Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41955.t1 | KEH26156.1 | 91.3 | 471 | 25 | 2 | 1 | 471 | 1 | 455 | 1.30E-227 | 798.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41955.t1 | Q67XQ0 | 74.7 | 446 | 100 | 3 | 22 | 464 | 26 | 461 | 1.6e-176 | 620.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41955.t1 | A0A072U9P1 | 91.3 | 471 | 25 | 2 | 1 | 471 | 1 | 455 | 9.7e-228 | 798.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058897 | MS.gene41955 | 0.847858 | 8.86E-60 | -1.69E-46 |
MS.gene060012 | MS.gene41955 | 0.801382 | 9.25E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene41955 | MS.gene060012 | PPI |
MS.gene41955 | MS.gene041452 | PPI |
MS.gene41955 | MS.gene57722 | PPI |
MS.gene41955 | MS.gene058897 | PPI |
MS.gene41955 | MS.gene036604 | PPI |
MS.gene41955 | MS.gene58727 | PPI |
MS.gene41955 | MS.gene054222 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41955.t1 | MTR_6g045467 | 92.457 | 464 | 19 | 2 | 1 | 464 | 1 | 448 | 0.0 | 827 |
MS.gene41955.t1 | MTR_6g045467 | 92.457 | 464 | 19 | 2 | 1 | 464 | 1 | 448 | 0.0 | 827 |
MS.gene41955.t1 | MTR_4g117360 | 86.141 | 469 | 61 | 1 | 1 | 465 | 1 | 469 | 0.0 | 791 |
MS.gene41955.t1 | MTR_6g045467 | 91.706 | 422 | 19 | 2 | 1 | 422 | 1 | 406 | 0.0 | 771 |
MS.gene41955.t1 | MTR_7g010900 | 68.870 | 469 | 134 | 3 | 1 | 465 | 1 | 461 | 0.0 | 639 |
MS.gene41955.t1 | MTR_6g045467 | 92.541 | 362 | 11 | 2 | 103 | 464 | 1 | 346 | 0.0 | 637 |
MS.gene41955.t1 | MTR_6g045467 | 92.011 | 363 | 13 | 2 | 102 | 464 | 3 | 349 | 0.0 | 636 |
MS.gene41955.t1 | MTR_6g045467 | 92.011 | 363 | 13 | 2 | 102 | 464 | 3 | 349 | 0.0 | 635 |
MS.gene41955.t1 | MTR_7g094620 | 63.877 | 454 | 146 | 6 | 22 | 463 | 26 | 473 | 0.0 | 521 |
MS.gene41955.t1 | MTR_4g092610 | 55.340 | 412 | 164 | 5 | 37 | 434 | 18 | 423 | 1.72e-149 | 434 |
MS.gene41955.t1 | MTR_2g010520 | 53.398 | 412 | 176 | 4 | 37 | 434 | 18 | 427 | 3.95e-139 | 407 |
MS.gene41955.t1 | MTR_3g111830 | 46.667 | 450 | 207 | 6 | 27 | 453 | 9 | 448 | 5.52e-133 | 394 |
MS.gene41955.t1 | MTR_2g010520 | 63.265 | 294 | 107 | 1 | 37 | 329 | 18 | 311 | 1.47e-131 | 384 |
MS.gene41955.t1 | MTR_6g052300 | 45.392 | 434 | 200 | 8 | 27 | 441 | 15 | 430 | 2.31e-122 | 367 |
MS.gene41955.t1 | MTR_6g051860 | 50.794 | 315 | 153 | 2 | 12 | 325 | 62 | 375 | 9.16e-109 | 330 |
MS.gene41955.t1 | MTR_2g010520 | 63.223 | 242 | 88 | 1 | 37 | 277 | 18 | 259 | 5.80e-104 | 312 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41955.t1 | AT4G14240 | 75.336 | 446 | 97 | 4 | 22 | 464 | 26 | 461 | 0.0 | 628 |
MS.gene41955.t1 | AT4G14230 | 70.067 | 451 | 128 | 2 | 17 | 465 | 20 | 465 | 0.0 | 624 |
MS.gene41955.t1 | AT4G14240 | 73.991 | 446 | 94 | 5 | 22 | 464 | 26 | 452 | 0.0 | 605 |
MS.gene41955.t1 | AT1G03270 | 65.180 | 471 | 145 | 5 | 22 | 476 | 24 | 491 | 0.0 | 564 |
MS.gene41955.t1 | AT4G14240 | 74.114 | 367 | 82 | 4 | 101 | 464 | 1 | 357 | 1.83e-173 | 493 |
MS.gene41955.t1 | AT4G33700 | 53.207 | 421 | 176 | 5 | 28 | 434 | 9 | 422 | 3.40e-142 | 415 |
MS.gene41955.t1 | AT5G52790 | 50.711 | 422 | 180 | 5 | 19 | 438 | 1 | 396 | 2.86e-140 | 410 |
MS.gene41955.t1 | AT5G52790 | 50.588 | 425 | 182 | 5 | 19 | 441 | 1 | 399 | 5.84e-140 | 412 |
MS.gene41955.t1 | AT2G14520 | 52.206 | 408 | 189 | 4 | 30 | 434 | 11 | 415 | 4.47e-138 | 404 |
MS.gene41955.t1 | AT1G47330 | 48.458 | 454 | 206 | 5 | 24 | 450 | 5 | 457 | 1.65e-137 | 407 |
MS.gene41955.t1 | AT2G14520 | 51.449 | 414 | 189 | 5 | 30 | 434 | 11 | 421 | 2.48e-136 | 400 |
MS.gene41955.t1 | AT2G14520 | 51.449 | 414 | 189 | 5 | 30 | 434 | 11 | 421 | 2.48e-136 | 400 |
MS.gene41955.t1 | AT5G52790 | 50.000 | 406 | 175 | 5 | 19 | 422 | 1 | 380 | 1.86e-130 | 384 |
MS.gene41955.t1 | AT5G52790 | 50.000 | 406 | 175 | 5 | 19 | 422 | 1 | 380 | 1.86e-130 | 384 |
MS.gene41955.t1 | AT5G52790 | 49.755 | 408 | 177 | 5 | 19 | 424 | 1 | 382 | 7.03e-130 | 385 |
MS.gene41955.t1 | AT4G33700 | 61.538 | 273 | 104 | 1 | 28 | 299 | 9 | 281 | 5.02e-117 | 346 |
MS.gene41955.t1 | AT1G47330 | 46.950 | 377 | 172 | 5 | 101 | 450 | 1 | 376 | 8.20e-109 | 331 |
MS.gene41955.t1 | AT4G33700 | 50.578 | 346 | 150 | 5 | 103 | 434 | 1 | 339 | 1.81e-105 | 318 |
MS.gene41955.t1 | AT2G14520 | 49.267 | 341 | 161 | 5 | 103 | 434 | 1 | 338 | 5.76e-102 | 309 |
Find 110 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAATCCCAGGAATATTAT+TGG | 0.236548 | 6.4:+19061271 | MS.gene41955:CDS |
CCATATGACTACTTCCCTTT+TGG | 0.252902 | 6.4:-19061605 | None:intergenic |
CTGACAGGGGTCTCTGATTC+AGG | 0.253158 | 6.4:-19061427 | None:intergenic |
TCTATGTAATGCTGTTTCTA+TGG | 0.263654 | 6.4:+19058781 | MS.gene41955:CDS |
AGGCCACATGCCACGATTCC+TGG | 0.276195 | 6.4:+19063015 | MS.gene41955:CDS |
CCGGTCAACTTTCGGATTGA+TGG | 0.299677 | 6.4:-19062216 | None:intergenic |
GTCAAGCCTTCAAAGCTTAC+TGG | 0.302358 | 6.4:+19061786 | MS.gene41955:CDS |
AAAGCTCTTGTCTCCATTCA+TGG | 0.311809 | 6.4:+19060135 | MS.gene41955:CDS |
GTGCTAGATTCCGCCCTTCC+AGG | 0.315116 | 6.4:-19063033 | None:intergenic |
CAGGTTCTGGATTGCGTACT+GGG | 0.343310 | 6.4:+19060078 | MS.gene41955:intron |
TCAGGTTCTGGATTGCGTAC+TGG | 0.343532 | 6.4:+19060077 | MS.gene41955:intron |
TAAAAGCCCAATAATATTCC+TGG | 0.351419 | 6.4:-19061278 | None:intergenic |
AACCGCTTACTGCTCCCTTT+TGG | 0.354937 | 6.4:-19062239 | None:intergenic |
GAAATCCCAGGAATATTATT+GGG | 0.356949 | 6.4:+19061272 | MS.gene41955:CDS |
AAAGAAAATGTTGATTCAAT+AGG | 0.371631 | 6.4:-19060813 | None:intergenic |
TACTCCATTGCTACAAGAAC+TGG | 0.375041 | 6.4:+19061731 | MS.gene41955:CDS |
TTAATGCCAGTAAGCTTTGA+AGG | 0.381157 | 6.4:-19061792 | None:intergenic |
CTTGATTGAAGAGTTTATCT+AGG | 0.383532 | 6.4:-19059664 | None:intergenic |
