AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054222


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054222.t1 MTR_6g045467 91.962 423 18 2 1 423 1 407 0.0 775
MS.gene054222.t1 MTR_6g045467 91.962 423 18 2 1 423 1 407 0.0 774
MS.gene054222.t1 MTR_6g045467 92.180 422 17 2 1 422 1 406 0.0 774
MS.gene054222.t1 MTR_4g117360 85.480 427 58 1 1 423 1 427 0.0 739
MS.gene054222.t1 MTR_7g010900 68.310 426 126 2 1 422 1 421 0.0 583
MS.gene054222.t1 MTR_6g045467 90.654 321 14 2 103 423 1 305 0.0 578
MS.gene054222.t1 MTR_6g045467 90.062 322 16 2 102 423 3 308 0.0 577
MS.gene054222.t1 MTR_6g045467 90.062 322 16 2 102 423 3 308 0.0 577
MS.gene054222.t1 MTR_7g094620 63.373 415 134 6 22 423 26 435 2.72e-176 503
MS.gene054222.t1 MTR_4g092610 54.863 401 161 4 37 423 18 412 1.17e-146 425
MS.gene054222.t1 MTR_2g010520 53.117 401 172 4 37 423 18 416 8.42e-135 395
MS.gene054222.t1 MTR_2g010520 63.265 294 107 1 37 329 18 311 3.70e-133 387
MS.gene054222.t1 MTR_3g111830 44.749 438 208 7 27 441 9 435 3.83e-120 360
MS.gene054222.t1 MTR_6g052300 44.131 426 209 7 27 436 15 427 9.62e-113 340
MS.gene054222.t1 MTR_6g051860 51.667 300 143 2 27 325 77 375 1.73e-107 325
MS.gene054222.t1 MTR_2g010520 63.223 242 88 1 37 277 18 259 5.18e-105 313
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054222.t1 AT4G14240 73.580 405 94 4 22 423 26 420 0.0 580
MS.gene054222.t1 AT4G14230 69.458 406 119 1 18 423 21 421 0.0 562
MS.gene054222.t1 AT4G14240 72.099 405 91 5 22 423 26 411 0.0 557
MS.gene054222.t1 AT1G03270 68.116 414 125 3 13 422 15 425 0.0 541
MS.gene054222.t1 AT4G14240 71.779 326 79 4 101 423 1 316 2.08e-155 446
MS.gene054222.t1 AT4G33700 52.927 410 172 5 28 423 9 411 2.24e-138 404
MS.gene054222.t1 AT2G14520 51.889 397 185 4 30 423 11 404 6.46e-135 395
MS.gene054222.t1 AT5G52790 48.630 438 187 8 24 455 6 411 5.43e-133 390
MS.gene054222.t1 AT2G14520 51.117 403 185 5 30 423 11 410 5.71e-133 390
MS.gene054222.t1 AT2G14520 51.117 403 185 5 30 423 11 410 5.71e-133 390
MS.gene054222.t1 AT5G52790 50.873 401 169 5 24 422 6 380 5.79e-132 387
MS.gene054222.t1 AT5G52790 50.873 401 169 5 24 422 6 380 5.79e-132 387
MS.gene054222.t1 AT5G52790 50.000 416 178 6 24 435 6 395 2.23e-131 389
MS.gene054222.t1 AT5G52790 50.746 402 170 5 24 423 6 381 6.77e-131 386
MS.gene054222.t1 AT1G47330 46.292 445 210 6 24 441 5 447 2.08e-125 375
MS.gene054222.t1 AT4G33700 61.538 273 104 1 28 299 9 281 2.80e-118 348
MS.gene054222.t1 AT4G33700 50.149 335 146 5 103 423 1 328 1.29e-101 307
MS.gene054222.t1 AT2G14520 48.788 330 157 5 103 423 1 327 1.80e-98 299
MS.gene054222.t1 AT1G47330 44.293 368 176 6 101 441 1 366 1.60e-96 298

Find 89 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCCCAGGAATATTAT+TGG 0.213736 6.1:+27077621 MS.gene054222:CDS
CCATATGACTATTTCCCTTT+TGG 0.240744 6.1:-27077956 None:intergenic
CTGACAGGGGTCTCTGATTC+AGG 0.253158 6.1:-27077777 None:intergenic
TCTCTGTAATGCTGTTTCTA+TGG 0.280661 6.1:+27073701 MS.gene054222:CDS
AAGTTATCTTGAGAGGAAAA+TGG 0.285450 6.1:+27079619 MS.gene054222:CDS
GTCAAGCCTTCAAAGCTTAC+TGG 0.302358 6.1:+27078137 MS.gene054222:CDS
AAAGCTCTTGTCTCCATTCA+TGG 0.311809 6.1:+27075924 MS.gene054222:CDS
ACCAACGAAGGCATACCTTT+TGG 0.342222 6.1:+27073083 MS.gene054222:CDS
CAGGTTCTGGATTGCGTACT+GGG 0.343310 6.1:+27075867 MS.gene054222:intron
TCAGGTTCTGGATTGCGTAC+TGG 0.343532 6.1:+27075866 MS.gene054222:intron
AAAATCCCAGGAATATTATT+GGG 0.347890 6.1:+27077622 MS.gene054222:CDS
TAAAAGCCCAATAATATTCC+TGG 0.351419 6.1:-27077628 None:intergenic
AAGTTTGCACTGCCTTACTA+TGG 0.353103 6.1:-27079594 None:intergenic
TTATTGCCAGTAAGCTTTGA+AGG 0.366582 6.1:-27078143 None:intergenic
AAAGAAAATGTTGATTCAAT+AGG 0.371631 6.1:-27076606 None:intergenic
TACTCCATTGCTACAAGAAC+TGG 0.375041 6.1:+27078082 MS.gene054222:CDS
CTTGATTGAAGAGTTTATCT+AGG 0.383532 6.1:-27075455 None:intergenic
TCAGTCGACTTTCGGATTGA+TGG 0.388930 6.1:-27078556 None:intergenic
AAGAGTTTATCTAGGTATAG+AGG 0.389663 6.1:-27075447 None:intergenic
ATGTTACCCTCTTTCTTATC+CGG 0.389771 6.1:+27075726 MS.gene054222:CDS
ATCTCAAATCAGGGAGGCAT+TGG 0.390658 6.1:+27077554 MS.gene054222:intron
CCTTCTTACGAAAATATTCA+TGG 0.392818 6.1:+27078209 MS.gene054222:CDS
