic 30.0%
TTGTTACAGGGAGAAAATAA+AGG + chr3.2:88393373-88393392 MS.gene40712:intron 30.0%
TTTACCTTAACATGAGTACT+AGG - chr3.2:88394870-88394889 None:intergenic 30.0%
! AAATTCTTCTGATTTAGCTC+TGG + chr3.2:88392080-88392099 MS.gene40712:intron 30.0%
! ACTTTTTATAGCACATTAGG+TGG + chr3.2:88391416-88391435 MS.gene40712:intron 30.0%
! AGGTTTCTTTTTATCCAGTA+GGG + chr3.2:88392183-88392202 MS.gene40712:intron 30.0%
! ATACTCTTAAAGCCCTTTTA+TGG + chr3.2:88393655-88393674 MS.gene40712:intron 30.0%
! ATTGATACATGTTGCCATTT+GGG + chr3.2:88391016-88391035 MS.gene40712:intron 30.0%
! CACAATGTTTTCGATTTTCT+CGG - chr3.2:88390457-88390476 None:intergenic 30.0%
! CATTTCCTTTTACAATGTGT+TGG - chr3.2:88393950-88393969 None:intergenic 30.0%
! TACTAAATTAAGTGTTGTGG+AGG + chr3.2:88392133-88392152 MS.gene40712:intron 30.0%
! TACTCTTAAAGCCCTTTTAT+GGG + chr3.2:88393656-88393675 MS.gene40712:intron 30.0%
! TCTTTTCTGTTTCAATAGAG+TGG + chr3.2:88391340-88391359 MS.gene40712:intron 30.0%
! TGATGAGAAAAAGTTGTTTC+TGG + chr3.2:88392874-88392893 MS.gene40712:CDS 30.0%
! TTTTCCTAGTACTCATGTTA+AGG + chr3.2:88394863-88394882 MS.gene40712:CDS 30.0%
!! AAACAACTTTTTCTCATCAG+GGG - chr3.2:88392873-88392892 None:intergenic 30.0%
!! AGAAACAACTTTTTCTCATC+AGG - chr3.2:88392875-88392894 None:intergenic 30.0%
!! ATAAAAGGGCTTTAAGAGTA+TGG - chr3.2:88393656-88393675 None:intergenic 30.0%
!! ATTGACAATGAAAGCATCAA+AGG - chr3.2:88392936-88392955 None:intergenic 30.0%
!! GAAACAACTTTTTCTCATCA+GGG - chr3.2:88392874-88392893 None:intergenic 30.0%
!! TAATTACAGATTCAAGTTGG+TGG + chr3.2:88390856-88390875 MS.gene40712:intron 30.0%
!! TTGACAATGAAAGCATCAAA+GGG - chr3.2:88392935-88392954 None:intergenic 30.0%
!!! CTCACTTTTTATAGCACATT+AGG + chr3.2:88391413-88391432 MS.gene40712:intron 30.0%
!!! CTTAGTTCTTTTTTGGATCT+AGG + chr3.2:88391716-88391735 MS.gene40712:intron 30.0%
!!! GTCTAACCTTAGTTCTTTTT+TGG + chr3.2:88391709-88391728 MS.gene40712:intron 30.0%
!!! TAGTTTTTTTTTTTACCCCG+AGG + chr3.2:88392003-88392022 MS.gene40712:intron 30.0%
AAGTCCCAAATCAAGTAGTA+TGG + chr3.2:88392475-88392494 MS.gene40712:intron 35.0%
AATAAATGTTGCTCAACCTC+GGG - chr3.2:88392022-88392041 None:intergenic 35.0%
ACAAAAGCAACACAAAGCTT+CGG - chr3.2:88393434-88393453 None:intergenic 35.0%
AGTAGAGAGATTGAAAGAAG+AGG + chr3.2:88390497-88390516 MS.gene40712:CDS 35.0%
AGTGGATCAACAAAAAATGG+AGG + chr3.2:88394497-88394516 MS.gene40712:CDS 35.0%
ATAATGTTACACACAGGTCA+TGG + chr3.2:88391563-88391582 MS.gene40712:intron 35.0%
ATCAACAAAAAATGGAGGGA+AGG + chr3.2:88394502-88394521 MS.gene40712:CDS 35.0%
ATCCTAAAAGCTAGCTATCA+AGG - chr3.2:88392538-88392557 None:intergenic 35.0%
ATGAATCTGTTTCACAGGAA+TGG + chr3.2:88394203-88394222 MS.gene40712:intron 35.0%
ATGGCAACATGTATCAATCA+CGG - chr3.2:88391014-88391033 None:intergenic 35.0%
ATGGGAGAACAGTTTCATAA+AGG + chr3.2:88395006-88395025 MS.gene40712:CDS 35.0%
CAAAAACAAATTTGAGGGCA+TGG - chr3.2:88392602-88392621 None:intergenic 35.0%
CACAACACAAACCCATAAAA+GGG - chr3.2:88393670-88393689 None:intergenic 35.0%
CTACATATTCTACAAACTGC+CGG - chr3.2:88393468-88393487 None:intergenic 35.0%
CTCGCCTTATGTTATCATTT+GGG + chr3.2:88391904-88391923 MS.gene40712:intron 35.0%
CTGTATATCATATTCTTGGC+AGG + chr3.2:88393123-88393142 MS.gene40712:intron 35.0%
CTTCACTATGAACATTTCTG+AGG - chr3.2:88390672-88390691 None:intergenic 35.0%
CTTTCCCAACACATTGTAAA+AGG + chr3.2:88393942-88393961 MS.gene40712:CDS 35.0%
GAACTAATGAGAAAACTGCA+GGG - chr3.2:88392265-88392284 None:intergenic 35.0%
GACCTACAATTCCATCAAAA+AGG - chr3.2:88393537-88393556 None:intergenic 35.0%
GATATTGCTCCAATAATTGC+AGG + chr3.2:88391232-88391251 MS.gene40712:intron 35.0%
GATTGATACATGTTGCCATT+TGG + chr3.2:88391015-88391034 MS.gene40712:intron 35.0%
GTATATCATATTCTTGGCAG+GGG + chr3.2:88393125-88393144 MS.gene40712:intron 35.0%
GTGGATCAACAAAAAATGGA+GGG + chr3.2:88394498-88394517 MS.gene40712:CDS 35.0%
TAGAGAAGATGCATTGTAGA+GGG + chr3.2:88391788-88391807 MS.gene40712:CDS 35.0%
TCACAACACAAACCCATAAA+AGG - chr3.2:88393671-88393690 None:intergenic 35.0%
