Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58727.t1 | XP_013458176.1 | 98.9 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 1.50E-252 | 881.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58727.t1 | Q67XQ0 | 74.3 | 471 | 105 | 4 | 4 | 468 | 1 | 461 | 2.9e-183 | 642.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58727.t1 | A0A072UR85 | 98.9 | 469 | 5 | 0 | 1 | 469 | 1 | 469 | 1.1e-252 | 881.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041452 | MS.gene58727 | PPI |
| MS.gene57722 | MS.gene58727 | PPI |
| MS.gene058897 | MS.gene58727 | PPI |
| MS.gene054222 | MS.gene58727 | PPI |
| MS.gene060012 | MS.gene58727 | PPI |
| MS.gene58727 | MS.gene060012 | PPI |
| MS.gene41955 | MS.gene58727 | PPI |
| MS.gene036604 | MS.gene58727 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58727.t1 | MTR_4g117360 | 99.360 | 469 | 3 | 0 | 1 | 469 | 1 | 469 | 0.0 | 954 |
| MS.gene58727.t1 | MTR_6g045467 | 85.169 | 472 | 50 | 3 | 1 | 472 | 1 | 452 | 0.0 | 785 |
| MS.gene58727.t1 | MTR_6g045467 | 85.684 | 468 | 47 | 3 | 1 | 468 | 1 | 448 | 0.0 | 785 |
| MS.gene58727.t1 | MTR_6g045467 | 85.446 | 426 | 42 | 3 | 1 | 426 | 1 | 406 | 0.0 | 734 |
| MS.gene58727.t1 | MTR_7g010900 | 73.617 | 470 | 116 | 2 | 1 | 470 | 1 | 462 | 0.0 | 694 |
| MS.gene58727.t1 | MTR_6g045467 | 86.066 | 366 | 35 | 2 | 107 | 472 | 1 | 350 | 0.0 | 612 |
| MS.gene58727.t1 | MTR_6g045467 | 85.792 | 366 | 36 | 2 | 107 | 472 | 4 | 353 | 0.0 | 611 |
| MS.gene58727.t1 | MTR_6g045467 | 86.464 | 362 | 33 | 2 | 107 | 468 | 4 | 349 | 0.0 | 610 |
| MS.gene58727.t1 | MTR_7g094620 | 63.871 | 465 | 146 | 8 | 18 | 467 | 16 | 473 | 0.0 | 530 |
| MS.gene58727.t1 | MTR_4g092610 | 56.835 | 417 | 150 | 7 | 41 | 438 | 18 | 423 | 7.28e-157 | 452 |
| MS.gene58727.t1 | MTR_2g010520 | 52.083 | 432 | 151 | 5 | 41 | 438 | 18 | 427 | 4.88e-144 | 419 |
| MS.gene58727.t1 | MTR_3g111830 | 49.321 | 442 | 207 | 7 | 31 | 457 | 9 | 448 | 4.58e-141 | 414 |
| MS.gene58727.t1 | MTR_2g010520 | 66.207 | 290 | 97 | 1 | 41 | 329 | 18 | 307 | 1.87e-137 | 399 |
| MS.gene58727.t1 | MTR_6g052300 | 44.907 | 432 | 205 | 6 | 31 | 445 | 15 | 430 | 7.88e-123 | 367 |
| MS.gene58727.t1 | MTR_6g051860 | 52.303 | 304 | 143 | 2 | 35 | 337 | 81 | 383 | 6.40e-110 | 332 |
| MS.gene58727.t1 | MTR_2g010520 | 66.116 | 242 | 81 | 1 | 41 | 281 | 18 | 259 | 9.40e-110 | 326 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58727.t1 | AT4G14230 | 71.520 | 467 | 124 | 4 | 7 | 469 | 4 | 465 | 0.0 | 657 |
| MS.gene58727.t1 | AT4G14240 | 74.522 | 471 | 104 | 4 | 4 | 468 | 1 | 461 | 0.0 | 652 |
| MS.gene58727.t1 | AT4G14240 | 73.036 | 471 | 102 | 5 | 4 | 468 | 1 | 452 | 0.0 | 628 |
| MS.gene58727.t1 | AT1G03270 | 70.163 | 429 | 103 | 6 | 26 | 441 | 24 | 440 | 0.0 | 578 |
| MS.gene58727.t1 | AT4G14240 | 75.815 | 368 | 76 | 3 | 105 | 469 | 1 | 358 | 1.92e-180 | 511 |
| MS.gene58727.t1 | AT4G33700 | 54.458 | 415 | 180 | 4 | 32 | 438 | 9 | 422 | 2.67e-145 | 422 |
| MS.gene58727.t1 | AT2G14520 | 52.542 | 413 | 180 | 4 | 34 | 438 | 11 | 415 | 2.99e-144 | 419 |
| MS.gene58727.t1 | AT5G52790 | 49.885 | 433 | 189 | 4 | 23 | 453 | 1 | 407 | 3.90e-144 | 422 |
| MS.gene58727.t1 | AT5G52790 | 50.711 | 422 | 180 | 4 | 23 | 442 | 1 | 396 | 1.25e-143 | 418 |
| MS.gene58727.t1 | AT2G14520 | 51.790 | 419 | 180 | 5 | 34 | 438 | 11 | 421 | 1.63e-142 | 416 |
| MS.gene58727.t1 | AT2G14520 | 51.790 | 419 | 180 | 5 | 34 | 438 | 11 | 421 | 1.63e-142 | 416 |
| MS.gene58727.t1 | AT1G47330 | 48.696 | 460 | 205 | 6 | 28 | 460 | 5 | 460 | 3.18e-139 | 411 |
| MS.gene58727.t1 | AT5G52790 | 49.754 | 406 | 176 | 4 | 23 | 426 | 1 | 380 | 1.41e-133 | 392 |
| MS.gene58727.t1 | AT5G52790 | 49.754 | 406 | 176 | 4 | 23 | 426 | 1 | 380 | 1.41e-133 | 392 |
| MS.gene58727.t1 | AT5G52790 | 49.510 | 408 | 178 | 4 | 23 | 428 | 1 | 382 | 8.31e-133 | 392 |
| MS.gene58727.t1 | AT4G33700 | 63.370 | 273 | 99 | 1 | 32 | 303 | 9 | 281 | 9.05e-121 | 355 |
| MS.gene58727.t1 | AT1G47330 | 47.258 | 383 | 171 | 6 | 105 | 460 | 1 | 379 | 9.52e-110 | 332 |
| MS.gene58727.t1 | AT4G33700 | 52.059 | 340 | 154 | 4 | 107 | 438 | 1 | 339 | 7.21e-109 | 327 |
| MS.gene58727.t1 | AT2G14520 | 49.711 | 346 | 152 | 5 | 107 | 438 | 1 | 338 | 1.19e-107 | 323 |
Find 96 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATCACAAGAATGTTAT+TGG | 0.177078 | 8.1:-9926195 | MS.gene58727:CDS |
| CTAACAGGGGTCTCAGTTTC+AGG | 0.192605 | 8.1:+9926047 | None:intergenic |
| TTTAGATGTTAATTCAAAAT+TGG | 0.212617 | 8.1:-9926595 | MS.gene58727:CDS |
| CCATATGACTGCTTCCCTTT+TGG | 0.241590 | 8.1:+9925869 | None:intergenic |
| AAAGCTCTTGTCTCTATTCA+TGG | 0.289224 | 8.1:-9927347 | MS.gene58727:CDS |
| CGGATAGATACAGCGCTAAC+AGG | 0.299933 | 8.1:+9926032 | None:intergenic |
| AATATGTTGACGTTCATAAA+AGG | 0.310754 | 8.1:-9925424 | MS.gene58727:intron |
| TTTCCAACCGGGTACGAAAC+TGG | 0.322532 | 8.1:+9928178 | None:intergenic |