AGCCGAGTTCCTGTCTATTC+TGG | 0.385497 | 6.4:+19061250 | MS.gene41955:CDS |
AAGAGTTTATCTAGGTATAG+AGG | 0.389663 | 6.4:-19059656 | None:intergenic |
ATGTTACCCTCTTTCTTATC+CGG | 0.389771 | 6.4:+19059937 | MS.gene41955:CDS |
GCCAACGAAAGCATACCTTT+TGG | 0.390456 | 6.4:+19058165 | MS.gene41955:CDS |
ATCTCAAATCAGGGAGGCAT+TGG | 0.390658 | 6.4:+19061204 | MS.gene41955:intron |
CTCTTTGCCGGAGTCATGTC+CGG | 0.396365 | 6.4:+19058234 | MS.gene41955:CDS |
CAAGCAATTTGTAGTAGATA+TGG | 0.402882 | 6.4:+19059863 | MS.gene41955:CDS |
AAGGACGGAATCACGGATAA+AGG | 0.410119 | 6.4:+19062995 | MS.gene41955:CDS |
TTATGCAGCGATCATTCTTC+CGG | 0.415941 | 6.4:+19058721 | MS.gene41955:intron |
CCGAAAGTTGACCGGCCAAA+AGG | 0.426420 | 6.4:+19062224 | MS.gene41955:CDS |
AACAAGAAAACAGCATATTC+CGG | 0.426683 | 6.4:-19058211 | None:intergenic |
TCGTTCAGTATATCGTATAA+AGG | 0.429657 | 6.4:-19061579 | None:intergenic |
TTTAGATGTTAATTCAAAGT+TGG | 0.434582 | 6.4:+19060833 | MS.gene41955:CDS |
AATATGTTGATGTTCATAAC+AGG | 0.435184 | 6.4:+19062031 | MS.gene41955:CDS |
GGAACGACGAGGCTTTATTT+AGG | 0.438067 | 6.4:+19060100 | MS.gene41955:CDS |
CACTACGTTCAAGAATTTCA+AGG | 0.449665 | 6.4:-19058293 | None:intergenic |
CGAAAGTTGACCGGCCAAAA+GGG | 0.460989 | 6.4:+19062225 | MS.gene41955:CDS |
TTATACCTCCATGCCATGAA+TGG | 0.470063 | 6.4:-19060148 | None:intergenic |
CCAAAAGGGAAGTAGTCATA+TGG | 0.470886 | 6.4:+19061605 | MS.gene41955:CDS |
GTAGAATTTACCTTTCCAAC+CGG | 0.473889 | 6.4:-19059956 | None:intergenic |
TACCCTCTTTCTTATCCGGT+TGG | 0.476027 | 6.4:+19059941 | MS.gene41955:CDS |
TATACTGAACGAGTTCCAAA+AGG | 0.480137 | 6.4:+19061590 | MS.gene41955:CDS |
CGGATAGATACTGCACTGAC+AGG | 0.486816 | 6.4:-19061442 | None:intergenic |
TTGGCGAGAGCATGATGGTC+AGG | 0.488438 | 6.4:-19058147 | None:intergenic |
AATATTCACGGTGAAGTGAT+TGG | 0.493535 | 6.4:+19061870 | MS.gene41955:CDS |
AGTGATTGGTATTATCACTT+TGG | 0.495868 | 6.4:+19061884 | MS.gene41955:CDS |
TTCTCTTCATCAATTAGTTG+TGG | 0.497519 | 6.4:-19061666 | None:intergenic |
CTGTCAGTGCAGTATCTATC+CGG | 0.501210 | 6.4:+19061443 | MS.gene41955:CDS |
AGTTGCAGCTGCTTCCTCAA+TGG | 0.501520 | 6.4:+19062185 | MS.gene41955:CDS |
GTTGTGAAGACTACGGGAAA+AGG | 0.504332 | 6.4:+19061633 | MS.gene41955:CDS |
GTCATGTCCGGTCTCACACT+TGG | 0.509099 | 6.4:+19058246 | MS.gene41955:CDS |
GAATCCAGTTCTTGTAGCAA+TGG | 0.511663 | 6.4:-19061735 | None:intergenic |
ATGTTAATTCAAAGTTGGAC+TGG | 0.514990 | 6.4:+19060838 | MS.gene41955:CDS |
AAACACACCGTGGTATTCTC+CGG | 0.516611 | 6.4:-19061462 | None:intergenic |
TCTCAAATCAGGGAGGCATT+GGG | 0.517004 | 6.4:+19061205 | MS.gene41955:intron |
CATGAGACCAAGTGTGAGAC+CGG | 0.518128 | 6.4:-19058253 | None:intergenic |
CTCAAGAGGGTAAGCGGGAA+AGG | 0.520366 | 6.4:+19062976 | MS.gene41955:CDS |
CTGGGATTTCCAGAATAGAC+AGG | 0.522711 | 6.4:-19061259 | None:intergenic |
CAGGAACTCGGCTGTGCCCG+CGG | 0.523586 | 6.4:-19061240 | None:intergenic |
AGCACTTGATTTGACCGAAA+AGG | 0.528383 | 6.4:+19060332 | MS.gene41955:CDS |
GAAGTAAAGTAACAAGAAGC+TGG | 0.529515 | 6.4:-19058760 | None:intergenic |
ACGCACAAGCCATGAAAAGT+TGG | 0.534177 | 6.4:-19059900 | None:intergenic |
TCCAAAAGGTATGCTTTCGT+TGG | 0.534308 | 6.4:-19058166 | None:intergenic |
AAAAGCCCAATAATATTCCT+GGG | 0.537470 | 6.4:-19061277 | None:intergenic |
AGCGGGAAAGGACGGAATCA+CGG | 0.544015 | 6.4:+19062988 | MS.gene41955:CDS |
AGGAACTCGGCTGTGCCCGC+GGG | 0.545017 | 6.4:-19061239 | None:intergenic |
CCTTCTTACGAAAATATTCA+CGG | 0.545232 | 6.4:+19061858 | MS.gene41955:CDS |
ACATGCCACGATTCCTGGAA+GGG | 0.545699 | 6.4:+19063020 | MS.gene41955:CDS |
TGGGAAAGATTCTTGCCCGC+GGG | 0.549753 | 6.4:+19061224 | MS.gene41955:CDS |
TAAGTCTCAAGAGGGTAAGC+GGG | 0.551610 | 6.4:+19062971 | MS.gene41955:CDS |
CCATCAATCCGAAAGTTGAC+CGG | 0.552352 | 6.4:+19062216 | MS.gene41955:CDS |
TCTTTCTTATCCGGTTGGAA+AGG | 0.558257 | 6.4:+19059946 | MS.gene41955:CDS |
TCGTATAAAGGCATATCAGA+TGG | 0.565213 | 6.4:-19061567 | None:intergenic |
TATCTACTACAAATTGCTTG+TGG | 0.565273 | 6.4:-19059860 | None:intergenic |
ATCCATGTTGCAGATCCAAA+AGG | 0.568878 | 6.4:-19058180 | None:intergenic |
TGATGGAGCTCGTGCCATTG+AGG | 0.569237 | 6.4:-19062199 | None:intergenic |
CTTGAAATTCTTGAACGTAG+TGG | 0.572868 | 6.4:+19058294 | MS.gene41955:CDS |
AGTAGATATGGTCTTGCTGT+AGG | 0.575361 | 6.4:+19059875 | MS.gene41955:CDS |
CACATGCCACGATTCCTGGA+AGG | 0.577469 | 6.4:+19063019 | MS.gene41955:CDS |
CTGTCTATTCTGGAAATCCC+AGG | 0.579697 | 6.4:+19061260 | MS.gene41955:CDS |
TTTCCAACCGGATAAGAAAG+AGG | 0.579776 | 6.4:-19059944 | None:intergenic |
GCTGCTGTTGTGAAGACTAC+GGG | 0.582286 | 6.4:+19061627 | MS.gene41955:CDS |
ATGTAATGCTGTTTCTATGG+AGG | 0.583032 | 6.4:+19058784 | MS.gene41955:CDS |
TTGCATGCAGGAAGAAATTG+TGG | 0.584566 | 6.4:+19061996 | MS.gene41955:intron |
AGAGGGTAAGCGGGAAAGGA+CGG | 0.587640 | 6.4:+19062980 | MS.gene41955:CDS |
GGATAGATACTGCACTGACA+GGG | 0.588476 | 6.4:-19061441 | None:intergenic |
CTAAGTCTCAAGAGGGTAAG+CGG | 0.591364 | 6.4:+19062970 | MS.gene41955:CDS |
CTTCCAGGAATCGTGGCATG+TGG | 0.592987 | 6.4:-19063018 | None:intergenic |
GGCTGCTGTTGTGAAGACTA+CGG | 0.594701 | 6.4:+19061626 | MS.gene41955:CDS |
TGCAGCGATCATTCTTCCGG+TGG | 0.596464 | 6.4:+19058724 | MS.gene41955:intron |
ATACTGAACGAGTTCCAAAA+GGG | 0.596540 | 6.4:+19061591 | MS.gene41955:CDS |
ACTAGTTTGCAGACTAGTGA+TGG | 0.600874 | 6.4:+19061822 | MS.gene41955:CDS |
ACTAGTGATGGCACATTAAG+CGG | 0.601228 | 6.4:+19061834 | MS.gene41955:CDS |
TCTTGTCTCCATTCATGGCA+TGG | 0.603983 | 6.4:+19060140 | MS.gene41955:CDS |
TGTGAGACCGGACATGACTC+CGG | 0.604884 | 6.4:-19058241 | None:intergenic |
TTGGGAAAGATTCTTGCCCG+CGG | 0.604895 | 6.4:+19061223 | MS.gene41955:CDS |
TTTCGTTGGCGAGAGCATGA+TGG | 0.622269 | 6.4:-19058152 | None:intergenic |