CTCTTTGCCGGAGTCATGTC+CGG 0.396365 6.1:+27073152 MS.gene054222:CDS
CAAGCAATTTGTAGTAGATA+TGG 0.402882 6.1:+27075652 MS.gene054222:CDS
TTATGCAGCGATCATTCTTC+CGG 0.415941 6.1:+27073641 MS.gene054222:intron
AACAAGAAAACAGCATATTC+CGG 0.426683 6.1:-27073129 None:intergenic
TTTAGATGTTAATTCAAAGT+TGG 0.434582 6.1:+27076626 MS.gene054222:CDS
GGAACGACGAGGCTTTATTT+AGG 0.438067 6.1:+27075889 MS.gene054222:CDS
CACTACGTTCAAGAATTTCA+AGG 0.449665 6.1:-27073211 None:intergenic
AATATTCATGGTGAAGTGAT+TGG 0.459543 6.1:+27078221 MS.gene054222:CDS
CCAAAAGGGAAATAGTCATA+TGG 0.467713 6.1:+27077956 MS.gene054222:CDS
TTATACCTCCATGCCATGAA+TGG 0.470063 6.1:-27075937 None:intergenic
GTAGAATTTACCTTTCCAAC+CGG 0.473889 6.1:-27075745 None:intergenic
TACCCTCTTTCTTATCCGGT+TGG 0.476027 6.1:+27075730 MS.gene054222:CDS
TATACTGAACGAGTTCCAAA+AGG 0.480137 6.1:+27077941 MS.gene054222:CDS
CGGATAGATACTGCACTGAC+AGG 0.486816 6.1:-27077792 None:intergenic
AGTGATTGGTATTATCACTT+TGG 0.495868 6.1:+27078235 MS.gene054222:CDS
CTGTCAGTGCAGTATCTATC+CGG 0.501210 6.1:+27077793 MS.gene054222:CDS
AGTTGCAGCTGCTTCCTCAA+TGG 0.501520 6.1:+27078525 MS.gene054222:CDS
GTCATGTCCGGTCTCACACT+TGG 0.509099 6.1:+27073164 MS.gene054222:CDS
GTTGTGAAGACTACCGGAAA+AGG 0.512912 6.1:+27077984 MS.gene054222:CDS
ATGTTAATTCAAAGTTGGAC+TGG 0.514990 6.1:+27076631 MS.gene054222:CDS
TCTCAAATCAGGGAGGCATT+GGG 0.517004 6.1:+27077555 MS.gene054222:intron
GAATCCAGTTCTTGTAGCAA+TGG 0.517698 6.1:-27078086 None:intergenic
CATGAGACCAAGTGTGAGAC+CGG 0.518128 6.1:-27073171 None:intergenic
CAGGAACTCGGCTGTGCCCG+CGG 0.523586 6.1:-27077590 None:intergenic
TTCTCTTCATCAATTAGTTG+CGG 0.525530 6.1:-27078017 None:intergenic
AGCACTTGATTTGACCGAAA+AGG 0.528383 6.1:+27076121 MS.gene054222:CDS
ACGCACAAGCCATGAAAAGT+TGG 0.534177 6.1:-27075689 None:intergenic
TCGTTCAGTATATCGTATAG+AGG 0.534507 6.1:-27077930 None:intergenic
AAAAGCCCAATAATATTCCT+GGG 0.537470 6.1:-27077627 None:intergenic
CATCCAGGGAGGCCATAGTA+AGG 0.541382 6.1:+27079582 MS.gene054222:intron
AAACACACCGTGGTATTCTC+CGG 0.544224 6.1:-27077812 None:intergenic
AGGAACTCGGCTGTGCCCGC+GGG 0.545017 6.1:-27077589 None:intergenic
TGGGAAAGATTCTTGCCCGC+GGG 0.549753 6.1:+27077574 MS.gene054222:CDS
AGTAGATATGGTCTCGCTGT+AGG 0.551405 6.1:+27075664 MS.gene054222:CDS
CTGTCTATTCTCAAAATCCC+AGG 0.554478 6.1:+27077610 MS.gene054222:CDS
CTGTAATGCTGTTTCTATGG+AGG 0.556264 6.1:+27073704 MS.gene054222:CDS
TCTTTCTTATCCGGTTGGAA+AGG 0.558257 6.1:+27075735 MS.gene054222:CDS
TGCCTTCGTTGGTGAGAGCA+AGG 0.559592 6.1:-27073073 None:intergenic
GAAGCAGAGTAACAAGAAGC+TGG 0.561473 6.1:-27073680 None:intergenic
TCGTATAGAGGCATATCAGA+TGG 0.565213 6.1:-27077918 None:intergenic
TATCTACTACAAATTGCTTG+TGG 0.565273 6.1:-27075649 None:intergenic
AACTTCAAAGTTATCTTGAG+AGG 0.566616 6.1:+27079612 MS.gene054222:CDS
ATCCATGTTGCAGATCCAAA+AGG 0.568878 6.1:-27073098 None:intergenic
TGATGGAGCTCGTGCCATTG+AGG 0.569237 6.1:-27078539 None:intergenic
CTTGAAATTCTTGAACGTAG+TGG 0.572868 6.1:+27073212 MS.gene054222:CDS
TCCAAAAGGTATGCCTTCGT+TGG 0.579698 6.1:-27073084 None:intergenic
TTTCCAACCGGATAAGAAAG+AGG 0.579776 6.1:-27075733 None:intergenic
GGATAGATACTGCACTGACA+GGG 0.588476 6.1:-27077791 None:intergenic
GCTGCTGTTGTGAAGACTAC+CGG 0.588617 6.1:+27077978 MS.gene054222:CDS
ACTAGTTTGCAGAGTAGTGA+TGG 0.595827 6.1:+27078173 MS.gene054222:CDS
TGCAGCGATCATTCTTCCGG+TGG 0.596464 6.1:+27073644 MS.gene054222:intron
ATACTGAACGAGTTCCAAAA+GGG 0.596540 6.1:+27077942 MS.gene054222:CDS
AGTAGTGATGGCACATTAAG+CGG 0.599766 6.1:+27078185 MS.gene054222:CDS
TCTTGTCTCCATTCATGGCA+TGG 0.603983 6.1:+27075929 MS.gene054222:CDS
TGTGAGACCGGACATGACTC+CGG 0.604884 6.1:-27073159 None:intergenic
TTGGGAAAGATTCTTGCCCG+CGG 0.604895 6.1:+27077573 MS.gene054222:CDS
TTCCAACCGGATAAGAAAGA+GGG 0.628963 6.1:-27075732 None:intergenic
CACCTTGCTCTCACCAACGA+AGG 0.637959 6.1:+27073071 MS.gene054222:CDS
GATGAGACAACAATTATCAG+TGG 0.641472 6.1:+27076098 MS.gene054222:CDS
TGTCTCCATTCATGGCATGG+AGG 0.641880 6.1:+27075932 MS.gene054222:CDS
AGGTTCTGGATTGCGTACTG+GGG 0.664585 6.1:+27075868 MS.gene054222:intron
GATAGATACTGCACTGACAG+GGG 0.670187 6.1:-27077790 None:intergenic
GCAACATGGATTGCTTACGC+CGG 0.670459 6.1:+27073110 MS.gene054222:CDS