TCTCGCCTTATGTTATCATT+TGG + chr3.2:88391903-88391922 MS.gene40712:intron 35.0%
TCTTGTCTGCAAGAAAAAGA+TGG + chr3.2:88393399-88393418 MS.gene40712:CDS 35.0%
TGAACTAATGAGAAAACTGC+AGG - chr3.2:88392266-88392285 None:intergenic 35.0%
TGATGAACAACCAAAGAAGA+AGG + chr3.2:88393746-88393765 MS.gene40712:CDS 35.0%
TGTGATTATGATAGGGACTT+GGG + chr3.2:88392437-88392456 MS.gene40712:intron 35.0%
TGTGCTATAAAAAGTGAGCA+TGG - chr3.2:88391411-88391430 None:intergenic 35.0%
TGTTGTGAAGCTTATATGTC+AGG + chr3.2:88393683-88393702 MS.gene40712:intron 35.0%
TTAGAGAAGATGCATTGTAG+AGG + chr3.2:88391787-88391806 MS.gene40712:CDS 35.0%
TTCCCCATGAGGTAAAAAAA+CGG - chr3.2:88391934-88391953 None:intergenic 35.0%
TTCGATGAATACCTTCACTA+GGG - chr3.2:88394722-88394741 None:intergenic 35.0%
TTGAGCATAGAAACAGCAAA+GGG + chr3.2:88391267-88391286 MS.gene40712:CDS 35.0%
TTTGAGCATAGAAACAGCAA+AGG + chr3.2:88391266-88391285 MS.gene40712:CDS 35.0%
! ATCTAGGATGTCTACTGAAA+TGG + chr3.2:88391732-88391751 MS.gene40712:intron 35.0%
! GAGGTTTCTTTTTATCCAGT+AGG + chr3.2:88392182-88392201 MS.gene40712:intron 35.0%
! GCTCAAAACCTTTGTTTCAT+TGG - chr3.2:88393825-88393844 None:intergenic 35.0%
! TCCCTTTTTGATGGAATTGT+AGG + chr3.2:88393532-88393551 MS.gene40712:CDS 35.0%
! TGCAGTTTTCTCATTAGTTC+AGG + chr3.2:88392265-88392284 MS.gene40712:intron 35.0%
!! AAACGAGTCACTGACTTTAT+AGG - chr3.2:88394470-88394489 None:intergenic 35.0%
!! AAGTTGTTTCTGGTTGATCT+TGG + chr3.2:88392884-88392903 MS.gene40712:CDS 35.0%
!! TGTTTCACAGGAATGGATTA+TGG + chr3.2:88394210-88394229 MS.gene40712:intron 35.0%
!! TTTCTGGTTGATCTTGGATT+AGG + chr3.2:88392890-88392909 MS.gene40712:CDS 35.0%
!!! AGGATTTTTTGTCACTGCTA+TGG + chr3.2:88394522-88394541 MS.gene40712:CDS 35.0%
!!! GACTTTCTATATTTTGGCGT+AGG + chr3.2:88393892-88393911 MS.gene40712:intron 35.0%
!!! GGGTGAGTATTTTAGTAGAT+TGG + chr3.2:88392504-88392523 MS.gene40712:intron 35.0%
!!! GTTCCGTTTTTTTACCTCAT+GGG + chr3.2:88391928-88391947 MS.gene40712:intron 35.0%
!!! TGTTCCGTTTTTTTACCTCA+TGG + chr3.2:88391927-88391946 MS.gene40712:intron 35.0%
!!! TTCCGTTTTTTTACCTCATG+GGG + chr3.2:88391929-88391948 MS.gene40712:intron 35.0%
AAAATCACCTTCTCAGGAAG+TGG - chr3.2:88390645-88390664 None:intergenic 40.0%
AAACACCGTACATACCTCAA+CGG - chr3.2:88390971-88390990 None:intergenic 40.0%
AAGCCTGAAAACTTCTTGCT+TGG + chr3.2:88392836-88392855 MS.gene40712:CDS 40.0%
AATCAAGTAGTATGGCGTGT+TGG + chr3.2:88392483-88392502 MS.gene40712:intron 40.0%
ACACGCCATACTACTTGATT+TGG - chr3.2:88392483-88392502 None:intergenic 40.0%
ACCAACCTTGTGAAGAAAAC+TGG - chr3.2:88394075-88394094 None:intergenic 40.0%
AGAGAATAAGAAGAAGGCAG+TGG + chr3.2:88390524-88390543 MS.gene40712:CDS 40.0%
AGCGTTTCTTGAGTTTCATC+AGG - chr3.2:88394831-88394850 None:intergenic 40.0%
AGTTGTACTCCCTTCTTCTT+CGG - chr3.2:88390622-88390641 None:intergenic 40.0%
ATAAATGTTGCTCAACCTCG+GGG - chr3.2:88392021-88392040 None:intergenic 40.0%
ATAACCTGATATCCTTGCCA+AGG - chr3.2:88393260-88393279 None:intergenic 40.0%
ATAAGAAGAAGGCAGTGGTT+AGG + chr3.2:88390529-88390548 MS.gene40712:CDS 40.0%
ATATCTGCAACAACAACAGC+AGG - chr3.2:88392801-88392820 None:intergenic 40.0%
ATCAACGCCCAGATGTATTT+AGG + chr3.2:88393035-88393054 MS.gene40712:CDS 40.0%
ATCAAGTAGTATGGCGTGTT+GGG + chr3.2:88392484-88392503 MS.gene40712:intron 40.0%
ATCTTGGTAGAACAAGTAGC+AGG + chr3.2:88393177-88393196 MS.gene40712:CDS 40.0%
ATTAGATAGGAAGCTTGGGA+AGG + chr3.2:88390894-88390913 MS.gene40712:CDS 40.0%
CAAAAGCAACACAAAGCTTC+GGG - chr3.2:88393433-88393452 None:intergenic 40.0%
CACGCCATACTACTTGATTT+GGG - chr3.2:88392482-88392501 None:intergenic 40.0%
CATATCTATTCCCGTTGCTT+CGG - chr3.2:88391140-88391159 None:intergenic 40.0%
CTAAAAGCTAGCTATCAAGG+AGG - chr3.2:88392535-88392554 None:intergenic 40.0%
CTCGTAGACCAATGAAACAA+AGG + chr3.2:88393814-88393833 MS.gene40712:CDS 40.0%
CTGTGATTATGATAGGGACT+TGG + chr3.2:88392436-88392455 MS.gene40712:intron 40.0%
CTTCGATGAATACCTTCACT+AGG - chr3.2:88394723-88394742 None:intergenic 40.0%