| GCTAATGAAGGCATACCTTT+TGG | 0.326864 | 8.1:-9929376 | MS.gene58727:CDS |
| AAGAGTTTATCTAGGTATAT+AGG | 0.329324 | 8.1:+9928465 | None:intergenic |
| AGCCGAGTTCCCGTCTATTC+TGG | 0.360558 | 8.1:-9926216 | MS.gene58727:CDS |
| TTCTCTTCATCAATTATTTG+TGG | 0.363799 | 8.1:+9925808 | None:intergenic |
| AAAGAAAATGTTGATTCAAT+AGG | 0.371631 | 8.1:+9926615 | None:intergenic |
| AACCACTTACCGCTCCCTTT+TGG | 0.374636 | 8.1:+9925240 | None:intergenic |
| GAAATCACAAGAATGTTATT+GGG | 0.377510 | 8.1:-9926194 | MS.gene58727:CDS |
| GGCATGATGAGGCTTTATTC+AGG | 0.377562 | 8.1:-9927382 | MS.gene58727:CDS |
| ATTGATTGAAGAGTTTATCT+AGG | 0.378174 | 8.1:+9928457 | None:intergenic |
| CCCATCATCAATAAGCAAAC+TGG | 0.382736 | 8.1:-9925670 | MS.gene58727:CDS |
| ACCAGTTTGCTTATTGATGA+TGG | 0.384869 | 8.1:+9925669 | None:intergenic |
| CAAGCAATTTGTAGTAGATA+TGG | 0.402882 | 8.1:-9928259 | MS.gene58727:CDS |
| TTGATGATGGGAAGCTTTGA+AGG | 0.403525 | 8.1:+9925682 | None:intergenic |
| TCATATGGCTGCTGTTGTTA+AGG | 0.420938 | 8.1:-9925854 | MS.gene58727:CDS |
| AGCTGCCGCTGCTTCCTCAA+TGG | 0.433653 | 8.1:-9925294 | MS.gene58727:CDS |
| AAGCCTCATCATGCCCCAAT+AGG | 0.441306 | 8.1:+9927390 | None:intergenic |
| GTAGAATATACCTTTCCAAC+CGG | 0.448140 | 8.1:+9928166 | None:intergenic |
| ATCATGTCCGGTCTCACTCT+TGG | 0.448727 | 8.1:-9929295 | MS.gene58727:CDS |
| TGCTTTGCTGGTATCATGTC+CGG | 0.448882 | 8.1:-9929307 | MS.gene58727:CDS |
| CCAAAAGGGAAGCAGTCATA+TGG | 0.465308 | 8.1:-9925869 | MS.gene58727:CDS |
| TTTGAAGATGGTGAAGTGAT+TGG | 0.468353 | 8.1:-9925604 | MS.gene58727:CDS |
| CCAGTCATCCTTCGGACTGA+TGG | 0.471692 | 8.1:+9925263 | None:intergenic |
| GGCTGCTGTTGTTAAGGCTA+AGG | 0.472294 | 8.1:-9925848 | MS.gene58727:CDS |
| CCGAAGGATGACTGGCCAAA+AGG | 0.472298 | 8.1:-9925255 | MS.gene58727:CDS |
| ATCTCAAATTAGGGAGGCAA+TGG | 0.473873 | 8.1:-9926262 | MS.gene58727:intron |
| GTTGTTAAGGCTAAGGGAAA+AGG | 0.473905 | 8.1:-9925841 | MS.gene58727:CDS |
| CACTACGTTCAAGAATTTCA+AGG | 0.475897 | 8.1:+9929248 | None:intergenic |
| TATACTGAATGAGTTCCAAA+AGG | 0.484142 | 8.1:-9925884 | MS.gene58727:CDS |
| CCATCAGTCCGAAGGATGAC+TGG | 0.485460 | 8.1:-9925263 | MS.gene58727:CDS |
| CCGTAGGTGCTAACTTTGCA+TGG | 0.487422 | 8.1:-9928231 | MS.gene58727:CDS |
| GAATTTGCTGAATGCTTTGA+CGG | 0.492871 | 8.1:-9929434 | MS.gene58727:CDS |
| CGAAGGATGACTGGCCAAAA+GGG | 0.495403 | 8.1:-9925254 | MS.gene58727:CDS |
| AGTGATTGGTATTATCACTT+TGG | 0.495868 | 8.1:-9925590 | MS.gene58727:CDS |
| CTGTTAGCGCTGTATCTATC+CGG | 0.502206 | 8.1:-9926031 | MS.gene58727:CDS |
| TACTCCATTGCTACAAAAGC+AGG | 0.506972 | 8.1:-9925743 | MS.gene58727:CDS |
| ATGTTAATTCAAAATTGGAC+TGG | 0.509824 | 8.1:-9926590 | MS.gene58727:intron |
| CCAGTTTGCTTATTGATGAT+GGG | 0.511983 | 8.1:+9925670 | None:intergenic |
| CAGTTTCAGGTCGTACAGTA+AGG | 0.515161 | 8.1:+9926060 | None:intergenic |
| CTGTAATGCCGTTGCTATGG+AGG | 0.519256 | 8.1:-9929027 | MS.gene58727:intron |
| CACTTATCACTCGCTAATGA+AGG | 0.520066 | 8.1:-9929388 | MS.gene58727:CDS |
| AGCCCTTGATTTGACCGAAA+AGG | 0.520737 | 8.1:-9927168 | MS.gene58727:intron |
| AAACACACCGTGGAATTCTC+CGG | 0.521397 | 8.1:+9926012 | None:intergenic |
| TCTCTGTAATGCCGTTGCTA+TGG | 0.526784 | 8.1:-9929030 | MS.gene58727:CDS |
| GGATAGATACAGCGCTAACA+GGG | 0.529414 | 8.1:+9926033 | None:intergenic |
| TATATCATAGAGAGGCATAT+CGG | 0.531276 | 8.1:+9925903 | None:intergenic |
| CTTCATTAGCGAGTGATAAG+TGG | 0.531815 | 8.1:+9929389 | None:intergenic |
| TTGTGATTTCCAGAATAGAC+GGG | 0.538600 | 8.1:+9926207 | None:intergenic |
| ACTGGTTTGCAGCGTAGTGA+TGG | 0.538605 | 8.1:-9925652 | MS.gene58727:CDS |
| CCATGCAAAGTTAGCACCTA+CGG | 0.540177 | 8.1:+9928231 | None:intergenic |
| CTTGTGATTTCCAGAATAGA+CGG | 0.540950 | 8.1:+9926206 | None:intergenic |
| ATGTTATCCAGTTTCGTACC+CGG | 0.545283 | 8.1:-9928185 | MS.gene58727:CDS |
| CTAACTTTGCATGGCTTGTG+CGG | 0.549145 | 8.1:-9928222 | MS.gene58727:CDS |
| TCTCAAATTAGGGAGGCAAT+GGG | 0.550755 | 8.1:-9926261 | MS.gene58727:intron |
| CATGAGACCAAGAGTGAGAC+CGG | 0.551117 | 8.1:+9929288 | None:intergenic |
| TTCCAGAATAGACGGGAACT+CGG | 0.557589 | 8.1:+9926214 | None:intergenic |
| TTACCTATTGGGGCATGATG+AGG | 0.563837 | 8.1:-9927393 | MS.gene58727:CDS |
| ATCCATGTTACGGATCCAAA+AGG | 0.564344 | 8.1:+9929361 | None:intergenic |
| TATCTACTACAAATTGCTTG+TGG | 0.565273 | 8.1:+9928262 | None:intergenic |
| TGATGGAGCTCGTGCCATTG+AGG | 0.566754 | 8.1:+9925280 | None:intergenic |
| TATCCAGTTTCGTACCCGGT+TGG | 0.568239 | 8.1:-9928181 | MS.gene58727:CDS |
| CTTGAAATTCTTGAACGTAG+TGG | 0.569217 | 8.1:-9929247 | MS.gene58727:CDS |
| TTTGATGCAAAGAAAAGTGC+TGG | 0.571142 | 8.1:-9925784 | MS.gene58727:CDS |
| TACGAGAAAACAACAGATGC+CGG | 0.571476 | 8.1:+9929330 | None:intergenic |
| GGCGTAAGCGATCCATGTTA+CGG | 0.574013 | 8.1:+9929351 | None:intergenic |
| AGTTTCGTACCCGGTTGGAA+AGG | 0.575771 | 8.1:-9928176 | MS.gene58727:intron |
| ATACTGAATGAGTTCCAAAA+GGG | 0.575998 | 8.1:-9925883 | MS.gene58727:CDS |