TTTGAGAATAGACAGGAACT+CGG 0.672689 6.1:-27077602 None:intergenic
CTTCGTTGGTGAGAGCAAGG+TGG 0.701135 6.1:-27073070 None:intergenic
TTGCGTACTGGGGAACGACG+AGG 0.706727 6.1:+27075878 MS.gene054222:CDS
TATCTATCCGGAGAATACCA+CGG 0.709255 6.1:+27077805 MS.gene054222:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAAAGAAACTATT+GGG - chr6.1:27073291-27073310 None:intergenic 10.0%
!! AATTATTTAGTTAATATTCA+CGG + chr6.1:27073445-27073464 MS.gene054222:intron 10.0%
!! ATATACCATTAAAAATAAAT+TGG - chr6.1:27077886-27077905 None:intergenic 10.0%
!! TAAATAATTAAAGAAACTAT+TGG - chr6.1:27073292-27073311 None:intergenic 10.0%
!!! AAAAATTGATAGTATTAATA+CGG - chr6.1:27074670-27074689 None:intergenic 10.0%
!!! AAATTCCAATTTATTTTTAA+TGG + chr6.1:27077878-27077897 MS.gene054222:intron 10.0%
!!! AGATTTTAAAACAATATTAT+AGG + chr6.1:27078835-27078854 MS.gene054222:intron 10.0%
!! AATCAAGAAAATTATTACAA+AGG - chr6.1:27079495-27079514 None:intergenic 15.0%
!! ATCAAGAAAATTATTACAAA+GGG - chr6.1:27079494-27079513 None:intergenic 15.0%
!! ATTAAGAAAACACAAAAATT+AGG - chr6.1:27076184-27076203 None:intergenic 15.0%
!! CTTATTCTCTAAATATTTAA+TGG + chr6.1:27073954-27073973 MS.gene054222:intron 15.0%
!! GACAAGTTATTATTATTAAT+TGG - chr6.1:27075610-27075629 None:intergenic 15.0%
!! TAATAGTATTATATGAAACA+CGG + chr6.1:27073314-27073333 MS.gene054222:intron 15.0%
!! TGAATACATTTATATACAAA+GGG + chr6.1:27075223-27075242 MS.gene054222:intron 15.0%
!! TTATGTACCAAAAAAAAAAA+AGG - chr6.1:27073758-27073777 None:intergenic 15.0%
!! TTGAATACATTTATATACAA+AGG + chr6.1:27075222-27075241 MS.gene054222:intron 15.0%
!!! AAAATTGATAGTATTAATAC+GGG - chr6.1:27074669-27074688 None:intergenic 15.0%
!!! ATAAAAATCTTGTTTTGTAT+CGG - chr6.1:27077304-27077323 None:intergenic 15.0%
!!! ATATTGACCTTTTTTTTTTT+TGG + chr6.1:27073748-27073767 MS.gene054222:intron 15.0%
!! AAAACATAGAAATTACTAGA+TGG - chr6.1:27076551-27076570 None:intergenic 20.0%
!! AAAAGAAATTGTCTATAAAG+AGG - chr6.1:27077373-27077392 None:intergenic 20.0%
!! AATTCTAAACTTGAATTGAA+GGG + chr6.1:27078748-27078767 MS.gene054222:intron 20.0%
!! AGTTAATTCTTAAGATATTG+AGG - chr6.1:27079006-27079025 None:intergenic 20.0%
!! ATATCTTAAGAATTAACTCT+TGG + chr6.1:27079008-27079027 MS.gene054222:intron 20.0%
!! TAATTCTAAACTTGAATTGA+AGG + chr6.1:27078747-27078766 MS.gene054222:intron 20.0%
!! TGTAAATGTTCTGATAAAAA+GGG + chr6.1:27075308-27075327 MS.gene054222:intron 20.0%
!! TTAATTATACAGTTAAGTGA+AGG + chr6.1:27078960-27078979 MS.gene054222:intron 20.0%
!! TTGCATATATCTTATATGTA+GGG - chr6.1:27077464-27077483 None:intergenic 20.0%
!! TTGTTGAATTAAATATGACT+TGG - chr6.1:27078917-27078936 None:intergenic 20.0%
!! TTTAATGGTATATATTTGCA+GGG + chr6.1:27077893-27077912 MS.gene054222:intron 20.0%
!! TTTAGATGTTAATTCAAAGT+TGG + chr6.1:27076626-27076645 MS.gene054222:CDS 20.0%
!! TTTCAAATTATTTACTGTGT+CGG + chr6.1:27073573-27073592 MS.gene054222:intron 20.0%
!! TTTGCATATATCTTATATGT+AGG - chr6.1:27077465-27077484 None:intergenic 20.0%
!!! AAAGAAAATGTTGATTCAAT+AGG - chr6.1:27076609-27076628 None:intergenic 20.0%
!!! AAATTGATAGTATTAATACG+GGG - chr6.1:27074668-27074687 None:intergenic 20.0%
!!! ACTTTTTGACTCAAAATTAA+GGG - chr6.1:27074166-27074185 None:intergenic 20.0%
!!! CTCAATTGATAGTATTAATA+CGG - chr6.1:27074702-27074721 None:intergenic 20.0%
!!! GCTCAAACAATTTTTTAAAA+AGG + chr6.1:27073995-27074014 MS.gene054222:intron 20.0%
!!! GTCAATTGATAGTATTAATA+CGG - chr6.1:27075181-27075200 None:intergenic 20.0%
!!! TACTTTTTGACTCAAAATTA+AGG - chr6.1:27074167-27074186 None:intergenic 20.0%
!!! TATTTTCTTATAAGCTATCA+TGG - chr6.1:27073879-27073898 None:intergenic 20.0%
!!! TCAATTGATAGTATTAATAC+GGG - chr6.1:27074701-27074720 None:intergenic 20.0%
!!! TGAAAAGAGTTGTTTTTTTA+GGG - chr6.1:27074072-27074091 None:intergenic 20.0%
!!! TTGAAAAGAGTTGTTTTTTT+AGG - chr6.1:27074073-27074092 None:intergenic 20.0%
!!! TTTTAATGGTATATATTTGC+AGG + chr6.1:27077892-27077911 MS.gene054222:intron 20.0%
!!! TTTTCAGGAAAATAAAATAG+TGG - chr6.1:27077520-27077539 None:intergenic 20.0%
!!! TTTTTTCAAATATACTCTGT+TGG + chr6.1:27074225-27074244 MS.gene054222:intron 20.0%
! AAAAGCTTTCAAACAAACAA+AGG - chr6.1:27073833-27073852 None:intergenic 25.0%