GAGAGATTGAAAGAAGAGGA+AGG + chr3.2:88390501-88390520 MS.gene40712:CDS 40.0%
GATAGGGACTTGGGTATTAT+GGG + chr3.2:88392446-88392465 MS.gene40712:intron 40.0%
GCAAGGTGACTACTACATTA+TGG + chr3.2:88391475-88391494 MS.gene40712:CDS 40.0%
GCGTAGGTATCATTACAATG+TGG + chr3.2:88393908-88393927 MS.gene40712:intron 40.0%
GGAAGGAGAGAATAAGAAGA+AGG + chr3.2:88390518-88390537 MS.gene40712:CDS 40.0%
GGAATCAAAATCACCTTCTC+AGG - chr3.2:88390651-88390670 None:intergenic 40.0%
GTGAAGCTTATATGTCAGGT+TGG + chr3.2:88393687-88393706 MS.gene40712:intron 40.0%
GTGACTCGTTTCCATTTAAG+TGG + chr3.2:88394479-88394498 MS.gene40712:CDS 40.0%
GTTCCACGAGTACATTACAA+GGG + chr3.2:88391449-88391468 MS.gene40712:CDS 40.0%
GTTGCTTCGGCACAAAATAA+CGG - chr3.2:88391127-88391146 None:intergenic 40.0%
GTTTCTTGAGTTTCATCAGG+TGG - chr3.2:88394828-88394847 None:intergenic 40.0%
TAAGAAGAAGGCAGTGGTTA+GGG + chr3.2:88390530-88390549 MS.gene40712:CDS 40.0%
TACTAGGAAAATCAGACGTG+CGG - chr3.2:88394854-88394873 None:intergenic 40.0%
TAGGATGTCTACTGAAATGG+TGG + chr3.2:88391735-88391754 MS.gene40712:intron 40.0%
TAGGTCCAAATCCTGACATT+AGG + chr3.2:88393551-88393570 MS.gene40712:CDS 40.0%
TAGTCTTTGGGCACTCATTA+TGG + chr3.2:88394007-88394026 MS.gene40712:CDS 40.0%
TATTACATCAGTGCCATAGC+TGG + chr3.2:88394250-88394269 MS.gene40712:CDS 40.0%
TATTCTACAAACTGCCGGAA+AGG - chr3.2:88393463-88393482 None:intergenic 40.0%
TCTAGTTGAGTCAGACGTTA+TGG + chr3.2:88390760-88390779 MS.gene40712:intron 40.0%
TGATAGGGACTTGGGTATTA+TGG + chr3.2:88392445-88392464 MS.gene40712:intron 40.0%
TGTTCCACGAGTACATTACA+AGG + chr3.2:88391448-88391467 MS.gene40712:CDS 40.0%
TGTTGTTGCAGATATGTGCA+TGG + chr3.2:88392806-88392825 MS.gene40712:intron 40.0%
TTAGATAGGAAGCTTGGGAA+GGG + chr3.2:88390895-88390914 MS.gene40712:CDS 40.0%
TTCATCATCATCCTCTTCCA+TGG - chr3.2:88393733-88393752 None:intergenic 40.0%
TTCTCTCTAAACTCGATGCT+AGG + chr3.2:88394674-88394693 MS.gene40712:intron 40.0%
TTGTAAACCTGCCATTCATG+TGG - chr3.2:88391308-88391327 None:intergenic 40.0%
! AACAGCAAAGGGTGCAATTA+CGG + chr3.2:88391278-88391297 MS.gene40712:CDS 40.0%
! AATTAAGTGTTGTGGAGGAG+AGG + chr3.2:88392138-88392157 MS.gene40712:intron 40.0%
! ACTTTTCATGAGCACATCTC+AGG - chr3.2:88392353-88392372 None:intergenic 40.0%
! AGAGGTTTCTTGTTATCCAG+AGG + chr3.2:88392156-88392175 MS.gene40712:intron 40.0%
! AGGTTTCTTGTTATCCAGAG+GGG + chr3.2:88392158-88392177 MS.gene40712:intron 40.0%
! CATCAGGTGGTTTTCTTCTT+GGG - chr3.2:88394815-88394834 None:intergenic 40.0%
! CTCTTCCAGTTTTCTTCACA+AGG + chr3.2:88394067-88394086 MS.gene40712:CDS 40.0%
! GAGGTTTCTTGTTATCCAGA+GGG + chr3.2:88392157-88392176 MS.gene40712:intron 40.0%
! TCATCAGGTGGTTTTCTTCT+TGG - chr3.2:88394816-88394835 None:intergenic 40.0%
! TCCAGTTTTCTTCACAAGGT+TGG + chr3.2:88394071-88394090 MS.gene40712:intron 40.0%
! TCTTTTTATCCAGTAGGGTG+AGG + chr3.2:88392188-88392207 MS.gene40712:intron 40.0%
! TTTTCTACACAGCAACTCGT+TGG + chr3.2:88392978-88392997 MS.gene40712:intron 40.0%
!! AGGAATGGATTATGGAACAG+TGG + chr3.2:88394218-88394237 MS.gene40712:intron 40.0%
!! ATATGCTTGGCTCTAGTCTA+TGG + chr3.2:88391586-88391605 MS.gene40712:CDS 40.0%
!! CTAGTGAAGGTATTCATCGA+AGG + chr3.2:88394721-88394740 MS.gene40712:CDS 40.0%
!! GAAAGCATCAAAGGGTAACA+TGG - chr3.2:88392927-88392946 None:intergenic 40.0%
!! GGAATGGATTATGGAACAGT+GGG + chr3.2:88394219-88394238 MS.gene40712:intron 40.0%
!! GTTATTTTGTGCCGAAGCAA+CGG + chr3.2:88391126-88391145 MS.gene40712:intron 40.0%
!! TATGCTTGGCTCTAGTCTAT+GGG + chr3.2:88391587-88391606 MS.gene40712:CDS 40.0%
!! TGAAGGTATTCATCGAAGGT+GGG + chr3.2:88394725-88394744 MS.gene40712:CDS 40.0%
!! TTATTTTGTGCCGAAGCAAC+GGG + chr3.2:88391127-88391146 MS.gene40712:intron 40.0%
!!! CTCCTTGATAGCTAGCTTTT+AGG + chr3.2:88392533-88392552 MS.gene40712:intron 40.0%
AAAAAGAAACCTCACCCCTC+TGG - chr3.2:88392175-88392194 None:intergenic 45.0%
AAACTTCTTGCTTGGACCCT+CGG + chr3.2:88392844-88392863 MS.gene40712:CDS 45.0%
AAAGAGAGGACGATTGACCA+TGG + chr3.2:88393713-88393732 MS.gene40712:CDS 45.0%