TTCCAACCGGATAAGAAAGA+GGG | 0.628963 | 6.4:-19059943 | None:intergenic |
GGTGCTGACTAAGTCTCAAG+AGG | 0.631021 | 6.4:+19062962 | MS.gene41955:CDS |
TTCCGCCCTTCCAGGAATCG+TGG | 0.634116 | 6.4:-19063025 | None:intergenic |
TGCCACGATTCCTGGAAGGG+CGG | 0.640280 | 6.4:+19063023 | MS.gene41955:CDS |
GATGAGACAACAATTATCAG+TGG | 0.641472 | 6.4:+19060309 | MS.gene41955:CDS |
TGTCTCCATTCATGGCATGG+AGG | 0.641880 | 6.4:+19060143 | MS.gene41955:CDS |
GGAAGAAATTGTGGATGAGA+CGG | 0.647783 | 6.4:+19062005 | MS.gene41955:intron |
TTCCAGAATAGACAGGAACT+CGG | 0.650536 | 6.4:-19061252 | None:intergenic |
AGGTTCTGGATTGCGTACTG+GGG | 0.664585 | 6.4:+19060079 | MS.gene41955:intron |
GATAGATACTGCACTGACAG+GGG | 0.670187 | 6.4:-19061440 | None:intergenic |
GCAACATGGATTGCTTACGC+CGG | 0.670459 | 6.4:+19058192 | MS.gene41955:CDS |
GTGCTGACTAAGTCTCAAGA+GGG | 0.686971 | 6.4:+19062963 | MS.gene41955:CDS |
TTGCGTACTGGGGAACGACG+AGG | 0.706727 | 6.4:+19060089 | MS.gene41955:CDS |
TATCTATCCGGAGAATACCA+CGG | 0.709255 | 6.4:+19061455 | MS.gene41955:CDS |
GTCCCCACAGGATAAACACG+TGG | 0.738674 | 6.4:+19062941 | MS.gene41955:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATTAAAGAAACTATT+GGG | - | chr6.4:19058373-19058392 | None:intergenic | 10.0% |
!! | AATTAATATTCTATGAAATA+CGG | + | chr6.4:19058393-19058412 | MS.gene41955:intron | 10.0% |
!! | AATTATTTAGTTAATATTCA+CGG | + | chr6.4:19058529-19058548 | MS.gene41955:intron | 10.0% |
!! | TAAATAATTAAAGAAACTAT+TGG | - | chr6.4:19058374-19058393 | None:intergenic | 10.0% |
!! | AAAAAAAAAAATGACTGAAT+TGG | + | chr6.4:19060939-19060958 | MS.gene41955:intron | 15.0% |
!! | AAAATTTGTAAAATTTGTAG+AGG | - | chr6.4:19059321-19059340 | None:intergenic | 15.0% |
!! | AAATTTGTAAAATTTGTAGA+GGG | - | chr6.4:19059320-19059339 | None:intergenic | 15.0% |
!! | ATTAAGAAAACACAAAAATT+AGG | - | chr6.4:19060395-19060414 | None:intergenic | 15.0% |
!! | TAAACTAATTTATTGTTGAA+TGG | - | chr6.4:19062589-19062608 | None:intergenic | 15.0% |
!!! | GTATTGTTTATAAGTTTTTA+AGG | - | chr6.4:19059147-19059166 | None:intergenic | 15.0% |
!!! | TTACAATGGTATATATTTTA+GGG | + | chr6.4:19061542-19061561 | MS.gene41955:intron | 15.0% |
!!! | TTATGTTTTGTTATAGAAAT+AGG | + | chr6.4:19058970-19058989 | MS.gene41955:intron | 15.0% |
!!! | TTCAGTCATTTTTTTTTTTA+TGG | - | chr6.4:19060938-19060957 | None:intergenic | 15.0% |
!!! | TTTACAATGGTATATATTTT+AGG | + | chr6.4:19061541-19061560 | MS.gene41955:intron | 15.0% |
!!! | TTTTAAATTATTTGTTGTGT+CGG | + | chr6.4:19058648-19058667 | MS.gene41955:intron | 15.0% |
!! | AAATGAAGAAAATGAAATCT+TGG | - | chr6.4:19060990-19061009 | None:intergenic | 20.0% |
!! | AGTTAATTCTTAAGATATTG+AGG | - | chr6.4:19062666-19062685 | None:intergenic | 20.0% |
!! | ATATACCATTGTAAATCAAT+TGG | - | chr6.4:19061536-19061555 | None:intergenic | 20.0% |
!! | ATATCTTAAGAATTAACTCT+TGG | + | chr6.4:19062668-19062687 | MS.gene41955:intron | 20.0% |
!! | GAAAATTGTATCTTCATAAA+CGG | + | chr6.4:19059105-19059124 | MS.gene41955:intron | 20.0% |
!! | GACAAGTTATTATTATTAGT+TGG | - | chr6.4:19059821-19059840 | None:intergenic | 20.0% |
!! | GATAATGCATAATATATGTA+AGG | + | chr6.4:19060890-19060909 | MS.gene41955:intron | 20.0% |
!! | TTAATTAGATAGTTAAGTGA+AGG | + | chr6.4:19062620-19062639 | MS.gene41955:intron | 20.0% |
!! | TTTAGATGTTAATTCAAAGT+TGG | + | chr6.4:19060833-19060852 | MS.gene41955:CDS | 20.0% |
!!! | AAAGAAAATGTTGATTCAAT+AGG | - | chr6.4:19060816-19060835 | None:intergenic | 20.0% |
!!! | AAATTCCAATTGATTTACAA+TGG | + | chr6.4:19061528-19061547 | MS.gene41955:intron | 20.0% |
!!! | AGTCATTTTTTTTTTTATGG+TGG | - | chr6.4:19060935-19060954 | None:intergenic | 20.0% |
!!! | CAACAATAAATATTTTCCAA+TGG | - | chr6.4:19061066-19061085 | None:intergenic | 20.0% |
!!! | CAATTGATAGTATTAATACA+TGG | - | chr6.4:19059377-19059396 | None:intergenic | 20.0% |
!!! | GATAAACATTGTTTTGTAAA+TGG | - | chr6.4:19059294-19059313 | None:intergenic | 20.0% |
!!! | TTTTCAGGAAAATAAAATAG+TGG | - | chr6.4:19061170-19061189 | None:intergenic | 20.0% |
! | AATAAGCTAATCCTAGTTTA+TGG | + | chr6.4:19059212-19059231 | MS.gene41955:intron | 25.0% |
! | AATAGTCAACGCATTAAAAA+TGG | - | chr6.4:19058124-19058143 | None:intergenic | 25.0% |
! | AATATGTTGATGTTCATAAC+AGG | + | chr6.4:19062031-19062050 | MS.gene41955:CDS | 25.0% |
! | ACAACATAGAAATTACTAGA+TGG | - | chr6.4:19060761-19060780 | None:intergenic | 25.0% |
! | AGAAAATAAGTGATTTCAGT+TGG | - | chr6.4:19062307-19062326 | None:intergenic | 25.0% |
! | ATATAAGGATGGAATTATCA+TGG | - | chr6.4:19062534-19062553 | None:intergenic | 25.0% |
! | ATGTCTTAACATGAATTGAA+AGG | + | chr6.4:19062411-19062430 | MS.gene41955:intron | 25.0% |
! | CATGTATTAAGAAAAGTTGT+TGG | - | chr6.4:19059489-19059508 | None:intergenic | 25.0% |
! | GAAAATAAGTGATTTCAGTT+GGG | - | chr6.4:19062306-19062325 | None:intergenic | 25.0% |
! | TTAAAAATTTATTCCCGTTG+CGG | + | chr6.4:19061485-19061504 | MS.gene41955:intron | 25.0% |
! | TTAACTAGTGTCTTCTATTT+GGG | + | chr6.4:19060489-19060508 | MS.gene41955:intron | 25.0% |
! | TTGCATATATCTTACATGTA+GGG | - | chr6.4:19061114-19061133 | None:intergenic | 25.0% |
! | TTTAACTAGTGTCTTCTATT+TGG | + | chr6.4:19060488-19060507 | MS.gene41955:intron | 25.0% |
! | TTTGATGCAAAGAAAAATGT+TGG | + | chr6.4:19061690-19061709 | MS.gene41955:CDS | 25.0% |
! | TTTGCATATATCTTACATGT+AGG | - | chr6.4:19061115-19061134 | None:intergenic | 25.0% |
!! | AAAATAAGTCTTGTCAACTT+TGG | + | chr6.4:19060193-19060212 | MS.gene41955:intron | 25.0% |
!!! | AAATTTTTAAAAACACACCG+TGG | - | chr6.4:19061475-19061494 | None:intergenic | 25.0% |
!!! | AATGGTCTTGTAATTAGAAT+TGG | - | chr6.4:19059276-19059295 | None:intergenic | 25.0% |