! AAAATCCCAGGAATATTATT+GGG + chr6.1:27077622-27077641 MS.gene054222:CDS 25.0%
! AAATTTATAAAAACACACCG+TGG - chr6.1:27077825-27077844 None:intergenic 25.0%
! AACTGAATGAAATTATCTCT+TGG + chr6.1:27078347-27078366 MS.gene054222:intron 25.0%
! AATAGTCAACGCATTAAAAA+TGG - chr6.1:27073042-27073061 None:intergenic 25.0%
! AGAACTTCATAAAATTGCTT+AGG - chr6.1:27075583-27075602 None:intergenic 25.0%
! AGAAGAAATACTAAAAACCA+AGG - chr6.1:27078319-27078338 None:intergenic 25.0%
! ATGCTCTTTATACAAACATA+TGG - chr6.1:27076504-27076523 None:intergenic 25.0%
! CTGTAAATGTTCTGATAAAA+AGG + chr6.1:27075307-27075326 MS.gene054222:intron 25.0%
! GAAGAAATACTAAAAACCAA+GGG - chr6.1:27078318-27078337 None:intergenic 25.0%
! GTCTAAAAAATTCAAACATC+CGG + chr6.1:27077160-27077179 MS.gene054222:intron 25.0%
! TCTAAAAAATTCAAACATCC+GGG + chr6.1:27077161-27077180 MS.gene054222:intron 25.0%
! TGAGTCAAAAAGTAAACTTA+GGG + chr6.1:27074173-27074192 MS.gene054222:intron 25.0%
! TGCATATATCTTATATGTAG+GGG - chr6.1:27077463-27077482 None:intergenic 25.0%
! TTAACTAGTGTCTTCTATTT+GGG + chr6.1:27076278-27076297 MS.gene054222:intron 25.0%
! TTATAAATTTATTCTCGTCG+CGG + chr6.1:27077835-27077854 MS.gene054222:intron 25.0%
! TTGAGTCAAAAAGTAAACTT+AGG + chr6.1:27074172-27074191 MS.gene054222:intron 25.0%
! TTTAACTAGTGTCTTCTATT+TGG + chr6.1:27076277-27076296 MS.gene054222:intron 25.0%
! TTTGATGCAAAGAAAAATGT+TGG + chr6.1:27078041-27078060 MS.gene054222:CDS 25.0%
!! AAAAGGCTTAATTACACTTT+TGG + chr6.1:27074012-27074031 MS.gene054222:intron 25.0%
!! AATTGATAGTATTAATACGG+GGG - chr6.1:27074667-27074686 None:intergenic 25.0%
!! ATAGGAAAGTTGATTTCATT+TGG - chr6.1:27078647-27078666 None:intergenic 25.0%
!! CAATTGATAGTATTAATACG+GGG - chr6.1:27074700-27074719 None:intergenic 25.0%
!! CTTTTTATCAGAACATTTAC+AGG - chr6.1:27075309-27075328 None:intergenic 25.0%
!! TACATTATCTCAATCCTTTT+AGG + chr6.1:27077684-27077703 MS.gene054222:intron 25.0%
!! TAGGAAAGTTGATTTCATTT+GGG - chr6.1:27078646-27078665 None:intergenic 25.0%
!! TTGTTATTCTTCAGTATGTT+AGG + chr6.1:27076675-27076694 MS.gene054222:intron 25.0%
!! TTTGTGCTTAATGCTTTTAA+TGG - chr6.1:27078806-27078825 None:intergenic 25.0%
!! TTTTCCAATAGTCTAGTAAT+TGG - chr6.1:27077404-27077423 None:intergenic 25.0%
!!! AAATTTATGAAGCACTGATA+CGG - chr6.1:27073617-27073636 None:intergenic 25.0%
!!! ATTTAACCTGCTTGTTTTTT+AGG + chr6.1:27076049-27076068 MS.gene054222:intron 25.0%
!!! CTTTTTGACTCAAAATTAAG+GGG - chr6.1:27074165-27074184 None:intergenic 25.0%
!!! GAAAAGAGTTGTTTTTTTAG+GGG - chr6.1:27074071-27074090 None:intergenic 25.0%
!!! GTTACTTTCGTTCTTTTTTT+TGG + chr6.1:27075498-27075517 MS.gene054222:CDS 25.0%
!!! TGAGAAAATGCTTCATTTTT+GGG + chr6.1:27078672-27078691 MS.gene054222:intron 25.0%
!!! TTTTCTTGATTTGCTTGAAA+AGG + chr6.1:27079504-27079523 MS.gene054222:intron 25.0%
AAAACAATTAGCATCCATGT+TGG - chr6.1:27079547-27079566 None:intergenic 30.0%
AAAAGCCCAATAATATTCCT+GGG - chr6.1:27077630-27077649 None:intergenic 30.0%
AAAGAAACTATTGGGTTAAG+AGG - chr6.1:27073283-27073302 None:intergenic 30.0%
AACAAGAAAACAGCATATTC+CGG - chr6.1:27073132-27073151 None:intergenic 30.0%
AACACCAATTACTAGACTAT+TGG + chr6.1:27077397-27077416 MS.gene054222:intron 30.0%
AACAGCTATATGCTTAATCT+CGG - chr6.1:27079412-27079431 None:intergenic 30.0%
AACCTGAAACAAATATTCGT+TGG - chr6.1:27075853-27075872 None:intergenic 30.0%
AACTTCAAAGTTATCTTGAG+AGG + chr6.1:27079612-27079631 MS.gene054222:CDS 30.0%
AAGAGTTTATCTAGGTATAG+AGG - chr6.1:27075450-27075469 None:intergenic 30.0%
AAGTTATCTTGAGAGGAAAA+TGG + chr6.1:27079619-27079638 MS.gene054222:CDS 30.0%
AATATGTTGACGTTCATAAC+AGG + chr6.1:27078401-27078420 MS.gene054222:intron 30.0%
AATATTCATGGTGAAGTGAT+TGG + chr6.1:27078221-27078240 MS.gene054222:CDS 30.0%
AATGTTCTGATAAAAAGGGA+CGG + chr6.1:27075312-27075331 MS.gene054222:intron 30.0%
AGAGGAAGAAAATGAAATCT+TGG - chr6.1:27077355-27077374 None:intergenic 30.0%
AGTCAAAAAGTAAACTTAGG+GGG + chr6.1:27074175-27074194 MS.gene054222:intron 30.0%
AGTGATTGGTATTATCACTT+TGG + chr6.1:27078235-27078254 MS.gene054222:CDS 30.0%
ATATATCTTATATGTAGGGG+TGG - chr6.1:27077460-27077479 None:intergenic 30.0%