AAGTAGCAGGAGAGATGACT+TGG + chr3.2:88393190-88393209 MS.gene40712:CDS 45.0%
ACACAGGTCATGGATATGCT+TGG + chr3.2:88391573-88391592 MS.gene40712:intron 45.0%
ACACTAATCCACTGTGTTGC+TGG - chr3.2:88393786-88393805 None:intergenic 45.0%
ACCAAAGAAGAAGGTCCGAA+TGG + chr3.2:88393755-88393774 MS.gene40712:CDS 45.0%
ACTAATTGACCATTGCAGGC+AGG - chr3.2:88392632-88392651 None:intergenic 45.0%
AGCACATTAGGTGGTAGTCA+TGG + chr3.2:88391425-88391444 MS.gene40712:intron 45.0%
ATTACAATGTGGCCGATGAG+CGG + chr3.2:88393919-88393938 MS.gene40712:CDS 45.0%
ATTACGGACCTCCACATGAA+TGG + chr3.2:88391294-88391313 MS.gene40712:CDS 45.0%
ATTAGGCCCCTAAATACCGA+GGG + chr3.2:88393568-88393587 MS.gene40712:CDS 45.0%
ATTGAACGTGTTTCCCCATG+AGG - chr3.2:88391945-88391964 None:intergenic 45.0%
CACGAGTACATTACAAGGGA+CGG + chr3.2:88391453-88391472 MS.gene40712:CDS 45.0%
CCAAAGAAGAAGGTCCGAAT+GGG + chr3.2:88393756-88393775 MS.gene40712:CDS 45.0%
CGAAGCAACGGGAATAGATA+TGG + chr3.2:88391138-88391157 MS.gene40712:intron 45.0%
CTAAACTCGATGCTAGGTTG+TGG + chr3.2:88394680-88394699 MS.gene40712:intron 45.0%
CTAATTGACCATTGCAGGCA+GGG - chr3.2:88392631-88392650 None:intergenic 45.0%
GAAGACAAGCGTGTAAGCAA+GGG - chr3.2:88393219-88393238 None:intergenic 45.0%
GAATACCTTCACTAGGGTAC+AGG - chr3.2:88394716-88394735 None:intergenic 45.0%
GACAAGTATCTGAGCACTTG+AGG - chr3.2:88392562-88392581 None:intergenic 45.0%
GATTTCCTGTACCCTAGTGA+AGG + chr3.2:88394708-88394727 MS.gene40712:CDS 45.0%
GCTATGGATGAGTACGATAG+TGG + chr3.2:88390567-88390586 MS.gene40712:CDS 45.0%
GCTCTAGTCTATGGGATGTT+TGG + chr3.2:88391595-88391614 MS.gene40712:CDS 45.0%
GGATTTGGGCAAGTCTATGT+TGG + chr3.2:88390919-88390938 MS.gene40712:CDS 45.0%
GGGGTTTCTATTGTCTCTGA+AGG + chr3.2:88391530-88391549 MS.gene40712:intron 45.0%
GGTGTTTATGTCTGCCATTG+TGG + chr3.2:88390984-88391003 MS.gene40712:intron 45.0%
GTATTTAGGGGCCTAATGTC+AGG - chr3.2:88393565-88393584 None:intergenic 45.0%
GTGAATAACGACGACGAAAC+AGG + chr3.2:88390474-88390493 MS.gene40712:CDS 45.0%
GTGATCTGCTGTTCCTTACA+GGG + chr3.2:88394425-88394444 MS.gene40712:intron 45.0%
GTTACCTTGGCAAGGATATC+AGG + chr3.2:88393253-88393272 MS.gene40712:CDS 45.0%
TAAACCTGCCATTCATGTGG+AGG - chr3.2:88391305-88391324 None:intergenic 45.0%
TAAGCTTGACACACTGATCC+TGG - chr3.2:88392229-88392248 None:intergenic 45.0%
TAATTGACCATTGCAGGCAG+GGG - chr3.2:88392630-88392649 None:intergenic 45.0%
TACAACTCCACTTCCTGAGA+AGG + chr3.2:88390635-88390654 MS.gene40712:CDS 45.0%
TGTGATCTGCTGTTCCTTAC+AGG + chr3.2:88394424-88394443 MS.gene40712:intron 45.0%
TTGCAGCAGTTGCAGTAATG+CGG - chr3.2:88394761-88394780 None:intergenic 45.0%
TTGTCTTCCTTCTTCGTGGT+CGG + chr3.2:88393231-88393250 MS.gene40712:CDS 45.0%
! AGTGGTTAGGGTTTCTAGAG+AGG + chr3.2:88390542-88390561 MS.gene40712:CDS 45.0%
! ATGGATGAGTACGATAGTGG+TGG + chr3.2:88390570-88390589 MS.gene40712:CDS 45.0%
! GGTCCAAGCAAGAAGTTTTC+AGG - chr3.2:88392842-88392861 None:intergenic 45.0%
! GGTTTCTAGAGAGGAAGCTA+TGG + chr3.2:88390551-88390570 MS.gene40712:CDS 45.0%
!! GGCTTCTTGTGCTAGTCTTT+GGG + chr3.2:88393995-88394014 MS.gene40712:CDS 45.0%
!! GTGAAGGTATTCATCGAAGG+TGG + chr3.2:88394724-88394743 MS.gene40712:CDS 45.0%
!! TGGCTTCTTGTGCTAGTCTT+TGG + chr3.2:88393994-88394013 MS.gene40712:CDS 45.0%
!! TGTCAGGTTGGACAAAAGAG+AGG + chr3.2:88393699-88393718 MS.gene40712:CDS 45.0%
!! TATATTTATTATTTATACAT+GGG + chr3.2:88391835-88391854 MS.gene40712:intron 5.0%
!! TTATATTTATTATTTATACA+TGG + chr3.2:88391834-88391853 MS.gene40712:intron 5.0%
AACTTCTTGCTTGGACCCTC+GGG + chr3.2:88392845-88392864 MS.gene40712:CDS 50.0%
AAGCTTGGGAAGGGAGGATT+TGG + chr3.2:88390904-88390923 MS.gene40712:CDS 50.0%
AAGGTAACCGACCACGAAGA+AGG - chr3.2:88393241-88393260 None:intergenic 50.0%
AAGTACCTTCTGAGCACCCT+CGG - chr3.2:88393587-88393606 None:intergenic 50.0%
ACACAAAGCTTCGGGTGAAG+TGG - chr3.2:88393425-88393444 None:intergenic 50.0%
ACGCTTGTCTTCCTTCTTCG+TGG + chr3.2:88393227-88393246 MS.gene40712:CDS 50.0%