!!! | ATTTAACCTGCTTGTTTTTT+AGG | + | chr6.4:19060260-19060279 | MS.gene41955:intron | 25.0% |
!!! | ATTTCATTCAGTTTTATGTG+CGG | - | chr6.4:19061970-19061989 | None:intergenic | 25.0% |
!!! | ATTTTTTTTTTTATGGTGGC+CGG | - | chr6.4:19060931-19060950 | None:intergenic | 25.0% |
!!! | GTTACTTTCGTTCTTTTTTT+CGG | + | chr6.4:19059707-19059726 | MS.gene41955:CDS | 25.0% |
!!! | TCTTAGTTTCTTTGTTGTTA+GGG | + | chr6.4:19060868-19060887 | MS.gene41955:intron | 25.0% |
!!! | TTCTTAGTTTCTTTGTTGTT+AGG | + | chr6.4:19060867-19060886 | MS.gene41955:intron | 25.0% |
AAAAGCCCAATAATATTCCT+GGG | - | chr6.4:19061280-19061299 | None:intergenic | 30.0% | |
AAAGAAACTATTGGGTTAAG+AGG | - | chr6.4:19058365-19058384 | None:intergenic | 30.0% | |
AACAAGAAAACAGCATATTC+CGG | - | chr6.4:19058214-19058233 | None:intergenic | 30.0% | |
AACAGCTTTCAAACAAACAA+AGG | - | chr6.4:19058886-19058905 | None:intergenic | 30.0% | |
AACCTGAAACAAATATTCGT+TGG | - | chr6.4:19060064-19060083 | None:intergenic | 30.0% | |
AAGAGTTTATCTAGGTATAG+AGG | - | chr6.4:19059659-19059678 | None:intergenic | 30.0% | |
AAGATGAAGTTTATGAAGCA+CGG | - | chr6.4:19058703-19058722 | None:intergenic | 30.0% | |
AATGATGTTGGAAATGGAAT+AGG | + | chr6.4:19060528-19060547 | MS.gene41955:intron | 30.0% | |
AGAAATGTGATAGCTTAAGT+TGG | + | chr6.4:19062765-19062784 | MS.gene41955:intron | 30.0% | |
AGAACTTCGTAAAATTGCTT+AGG | - | chr6.4:19059794-19059813 | None:intergenic | 30.0% | |
AGTGATTGGTATTATCACTT+TGG | + | chr6.4:19061884-19061903 | MS.gene41955:CDS | 30.0% | |
ATATATGCAAAACATATGCG+TGG | + | chr6.4:19061124-19061143 | MS.gene41955:intron | 30.0% | |
ATCCAACGAATATTTGTTTC+AGG | + | chr6.4:19060059-19060078 | MS.gene41955:intron | 30.0% | |
ATGATGTTGGAAATGGAATA+GGG | + | chr6.4:19060529-19060548 | MS.gene41955:intron | 30.0% | |
ATGCAAAGAAAAATGTTGGT+GGG | + | chr6.4:19061694-19061713 | MS.gene41955:CDS | 30.0% | |
ATGCTCTTTATACAAGCATA+TGG | - | chr6.4:19060714-19060733 | None:intergenic | 30.0% | |
ATGTTAATTCAAAGTTGGAC+TGG | + | chr6.4:19060838-19060857 | MS.gene41955:CDS | 30.0% | |
CAAGCAATTTGTAGTAGATA+TGG | + | chr6.4:19059863-19059882 | MS.gene41955:CDS | 30.0% | |
CCTTCTTACGAAAATATTCA+CGG | + | chr6.4:19061858-19061877 | MS.gene41955:CDS | 30.0% | |
CTTGATTGAAGAGTTTATCT+AGG | - | chr6.4:19059667-19059686 | None:intergenic | 30.0% | |
GAAACAAATATTCGTTGGAT+AGG | - | chr6.4:19060059-19060078 | None:intergenic | 30.0% | |
GAAATCCCAGGAATATTATT+GGG | + | chr6.4:19061272-19061291 | MS.gene41955:CDS | 30.0% | |
GAAATGTGATAGCTTAAGTT+GGG | + | chr6.4:19062766-19062785 | MS.gene41955:intron | 30.0% | |
GTCTTGTAATTAGAATTGGA+GGG | - | chr6.4:19059272-19059291 | None:intergenic | 30.0% | |
GTTAGATGTTCCGATAAAAA+GGG | + | chr6.4:19059517-19059536 | MS.gene41955:intron | 30.0% | |
TAAAAGCCCAATAATATTCC+TGG | - | chr6.4:19061281-19061300 | None:intergenic | 30.0% | |
TATCTACTACAAATTGCTTG+TGG | - | chr6.4:19059863-19059882 | None:intergenic | 30.0% | |
TCAGGAAAATAAAATAGTGG+AGG | - | chr6.4:19061167-19061186 | None:intergenic | 30.0% | |
TCGTTCAGTATATCGTATAA+AGG | - | chr6.4:19061582-19061601 | None:intergenic | 30.0% | |
TGCATATATCTTACATGTAG+GGG | - | chr6.4:19061113-19061132 | None:intergenic | 30.0% | |
TGTTAGATGTTCCGATAAAA+AGG | + | chr6.4:19059516-19059535 | MS.gene41955:intron | 30.0% | |
TTCAGTGTAATTACAAGTGT+CGG | - | chr6.4:19058601-19058620 | None:intergenic | 30.0% | |
TTCTCTTCATCAATTAGTTG+TGG | - | chr6.4:19061669-19061688 | None:intergenic | 30.0% | |
TTGGGCTATATTTCTTATGA+CGG | - | chr6.4:19062695-19062714 | None:intergenic | 30.0% | |
TTGTTGAATGGAATATGACT+TGG | - | chr6.4:19062577-19062596 | None:intergenic | 30.0% | |
! | TTTGAGCTTGAAGCTTTTAA+TGG | - | chr6.4:19062469-19062488 | None:intergenic | 30.0% |
! | TTTTCCAATGGTCTAGTAAT+TGG | - | chr6.4:19061054-19061073 | None:intergenic | 30.0% |
!! | CAATGTCTTTCTGGAATATA+AGG | - | chr6.4:19062549-19062568 | None:intergenic | 30.0% |
!! | GGAATTTTTCACAGTTTGTT+TGG | - | chr6.4:19061515-19061534 | None:intergenic | 30.0% |
!! | TCTATGTAATGCTGTTTCTA+TGG | + | chr6.4:19058781-19058800 | MS.gene41955:CDS | 30.0% |
!!! | TTTTTTTTTTTATGGTGGCC+GGG | - | chr6.4:19060930-19060949 | None:intergenic | 30.0% |
AACACCAATTACTAGACCAT+TGG | + | chr6.4:19061047-19061066 | MS.gene41955:intron | 35.0% | |
AAGTTTATGAAGCACGGATA+TGG | - | chr6.4:19058697-19058716 | None:intergenic | 35.0% | |
AATATTCACGGTGAAGTGAT+TGG | + | chr6.4:19061870-19061889 | MS.gene41955:CDS | 35.0% | |
ACAAGCACTTACCATAAACT+AGG | - | chr6.4:19059226-19059245 | None:intergenic | 35.0% | |
AGATAAGCGCTTATTCTCTA+AGG | + | chr6.4:19059003-19059022 | MS.gene41955:intron | 35.0% | |
AGCATACTGAGATAGAATCT+CGG | + | chr6.4:19062829-19062848 | MS.gene41955:intron | 35.0% | |
AGCATCAATGATGTTGGAAA+TGG | + | chr6.4:19060522-19060541 | MS.gene41955:intron | 35.0% | |
ATACATTCTCGTGCATACTT+GGG | + | chr6.4:19060643-19060662 | MS.gene41955:intron | 35.0% | |
ATACTGAACGAGTTCCAAAA+GGG | + | chr6.4:19061591-19061610 | MS.gene41955:CDS | 35.0% | |
ATAGTACAGATGTTGTTCCA+TGG | + | chr6.4:19059982-19060001 | MS.gene41955:intron | 35.0% | |
ATATATCTTACATGTAGGGG+TGG | - | chr6.4:19061110-19061129 | None:intergenic | 35.0% | |
ATGTTACCCTCTTTCTTATC+CGG | + | chr6.4:19059937-19059956 | MS.gene41955:CDS | 35.0% | |
ATTGGACATTTGAAAGCCAA+TGG | - | chr6.4:19059624-19059643 | None:intergenic | 35.0% | |
CACTACGTTCAAGAATTTCA+AGG | - | chr6.4:19058296-19058315 | None:intergenic | 35.0% | |
CATAATATATGTAAGGTCCG+AGG | + | chr6.4:19060897-19060916 | MS.gene41955:intron | 35.0% | |
CCAAGAATAAAATAGTTGCG+TGG | - | chr6.4:19060224-19060243 | None:intergenic | 35.0% | |