| AGTAGATATGGTCTCGCCGT+AGG | 0.586620 | 8.1:-9928247 | MS.gene58727:CDS |
| TCTTGTCTCTATTCATGGAA+AGG | 0.587878 | 8.1:-9927342 | MS.gene58727:CDS |
| GCTGCTGTTGTTAAGGCTAA+GGG | 0.589670 | 8.1:-9925847 | MS.gene58727:CDS |
| TCATAGAGAGGCATATCGGA+TGG | 0.590769 | 8.1:+9925907 | None:intergenic |
| TTGAATTACCTCCATAGCAA+CGG | 0.594780 | 8.1:+9929019 | None:intergenic |
| CACGAGCTCCATCAGTCCGA+AGG | 0.604615 | 8.1:-9925271 | MS.gene58727:CDS |
| TGCAGCAATCATACTTCCAG+TGG | 0.610141 | 8.1:-9929087 | MS.gene58727:intron |
| GATGACTGGCCAAAAGGGAG+CGG | 0.616432 | 8.1:-9925249 | MS.gene58727:intron |
| TATCTATCCGGAGAATTCCA+CGG | 0.622237 | 8.1:-9926019 | MS.gene58727:intron |
| TCGTGCCATTGAGGAAGCAG+CGG | 0.624349 | 8.1:+9925289 | None:intergenic |
| CAGCAAATTCACCATCGTCA+TGG | 0.625551 | 8.1:+9929447 | None:intergenic |
| TGTCTCTATTCATGGAAAGG+AGG | 0.627265 | 8.1:-9927339 | MS.gene58727:intron |
| TGAATGCTTTGACGGTGAGT+CGG | 0.638889 | 8.1:-9929426 | MS.gene58727:CDS |
| TGCAAAGAAAAGTGCTGGTG+GGG | 0.643398 | 8.1:-9925779 | MS.gene58727:CDS |
| ATGCAAAGAAAAGTGCTGGT+GGG | 0.649470 | 8.1:-9925780 | MS.gene58727:CDS |
| TAGAATATACCTTTCCAACC+GGG | 0.649877 | 8.1:+9928167 | None:intergenic |
| TCATTCAGTATATCATAGAG+AGG | 0.661497 | 8.1:+9925895 | None:intergenic |
| GTAACATGGATCGCTTACGC+CGG | 0.674939 | 8.1:-9929349 | MS.gene58727:CDS |
| ACGACGTATCACCATGACGA+TGG | 0.677281 | 8.1:-9929458 | None:intergenic |
| GATAGATACAGCGCTAACAG+GGG | 0.685244 | 8.1:+9926034 | None:intergenic |
| GATGCAAAGAAAAGTGCTGG+TGG | 0.691361 | 8.1:-9925781 | MS.gene58727:CDS |
| GATGAGACGACAATTATCAG+TGG | 0.694201 | 8.1:-9927191 | MS.gene58727:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAATAAAAAAATTG+TGG | + | chr8.1:9929094-9929113 | None:intergenic | 10.0% |
| !!! | TGTTTTTTCATTTTATAATT+AGG | - | chr8.1:9928508-9928527 | MS.gene58727:intron | 10.0% |
| !! | ATATACCATAACAAAAAATT+GGG | + | chr8.1:9928662-9928681 | None:intergenic | 15.0% |
| !! | GATAATATAAAGTTAAAACA+TGG | + | chr8.1:9928454-9928473 | None:intergenic | 15.0% |
| !! | TATATACCATAACAAAAAAT+TGG | + | chr8.1:9928663-9928682 | None:intergenic | 15.0% |
| !! | TTTAGATGTTAATTCAAAAT+TGG | - | chr8.1:9928006-9928025 | MS.gene58727:intron | 15.0% |
| !!! | GTGTGTTTTTATATATATAT+GGG | - | chr8.1:9926638-9926657 | MS.gene58727:CDS | 15.0% |
| !!! | TATATTATCTCATTACTTTT+AGG | - | chr8.1:9928465-9928484 | MS.gene58727:CDS | 15.0% |
| !!! | TGTGTGTTTTTATATATATA+TGG | - | chr8.1:9926637-9926656 | MS.gene58727:CDS | 15.0% |
| !!! | TGTGTTTTTATATATATATG+GGG | - | chr8.1:9926639-9926658 | MS.gene58727:CDS | 15.0% |
| !! | AAAGAGAAAGGAAAATTATT+AGG | - | chr8.1:9926521-9926540 | MS.gene58727:intron | 20.0% |
| !! | AAGAGAAAGGAAAATTATTA+GGG | - | chr8.1:9926522-9926541 | MS.gene58727:intron | 20.0% |
| !! | AGAAATGTAATGATTTAGAT+AGG | + | chr8.1:9925413-9925432 | None:intergenic | 20.0% |
| !! | TAATTCATAAGTTCTCAATA+AGG | + | chr8.1:9925832-9925851 | None:intergenic | 20.0% |
| !! | TATCATAATAAATGCTGATA+TGG | - | chr8.1:9929217-9929236 | MS.gene58727:intron | 20.0% |
| !! | TATTATTCATAAGTTTGTCA+AGG | - | chr8.1:9925769-9925788 | MS.gene58727:CDS | 20.0% |
| !! | TCTTGTTAATTGCATTAAAT+TGG | + | chr8.1:9926499-9926518 | None:intergenic | 20.0% |
| !! | TGAAAACAACTTATAGATTA+TGG | - | chr8.1:9925688-9925707 | MS.gene58727:CDS | 20.0% |
| !! | TGTTATGGTATATATTTACA+GGG | - | chr8.1:9928669-9928688 | MS.gene58727:intron | 20.0% |
| !! | TTAAGGAAAATAAAATAGAG+TGG | + | chr8.1:9928300-9928319 | None:intergenic | 20.0% |
| !! | TTGTTATGGTATATATTTAC+AGG | - | chr8.1:9928668-9928687 | MS.gene58727:intron | 20.0% |
| !!! | AAAATCCCAATTTTTTGTTA+TGG | - | chr8.1:9928654-9928673 | MS.gene58727:intron | 20.0% |
| !!! | AAAGAAAATGTTGATTCAAT+AGG | + | chr8.1:9927989-9928008 | None:intergenic | 20.0% |
| !!! | AACATAATTGAAGTTTTCAA+TGG | + | chr8.1:9925487-9925506 | None:intergenic | 20.0% |
| !!! | AATATTGTATTGACATGAAA+TGG | + | chr8.1:9927510-9927529 | None:intergenic | 20.0% |
| !!! | ACTCATTCTAAAAAATAAGT+GGG | - | chr8.1:9926761-9926780 | MS.gene58727:intron | 20.0% |
| !!! | GTTTAACTTTCTTGTTTTTT+AGG | - | chr8.1:9927361-9927380 | MS.gene58727:CDS | 20.0% |
| !!! | TAACTTGTTTATCTAATTTC+AGG | - | chr8.1:9926311-9926330 | MS.gene58727:intron | 20.0% |
| ! | AAAACACATGAATAAGCAAA+AGG | + | chr8.1:9927938-9927957 | None:intergenic | 25.0% |
| ! | AAAAGACTTAACAAATCAAC+TGG | + | chr8.1:9926277-9926296 | None:intergenic | 25.0% |
| ! | AAAGACTTAACAAATCAACT+GGG | + | chr8.1:9926276-9926295 | None:intergenic | 25.0% |
| ! | AAATTTATAAAAACACACCG+TGG | + | chr8.1:9928602-9928621 | None:intergenic | 25.0% |
| ! | AAGAGTTTATCTAGGTATAT+AGG | + | chr8.1:9926139-9926158 | None:intergenic | 25.0% |
| ! | AAGTTGTTAAATACACCTTA+AGG | - | chr8.1:9926722-9926741 | MS.gene58727:intron | 25.0% |
| ! | AATATGTTGACGTTCATAAA+AGG | - | chr8.1:9929177-9929196 | MS.gene58727:intron | 25.0% |