AGCTTGGGAAGGGAGGATTT+GGG + chr3.2:88390905-88390924 MS.gene40712:CDS 50.0%
AGGACGATTGACCATGGAAG+AGG + chr3.2:88393719-88393738 MS.gene40712:CDS 50.0%
AGGGGCCTAATGTCAGGATT+TGG - chr3.2:88393559-88393578 None:intergenic 50.0%
ATTGTTATGTCCCGTGGTGC+TGG + chr3.2:88394568-88394587 MS.gene40712:CDS 50.0%
CATTAGGCCCCTAAATACCG+AGG + chr3.2:88393567-88393586 MS.gene40712:CDS 50.0%
CATTAGTTCAGGCTGAGAGC+AGG + chr3.2:88392276-88392295 MS.gene40712:intron 50.0%
CCATAGCTGGAGCTAGTAAC+GGG + chr3.2:88394263-88394282 MS.gene40712:CDS 50.0%
CCCATTCGGACCTTCTTCTT+TGG - chr3.2:88393759-88393778 None:intergenic 50.0%
CGTCCCTTGTAATGTACTCG+TGG - chr3.2:88391455-88391474 None:intergenic 50.0%
CGTTGGCGTGATAGTTCAAC+TGG + chr3.2:88392995-88393014 MS.gene40712:CDS 50.0%
CTCATTATGGATGCTGGCAC+TGG + chr3.2:88394020-88394039 MS.gene40712:CDS 50.0%
CTCTGTAAATCCAGCACCAC+GGG - chr3.2:88394581-88394600 None:intergenic 50.0%
CTGAGCACCCTCGGTATTTA+GGG - chr3.2:88393578-88393597 None:intergenic 50.0%
GCATGTATTGGGTCCCTGTA+AGG - chr3.2:88394441-88394460 None:intergenic 50.0%
GCCATAGCTGGAGCTAGTAA+CGG + chr3.2:88394262-88394281 MS.gene40712:CDS 50.0%
GCTAGTGTGCATGCACATCT+TGG + chr3.2:88393161-88393180 MS.gene40712:CDS 50.0%
GCTCTGTAAATCCAGCACCA+CGG - chr3.2:88394582-88394601 None:intergenic 50.0%
GGAAGACAAGCGTGTAAGCA+AGG - chr3.2:88393220-88393239 None:intergenic 50.0%
GGTGGCATGTATTGCAATCG+AGG + chr3.2:88391753-88391772 MS.gene40712:CDS 50.0%
GTACATTACAAGGGACGGCA+AGG + chr3.2:88391458-88391477 MS.gene40712:CDS 50.0%
TAGGGTGAGGTCCATGCTAA+GGG + chr3.2:88392201-88392220 MS.gene40712:intron 50.0%
TCAGTGAGACGGTTTATGCG+AGG - chr3.2:88390333-88390352 None:intergenic 50.0%
TCTGAGCACCCTCGGTATTT+AGG - chr3.2:88393579-88393598 None:intergenic 50.0%
TGAGACGGTTTATGCGAGGT+CGG - chr3.2:88390329-88390348 None:intergenic 50.0%
TGAGCACCCTCGGTATTTAG+GGG - chr3.2:88393577-88393596 None:intergenic 50.0%
TGATCCTGGTACCCTTAGCA+TGG - chr3.2:88392215-88392234 None:intergenic 50.0%
TGGGCAATTGTTATGTCCCG+TGG + chr3.2:88394562-88394581 MS.gene40712:CDS 50.0%
TGGGCACTCATTATGGATGC+TGG + chr3.2:88394014-88394033 MS.gene40712:CDS 50.0%
TTCTTCGTGGTCGGTTACCT+TGG + chr3.2:88393240-88393259 MS.gene40712:CDS 50.0%
! AACCCAAGTTCCACTTGCTG+TGG + chr3.2:88392303-88392322 MS.gene40712:intron 50.0%
! GAGGGTGAGACTCATTTTCC+TGG + chr3.2:88391806-88391825 MS.gene40712:intron 50.0%
! GCTTTTGTCCTGCACCTTTC+CGG + chr3.2:88393446-88393465 MS.gene40712:CDS 50.0%
! TCAATCACGGAGCACCACAA+TGG - chr3.2:88391001-88391020 None:intergenic 50.0%
! TCTTGTTATCCAGAGGGGTG+AGG + chr3.2:88392163-88392182 MS.gene40712:intron 50.0%
! TGGTGCTGGATTTACAGAGC+AGG + chr3.2:88394582-88394601 MS.gene40712:CDS 50.0%
!! AAATACCGAGGGTGCTCAGA+AGG + chr3.2:88393579-88393598 MS.gene40712:CDS 50.0%
!! AGCTAGTAACGGGTCCTCAT+TGG + chr3.2:88394273-88394292 MS.gene40712:CDS 50.0%
!! TGGTGCCGTTGAGGTATGTA+CGG + chr3.2:88390963-88390982 MS.gene40712:intron 50.0%
!! TTCCACTTGCTGTGGCCTAT+GGG + chr3.2:88392311-88392330 MS.gene40712:intron 50.0%
AGGCCACAGCAAGTGGAACT+TGG - chr3.2:88392309-88392328 None:intergenic 55.0%
ATTCCTTCTGGTCTGTGCGG+CGG - chr3.2:88390400-88390419 None:intergenic 55.0%
CACAGACCAGAAGGAATCGG+AGG + chr3.2:88390403-88390422 MS.gene40712:CDS 55.0%
CCCGTTACTAGCTCCAGCTA+TGG - chr3.2:88394266-88394285 None:intergenic 55.0%
CCGATTCCTTCTGGTCTGTG+CGG - chr3.2:88390403-88390422 None:intergenic 55.0%
CCGCACAGACCAGAAGGAAT+CGG + chr3.2:88390400-88390419 MS.gene40712:CDS 55.0%
CTTCTGCCTCCGATTCCTTC+TGG - chr3.2:88390412-88390431 None:intergenic 55.0%
GAGACGGTTTATGCGAGGTC+GGG - chr3.2:88390328-88390347 None:intergenic 55.0%
GATAGGAAGCTTGGGAAGGG+AGG + chr3.2:88390898-88390917 MS.gene40712:CDS 55.0%
GCACATCTCAGGTGCCAAAC+AGG - chr3.2:88392342-88392361 None:intergenic 55.0%
GCCAAACAGGTTCACCCCAT+AGG - chr3.2:88392329-88392348 None:intergenic 55.0%
GCCTATGGGGTGAACCTGTT+TGG + chr3.2:88392325-88392344 MS.gene40712:intron 55.0%
GGCCACAGCAAGTGGAACTT+GGG - chr3.2:88392308-88392327 None:intergenic 55.0%