CTATTCTCGTATATAGACGA+TGG | + | chr6.4:19060018-19060037 | MS.gene41955:intron | 35.0% | |
CTTGAAATTCTTGAACGTAG+TGG | + | chr6.4:19058294-19058313 | MS.gene41955:CDS | 35.0% | |
CTTTCAAATGTCCAATATGC+AGG | + | chr6.4:19059628-19059647 | MS.gene41955:intron | 35.0% | |
GAAGTAAAGTAACAAGAAGC+TGG | - | chr6.4:19058763-19058782 | None:intergenic | 35.0% | |
GATGAGACAACAATTATCAG+TGG | + | chr6.4:19060309-19060328 | MS.gene41955:CDS | 35.0% | |
GATGCAAAGAAAAATGTTGG+TGG | + | chr6.4:19061693-19061712 | MS.gene41955:CDS | 35.0% | |
GGAAATCCCAGGAATATTAT+TGG | + | chr6.4:19061271-19061290 | MS.gene41955:CDS | 35.0% | |
GGTTCACAATTGATTGTGAA+AGG | - | chr6.4:19060374-19060393 | None:intergenic | 35.0% | |
GTAGAATTTACCTTTCCAAC+CGG | - | chr6.4:19059959-19059978 | None:intergenic | 35.0% | |
TATACTGAACGAGTTCCAAA+AGG | + | chr6.4:19061590-19061609 | MS.gene41955:CDS | 35.0% | |
TGCAAAGAAAAATGTTGGTG+GGG | + | chr6.4:19061695-19061714 | MS.gene41955:CDS | 35.0% | |
TTGCTATCTTTGTACTTCAC+TGG | + | chr6.4:19059749-19059768 | MS.gene41955:intron | 35.0% | |
TTTCACAAGCTCAAACCAAA+CGG | - | chr6.4:19059031-19059050 | None:intergenic | 35.0% | |
TTTCGTGTTTCTCTGTTGTA+TGG | + | chr6.4:19062378-19062397 | MS.gene41955:intron | 35.0% | |
! | AAGCATTTTCTCAGCTCAAT+AGG | - | chr6.4:19062332-19062351 | None:intergenic | 35.0% |
! | AATTGCAGCACTTACCTTTT+CGG | - | chr6.4:19060349-19060368 | None:intergenic | 35.0% |
! | CCACGCAACTATTTTATTCT+TGG | + | chr6.4:19060221-19060240 | MS.gene41955:intron | 35.0% |
! | CCGTGAATATTTTCGTAAGA+AGG | - | chr6.4:19061861-19061880 | None:intergenic | 35.0% |
! | GGTCTTGTAATTAGAATTGG+AGG | - | chr6.4:19059273-19059292 | None:intergenic | 35.0% |
! | TAGGCAGGATAAAAGTTTTC+AGG | - | chr6.4:19061185-19061204 | None:intergenic | 35.0% |
! | TCGTATAAAGGCATATCAGA+TGG | - | chr6.4:19061570-19061589 | None:intergenic | 35.0% |
! | TGTTTTCTTGTTCTCTTTGC+CGG | + | chr6.4:19058222-19058241 | MS.gene41955:CDS | 35.0% |
! | TTAATGCCAGTAAGCTTTGA+AGG | - | chr6.4:19061795-19061814 | None:intergenic | 35.0% |
! | TTCGTTGGATAGGTAGTTTT+CGG | - | chr6.4:19060049-19060068 | None:intergenic | 35.0% |
!! | ATGTAATGCTGTTTCTATGG+AGG | + | chr6.4:19058784-19058803 | MS.gene41955:CDS | 35.0% |
!! | CGAATATTTGTTTCAGGTTC+TGG | + | chr6.4:19060065-19060084 | MS.gene41955:intron | 35.0% |
!! | GTCTTTCTGGAATATAAGGA+TGG | - | chr6.4:19062545-19062564 | None:intergenic | 35.0% |
!!! | TTGTTTTTTAGGCTGGGAAA+GGG | + | chr6.4:19060271-19060290 | MS.gene41955:intron | 35.0% |
!!! | TTTCGTTCTTTTTTTCGGTG+AGG | + | chr6.4:19059712-19059731 | MS.gene41955:CDS | 35.0% |
!!! | TTTTTTTTTTATGGTGGCCG+GGG | - | chr6.4:19060929-19060948 | None:intergenic | 35.0% |
AAAGCTCTTGTCTCCATTCA+TGG | + | chr6.4:19060135-19060154 | MS.gene41955:CDS | 40.0% | |
AAGGATGGAATTATCATGGC+AGG | - | chr6.4:19062530-19062549 | None:intergenic | 40.0% | |
AATGCTTCCTCTATGGAGTT+CGG | + | chr6.4:19062345-19062364 | MS.gene41955:intron | 40.0% | |
AATTTCTTCCTGCATGCAAG+AGG | - | chr6.4:19061995-19062014 | None:intergenic | 40.0% | |
ACATGATCACTGGAAGTGAA+CGG | - | chr6.4:19060611-19060630 | None:intergenic | 40.0% | |
ACTAGTGATGGCACATTAAG+CGG | + | chr6.4:19061834-19061853 | MS.gene41955:CDS | 40.0% | |
ACTATTGGGTTAAGAGGAAG+AGG | - | chr6.4:19058359-19058378 | None:intergenic | 40.0% | |
AGGATGGAATTATCATGGCA+GGG | - | chr6.4:19062529-19062548 | None:intergenic | 40.0% | |
ATACTGAGATAGAATCTCGG+AGG | + | chr6.4:19062832-19062851 | MS.gene41955:intron | 40.0% | |
ATCCATGTTGCAGATCCAAA+AGG | - | chr6.4:19058183-19058202 | None:intergenic | 40.0% | |
ATCCTGCCTATCTCAAATCA+GGG | + | chr6.4:19061195-19061214 | MS.gene41955:intron | 40.0% | |
ATGTTGGGCTATGTCCATTA+TGG | - | chr6.4:19062729-19062748 | None:intergenic | 40.0% | |
CAAAGAGTTAGGCAGGTTTA+GGG | - | chr6.4:19059597-19059616 | None:intergenic | 40.0% | |
CATACATTCTCGTGCATACT+TGG | + | chr6.4:19060642-19060661 | MS.gene41955:intron | 40.0% | |
CCAAAAGGGAAGTAGTCATA+TGG | + | chr6.4:19061605-19061624 | MS.gene41955:CDS | 40.0% | |
CCTTCTCAGAAAAAACAAGC+TGG | + | chr6.4:19058321-19058340 | MS.gene41955:CDS | 40.0% | |
CTGAGAAAATGCTTCCTCTA+TGG | + | chr6.4:19062338-19062357 | MS.gene41955:intron | 40.0% | |
CTTGGGTTCTCTCTATTCTT+TGG | + | chr6.4:19060660-19060679 | MS.gene41955:intron | 40.0% | |
GAATCCAGTTCTTGTAGCAA+TGG | - | chr6.4:19061738-19061757 | None:intergenic | 40.0% | |
GCACGAGAATGTATGACTAA+CGG | - | chr6.4:19060637-19060656 | None:intergenic | 40.0% | |
GGAAGAAATTGTGGATGAGA+CGG | + | chr6.4:19062005-19062024 | MS.gene41955:intron | 40.0% | |
GGTTGAATTAACCATGTGCT+CGG | + | chr6.4:19062791-19062810 | MS.gene41955:intron | 40.0% | |
TAAGTGTAGTGTCACATAGC+AGG | - | chr6.4:19058455-19058474 | None:intergenic | 40.0% | |
TAATATTCACGGACAGTCCT+TGG | + | chr6.4:19058540-19058559 | MS.gene41955:intron | 40.0% | |
TACTCCATTGCTACAAGAAC+TGG | + | chr6.4:19061731-19061750 | MS.gene41955:CDS | 40.0% | |
TATCCTGCCTATCTCAAATC+AGG | + | chr6.4:19061194-19061213 | MS.gene41955:intron | 40.0% | |
TATCTATCCGGAGAATACCA+CGG | + | chr6.4:19061455-19061474 | MS.gene41955:CDS | 40.0% | |
TATGAAATACGGACACTCCT+TGG | + | chr6.4:19058404-19058423 | MS.gene41955:intron | 40.0% | |
TCAAAGAGTTAGGCAGGTTT+AGG | - | chr6.4:19059598-19059617 | None:intergenic | 40.0% | |
TCACGTGACTATGTGATGTT+GGG | - | chr6.4:19062744-19062763 | None:intergenic | 40.0% | |
TCCAAATCCATCTCGGATAT+GGG | - | chr6.4:19062900-19062919 | None:intergenic | 40.0% | |
TCTTTCTTATCCGGTTGGAA+AGG | + | chr6.4:19059946-19059965 | MS.gene41955:CDS | 40.0% | |
TGAAATTACCTCTTGCATGC+AGG | + | chr6.4:19061984-19062003 | MS.gene41955:intron | 40.0% | |
TTATACCTCCATGCCATGAA+TGG | - | chr6.4:19060151-19060170 | None:intergenic | 40.0% | |