| ! | AATGAAAAAACAAACATGTG+AGG | + | chr8.1:9928500-9928519 | None:intergenic | 25.0% |
| ! | AATTATCACTATTACCTTAC+TGG | - | chr8.1:9927047-9927066 | MS.gene58727:intron | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+GGG | + | chr8.1:9926679-9926698 | None:intergenic | 25.0% |
| ! | AGGAAACTTAAATAACAAGA+TGG | + | chr8.1:9927918-9927937 | None:intergenic | 25.0% |
| ! | ATCCCTTTAGTTATATATCA+AGG | - | chr8.1:9926943-9926962 | MS.gene58727:intron | 25.0% |
| ! | ATGTTAATTCAAAATTGGAC+TGG | - | chr8.1:9928011-9928030 | MS.gene58727:intron | 25.0% |
| ! | ATTAACAAGAGAAAAGAGAA+AGG | - | chr8.1:9926509-9926528 | MS.gene58727:intron | 25.0% |
| ! | ATTGATTGAAGAGTTTATCT+AGG | + | chr8.1:9926147-9926166 | None:intergenic | 25.0% |
| ! | CGTTAGGAAAAAAAATACTT+GGG | + | chr8.1:9927166-9927185 | None:intergenic | 25.0% |
| ! | GAAATCACAAGAATGTTATT+GGG | - | chr8.1:9928407-9928426 | MS.gene58727:intron | 25.0% |
| ! | GAAGACAAAAATTTACTTGT+AGG | + | chr8.1:9929056-9929075 | None:intergenic | 25.0% |
| ! | GTTGTAATATACATTGATGA+TGG | - | chr8.1:9927583-9927602 | MS.gene58727:intron | 25.0% |
| ! | TAAAAATAAGCCAATCCAAA+CGG | - | chr8.1:9925895-9925914 | MS.gene58727:CDS | 25.0% |
| ! | TCATGAGAATGTATTACTAA+TGG | + | chr8.1:9927800-9927819 | None:intergenic | 25.0% |
| ! | TCGTTAGGAAAAAAAATACT+TGG | + | chr8.1:9927167-9927186 | None:intergenic | 25.0% |
| ! | TTCTCTTCATCAATTATTTG+TGG | + | chr8.1:9928796-9928815 | None:intergenic | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | + | chr8.1:9926826-9926845 | None:intergenic | 25.0% |
| !! | AGAAAAAGATTGATTTCACT+TGG | + | chr8.1:9929438-9929457 | None:intergenic | 25.0% |
| !! | CACTCATTCTAAAAAATAAG+TGG | - | chr8.1:9926760-9926779 | MS.gene58727:intron | 25.0% |
| !! | GAAAAAGATTGATTTCACTT+GGG | + | chr8.1:9929437-9929456 | None:intergenic | 25.0% |
| !! | TTCACCATCTTCAAAATTTT+CGG | + | chr8.1:9928992-9929011 | None:intergenic | 25.0% |
| !! | TTTAACTAGTTTGTGCTATT+CGG | - | chr8.1:9927651-9927670 | MS.gene58727:intron | 25.0% |
| !! | TTTTCAACTATACCATTTAC+TGG | - | chr8.1:9928172-9928191 | MS.gene58727:intron | 25.0% |
| !!! | GTTACTTTTGTTCTCTTTTT+CGG | - | chr8.1:9926187-9926206 | MS.gene58727:CDS | 25.0% |
| !!! | TCTACTCAACTATTTTGTTT+AGG | - | chr8.1:9927322-9927341 | MS.gene58727:intron | 25.0% |
| AAAAATAAGCCAATCCAAAC+GGG | - | chr8.1:9925896-9925915 | MS.gene58727:CDS | 30.0% | |
| AAGACTTAACAAATCAACTG+GGG | + | chr8.1:9926275-9926294 | None:intergenic | 30.0% | |
| AAGTAGTTAAATACACCCTA+AGG | - | chr8.1:9926868-9926887 | MS.gene58727:intron | 30.0% | |
| AATTTGAAAAGTCGTTATGC+TGG | - | chr8.1:9926581-9926600 | MS.gene58727:intron | 30.0% | |
| AGGAAATAGAATAGAGAACT+GGG | - | chr8.1:9927699-9927718 | MS.gene58727:intron | 30.0% | |
| AGGCCTTGATATATAACTAA+AGG | + | chr8.1:9926949-9926968 | None:intergenic | 30.0% | |
| AGTGATTGGTATTATCACTT+TGG | - | chr8.1:9929011-9929030 | MS.gene58727:intron | 30.0% | |
| ATACTGAATGAGTTCCAAAA+GGG | - | chr8.1:9928718-9928737 | MS.gene58727:intron | 30.0% | |
| ATTCAGTTCAATTTAACGTG+CGG | + | chr8.1:9929116-9929135 | None:intergenic | 30.0% | |
| CAAACTAGTTAAATGTTTCC+AGG | + | chr8.1:9927644-9927663 | None:intergenic | 30.0% | |
| CAACAATAAACATTTCCACA+TGG | + | chr8.1:9928199-9928218 | None:intergenic | 30.0% | |
| CAAGCAATTTGTAGTAGATA+TGG | - | chr8.1:9926342-9926361 | MS.gene58727:intron | 30.0% | |
| CACACCTTAATAAAAACTAG+TGG | + | chr8.1:9926680-9926699 | None:intergenic | 30.0% | |
| CGTTATTAACTATATCATGC+TGG | - | chr8.1:9927848-9927867 | MS.gene58727:intron | 30.0% | |
| GGAAATCACAAGAATGTTAT+TGG | - | chr8.1:9928406-9928425 | MS.gene58727:intron | 30.0% | |
| GGCCTTGATATATAACTAAA+GGG | + | chr8.1:9926948-9926967 | None:intergenic | 30.0% | |
| TAGGAAATAGAATAGAGAAC+TGG | - | chr8.1:9927698-9927717 | MS.gene58727:intron | 30.0% | |
| TATACTGAATGAGTTCCAAA+AGG | - | chr8.1:9928717-9928736 | MS.gene58727:intron | 30.0% | |
| TATCTACTACAAATTGCTTG+TGG | + | chr8.1:9926342-9926361 | None:intergenic | 30.0% | |
| TCATTCAGTATATCATAGAG+AGG | + | chr8.1:9928709-9928728 | None:intergenic | 30.0% | |
| TGTATATTACAACTCAACAC+AGG | + | chr8.1:9927576-9927595 | None:intergenic | 30.0% | |
| TTATAGATTATGGTACCGTT+TGG | - | chr8.1:9925698-9925717 | MS.gene58727:CDS | 30.0% | |
| ! | AGCATAACGACTTTTCAAAT+TGG | + | chr8.1:9926582-9926601 | None:intergenic | 30.0% |
| ! | ATATAGATCCTACTAGTTTG+TGG | + | chr8.1:9928226-9928245 | None:intergenic | 30.0% |
| ! | ATATATATATGGGGTTTGCT+AGG | - | chr8.1:9926648-9926667 | MS.gene58727:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | + | chr8.1:9926827-9926846 | None:intergenic | 30.0% |
| ! | CACATTCTTTTAAACTAGAC+AGG | + | chr8.1:9927007-9927026 | None:intergenic | 30.0% |
| ! | GCAGGATAATAGAAGTTTTA+AGG | + | chr8.1:9928317-9928336 | None:intergenic | 30.0% |
| ! | TATAGATCCTACTAGTTTGT+GGG | + | chr8.1:9928225-9928244 | None:intergenic | 30.0% |