GTAGGGTGAGGTCCATGCTA+AGG + chr3.2:88392200-88392219 MS.gene40712:intron 55.0%
GTGTTGGGAAAGCCGCTCAT+CGG - chr3.2:88393934-88393953 None:intergenic 55.0%
TAAGGCGAGACTCAAGCAGC+AGG - chr3.2:88391893-88391912 None:intergenic 55.0%
TAGCATGGACCTCACCCTAC+TGG - chr3.2:88392200-88392219 None:intergenic 55.0%
TGTTCTTCCCCTGCCTGCAA+TGG + chr3.2:88392620-88392639 MS.gene40712:intron 55.0%
TTCTCATCAGGGGTTCCCGA+GGG - chr3.2:88392863-88392882 None:intergenic 55.0%
TTTCTCATCAGGGGTTCCCG+AGG - chr3.2:88392864-88392883 None:intergenic 55.0%
! ACAAACTGCCGGAAAGGTGC+AGG - chr3.2:88393457-88393476 None:intergenic 55.0%
! CCGGAGCTTTATCGGCACTA+CGG - chr3.2:88390596-88390615 None:intergenic 55.0%
! GAGTGGAGCTGCTTTGCTGA+AGG + chr3.2:88391357-88391376 MS.gene40712:intron 55.0%
! GTGTTGCTGGCTGACCCATT+CGG - chr3.2:88393773-88393792 None:intergenic 55.0%
! TTCGGCTCCCGGAGCTTTAT+CGG - chr3.2:88390604-88390623 None:intergenic 55.0%
!! AGGTCCATGCTAAGGGTACC+AGG + chr3.2:88392208-88392227 MS.gene40712:intron 55.0%
!! CCGTAGTGCCGATAAAGCTC+CGG + chr3.2:88390593-88390612 MS.gene40712:CDS 55.0%
!! CGTAGTGCCGATAAAGCTCC+GGG + chr3.2:88390594-88390613 MS.gene40712:CDS 55.0%
!! GAGGGTGCTCAGAAGGTACT+TGG + chr3.2:88393586-88393605 MS.gene40712:intron 55.0%
!! GTTCCACTTGCTGTGGCCTA+TGG + chr3.2:88392310-88392329 MS.gene40712:intron 55.0%
!! TCCACTTGCTGTGGCCTATG+GGG + chr3.2:88392312-88392331 MS.gene40712:intron 55.0%
ACCCCATAGGCCACAGCAAG+TGG - chr3.2:88392316-88392335 None:intergenic 60.0%
CAGAACCAGCTCCTACGCGT+CGG - chr3.2:88390945-88390964 None:intergenic 60.0%
CGGACCTCCACATGAATGGC+AGG + chr3.2:88391298-88391317 MS.gene40712:CDS 60.0%
CGTGGTCGGTTACCTTGGCA+AGG + chr3.2:88393245-88393264 MS.gene40712:CDS 60.0%
CTCCCTTCTTCTTCGGCTCC+CGG - chr3.2:88390615-88390634 None:intergenic 60.0%
CTCCGGGAGCCGAAGAAGAA+GGG + chr3.2:88390610-88390629 MS.gene40712:CDS 60.0%
GCGGCGCGTTATCAGTGAGA+CGG - chr3.2:88390344-88390363 None:intergenic 60.0%
GGCCACTGCTGGCACTAGAT+GGG + chr3.2:88394543-88394562 MS.gene40712:CDS 60.0%
GTCACTGCTATGGCCACTGC+TGG + chr3.2:88394532-88394551 MS.gene40712:CDS 60.0%
GTCTATGTTGGCCGACGCGT+AGG + chr3.2:88390931-88390950 MS.gene40712:CDS 60.0%
TGCCCATCTAGTGCCAGCAG+TGG - chr3.2:88394548-88394567 None:intergenic 60.0%
TGGCCACTGCTGGCACTAGA+TGG + chr3.2:88394542-88394561 MS.gene40712:CDS 60.0%
TGGGTCAGCCAGCAACACAG+TGG + chr3.2:88393775-88393794 MS.gene40712:CDS 60.0%
! TCTCACTGATAACGCGCCGC+CGG + chr3.2:88390344-88390363 MS.gene40712:CDS 60.0%
!! AGCTGGTTCTGGTGCCGTTG+AGG + chr3.2:88390954-88390973 MS.gene40712:CDS 60.0%
CGAGGTCGGGTACGCAACTC+AGG - chr3.2:88390315-88390334 None:intergenic 65.0%
GCTCCGGGAGCCGAAGAAGA+AGG + chr3.2:88390609-88390628 MS.gene40712:CDS 65.0%
! CGACGCGTAGGAGCTGGTTC+TGG + chr3.2:88390943-88390962 MS.gene40712:CDS 65.0%
CCACCGCCGCACAGACCAGA+AGG + chr3.2:88390394-88390413 MS.gene40712:CDS 70.0%
CCTTCTGGTCTGTGCGGCGG+TGG - chr3.2:88390397-88390416 None:intergenic 70.0%
GTTGGCCGACGCGTAGGAGC+TGG + chr3.2:88390937-88390956 MS.gene40712:CDS 70.0%
AGCGACGGCTCTCCTCCCGC+CGG - chr3.2:88390373-88390392 None:intergenic 75.0%
CTGTGCGGCGGTGGCAGCGA+CGG - chr3.2:88390388-88390407 None:intergenic 75.0%
GATAACGCGCCGCCGGTCGC+CGG + chr3.2:88390351-88390370 MS.gene40712:CDS 75.0%
! GCTCTCCTCCCGCCGGCGAC+CGG - chr3.2:88390366-88390385 None:intergenic 80.0%
! AACGCGCCGCCGGTCGCCGG+CGG + chr3.2:88390354-88390373 MS.gene40712:CDS 85.0%
! CTCCTCCCGCCGGCGACCGG+CGG - chr3.2:88390363-88390382 None:intergenic 85.0%
! ACGCGCCGCCGGTCGCCGGC+GGG + chr3.2:88390355-88390374 MS.gene40712:CDS 90.0%
! CGCCGCCGGTCGCCGGCGGG+AGG + chr3.2:88390358-88390377 MS.gene40712:CDS 95.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 88390309 88395025 88390309 ID=MS.gene40712
chr3.2 mRNA 88390309 88395025 88390309 ID=MS.gene40712.t1;Parent=MS.gene40712
chr3.2 exon 88390309 88390656 88390309 ID=MS.gene40712.t1.exon1;Parent=MS.gene40712.t1
chr3.2 CDS 88390309 88390656 88390309 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88390865 88390975 88390865 ID=MS.gene40712.t1.exon2;Parent=MS.gene40712.t1