ATATATGCAAAACATATGCG+TGG + chr6.1:27077474-27077493 MS.gene054222:intron 30.0%
ATATTTATCAATGTGCCATG+CGG + chr6.1:27076358-27076377 MS.gene054222:intron 30.0%
ATCCAACGAATATTTGTTTC+AGG + chr6.1:27075848-27075867 MS.gene054222:intron 30.0%
ATCCTAGATCTATCATCAAT+GGG + chr6.1:27074481-27074500 MS.gene054222:intron 30.0%
ATGATGTTGGAAATGGAATA+AGG + chr6.1:27076318-27076337 MS.gene054222:intron 30.0%
ATGCAAAGAAAAATGTTGGT+GGG + chr6.1:27078045-27078064 MS.gene054222:CDS 30.0%
ATGTTAATTCAAAGTTGGAC+TGG + chr6.1:27076631-27076650 MS.gene054222:CDS 30.0%
ATTATTACAAAGGGTTTGAG+AGG - chr6.1:27079485-27079504 None:intergenic 30.0%
ATTGTACATTTGAAAGCCAA+TGG - chr6.1:27075415-27075434 None:intergenic 30.0%
CAAAATCCCAGGAATATTAT+TGG + chr6.1:27077621-27077640 MS.gene054222:CDS 30.0%
CAAGCAATTTGTAGTAGATA+TGG + chr6.1:27075652-27075671 MS.gene054222:CDS 30.0%
CAGGTATTAAGAAAAGTTGT+TGG - chr6.1:27075290-27075309 None:intergenic 30.0%
CCTTCTTACGAAAATATTCA+TGG + chr6.1:27078209-27078228 MS.gene054222:CDS 30.0%
CTAAAAAATTCAAACATCCG+GGG + chr6.1:27077162-27077181 MS.gene054222:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr6.1:27074384-27074403 MS.gene054222:intron 30.0%
CTTGATTGAAGAGTTTATCT+AGG - chr6.1:27075458-27075477 None:intergenic 30.0%
CTTTCAAATGTACAATATGC+AGG + chr6.1:27075419-27075438 MS.gene054222:intron 30.0%
GAAACAAATATTCGTTGGAT+AGG - chr6.1:27075848-27075867 None:intergenic 30.0%
GAAAGTAAACTTAGGGAAAT+TGG - chr6.1:27074138-27074157 None:intergenic 30.0%
GAGTCAAAAAGTAAACTTAG+GGG + chr6.1:27074174-27074193 MS.gene054222:intron 30.0%
GATACTATACACAAGTGATA+TGG + chr6.1:27078436-27078455 MS.gene054222:intron 30.0%
TAAAAGCCCAATAATATTCC+TGG - chr6.1:27077631-27077650 None:intergenic 30.0%
TAAAGAGTGATGACTTTGTA+GGG - chr6.1:27077227-27077246 None:intergenic 30.0%
TAAGAAACTTCATATTCTGC+TGG - chr6.1:27076245-27076264 None:intergenic 30.0%
TATATGCTTAATCTCGGATA+AGG - chr6.1:27079406-27079425 None:intergenic 30.0%
TATCCTAGATCTATCATCAA+TGG + chr6.1:27074480-27074499 MS.gene054222:intron 30.0%
TATCTACTACAAATTGCTTG+TGG - chr6.1:27075652-27075671 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG - chr6.1:27074457-27074476 None:intergenic 30.0%
TGACGAAAAAAGAACCTAAA+AGG - chr6.1:27077701-27077720 None:intergenic 30.0%
TGATGTTGGAAATGGAATAA+GGG + chr6.1:27076319-27076338 MS.gene054222:intron 30.0%
TGCAACAGAAAGTAAACTTA+GGG - chr6.1:27074099-27074118 None:intergenic 30.0%
TGGGCTATATTTCTTATGAT+GGG - chr6.1:27079034-27079053 None:intergenic 30.0%
TGTTGGAGAGTTTAGTAAAA+CGG - chr6.1:27079530-27079549 None:intergenic 30.0%
TTAAGCACCAAATTTCAACA+TGG + chr6.1:27074447-27074466 MS.gene054222:intron 30.0%
TTCTCTTCATCAATTAGTTG+CGG - chr6.1:27078020-27078039 None:intergenic 30.0%
TTGCAACAGAAAGTAAACTT+AGG - chr6.1:27074100-27074119 None:intergenic 30.0%
TTGGGCTATATTTCTTATGA+TGG - chr6.1:27079035-27079054 None:intergenic 30.0%
! ATATAAGGCTGGAATTTTCA+TGG - chr6.1:27078874-27078893 None:intergenic 30.0%
! ATCACAACTTTGGAAAACTT+AGG - chr6.1:27074041-27074060 None:intergenic 30.0%
! CCATGAATATTTTCGTAAGA+AGG - chr6.1:27078212-27078231 None:intergenic 30.0%
! CTGAGAAAATGCTTCATTTT+TGG + chr6.1:27078671-27078690 MS.gene054222:intron 30.0%
! GTTTTCCAAAGTTGTGATTT+TGG + chr6.1:27074043-27074062 MS.gene054222:intron 30.0%
! TAACTTGTCTTTCTAATTGC+AGG + chr6.1:27075621-27075640 MS.gene054222:intron 30.0%
! TCACAACTTTGGAAAACTTA+GGG - chr6.1:27074040-27074059 None:intergenic 30.0%
! TTTTACTAAACTCTCCAACA+TGG + chr6.1:27079530-27079549 MS.gene054222:intron 30.0%
!! AAAATAAGTCTTGTCGACTT+TGG + chr6.1:27075982-27076001 MS.gene054222:intron 30.0%
!! GGAATTTTTCACAGTTTGTT+TGG - chr6.1:27077865-27077884 None:intergenic 30.0%
!!! TGTTTGTTTTTAACCATCCA+GGG + chr6.1:27079568-27079587 MS.gene054222:intron 30.0%
!!! TTGAATTTTTTAGACGTGTG+AGG - chr6.1:27077155-27077174 None:intergenic 30.0%
!!! TTGTTTGTTTTTAACCATCC+AGG + chr6.1:27079567-27079586 MS.gene054222:intron 30.0%
!!! TTTCGTTCTTTTTTTTGGTG+AGG + chr6.1:27075503-27075522 MS.gene054222:CDS 30.0%
AAACTTAGGGGGCTAAATTT+AGG + chr6.1:27074186-27074205 MS.gene054222:intron 35.0%
AAAGAGTGATGACTTTGTAG+GGG - chr6.1:27077226-27077245 None:intergenic 35.0%