| ! | TATATCATAGAGAGGCATAT+CGG | + | chr8.1:9928701-9928720 | None:intergenic | 30.0% |
| ! | TCCACAAAACAGCTTTTAAA+AGG | + | chr8.1:9926969-9926988 | None:intergenic | 30.0% |
| ! | TTAACTAGTTTGTGCTATTC+GGG | - | chr8.1:9927652-9927671 | MS.gene58727:intron | 30.0% |
| ! | TTTGAAATTGACTCTTCTCT+TGG | - | chr8.1:9928100-9928119 | MS.gene58727:intron | 30.0% |
| ! | TTTTAGCAACATTCACCTTA+AGG | + | chr8.1:9926740-9926759 | None:intergenic | 30.0% |
| ! | TTTTCAAATTGGTGTGTCAT+TGG | + | chr8.1:9926571-9926590 | None:intergenic | 30.0% |
| !! | AGGATCTATATTAGCTTTCA+AGG | - | chr8.1:9928235-9928254 | MS.gene58727:CDS | 30.0% |
| !! | ATTTTTATTTAAGGCCCGTT+TGG | + | chr8.1:9925913-9925932 | None:intergenic | 30.0% |
| !! | GTAATATACATTGATGATGG+TGG | - | chr8.1:9927586-9927605 | MS.gene58727:intron | 30.0% |
| !!! | AACTTTCTTGTTTTTTAGGC+TGG | - | chr8.1:9927365-9927384 | MS.gene58727:CDS | 30.0% |
| !!! | ACACCCACTAGTTTTTATTA+AGG | - | chr8.1:9926673-9926692 | MS.gene58727:intron | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | - | chr8.1:9926820-9926839 | MS.gene58727:intron | 30.0% |
| !!! | ACTTTCTTGTTTTTTAGGCT+GGG | - | chr8.1:9927366-9927385 | MS.gene58727:CDS | 30.0% |
| !!! | TGATGTTGTTTTTTAACCAC+TGG | + | chr8.1:9925533-9925552 | None:intergenic | 30.0% |
| AAAAACCATTTATGCTCCCA+GGG | + | chr8.1:9927126-9927145 | None:intergenic | 35.0% | |
| AAAACAAAGTCAGTCCCTTA+TGG | + | chr8.1:9928083-9928102 | None:intergenic | 35.0% | |
| AAACAAAGTCAGTCCCTTAT+GGG | + | chr8.1:9928082-9928101 | None:intergenic | 35.0% | |
| AAAGCTCTTGTCTCTATTCA+TGG | - | chr8.1:9927254-9927273 | MS.gene58727:intron | 35.0% | |
| ACAAGTCAATCCAAACCAAA+CGG | + | chr8.1:9925716-9925735 | None:intergenic | 35.0% | |
| ACCTGGAACAAATATTCGTT+AGG | + | chr8.1:9927182-9927201 | None:intergenic | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | - | chr8.1:9926907-9926926 | MS.gene58727:intron | 35.0% | |
| ATCCTGCCAATCTCAAATTA+GGG | - | chr8.1:9928330-9928349 | MS.gene58727:intron | 35.0% | |
| ATTGGAAGTTTGAAAGCCAA+CGG | + | chr8.1:9926104-9926123 | None:intergenic | 35.0% | |
| CAAATAGGTTGCATTGAATG+TGG | + | chr8.1:9927479-9927498 | None:intergenic | 35.0% | |
| CACTACGTTCAAGAATTTCA+AGG | + | chr8.1:9925356-9925375 | None:intergenic | 35.0% | |
| CTTGAAATTCTTGAACGTAG+TGG | - | chr8.1:9925354-9925373 | MS.gene58727:intron | 35.0% | |
| CTTGTGATTTCCAGAATAGA+CGG | + | chr8.1:9928398-9928417 | None:intergenic | 35.0% | |
| GAAATGGAACACTGACAAAT+AGG | + | chr8.1:9927494-9927513 | None:intergenic | 35.0% | |
| GGAAATAGAATAGAGAACTG+GGG | - | chr8.1:9927700-9927719 | MS.gene58727:intron | 35.0% | |
| GTAGAATATACCTTTCCAAC+CGG | + | chr8.1:9926438-9926457 | None:intergenic | 35.0% | |
| GTATTCTAGCAAATGCCTAT+AGG | + | chr8.1:9926802-9926821 | None:intergenic | 35.0% | |
| GTTGTTCCATGACATTCTTT+CGG | - | chr8.1:9926470-9926489 | MS.gene58727:intron | 35.0% | |
| TAGAATATACCTTTCCAACC+GGG | + | chr8.1:9926437-9926456 | None:intergenic | 35.0% | |
| TATAAGTAGAAAGTGAGTGC+TGG | + | chr8.1:9927764-9927783 | None:intergenic | 35.0% | |
| TATCCTGCCAATCTCAAATT+AGG | - | chr8.1:9928329-9928348 | MS.gene58727:intron | 35.0% | |
| TCCTAACGAATATTTGTTCC+AGG | - | chr8.1:9927178-9927197 | MS.gene58727:CDS | 35.0% | |
| TCTTGTCTCTATTCATGGAA+AGG | - | chr8.1:9927259-9927278 | MS.gene58727:intron | 35.0% | |
| TGGAAATTAGAAACATGCGA+AGG | - | chr8.1:9927606-9927625 | MS.gene58727:intron | 35.0% | |
| TGTATGTTAGCAACTCCTAT+AGG | - | chr8.1:9926784-9926803 | MS.gene58727:intron | 35.0% | |
| TTGAATTACCTCCATAGCAA+CGG | + | chr8.1:9925585-9925604 | None:intergenic | 35.0% | |
| TTGTGATTTCCAGAATAGAC+GGG | + | chr8.1:9928397-9928416 | None:intergenic | 35.0% | |
| TTTGAAGATGGTGAAGTGAT+TGG | - | chr8.1:9928997-9929016 | MS.gene58727:intron | 35.0% | |
| ! | ACCAGTTTGCTTATTGATGA+TGG | + | chr8.1:9928935-9928954 | None:intergenic | 35.0% |
| ! | AGCTTTTGTCTCCATTTCTT+AGG | + | chr8.1:9927092-9927111 | None:intergenic | 35.0% |
| ! | AGTTTGTTTGAAAGACTGAC+AGG | + | chr8.1:9928630-9928649 | None:intergenic | 35.0% |
| ! | ATTGTGGGATGCACATATTT+TGG | + | chr8.1:9929078-9929097 | None:intergenic | 35.0% |
| ! | CCAGTTTGCTTATTGATGAT+GGG | + | chr8.1:9928934-9928953 | None:intergenic | 35.0% |
| ! | CCATCTTCAAAATTTTCGGA+AGG | + | chr8.1:9928988-9929007 | None:intergenic | 35.0% |
| ! | CGAATATTTGTTCCAGGTTT+TGG | - | chr8.1:9927184-9927203 | MS.gene58727:CDS | 35.0% |
| ! | TAACTAGTTTGTGCTATTCG+GGG | - | chr8.1:9927653-9927672 | MS.gene58727:intron | 35.0% |
| ! | TATGCTGGCTAATGATATGA+TGG | - | chr8.1:9926596-9926615 | MS.gene58727:CDS | 35.0% |
| ! | TTTGATGCAAAGAAAAGTGC+TGG | - | chr8.1:9928817-9928836 | MS.gene58727:intron | 35.0% |
| ! | TTTTAGCAAGCTACACCTTA+GGG | + | chr8.1:9926886-9926905 | None:intergenic | 35.0% |
| !! | CCTTCCGAAAATTTTGAAGA+TGG | - | chr8.1:9928985-9929004 | MS.gene58727:intron | 35.0% |