chr3.2 CDS 88390865 88390975 88390865 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88391254 88391327 88391254 ID=MS.gene40712.t1.exon3;Parent=MS.gene40712.t1
chr3.2 CDS 88391254 88391327 88391254 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88391427 88391496 88391427 ID=MS.gene40712.t1.exon4;Parent=MS.gene40712.t1
chr3.2 CDS 88391427 88391496 88391427 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88391579 88391634 88391579 ID=MS.gene40712.t1.exon5;Parent=MS.gene40712.t1
chr3.2 CDS 88391579 88391634 88391579 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88391738 88391809 88391738 ID=MS.gene40712.t1.exon6;Parent=MS.gene40712.t1
chr3.2 CDS 88391738 88391809 88391738 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88392817 88392911 88392817 ID=MS.gene40712.t1.exon7;Parent=MS.gene40712.t1
chr3.2 CDS 88392817 88392911 88392817 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88392990 88393056 88392990 ID=MS.gene40712.t1.exon8;Parent=MS.gene40712.t1
chr3.2 CDS 88392990 88393056 88392990 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88393145 88393274 88393145 ID=MS.gene40712.t1.exon9;Parent=MS.gene40712.t1
chr3.2 CDS 88393145 88393274 88393145 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88393382 88393600 88393382 ID=MS.gene40712.t1.exon10;Parent=MS.gene40712.t1
chr3.2 CDS 88393382 88393600 88393382 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88393693 88393835 88393693 ID=MS.gene40712.t1.exon11;Parent=MS.gene40712.t1
chr3.2 CDS 88393693 88393835 88393693 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88393914 88394088 88393914 ID=MS.gene40712.t1.exon12;Parent=MS.gene40712.t1
chr3.2 CDS 88393914 88394088 88393914 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88394220 88394310 88394220 ID=MS.gene40712.t1.exon13;Parent=MS.gene40712.t1
chr3.2 CDS 88394220 88394310 88394220 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88394446 88394603 88394446 ID=MS.gene40712.t1.exon14;Parent=MS.gene40712.t1
chr3.2 CDS 88394446 88394603 88394446 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88394696 88394884 88394696 ID=MS.gene40712.t1.exon15;Parent=MS.gene40712.t1
chr3.2 CDS 88394696 88394884 88394696 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
chr3.2 exon 88394966 88395025 88394966 ID=MS.gene40712.t1.exon16;Parent=MS.gene40712.t1
chr3.2 CDS 88394966 88395025 88394966 ID=cds.MS.gene40712.t1;Parent=MS.gene40712.t1
Gene Sequence

>MS.gene40712

ATGCCTGAGTTGCGTACCCGACCTCGCATAAACCGTCTCACTGATAACGCGCCGCCGGTCGCCGGCGGGAGGAGAGCCGTCGCTGCCACCGCCGCACAGACCAGAAGGAATCGGAGGCAGAAGAAGAAGAAGAACACGATCGTTGCCGAGAAAATCGAAAACATTGTGAATAACGACGACGAAACAGGAGTAGAGAGATTGAAAGAAGAGGAAGGAGAGAATAAGAAGAAGGCAGTGGTTAGGGTTTCTAGAGAGGAAGCTATGGATGAGTACGATAGTGGTGGCCGTAGTGCCGATAAAGCTCCGGGAGCCGAAGAAGAAGGGAGTACAACTCCACTTCCTGAGAAGGTGATTTTGATTCCTCAGAAATGTTCATAGTGAAGCATGCAAATGTTTTTGTTTTCTTCTCTATTTTTGTTTCTTGTTAATGTTTTGTTGCTAATTCGTTGTTTCTAGTTGAGTCAGACGTTATGGATTACAGCAAATTTTTTTGTTAGAAGATAATTTTTGTCATGTGTTAGGAATTTTAATGTATTTTGTTCTTTCTTAATTACAGATTCAAGTTGGTGGTTCTCCATTATATAGATTAGATAGGAAGCTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGCCGACGCGTAGGAGCTGGTTCTGGTGCCGTTGAGGTATGTACGGTGTTTATGTCTGCCATTGTGGTGCTCCGTGATTGATACATGTTGCCATTTGGGTGTCTGAATTTTTTAATTTTGTAAGGGTTGTTACATAATATTTTAGTTGGAAAAAAAAACTTTATAAAATGTAAGGGCGTTACGACCGTTATTTTGTGCCGAAGCAACGGGAATAGATATGGTGATTAAATAACATTGTTGTGGGAAAAAATTTGTACACCAAAGGCATCTATGACTTTTATAGATAGTTACAGATATTGCTCCAATAATTGCAGGTAGCATTAAAATTTGAGCATAGAAACAGCAAAGGGTGCAATTACGGACCTCCACATGAATGGCAGGTTTACAAGTGAGTTTACCCTCTTTTCTGTTTCAATAGAGTGGAGCTGCTTTGCTGAAGGCATTTTCTTTGCATGAATGCTAACTTTGCCATGCTCACTTTTTATAGCACATTAGGTGGTAGTCATGGTGTTCCACGAGTACATTACAAGGGACGGCAAGGTGACTACTACATTATGGTATGTGCTTGTAAGTTTTTTAATAAAGTAATGGGGGTTTCTATTGTCTCTGAAGGTTTTTGTAACATAATGTTACACACAGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGTAAGTATCTCTCTGTAATTTTATTGAAATGTAATTCATCATATCTTTTGTAAATGTCTTGGTCAATATAGCATGTCTAACCTTAGTTCTTTTTTGGATCTAGGATGTCTACTGAAATGGTGGCATGTATTGCAATCGAGGCTATCTCTATATTAGAGAAGATGCATTGTAGAGGGTGAGACTCATTTTCCTGGTTATATTATATTTATTATTTATACATGGGTTTTCTTTACTAACAGATTGTCTATGGGGCAGCCTGCTGCTTGAGTCTCGCCTTATGTTATCATTTGGGTGTTCCGTTTTTTTACCTCATGGGGAAACACGTTCAATCATTTGTTATTGACTATGCGTGTCACAATGAAACAACATAGTTTTTTTTTTTACCCCGAGGTTGAGCAACATTTATTTATGCAAAAATAAATCGGTTGGGAAACTATTACATCTGAAATTCTTCTGATTTAGCTCTGGATCATATAATAGAATTTGCTCATACTGTTTTACTAAATTAAGTGTTGTGGAGGAGAGGTTTCTTGTTATCCAGAGGGGTGAGGTTTCTTTTTATCCAGTAGGGTGAGGTCCATGCTAAGGGTACCAGGATCAGTGTGTCAAGCTTAATAATTTTTAACTCCCTGCAGTTTTCTCATTAGTTCAGGCTGAGAGCAGGAGTTAACCCAAGTTCCACTTGCTGTGGCCTATGGGGTGAACCTGTTTGGCACCTGAGATGTGCTCATGAAAAGTTGTGCACACACTTCATTTTGAAATTTTTCCATTACTGTATCTCAATTAAATTATTATATCATTCTGTGATTATGATAGGGACTTGGGTATTATGGGATTCATAAGTCCCAAATCAAGTAGTATGGCGTGTTGGGTGAGTATTTTAGTAGATTGGTTCTTCCTCCTTGATAGCTAGCTTTTAGGATTCCTCAAGTGCTCAGATACTTGTCATATTACAGTGTATGATCCATGCCCTCAAATTTGTTTTTGTTCTTCCCCTGCCTGCAATGGTCAATTAGTAAATACTTAAATTGCAATTATTGCTTTATCAATTACCATGCAATACCAATGTTAGTAATATAATAGATATACAAGTTTCAAATGATTTTTGTACATGTGCTCTAGTATACGTGAATTGCATCTTGTTGCAAAGATCAATTTTTCATCCTGCTGTTGTTGTTGCAGATATGTGCATGGTGATGTAAAGCCTGAAAACTTCTTGCTTGGACCCTCGGGAACCCCTGATGAGAAAAAGTTGTTTCTGGTTGATCTTGGATTAGGTAAAAAAAAAGCCATGTTACCCTTTGATGCTTTCATTGTCAATGAAGATATGCTTATTCTCTCACTTTTCTACACAGCAACTCGTTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGTTTGTTCTTTATTTAGCTTCTACAAACCTTATTTAAATCAATGTATGTATGGTTTTTGAATGATTCTGTATATCATATTCTTGGCAGGGGAACAGTTCGTTATGCTAGTGTGCATGCACATCTTGGTAGAACAAGTAGCAGGAGAGATGACTTGGAATCCCTTGCTTACACGCTTGTCTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATATCAGGTTATCTTTTTTCAAATTTGCTTATCAATTTTTTTTCTTTCAAATTTAATTACTTTAGTGTTAATACTACAAGAAAAGCATGATTCTTATGAAATTGTTTGTTACAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCACCCGAAGCTTTGTGTTGCTTTTGTCCTGCACCTTTCCGGCAGTTTGTAGAATATGTAGTAAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATACATATCCCTTTTTGATGGAATTGTAGGTCCAAATCCTGACATTAGGCCCCTAAATACCGAGGGTGCTCAGAAGGTACTTGGTTTATTATTACTTTACATGTGTTATATCATTTAAGGATTCAGAGCCATACTCTTAAAGCCCTTTTATGGGTTTGTGTTGTGAAGCTTATATGTCAGGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGTCAGCCAGCAACACAGTGGATTAGTGTTTACAATGCTCGTAGACCAATGAAACAAAGGTTTTGAGCTGACATGACATGATATTTTGCTGTTATTGTATAGTTGACCCAGTTTTGACTTTCTATATTTTGGCGTAGGTATCATTACAATGTGGCCGATGAGCGGCTTTCCCAACACATTGTAAAAGGAAATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAGTCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACATCACAAGTTTACGAACTCTCTTCCAGTTTTCTTCACAAGGTTGGTTAATTTTCATTTTTCAGTTACTCTACTATCTATTGTAATACAATTTTAGTGATATTTTTATTTGCGTTATATTAAATTCATTTTGAAGTTTATACAATTTGACAAATCATGAATCTGTTTCACAGGAATGGATTATGGAACAGTGGGATAAGAATTATTACATCAGTGCCATAGCTGGAGCTAGTAACGGGTCCTCATTGGTTGTAATGTCAAAAGGTTAAAGTCATATTCTTGATGCATTATATATTTAGGATGGAAACAGTTGACTTGACTATGCATTGCATGATATGACCAGTAGTGTTGTGTTTAAATCTTGTCTCACTTTTATTTGTGATCTGCTGTTCCTTACAGGGACCCAATACATGCAACAATCCTATAAAGTCAGTGACTCGTTTCCATTTAAGTGGATCAACAAAAAATGGAGGGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTACAGAGCAGGTTTTTTTCTTTGTTTTAGATTGAAAATTTTGTGACAGTGAAGAATTCTATCTGACATGTATATCTTCTTTTCTCTCTAAACTCGATGCTAGGTTGTGGAACTTGATTTCCTGTACCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCTGCAACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACTCAAGAAACGCTCCGCACGTCTGATTTTCCTAGTACTCATGTTAAGGTAAAATTGTGCACCTGATTTTCATGTATTCATTGTCAATCAACTATAATACATGCTTATATTTGATATATTTTTCTGCAGGAAAAATGGGCAAAGAACCTCTATATCGCATCTATTAGTTATGGGAGAACAGTTTCATAA
Protein sequence

>MS.gene40712.t1

MPELRTRPRINRLTDNAPPVAGGRRAVAATAAQTRRNRRQKKKKNTIVAEKIENIVNNDDETGVERLKEEEGENKKKAVVRVSREEAMDEYDSGGRSADKAPGAEEEGSTTPLPEKIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGSGAVEVALKFEHRNSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLICQVGQKRGRLTMEEDDDEQPKKKVRMGQPATQWISVYNARRPMKQRYHYNVADERLSQHIVKGNEDGLFISSVASCASLWALIMDAGTGFTSQVYELSSSFLHKEWIMEQWDKNYYISAIAGASNGSSLVVMSKGTQYMQQSYKVSDSFPFKWINKKWREGFFVTAMATAGTRWAIVMSRGAGFTEQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSTHVKEKWAKNLYIASISYGRTVS