TTATGCAGCGATCATTCTTC+CGG | + | chr6.4:19058721-19058740 | MS.gene41955:intron | 40.0% | |
TTCACAAGCTCAAACCAAAC+GGG | - | chr6.4:19059030-19059049 | None:intergenic | 40.0% | |
TTCCAACCGGATAAGAAAGA+GGG | - | chr6.4:19059946-19059965 | None:intergenic | 40.0% | |
TTCCAGAATAGACAGGAACT+CGG | - | chr6.4:19061255-19061274 | None:intergenic | 40.0% | |
TTCCGATAAAAAGGGACTGT+GGG | + | chr6.4:19059525-19059544 | MS.gene41955:intron | 40.0% | |
TTGCATGCAGGAAGAAATTG+TGG | + | chr6.4:19061996-19062015 | MS.gene41955:intron | 40.0% | |
TTGGACAAGCAATGTCTTTC+TGG | - | chr6.4:19062558-19062577 | None:intergenic | 40.0% | |
TTTCCAACCGGATAAGAAAG+AGG | - | chr6.4:19059947-19059966 | None:intergenic | 40.0% | |
! | ACTAGTTTGCAGACTAGTGA+TGG | + | chr6.4:19061822-19061841 | MS.gene41955:CDS | 40.0% |
! | AGCACTTGATTTGACCGAAA+AGG | + | chr6.4:19060332-19060351 | MS.gene41955:CDS | 40.0% |
! | AGTAGATATGGTCTTGCTGT+AGG | + | chr6.4:19059875-19059894 | MS.gene41955:CDS | 40.0% |
! | CCATATGACTACTTCCCTTT+TGG | - | chr6.4:19061608-19061627 | None:intergenic | 40.0% |
! | GTTGTTTCCCTCAAACTAGT+AGG | + | chr6.4:19061082-19061101 | MS.gene41955:intron | 40.0% |
! | TAACTTGTCGCTCTAATTGC+AGG | + | chr6.4:19059832-19059851 | MS.gene41955:intron | 40.0% |
! | TACCTTTTGGATCTGCAACA+TGG | + | chr6.4:19058178-19058197 | MS.gene41955:CDS | 40.0% |
! | TCCAAAAGGTATGCTTTCGT+TGG | - | chr6.4:19058169-19058188 | None:intergenic | 40.0% |
! | TTTTTAACAGACTGCTGAGG+AGG | + | chr6.4:19060782-19060801 | MS.gene41955:intron | 40.0% |
!! | ATTATGGCAGAGGGGTATTT+GGG | - | chr6.4:19062713-19062732 | None:intergenic | 40.0% |
!! | GTAATTACAAGTGTCGGTGT+CGG | - | chr6.4:19058595-19058614 | None:intergenic | 40.0% |
!! | GTGTTTTTAACAGACTGCTG+AGG | + | chr6.4:19060779-19060798 | MS.gene41955:intron | 40.0% |
!! | TGTGATAGCTTAAGTTGGGA+CGG | + | chr6.4:19062770-19062789 | MS.gene41955:intron | 40.0% |
!!! | AACCTGCTTGTTTTTTAGGC+TGG | + | chr6.4:19060264-19060283 | MS.gene41955:intron | 40.0% |
!!! | ACCTGCTTGTTTTTTAGGCT+GGG | + | chr6.4:19060265-19060284 | MS.gene41955:intron | 40.0% |
!!! | CCAGCTTGTTTTTTCTGAGA+AGG | - | chr6.4:19058324-19058343 | None:intergenic | 40.0% |
!!! | CGGTGAGTTTTGGAATAACA+CGG | - | chr6.4:19060591-19060610 | None:intergenic | 40.0% |
!!! | CTTGTTTTTTAGGCTGGGAA+AGG | + | chr6.4:19060270-19060289 | MS.gene41955:intron | 40.0% |
!!! | TGGTGTTGCTTTTTAACCAC+CGG | - | chr6.4:19058743-19058762 | None:intergenic | 40.0% |
!!! | TGTTTTTTAGGCTGGGAAAG+GGG | + | chr6.4:19060272-19060291 | MS.gene41955:intron | 40.0% |
AAACACACCGTGGTATTCTC+CGG | - | chr6.4:19061465-19061484 | None:intergenic | 45.0% | |
AAGGACGGAATCACGGATAA+AGG | + | chr6.4:19062995-19063014 | MS.gene41955:CDS | 45.0% | |
AATGGCCTCCAAATCCATCT+CGG | - | chr6.4:19062907-19062926 | None:intergenic | 45.0% | |
ACGCACAAGCCATGAAAAGT+TGG | - | chr6.4:19059903-19059922 | None:intergenic | 45.0% | |
ATGCTTCCTCTATGGAGTTC+GGG | + | chr6.4:19062346-19062365 | MS.gene41955:intron | 45.0% | |
CAAATACCCCTCTGCCATAA+TGG | + | chr6.4:19062712-19062731 | MS.gene41955:intron | 45.0% | |
CCAATGGCTGTCAAAGAGTT+AGG | - | chr6.4:19059608-19059627 | None:intergenic | 45.0% | |
CCATCAATCCGAAAGTTGAC+CGG | + | chr6.4:19062216-19062235 | MS.gene41955:CDS | 45.0% | |
CCTAACTCTTTGACAGCCAT+TGG | + | chr6.4:19059605-19059624 | MS.gene41955:intron | 45.0% | |
CTAACGGAACACATGATCAC+TGG | - | chr6.4:19060621-19060640 | None:intergenic | 45.0% | |
CTAAGTCTCAAGAGGGTAAG+CGG | + | chr6.4:19062970-19062989 | MS.gene41955:CDS | 45.0% | |
CTATGTCCATTATGGCAGAG+GGG | - | chr6.4:19062721-19062740 | None:intergenic | 45.0% | |
CTCACGTGACTATGTGATGT+TGG | - | chr6.4:19062745-19062764 | None:intergenic | 45.0% | |
CTCCAAATCCATCTCGGATA+TGG | - | chr6.4:19062901-19062920 | None:intergenic | 45.0% | |
CTGGGATTTCCAGAATAGAC+AGG | - | chr6.4:19061262-19061281 | None:intergenic | 45.0% | |
CTGTCAGTGCAGTATCTATC+CGG | + | chr6.4:19061443-19061462 | MS.gene41955:CDS | 45.0% | |
GCTATGTCCATTATGGCAGA+GGG | - | chr6.4:19062722-19062741 | None:intergenic | 45.0% | |
GTCAAGCCTTCAAAGCTTAC+TGG | + | chr6.4:19061786-19061805 | MS.gene41955:CDS | 45.0% | |
GTTCCGATAAAAAGGGACTG+TGG | + | chr6.4:19059524-19059543 | MS.gene41955:intron | 45.0% | |
GTTGTGAAGACTACGGGAAA+AGG | + | chr6.4:19061633-19061652 | MS.gene41955:CDS | 45.0% | |
GTTTGTTTGGAAGACCGCAA+CGG | - | chr6.4:19061502-19061521 | None:intergenic | 45.0% | |
TAAGTCTCAAGAGGGTAAGC+GGG | + | chr6.4:19062971-19062990 | MS.gene41955:CDS | 45.0% | |
TACCCTCTTTCTTATCCGGT+TGG | + | chr6.4:19059941-19059960 | MS.gene41955:CDS | 45.0% | |
TAGAGGAAGAGCCTGCATAT+TGG | - | chr6.4:19059642-19059661 | None:intergenic | 45.0% | |
TCACAAGCTCAAACCAAACG+GGG | - | chr6.4:19059029-19059048 | None:intergenic | 45.0% | |
TCCCAGCCTAAAAAACAAGC+AGG | - | chr6.4:19060269-19060288 | None:intergenic | 45.0% | |
TCTCTTGTCATGACCCGTAA+AGG | + | chr6.4:19062859-19062878 | MS.gene41955:intron | 45.0% | |
TCTTGTCTCCATTCATGGCA+TGG | + | chr6.4:19060140-19060159 | MS.gene41955:CDS | 45.0% | |
TGAAGCACGGATATGGACAA+CGG | - | chr6.4:19058690-19058709 | None:intergenic | 45.0% | |
TTAAGACCCGAACTCCATAG+AGG | - | chr6.4:19062355-19062374 | None:intergenic | 45.0% | |
TTTGTTTGGAAGACCGCAAC+GGG | - | chr6.4:19061501-19061520 | None:intergenic | 45.0% | |
! | ACCCATATCCGAGATGGATT+TGG | + | chr6.4:19062896-19062915 | MS.gene41955:intron | 45.0% |
! | ATCTCAAATCAGGGAGGCAT+TGG | + | chr6.4:19061204-19061223 | MS.gene41955:intron | 45.0% |
! | ATGCCTCCCTGATTTGAGAT+AGG | - | chr6.4:19061204-19061223 | None:intergenic | 45.0% |
! | CATATCCGAGATGGATTTGG+AGG | + | chr6.4:19062899-19062918 | MS.gene41955:intron | 45.0% |