| !! | GAATTTGCTGAATGCTTTGA+CGG | - | chr8.1:9925167-9925186 | MS.gene58727:CDS | 35.0% |
| !! | GCCTTTTAAAAGCTGTTTTG+TGG | - | chr8.1:9926965-9926984 | MS.gene58727:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr8.1:9926913-9926932 | None:intergenic | 35.0% |
| !!! | AGGTTTTGGATTACCTATTG+GGG | - | chr8.1:9927198-9927217 | MS.gene58727:CDS | 35.0% |
| !!! | CAGGTTTTGGATTACCTATT+GGG | - | chr8.1:9927197-9927216 | MS.gene58727:CDS | 35.0% |
| !!! | TTTTGTTCTCTTTTTCGGTG+AGG | - | chr8.1:9926192-9926211 | MS.gene58727:CDS | 35.0% |
| AAAACCATTTATGCTCCCAG+GGG | + | chr8.1:9927125-9927144 | None:intergenic | 40.0% | |
| ATACCATTTACTGGACCATG+TGG | - | chr8.1:9928181-9928200 | MS.gene58727:CDS | 40.0% | |
| ATCCATGTTACGGATCCAAA+AGG | + | chr8.1:9925243-9925262 | None:intergenic | 40.0% | |
| ATCTCAAATTAGGGAGGCAA+TGG | - | chr8.1:9928339-9928358 | MS.gene58727:intron | 40.0% | |
| ATGGGAAAAATTCTTGCTCG+TGG | - | chr8.1:9928358-9928377 | MS.gene58727:intron | 40.0% | |
| ATGGTCAGTCTCCTAAGAAA+TGG | - | chr8.1:9927078-9927097 | MS.gene58727:intron | 40.0% | |
| ATGTTATCCAGTTTCGTACC+CGG | - | chr8.1:9926416-9926435 | MS.gene58727:intron | 40.0% | |
| ATTTCTTAGGAGACTGACCA+TGG | + | chr8.1:9927079-9927098 | None:intergenic | 40.0% | |
| CAAAAACCATTTATGCTCCC+AGG | + | chr8.1:9927127-9927146 | None:intergenic | 40.0% | |
| CAAAAAGTTAGGCAGGGTTT+AGG | + | chr8.1:9926077-9926096 | None:intergenic | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | chr8.1:9926906-9926925 | MS.gene58727:intron | 40.0% | |
| CACTTATCACTCGCTAATGA+AGG | - | chr8.1:9925213-9925232 | MS.gene58727:intron | 40.0% | |
| CCAATAGGTAATCCAAAACC+TGG | + | chr8.1:9927199-9927218 | None:intergenic | 40.0% | |
| CCCATCATCAATAAGCAAAC+TGG | - | chr8.1:9928931-9928950 | MS.gene58727:intron | 40.0% | |
| CTGAATTGCTTCTTGAATGC+AGG | - | chr8.1:9929130-9929149 | MS.gene58727:intron | 40.0% | |
| CTTCAGTATGTTGCCCATAA+GGG | - | chr8.1:9928066-9928085 | MS.gene58727:intron | 40.0% | |
| CTTCATTAGCGAGTGATAAG+TGG | + | chr8.1:9925215-9925234 | None:intergenic | 40.0% | |
| CTTTCAAACTTCCAATCTGC+AGG | - | chr8.1:9926108-9926127 | MS.gene58727:intron | 40.0% | |
| GATGAGACGACAATTATCAG+TGG | - | chr8.1:9927410-9927429 | MS.gene58727:intron | 40.0% | |
| GATTATGGTACCGTTTGGTT+TGG | - | chr8.1:9925703-9925722 | MS.gene58727:CDS | 40.0% | |
| GTTGTTAAGGCTAAGGGAAA+AGG | - | chr8.1:9928760-9928779 | MS.gene58727:intron | 40.0% | |
| TACGAGAAAACAACAGATGC+CGG | + | chr8.1:9925274-9925293 | None:intergenic | 40.0% | |
| TACTCCATTGCTACAAAAGC+AGG | - | chr8.1:9928858-9928877 | MS.gene58727:intron | 40.0% | |
| TAGGTTGCATTGAATGTGGA+CGG | + | chr8.1:9927475-9927494 | None:intergenic | 40.0% | |
| TATCTATCCGGAGAATTCCA+CGG | - | chr8.1:9928582-9928601 | MS.gene58727:intron | 40.0% | |
| TCATATGGCTGCTGTTGTTA+AGG | - | chr8.1:9928747-9928766 | MS.gene58727:intron | 40.0% | |
| TCTCAAATTAGGGAGGCAAT+GGG | - | chr8.1:9928340-9928359 | MS.gene58727:intron | 40.0% | |
| TCTTCAGTATGTTGCCCATA+AGG | - | chr8.1:9928065-9928084 | MS.gene58727:intron | 40.0% | |
| TGGGAAAAATTCTTGCTCGT+GGG | - | chr8.1:9928359-9928378 | MS.gene58727:intron | 40.0% | |
| TGGTTACCGAAAGAATGTCA+TGG | + | chr8.1:9926479-9926498 | None:intergenic | 40.0% | |
| TGTCTCTATTCATGGAAAGG+AGG | - | chr8.1:9927262-9927281 | MS.gene58727:intron | 40.0% | |
| TTTCCACATGGTCCAGTAAA+TGG | + | chr8.1:9928187-9928206 | None:intergenic | 40.0% | |
| ! | CACCTTTTCGGTCAAATCAA+GGG | + | chr8.1:9927438-9927457 | None:intergenic | 40.0% |
| ! | CCTTCTGAGAAAAAACAAGC+CGG | - | chr8.1:9925381-9925400 | MS.gene58727:intron | 40.0% |
| ! | TACCTTTTGGATCCGTAACA+TGG | - | chr8.1:9925238-9925257 | MS.gene58727:intron | 40.0% |
| ! | TATTTAAGGCCCGTTTGGAT+TGG | + | chr8.1:9925908-9925927 | None:intergenic | 40.0% |
| ! | TCACCTTTTCGGTCAAATCA+AGG | + | chr8.1:9927439-9927458 | None:intergenic | 40.0% |
| ! | TGTTTTCTCGTATGCTTTGC+TGG | - | chr8.1:9925282-9925301 | MS.gene58727:CDS | 40.0% |
| ! | TTGCCTCCCTAATTTGAGAT+TGG | + | chr8.1:9928339-9928358 | None:intergenic | 40.0% |
| !! | AAGTGAGTGCTGGAATAACT+TGG | + | chr8.1:9927754-9927773 | None:intergenic | 40.0% |
| !! | ACATCCTGCTTTTGTAGCAA+TGG | + | chr8.1:9928865-9928884 | None:intergenic | 40.0% |
| !! | ATGCAAAGAAAAGTGCTGGT+GGG | - | chr8.1:9928821-9928840 | MS.gene58727:intron | 40.0% |
| !! | ATGGCTTGTGCGGATTTTAA+TGG | - | chr8.1:9926389-9926408 | MS.gene58727:intron | 40.0% |
| !! | CGAAGGTTGCTTTATTTACC+TGG | - | chr8.1:9927623-9927642 | MS.gene58727:intron | 40.0% |
| !! | GCTAATGAAGGCATACCTTT+TGG | - | chr8.1:9925225-9925244 | MS.gene58727:intron | 40.0% |
| !! | GTTTTAGCAAGCTACACCTT+AGG | + | chr8.1:9926887-9926906 | None:intergenic | 40.0% |
| !! | TGATTTAGATAGGTACCGAC+CGG | + | chr8.1:9925403-9925422 | None:intergenic | 40.0% |
| !! | TTGATGATGGGAAGCTTTGA+AGG | + | chr8.1:9928922-9928941 | None:intergenic | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr8.1:9926914-9926933 | None:intergenic | 40.0% |