AGCATCAATGATGTTGGAAA+TGG + chr6.1:27076311-27076330 MS.gene054222:intron 35.0%
AGCCCAGCATAGTATTAATA+CGG - chr6.1:27074794-27074813 None:intergenic 35.0%
ATACATTCTCGTGCATACTT+GGG + chr6.1:27076433-27076452 MS.gene054222:intron 35.0%
ATACGGGGTATGTTGAAATT+TGG - chr6.1:27074653-27074672 None:intergenic 35.0%
ATACTGAACGAGTTCCAAAA+GGG + chr6.1:27077942-27077961 MS.gene054222:CDS 35.0%
ATAGTACAGATGTTGTTCCA+TGG + chr6.1:27075771-27075790 MS.gene054222:intron 35.0%
ATGTTACCCTCTTTCTTATC+CGG + chr6.1:27075726-27075745 MS.gene054222:CDS 35.0%
CAACAGAAAGTAAACTTAGG+GGG - chr6.1:27074097-27074116 None:intergenic 35.0%
CACTACGTTCAAGAATTTCA+AGG - chr6.1:27073214-27073233 None:intergenic 35.0%
CACTAGTTAAAACTCAAGAC+AGG - chr6.1:27076268-27076287 None:intergenic 35.0%
CAGTGTAATTACAAGTGTGT+CGG - chr6.1:27073380-27073399 None:intergenic 35.0%
CCAAAAGGGAAATAGTCATA+TGG + chr6.1:27077956-27077975 MS.gene054222:CDS 35.0%
CGAAAGTCGACTGAAAAAAA+GGG + chr6.1:27078565-27078584 MS.gene054222:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr6.1:27074627-27074646 None:intergenic 35.0%
CTATTCTCGTATATAGACGA+TGG + chr6.1:27075807-27075826 MS.gene054222:intron 35.0%
CTTCCAACAAATGACTGAAT+TGG + chr6.1:27076698-27076717 MS.gene054222:intron 35.0%
CTTGAAATTCTTGAACGTAG+TGG + chr6.1:27073212-27073231 MS.gene054222:CDS 35.0%
GAAAAAAAGGGATCAGTAAG+TGG + chr6.1:27078577-27078596 MS.gene054222:intron 35.0%
GATGAGACAACAATTATCAG+TGG + chr6.1:27076098-27076117 MS.gene054222:CDS 35.0%
GATGCAAAGAAAAATGTTGG+TGG + chr6.1:27078044-27078063 MS.gene054222:CDS 35.0%
GCAACAGAAAGTAAACTTAG+GGG - chr6.1:27074098-27074117 None:intergenic 35.0%
GGTTCACAATTGATTGTGAA+AGG - chr6.1:27076163-27076182 None:intergenic 35.0%
GTAAAGAGTGATGACTTTGT+AGG - chr6.1:27077228-27077247 None:intergenic 35.0%
GTAGAATTTACCTTTCCAAC+CGG - chr6.1:27075748-27075767 None:intergenic 35.0%
TAATACGGGGTATGTTGAAA+CGG - chr6.1:27074655-27074674 None:intergenic 35.0%
TATACTGAACGAGTTCCAAA+AGG + chr6.1:27077941-27077960 MS.gene054222:CDS 35.0%
TCATGTGACTATGTGATGTT+GGG - chr6.1:27079083-27079102 None:intergenic 35.0%
TCGTTCAGTATATCGTATAG+AGG - chr6.1:27077933-27077952 None:intergenic 35.0%
TGAAATTATCTCTTGGATGC+AGG + chr6.1:27078354-27078373 MS.gene054222:intron 35.0%
TGCAAAGAAAAATGTTGGTG+GGG + chr6.1:27078046-27078065 MS.gene054222:CDS 35.0%
TTTACCAAGAGCAATGACTT+GGG + chr6.1:27077243-27077262 MS.gene054222:intron 35.0%
TTTCCCTAAGTTTACTTTCC+AGG + chr6.1:27074139-27074158 MS.gene054222:intron 35.0%
TTTCGTGTTTCTCTGTTGTA+TGG + chr6.1:27078711-27078730 MS.gene054222:intron 35.0%
TTTGAGAATAGACAGGAACT+CGG - chr6.1:27077605-27077624 None:intergenic 35.0%
! AAGCATTTTCTCAGCTCAAT+AGG - chr6.1:27078665-27078684 None:intergenic 35.0%
! AATTGCAGCACTTACCTTTT+CGG - chr6.1:27076138-27076157 None:intergenic 35.0%
! ACAACTTTGGAAAACTTAGG+GGG - chr6.1:27074038-27074057 None:intergenic 35.0%
! ATACTGACTAAGTCTCAAGA+GGG + chr6.1:27079303-27079322 MS.gene054222:intron 35.0%
! CACAACTTTGGAAAACTTAG+GGG - chr6.1:27074039-27074058 None:intergenic 35.0%
! CCATATGACTATTTCCCTTT+TGG - chr6.1:27077959-27077978 None:intergenic 35.0%
! TAGGCAGGATAAAAGTTTTC+AGG - chr6.1:27077535-27077554 None:intergenic 35.0%
! TCATCTAGTGGGTATTCATA+TGG - chr6.1:27077024-27077043 None:intergenic 35.0%
! TGTTTTCTTGTTCTCTTTGC+CGG + chr6.1:27073140-27073159 MS.gene054222:CDS 35.0%
! TTATTGCCAGTAAGCTTTGA+AGG - chr6.1:27078146-27078165 None:intergenic 35.0%
! TTCGTTGGATAGGTAGTTTT+CGG - chr6.1:27075838-27075857 None:intergenic 35.0%
!! CAATGCCTTTCTGGAATATA+AGG - chr6.1:27078889-27078908 None:intergenic 35.0%
!! CGAATATTTGTTTCAGGTTC+TGG + chr6.1:27075854-27075873 MS.gene054222:intron 35.0%
!! TCTCTGTAATGCTGTTTCTA+TGG + chr6.1:27073701-27073720 MS.gene054222:CDS 35.0%
!!! CCTTTTTTTCAGTCGACTTT+CGG - chr6.1:27078567-27078586 None:intergenic 35.0%
!!! TTGTTTTTTAGGCTGGGAAA+GGG + chr6.1:27076060-27076079 MS.gene054222:intron 35.0%
AAAGCTCTTGTCTCCATTCA+TGG + chr6.1:27075924-27075943 MS.gene054222:CDS 40.0%
AACTTAGGGAAATTGGCATG+AGG - chr6.1:27074131-27074150 None:intergenic 40.0%
AAGTTTGCACTGCCTTACTA+TGG - chr6.1:27079597-27079616 None:intergenic 40.0%
ACATGATCACTGGAAGTGAA+CGG - chr6.1:27076401-27076420 None:intergenic 40.0%