! | CTCCCACAGTCCCTTTTTAT+CGG | - | chr6.4:19059530-19059549 | None:intergenic | 45.0% |
! | CTGTAGGTGCCAACTTTTCA+TGG | + | chr6.4:19059891-19059910 | MS.gene41955:CDS | 45.0% |
! | CTGTCTATTCTGGAAATCCC+AGG | + | chr6.4:19061260-19061279 | MS.gene41955:CDS | 45.0% |
! | GATAGATACTGCACTGACAG+GGG | - | chr6.4:19061443-19061462 | None:intergenic | 45.0% |
! | GGACCTAGTCAAAAGCGTAA+TGG | - | chr6.4:19062925-19062944 | None:intergenic | 45.0% |
! | GGATAGATACTGCACTGACA+GGG | - | chr6.4:19061444-19061463 | None:intergenic | 45.0% |
! | GGTGGATCCTACTAGTTTGA+GGG | - | chr6.4:19061092-19061111 | None:intergenic | 45.0% |
! | TGGAAGTGAACGGTGAGTTT+TGG | - | chr6.4:19060601-19060620 | None:intergenic | 45.0% |
!! | AGGCCATTACGCTTTTGACT+AGG | + | chr6.4:19062919-19062938 | MS.gene41955:intron | 45.0% |
!! | CATTATGGCAGAGGGGTATT+TGG | - | chr6.4:19062714-19062733 | None:intergenic | 45.0% |
!! | CTGGGAAGCATCAATGATGT+TGG | + | chr6.4:19060516-19060535 | MS.gene41955:intron | 45.0% |
!! | GCCAACGAAAGCATACCTTT+TGG | + | chr6.4:19058165-19058184 | MS.gene41955:CDS | 45.0% |
!! | GGAACGACGAGGCTTTATTT+AGG | + | chr6.4:19060100-19060119 | MS.gene41955:CDS | 45.0% |
!! | GTGCTGACTAAGTCTCAAGA+GGG | + | chr6.4:19062963-19062982 | MS.gene41955:CDS | 45.0% |
!! | TCTCAAATCAGGGAGGCATT+GGG | + | chr6.4:19061205-19061224 | MS.gene41955:intron | 45.0% |
!! | TTATTCTCTAAGGCCCCGTT+TGG | + | chr6.4:19059013-19059032 | MS.gene41955:intron | 45.0% |
!!! | GTTTTTTAGGCTGGGAAAGG+GGG | + | chr6.4:19060273-19060292 | MS.gene41955:intron | 45.0% |
!!! | TTTTCTTTTTATAAATAATT+AGG | + | chr6.4:19061381-19061400 | MS.gene41955:intron | 5.0% |
ACATGCCACGATTCCTGGAA+GGG | + | chr6.4:19063020-19063039 | MS.gene41955:CDS | 50.0% | |
ACTAGACTCCGCTCCTTTAC+GGG | - | chr6.4:19062875-19062894 | None:intergenic | 50.0% | |
AGCACCACGTGTTTATCCTG+TGG | - | chr6.4:19062948-19062967 | None:intergenic | 50.0% | |
AGCCGAGTTCCTGTCTATTC+TGG | + | chr6.4:19061250-19061269 | MS.gene41955:CDS | 50.0% | |
AGTTGCAGCTGCTTCCTCAA+TGG | + | chr6.4:19062185-19062204 | MS.gene41955:CDS | 50.0% | |
ATACGGACACTCCTTGGATC+AGG | + | chr6.4:19058410-19058429 | MS.gene41955:intron | 50.0% | |
ATAGCCAGAGCTTGATGCCA+TGG | - | chr6.4:19060002-19060021 | None:intergenic | 50.0% | |
CACCACGTGTTTATCCTGTG+GGG | - | chr6.4:19062946-19062965 | None:intergenic | 50.0% | |
CACTAGACTCCGCTCCTTTA+CGG | - | chr6.4:19062876-19062895 | None:intergenic | 50.0% | |
CATGAGACCAAGTGTGAGAC+CGG | - | chr6.4:19058256-19058275 | None:intergenic | 50.0% | |
CCGGTCAACTTTCGGATTGA+TGG | - | chr6.4:19062219-19062238 | None:intergenic | 50.0% | |
CGAAAGTTGACCGGCCAAAA+GGG | + | chr6.4:19062225-19062244 | MS.gene41955:CDS | 50.0% | |
CTAGTGACCCATATCCGAGA+TGG | + | chr6.4:19062890-19062909 | MS.gene41955:intron | 50.0% | |
CTGAGATAGAATCTCGGAGG+AGG | + | chr6.4:19062835-19062854 | MS.gene41955:intron | 50.0% | |
CTGCCTATCTCAAATCAGGG+AGG | + | chr6.4:19061198-19061217 | MS.gene41955:intron | 50.0% | |
GCACCACGTGTTTATCCTGT+GGG | - | chr6.4:19062947-19062966 | None:intergenic | 50.0% | |
GCTGCTGTTGTGAAGACTAC+GGG | + | chr6.4:19061627-19061646 | MS.gene41955:CDS | 50.0% | |
GGCTATGTCCATTATGGCAG+AGG | - | chr6.4:19062723-19062742 | None:intergenic | 50.0% | |
GGCTGCTGTTGTGAAGACTA+CGG | + | chr6.4:19061626-19061645 | MS.gene41955:CDS | 50.0% | |
GTCTTCTATTTGGGCACGCT+GGG | + | chr6.4:19060498-19060517 | MS.gene41955:intron | 50.0% | |
TATGGACAACGGACACGACA+TGG | - | chr6.4:19058679-19058698 | None:intergenic | 50.0% | |
TCACGGACAGTCCTTGGATT+AGG | + | chr6.4:19058546-19058565 | MS.gene41955:intron | 50.0% | |
TGGCTGTCAAAGAGTTAGGC+AGG | - | chr6.4:19059604-19059623 | None:intergenic | 50.0% | |
TGTCATGACCCGTAAAGGAG+CGG | + | chr6.4:19062864-19062883 | MS.gene41955:intron | 50.0% | |
TGTCTCCATTCATGGCATGG+AGG | + | chr6.4:19060143-19060162 | MS.gene41955:CDS | 50.0% | |
TGTCTTCTATTTGGGCACGC+TGG | + | chr6.4:19060497-19060516 | MS.gene41955:intron | 50.0% | |
TGTTCCATGGCATCAAGCTC+TGG | + | chr6.4:19059995-19060014 | MS.gene41955:intron | 50.0% | |
TTGGGAAAGATTCTTGCCCG+CGG | + | chr6.4:19061223-19061242 | MS.gene41955:CDS | 50.0% | |
! | AACCGCTTACTGCTCCCTTT+TGG | - | chr6.4:19062242-19062261 | None:intergenic | 50.0% |
! | CCTTTTGGCCGGTCAACTTT+CGG | - | chr6.4:19062227-19062246 | None:intergenic | 50.0% |
! | CGGATAGATACTGCACTGAC+AGG | - | chr6.4:19061445-19061464 | None:intergenic | 50.0% |
! | CTCCCTGATTTGAGATAGGC+AGG | - | chr6.4:19061200-19061219 | None:intergenic | 50.0% |
! | GCAACATGGATTGCTTACGC+CGG | + | chr6.4:19058192-19058211 | MS.gene41955:CDS | 50.0% |
! | GGGTGGATCCTACTAGTTTG+AGG | - | chr6.4:19061093-19061112 | None:intergenic | 50.0% |
! | TTTCGTTGGCGAGAGCATGA+TGG | - | chr6.4:19058155-19058174 | None:intergenic | 50.0% |
!! | AGGTTCTGGATTGCGTACTG+GGG | + | chr6.4:19060079-19060098 | MS.gene41955:intron | 50.0% |
!! | CAGGTTCTGGATTGCGTACT+GGG | + | chr6.4:19060078-19060097 | MS.gene41955:intron | 50.0% |
!! | GGTGCTGACTAAGTCTCAAG+AGG | + | chr6.4:19062962-19062981 | MS.gene41955:CDS | 50.0% |
!! | TCAGGTTCTGGATTGCGTAC+TGG | + | chr6.4:19060077-19060096 | MS.gene41955:intron | 50.0% |
AAGGTCCGAGGTTCAAACCC+CGG | + | chr6.4:19060909-19060928 | MS.gene41955:intron | 55.0% | |
ACATAGCAGGTGTCCGACAC+CGG | - | chr6.4:19058442-19058461 | None:intergenic | 55.0% | |
AGAGGGTAAGCGGGAAAGGA+CGG | + | chr6.4:19062980-19062999 | MS.gene41955:CDS | 55.0% | |
AGCGGGAAAGGACGGAATCA+CGG | + | chr6.4:19062988-19063007 | MS.gene41955:CDS | 55.0% | |
CACATGCCACGATTCCTGGA+AGG | + | chr6.4:19063019-19063038 | MS.gene41955:CDS | 55.0% | |
CCGAAAGTTGACCGGCCAAA+AGG | + | chr6.4:19062224-19062243 | MS.gene41955:CDS | 55.0% | |