| !!! | CCAGGTTTTGGATTACCTAT+TGG | - | chr8.1:9927196-9927215 | MS.gene58727:CDS | 40.0% |
| !!! | CTTGTTTTTTAGGCTGGGAA+AGG | - | chr8.1:9927371-9927390 | MS.gene58727:CDS | 40.0% |
| AAACACACCGTGGAATTCTC+CGG | + | chr8.1:9928592-9928611 | None:intergenic | 45.0% | |
| CCAAAAGGGAAGCAGTCATA+TGG | - | chr8.1:9928732-9928751 | MS.gene58727:intron | 45.0% | |
| CCAACGGCTGTCAAAAAGTT+AGG | + | chr8.1:9926088-9926107 | None:intergenic | 45.0% | |
| CCATGCAAAGTTAGCACCTA+CGG | + | chr8.1:9926373-9926392 | None:intergenic | 45.0% | |
| CTGAGAAAAAACAAGCCGGT+CGG | - | chr8.1:9925385-9925404 | MS.gene58727:intron | 45.0% | |
| CTGCCAATCTCAAATTAGGG+AGG | - | chr8.1:9928333-9928352 | MS.gene58727:intron | 45.0% | |
| CTGTTAGCGCTGTATCTATC+CGG | - | chr8.1:9928570-9928589 | MS.gene58727:intron | 45.0% | |
| GATAGATACAGCGCTAACAG+GGG | + | chr8.1:9928570-9928589 | None:intergenic | 45.0% | |
| GCTGCTGTTGTTAAGGCTAA+GGG | - | chr8.1:9928754-9928773 | MS.gene58727:intron | 45.0% | |
| GGATAGATACAGCGCTAACA+GGG | + | chr8.1:9928571-9928590 | None:intergenic | 45.0% | |
| GGCTGTCAAAAAGTTAGGCA+GGG | + | chr8.1:9926083-9926102 | None:intergenic | 45.0% | |
| GTTGCTTCCCACAAACTAGT+AGG | - | chr8.1:9928215-9928234 | MS.gene58727:CDS | 45.0% | |
| TATAGGAAGAGCCTGCAGAT+TGG | + | chr8.1:9926122-9926141 | None:intergenic | 45.0% | |
| TCTCTGTAATGCCGTTGCTA+TGG | - | chr8.1:9925571-9925590 | MS.gene58727:CDS | 45.0% | |
| TGAATGCTTTGACGGTGAGT+CGG | - | chr8.1:9925175-9925194 | MS.gene58727:intron | 45.0% | |
| TGCAGCAATCATACTTCCAG+TGG | - | chr8.1:9925514-9925533 | MS.gene58727:intron | 45.0% | |
| TGCTTTGCTGGTATCATGTC+CGG | - | chr8.1:9925294-9925313 | MS.gene58727:CDS | 45.0% | |
| TTACCTATTGGGGCATGATG+AGG | - | chr8.1:9927208-9927227 | MS.gene58727:CDS | 45.0% | |
| TTCCAGAATAGACGGGAACT+CGG | + | chr8.1:9928390-9928409 | None:intergenic | 45.0% | |
| ! | AGCCCTTGATTTGACCGAAA+AGG | - | chr8.1:9927433-9927452 | MS.gene58727:intron | 45.0% |
| ! | AGTGCTGGAATAACTTGGTG+TGG | + | chr8.1:9927749-9927768 | None:intergenic | 45.0% |
| ! | CAGTTTCAGGTCGTACAGTA+AGG | + | chr8.1:9928544-9928563 | None:intergenic | 45.0% |
| ! | CCATATGACTGCTTCCCTTT+TGG | + | chr8.1:9928735-9928754 | None:intergenic | 45.0% |
| ! | CCTAACTTTTTGACAGCCGT+TGG | - | chr8.1:9926085-9926104 | MS.gene58727:intron | 45.0% |
| ! | CTAACTTTGCATGGCTTGTG+CGG | - | chr8.1:9926379-9926398 | MS.gene58727:intron | 45.0% |
| ! | CTCCCTAATTTGAGATTGGC+AGG | + | chr8.1:9928335-9928354 | None:intergenic | 45.0% |
| ! | TACCTTACTGGCTGAAACCA+TGG | - | chr8.1:9927059-9927078 | MS.gene58727:intron | 45.0% |
| ! | TCATAGAGAGGCATATCGGA+TGG | + | chr8.1:9928697-9928716 | None:intergenic | 45.0% |
| !! | GATGCAAAGAAAAGTGCTGG+TGG | - | chr8.1:9928820-9928839 | MS.gene58727:intron | 45.0% |
| !! | GGCATGATGAGGCTTTATTC+AGG | - | chr8.1:9927219-9927238 | MS.gene58727:CDS | 45.0% |
| !! | TGCAAAGAAAAGTGCTGGTG+GGG | - | chr8.1:9928822-9928841 | MS.gene58727:intron | 45.0% |
| !! | TGTTTTTGAGCAGACTGCTG+AGG | - | chr8.1:9927952-9927971 | MS.gene58727:intron | 45.0% |
| !!! | CCGGCTTGTTTTTTCTCAGA+AGG | + | chr8.1:9925384-9925403 | None:intergenic | 45.0% |
| !!! | GTTTTTTAGGCTGGGAAAGG+AGG | - | chr8.1:9927374-9927393 | MS.gene58727:CDS | 45.0% |
| !! | AAAAAAAATAAAAAAATTGT+GGG | + | chr8.1:9929093-9929112 | None:intergenic | 5.0% |
| !!! | AATCAAATTATTTTTATTTA+AGG | + | chr8.1:9925922-9925941 | None:intergenic | 5.0% |
| AAAGCTCTATGCTCTTCCCC+TGG | - | chr8.1:9927106-9927125 | MS.gene58727:intron | 50.0% | |
| AAGCCTCATCATGCCCCAAT+AGG | + | chr8.1:9927214-9927233 | None:intergenic | 50.0% | |
| AAGCTCTATGCTCTTCCCCT+GGG | - | chr8.1:9927107-9927126 | MS.gene58727:intron | 50.0% | |
| AGTAGATATGGTCTCGCCGT+AGG | - | chr8.1:9926354-9926373 | MS.gene58727:intron | 50.0% | |
| AGTTTCGTACCCGGTTGGAA+AGG | - | chr8.1:9926425-9926444 | MS.gene58727:intron | 50.0% | |
| ATCATGTCCGGTCTCACTCT+TGG | - | chr8.1:9925306-9925325 | MS.gene58727:CDS | 50.0% | |
| CATGAGACCAAGAGTGAGAC+CGG | + | chr8.1:9925316-9925335 | None:intergenic | 50.0% | |
| CCGTAGGTGCTAACTTTGCA+TGG | - | chr8.1:9926370-9926389 | MS.gene58727:intron | 50.0% | |
| CGGATAGATACAGCGCTAAC+AGG | + | chr8.1:9928572-9928591 | None:intergenic | 50.0% | |
| CGGCTGTCAAAAAGTTAGGC+AGG | + | chr8.1:9926084-9926103 | None:intergenic | 50.0% | |
| CTAACAGGGGTCTCAGTTTC+AGG | + | chr8.1:9928557-9928576 | None:intergenic | 50.0% | |
| CTGTAATGCCGTTGCTATGG+AGG | - | chr8.1:9925574-9925593 | MS.gene58727:CDS | 50.0% | |
| GACCATGGTTTCAGCCAGTA+AGG | + | chr8.1:9927064-9927083 | None:intergenic | 50.0% | |
| GGCGTAAGCGATCCATGTTA+CGG | + | chr8.1:9925253-9925272 | None:intergenic | 50.0% | |
| GGCTGCTGTTGTTAAGGCTA+AGG | - | chr8.1:9928753-9928772 | MS.gene58727:intron | 50.0% | |
| GTAACATGGATCGCTTACGC+CGG | - | chr8.1:9925252-9925271 | MS.gene58727:CDS | 50.0% | |