ACCCCGTATTAATACTATGC+TGG + chr6.1:27074788-27074807 MS.gene054222:intron 40.0%
ACTATTGGGTTAAGAGGAAG+AGG - chr6.1:27073277-27073296 None:intergenic 40.0%
ACTTAGGGAAATTGGCATGA+GGG - chr6.1:27074130-27074149 None:intergenic 40.0%
AGAAAGGTGACAGCTTAAGT+TGG + chr6.1:27079104-27079123 MS.gene054222:intron 40.0%
AGTAGTGATGGCACATTAAG+CGG + chr6.1:27078185-27078204 MS.gene054222:CDS 40.0%
AGTATCACGTGTTTATCCTG+TGG - chr6.1:27079288-27079307 None:intergenic 40.0%
ATCCATGTTGCAGATCCAAA+AGG - chr6.1:27073101-27073120 None:intergenic 40.0%
ATCCTGCCTATCTCAAATCA+GGG + chr6.1:27077545-27077564 MS.gene054222:intron 40.0%
ATGCCGCACAAATTCTATCA+TGG - chr6.1:27076740-27076759 None:intergenic 40.0%
ATGTTGGGCTATGTCCATTA+TGG - chr6.1:27079068-27079087 None:intergenic 40.0%
CAAACCAAAGGTCGCAATTT+AGG - chr6.1:27074285-27074304 None:intergenic 40.0%
CAAAGAGTTAGGCAGGTTTA+GGG - chr6.1:27075388-27075407 None:intergenic 40.0%
CACATAGTCACATGAGAGAA+AGG + chr6.1:27079088-27079107 MS.gene054222:intron 40.0%
CATACATTCTCGTGCATACT+TGG + chr6.1:27076432-27076451 MS.gene054222:intron 40.0%
CCCAGCATAGTATTAATACG+GGG - chr6.1:27074792-27074811 None:intergenic 40.0%
CCCCGTATTAATACTATGCT+GGG + chr6.1:27074789-27074808 MS.gene054222:intron 40.0%
CCGAAAGTCGACTGAAAAAA+AGG + chr6.1:27078564-27078583 MS.gene054222:CDS 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr6.1:27074422-27074441 None:intergenic 40.0%
CCTTCTCAGAAAAAACAAGC+TGG + chr6.1:27073239-27073258 MS.gene054222:CDS 40.0%
CGATCATGGTAGAATTTGTG+CGG + chr6.1:27076813-27076832 MS.gene054222:intron 40.0%
CGTCCATGATAGAATTTGTG+CGG + chr6.1:27076734-27076753 MS.gene054222:intron 40.0%
CTAGATGATCGTTTCAACCA+TGG + chr6.1:27077036-27077055 MS.gene054222:intron 40.0%
CTCATGTGACTATGTGATGT+TGG - chr6.1:27079084-27079103 None:intergenic 40.0%
CTGTCTATTCTCAAAATCCC+AGG + chr6.1:27077610-27077629 MS.gene054222:CDS 40.0%
CTTGTAAGGTGAGGCAATTA+AGG - chr6.1:27074604-27074623 None:intergenic 40.0%
CTTTACCAAGAGCAATGACT+TGG + chr6.1:27077242-27077261 MS.gene054222:intron 40.0%
GAAAGGTGACAGCTTAAGTT+GGG + chr6.1:27079105-27079124 MS.gene054222:intron 40.0%
GAACATGCTCAATCTATCAC+AGG + chr6.1:27077104-27077123 MS.gene054222:intron 40.0%
GAATCCAGTTCTTGTAGCAA+TGG - chr6.1:27078089-27078108 None:intergenic 40.0%
GAGCCAATTCAGTCATTTGT+TGG - chr6.1:27076704-27076723 None:intergenic 40.0%
GCACGAGAATGTATGACTAA+CGG - chr6.1:27076427-27076446 None:intergenic 40.0%
GCATACCGGGAAAAAAATCT+CGG + chr6.1:27079169-27079188 MS.gene054222:intron 40.0%
GCCCAGCATAGTATTAATAC+GGG - chr6.1:27074793-27074812 None:intergenic 40.0%
GGTTGAAACGATCATCTAGT+GGG - chr6.1:27077035-27077054 None:intergenic 40.0%
GTAATTACAAGTGTCCGTGT+TGG - chr6.1:27073511-27073530 None:intergenic 40.0%
GTATCACGTGTTTATCCTGT+GGG - chr6.1:27079287-27079306 None:intergenic 40.0%
GTATGTTGAAACGGCTTGTA+AGG - chr6.1:27074887-27074906 None:intergenic 40.0%
TAATATTCACGGACAGTCCT+CGG + chr6.1:27073456-27073475 MS.gene054222:intron 40.0%
TACTCCATTGCTACAAGAAC+TGG + chr6.1:27078082-27078101 MS.gene054222:CDS 40.0%
TATCACGTGTTTATCCTGTG+GGG - chr6.1:27079286-27079305 None:intergenic 40.0%
TATCCTGCCTATCTCAAATC+AGG + chr6.1:27077544-27077563 MS.gene054222:intron 40.0%
TATCTATCCGGAGAATACCA+CGG + chr6.1:27077805-27077824 MS.gene054222:CDS 40.0%
TCAAAGAGTTAGGCAGGTTT+AGG - chr6.1:27075389-27075408 None:intergenic 40.0%
TCTTTCTTATCCGGTTGGAA+AGG + chr6.1:27075735-27075754 MS.gene054222:CDS 40.0%
TGAGGCAATTAAGGTGACTA+GGG - chr6.1:27074595-27074614 None:intergenic 40.0%
TGGAAATGGAATAAGGGAAC+TGG + chr6.1:27076325-27076344 MS.gene054222:intron 40.0%
TGGAAATTCCGCCTTAATTG+TGG + chr6.1:27074245-27074264 MS.gene054222:intron 40.0%
TGGACCGAGCAAATCATTTA+GGG + chr6.1:27077278-27077297 MS.gene054222:intron 40.0%
TGGTTGAAACGATCATCTAG+TGG - chr6.1:27077036-27077055 None:intergenic 40.0%
TTACCAAGAGCAATGACTTG+GGG + chr6.1:27077244-27077263 MS.gene054222:intron 40.0%
TTATACCTCCATGCCATGAA+TGG - chr6.1:27075940-27075959 None:intergenic 40.0%
TTATGCAGCGATCATTCTTC+CGG + chr6.1:27073641-27073660 MS.gene054222:intron 40.0%
TTCCAACCGGATAAGAAAGA+GGG - chr6.1:27075735-27075754 None:intergenic 40.0%
TTCTGATAAAAAGGGACGGT+GGG + chr6.1:27075316-27075335 MS.gene054222:intron 40.0%