CTCAAGAGGGTAAGCGGGAA+AGG | + | chr6.4:19062976-19062995 | MS.gene41955:CDS | 55.0% | |
CTCTTTGCCGGAGTCATGTC+CGG | + | chr6.4:19058234-19058253 | MS.gene41955:CDS | 55.0% | |
CTGACAGGGGTCTCTGATTC+AGG | - | chr6.4:19061430-19061449 | None:intergenic | 55.0% | |
CTTCCAGGAATCGTGGCATG+TGG | - | chr6.4:19063021-19063040 | None:intergenic | 55.0% | |
GGCCAAAAGGGAGCAGTAAG+CGG | + | chr6.4:19062237-19062256 | MS.gene41955:intron | 55.0% | |
GTCATGTCCGGTCTCACACT+TGG | + | chr6.4:19058246-19058265 | MS.gene41955:CDS | 55.0% | |
GTCCCCACAGGATAAACACG+TGG | + | chr6.4:19062941-19062960 | MS.gene41955:intron | 55.0% | |
TAACCATGTGCTCGGCGTGT+GGG | + | chr6.4:19062799-19062818 | MS.gene41955:intron | 55.0% | |
TCCTTGGATCAGGTGTGTCC+CGG | + | chr6.4:19058420-19058439 | MS.gene41955:intron | 55.0% | |
TGCAGCGATCATTCTTCCGG+TGG | + | chr6.4:19058724-19058743 | MS.gene41955:intron | 55.0% | |
TGGGAAAGATTCTTGCCCGC+GGG | + | chr6.4:19061224-19061243 | MS.gene41955:CDS | 55.0% | |
TGTCGGACATGACACGACAC+CGG | - | chr6.4:19058578-19058597 | None:intergenic | 55.0% | |
TGTGAGACCGGACATGACTC+CGG | - | chr6.4:19058244-19058263 | None:intergenic | 55.0% | |
TTAACCATGTGCTCGGCGTG+TGG | + | chr6.4:19062798-19062817 | MS.gene41955:intron | 55.0% | |
! | GCTTACTGCTCCCTTTTGGC+CGG | - | chr6.4:19062238-19062257 | None:intergenic | 55.0% |
! | TCCTTGGATTAGGCGTGTCC+CGG | + | chr6.4:19058556-19058575 | MS.gene41955:intron | 55.0% |
! | TGATGGAGCTCGTGCCATTG+AGG | - | chr6.4:19062202-19062221 | None:intergenic | 55.0% |
! | TTGGCGAGAGCATGATGGTC+AGG | - | chr6.4:19058150-19058169 | None:intergenic | 55.0% |
!! | GCTTTTGACTAGGTCCCCAC+AGG | + | chr6.4:19062929-19062948 | MS.gene41955:intron | 55.0% |
ACCGGGACACACCTGATCCA+AGG | - | chr6.4:19058424-19058443 | None:intergenic | 60.0% | |
ACCGGGACACGCCTAATCCA+AGG | - | chr6.4:19058560-19058579 | None:intergenic | 60.0% | |
AGGCCACATGCCACGATTCC+TGG | + | chr6.4:19063015-19063034 | MS.gene41955:CDS | 60.0% | |
CATAGCAGGTGTCCGACACC+GGG | - | chr6.4:19058441-19058460 | None:intergenic | 60.0% | |
GATCAGGTGTGTCCCGGTGT+CGG | + | chr6.4:19058426-19058445 | MS.gene41955:intron | 60.0% | |
GTCGGACATGACACGACACC+GGG | - | chr6.4:19058577-19058596 | None:intergenic | 60.0% | |
TGCCACGATTCCTGGAAGGG+CGG | + | chr6.4:19063023-19063042 | MS.gene41955:CDS | 60.0% | |
TTCCGCCCTTCCAGGAATCG+TGG | - | chr6.4:19063028-19063047 | None:intergenic | 60.0% | |
TTGCGTACTGGGGAACGACG+AGG | + | chr6.4:19060089-19060108 | MS.gene41955:CDS | 60.0% | |
GGTGGCCGGGGTTTGAACCT+CGG | - | chr6.4:19060917-19060936 | None:intergenic | 65.0% | |
TCTCCCACACGCCGAGCACA+TGG | - | chr6.4:19062805-19062824 | None:intergenic | 65.0% | |
AGGAACTCGGCTGTGCCCGC+GGG | - | chr6.4:19061242-19061261 | None:intergenic | 70.0% | |
CAGGAACTCGGCTGTGCCCG+CGG | - | chr6.4:19061243-19061262 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 19058108 | 19063052 | 19058108 | ID=MS.gene41955 |
chr6.4 | mRNA | 19058108 | 19063052 | 19058108 | ID=MS.gene41955.t1;Parent=MS.gene41955 |
chr6.4 | exon | 19058108 | 19058342 | 19058108 | ID=MS.gene41955.t1.exon1;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19058108 | 19058342 | 19058108 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19058729 | 19058805 | 19058729 | ID=MS.gene41955.t1.exon2;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19058729 | 19058805 | 19058729 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19059650 | 19059733 | 19059650 | ID=MS.gene41955.t1.exon3;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19059650 | 19059733 | 19059650 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19059854 | 19059967 | 19059854 | ID=MS.gene41955.t1.exon4;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19059854 | 19059967 | 19059854 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19060081 | 19060164 | 19060081 | ID=MS.gene41955.t1.exon5;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19060081 | 19060164 | 19060081 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19060282 | 19060353 | 19060282 | ID=MS.gene41955.t1.exon6;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19060282 | 19060353 | 19060282 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19060792 | 19060859 | 19060792 | ID=MS.gene41955.t1.exon7;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19060792 | 19060859 | 19060792 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19061216 | 19061303 | 19061216 | ID=MS.gene41955.t1.exon8;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19061216 | 19061303 | 19061216 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19061403 | 19061476 | 19061403 | ID=MS.gene41955.t1.exon9;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19061403 | 19061476 | 19061403 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19061563 | 19061932 | 19061563 | ID=MS.gene41955.t1.exon10;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19061563 | 19061932 | 19061563 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19062006 | 19062052 | 19062006 | ID=MS.gene41955.t1.exon11;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19062006 | 19062052 | 19062006 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19062170 | 19062251 | 19062170 | ID=MS.gene41955.t1.exon12;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19062170 | 19062251 | 19062170 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
chr6.4 | exon | 19062951 | 19063052 | 19062951 | ID=MS.gene41955.t1.exon13;Parent=MS.gene41955.t1 |
chr6.4 | CDS | 19062951 | 19063052 | 19062951 | ID=cds.MS.gene41955.t1;Parent=MS.gene41955.t1 |
Gene Sequence |
Protein sequence |