| TATCCAGTTTCGTACCCGGT+TGG | - | chr8.1:9926420-9926439 | MS.gene58727:intron | 50.0% | |
| TTTCCAACCGGGTACGAAAC+TGG | + | chr8.1:9926426-9926445 | None:intergenic | 50.0% | |
| ! | AACCACTTACCGCTCCCTTT+TGG | + | chr8.1:9929364-9929383 | None:intergenic | 50.0% |
| ! | ACCTGCAGCACTCACCTTTT+CGG | + | chr8.1:9927450-9927469 | None:intergenic | 50.0% |
| ! | CCTTTTGGCCAGTCATCCTT+CGG | + | chr8.1:9929349-9929368 | None:intergenic | 50.0% |
| ! | CGAAGGATGACTGGCCAAAA+GGG | - | chr8.1:9929347-9929366 | MS.gene58727:CDS | 50.0% |
| ! | TCTTCCCCTGGGAGCATAAA+TGG | - | chr8.1:9927118-9927137 | MS.gene58727:intron | 50.0% |
| ! | TTGTGCTATTCGGGGACACT+GGG | - | chr8.1:9927661-9927680 | MS.gene58727:intron | 50.0% |
| ! | TTTGTGCTATTCGGGGACAC+TGG | - | chr8.1:9927660-9927679 | MS.gene58727:intron | 50.0% |
| ! | TTTTGAGCAGACTGCTGAGG+AGG | - | chr8.1:9927955-9927974 | MS.gene58727:intron | 50.0% |
| !! | ACTGGTTTGCAGCGTAGTGA+TGG | - | chr8.1:9928949-9928968 | MS.gene58727:intron | 50.0% |
| !! | CTGGGAAGCATCAATGGTGT+AGG | - | chr8.1:9927679-9927698 | MS.gene58727:intron | 50.0% |
| AGCCGAGTTCCCGTCTATTC+TGG | - | chr8.1:9928385-9928404 | MS.gene58727:intron | 55.0% | |
| CCAGTCATCCTTCGGACTGA+TGG | + | chr8.1:9929341-9929360 | None:intergenic | 55.0% | |
| CCATCAGTCCGAAGGATGAC+TGG | - | chr8.1:9929338-9929357 | MS.gene58727:CDS | 55.0% | |
| ! | ACCGAAAAGGTGAGTGCTGC+AGG | - | chr8.1:9927446-9927465 | MS.gene58727:intron | 55.0% |
| ! | CCGAAGGATGACTGGCCAAA+AGG | - | chr8.1:9929346-9929365 | MS.gene58727:CDS | 55.0% |
| ! | GATGACTGGCCAAAAGGGAG+CGG | - | chr8.1:9929352-9929371 | MS.gene58727:CDS | 55.0% |
| ! | TCGTGCCATTGAGGAAGCAG+CGG | + | chr8.1:9929315-9929334 | None:intergenic | 55.0% |
| ! | TGATGGAGCTCGTGCCATTG+AGG | + | chr8.1:9929324-9929343 | None:intergenic | 55.0% |
| !! | GGGACACTGGGAAGCATCAA+TGG | - | chr8.1:9927673-9927692 | MS.gene58727:intron | 55.0% |
| AGCTGCCGCTGCTTCCTCAA+TGG | - | chr8.1:9929307-9929326 | MS.gene58727:CDS | 60.0% | |
| CACGAGCTCCATCAGTCCGA+AGG | - | chr8.1:9929330-9929349 | MS.gene58727:CDS | 60.0% | |
| GGCCAAAAGGGAGCGGTAAG+TGG | - | chr8.1:9929359-9929378 | MS.gene58727:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 9925156 | 9929467 | 9925156 | ID=MS.gene58727 |
| chr8.1 | mRNA | 9925156 | 9929467 | 9925156 | ID=MS.gene58727.t1;Parent=MS.gene58727 |
| chr8.1 | exon | 9929221 | 9929467 | 9929221 | ID=MS.gene58727.t1.exon1;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9929221 | 9929467 | 9929221 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9929028 | 9929104 | 9929028 | ID=MS.gene58727.t1.exon2;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9929028 | 9929104 | 9929028 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9928410 | 9928493 | 9928410 | ID=MS.gene58727.t1.exon3;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9928410 | 9928493 | 9928410 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9928177 | 9928290 | 9928177 | ID=MS.gene58727.t1.exon4;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9928177 | 9928290 | 9928177 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9927340 | 9927423 | 9927340 | ID=MS.gene58727.t1.exon5;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9927340 | 9927423 | 9927340 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9927169 | 9927240 | 9927169 | ID=MS.gene58727.t1.exon6;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9927169 | 9927240 | 9927169 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9926591 | 9926658 | 9926591 | ID=MS.gene58727.t1.exon7;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9926591 | 9926658 | 9926591 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9926185 | 9926272 | 9926185 | ID=MS.gene58727.t1.exon8;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9926185 | 9926272 | 9926185 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9926020 | 9926093 | 9926020 | ID=MS.gene58727.t1.exon9;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9926020 | 9926093 | 9926020 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9925564 | 9925933 | 9925564 | ID=MS.gene58727.t1.exon10;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9925564 | 9925933 | 9925564 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9925425 | 9925471 | 9925425 | ID=MS.gene58727.t1.exon11;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9925425 | 9925471 | 9925425 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9925250 | 9925331 | 9925250 | ID=MS.gene58727.t1.exon12;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9925250 | 9925331 | 9925250 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| chr8.1 | exon | 9925156 | 9925191 | 9925156 | ID=MS.gene58727.t1.exon13;Parent=MS.gene58727.t1 |
| chr8.1 | CDS | 9925156 | 9925191 | 9925156 | ID=cds.MS.gene58727.t1;Parent=MS.gene58727.t1 |
| Gene Sequence |
| Protein sequence |