TTGGATGCAGGAAGAAATTG+TGG + chr6.1:27078366-27078385 MS.gene054222:intron 40.0%
TTTAGATATGTGCATGCCCT+TGG + chr6.1:27078299-27078318 MS.gene054222:intron 40.0%
TTTCCAACCGGATAAGAAAG+AGG - chr6.1:27075736-27075755 None:intergenic 40.0%
! AAAGGTGACAGCTTAAGTTG+GGG + chr6.1:27079106-27079125 MS.gene054222:intron 40.0%
! ACTAGTTTGCAGAGTAGTGA+TGG + chr6.1:27078173-27078192 MS.gene054222:CDS 40.0%
! AGCACTTGATTTGACCGAAA+AGG + chr6.1:27076121-27076140 MS.gene054222:CDS 40.0%
! AGCCCATTGATGATAGATCT+AGG - chr6.1:27074486-27074505 None:intergenic 40.0%
! CTTGGGTTCTCTCTATGTTT+TGG + chr6.1:27076450-27076469 MS.gene054222:intron 40.0%
! GATACTGACTAAGTCTCAAG+AGG + chr6.1:27079302-27079321 MS.gene054222:intron 40.0%
! GTTGTTTCCCTCAAACTAGT+AGG + chr6.1:27077432-27077451 MS.gene054222:intron 40.0%
! TACCTTTTGGATCTGCAACA+TGG + chr6.1:27073096-27073115 MS.gene054222:CDS 40.0%
! TCCAGCCTTATATTCCAGAA+AGG + chr6.1:27078881-27078900 MS.gene054222:intron 40.0%
! TCGTATAGAGGCATATCAGA+TGG - chr6.1:27077921-27077940 None:intergenic 40.0%
! TCTAGTGGGTATTCATATGG+TGG - chr6.1:27077021-27077040 None:intergenic 40.0%
! TGGGTATTCATATGGTGGAA+CGG - chr6.1:27077016-27077035 None:intergenic 40.0%
!! AATGCTTCATTTTTGGGCCT+CGG + chr6.1:27078678-27078697 MS.gene054222:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr6.1:27074625-27074644 MS.gene054222:intron 40.0%
!! CTGGGATTTTGAGAATAGAC+AGG - chr6.1:27077612-27077631 None:intergenic 40.0%
!! CTGTAATGCTGTTTCTATGG+AGG + chr6.1:27073704-27073723 MS.gene054222:CDS 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr6.1:27074327-27074346 MS.gene054222:intron 40.0%
!! TGTTTTTGAACAGACTGCTG+AGG + chr6.1:27076572-27076591 MS.gene054222:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr6.1:27074328-27074347 MS.gene054222:intron 40.0%
!!! AACCTGCTTGTTTTTTAGGC+TGG + chr6.1:27076053-27076072 MS.gene054222:intron 40.0%
!!! ACCTGCTTGTTTTTTAGGCT+GGG + chr6.1:27076054-27076073 MS.gene054222:intron 40.0%
!!! AGTTTTGGAATAACACCGCA+TGG - chr6.1:27076376-27076395 None:intergenic 40.0%
!!! CCAGCTTGTTTTTTCTGAGA+AGG - chr6.1:27073242-27073261 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr6.1:27074419-27074438 MS.gene054222:intron 40.0%
!!! CTTGTTTTTTAGGCTGGGAA+AGG + chr6.1:27076059-27076078 MS.gene054222:intron 40.0%
!!! TGGTGTTGCTTTTTAACCAC+CGG - chr6.1:27073663-27073682 None:intergenic 40.0%
!!! TGTTTTTTAGGCTGGGAAAG+GGG + chr6.1:27076061-27076080 MS.gene054222:intron 40.0%
!!! TTGTTTTTAACCATCCAGGG+AGG + chr6.1:27079571-27079590 MS.gene054222:intron 40.0%
AAACACACCGTGGTATTCTC+CGG - chr6.1:27077815-27077834 None:intergenic 45.0%
AAGGACGGAATCACGGATAA+AGG + chr6.1:27079335-27079354 MS.gene054222:intron 45.0%
AATTGCCTCACCTTACAAGC+CGG + chr6.1:27074605-27074624 MS.gene054222:intron 45.0%
ACATGCCACGATTCTTGGAA+GGG + chr6.1:27079360-27079379 MS.gene054222:intron 45.0%
ACGCACAAGCCATGAAAAGT+TGG - chr6.1:27075692-27075711 None:intergenic 45.0%
ACTAGACTCCGTTCCTTTAC+GGG - chr6.1:27079215-27079234 None:intergenic 45.0%
AGAGTCCTAACTATCCGATG+TGG - chr6.1:27074366-27074385 None:intergenic 45.0%
AGTAGATATGGTCTCGCTGT+AGG + chr6.1:27075664-27075683 MS.gene054222:CDS 45.0%
ATGCCTCACAAGTTCTACCA+TGG - chr6.1:27076977-27076996 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG - chr6.1:27074417-27074436 None:intergenic 45.0%
CAACCATGGTAGAACTTGTG+AGG + chr6.1:27077050-27077069 MS.gene054222:intron 45.0%
CACTAGACTCCGTTCCTTTA+CGG - chr6.1:27079216-27079235 None:intergenic 45.0%
CACTTAGAAGGGATAATCCC+CGG - chr6.1:27077182-27077201 None:intergenic 45.0%
CCAATGGCTGTCAAAGAGTT+AGG - chr6.1:27075399-27075418 None:intergenic 45.0%
CCTAACTCTTTGACAGCCAT+TGG + chr6.1:27075396-27075415 MS.gene054222:intron 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr6.1:27074329-27074348 None:intergenic 45.0%
CTAACGGAACACATGATCAC+TGG - chr6.1:27076411-27076430 None:intergenic 45.0%
CTAAGTCTCAAGAGGGTAAG+CGG + chr6.1:27079310-27079329 MS.gene054222:intron 45.0%
CTACATGATCATTGCGACCA+TGG + chr6.1:27076957-27076976 MS.gene054222:intron 45.0%
CTAGGGAAGGACCACAATTA+AGG - chr6.1:27074578-27074597 None:intergenic 45.0%
CTAGGGGAGAACCACAATTA+AGG - chr6.1:27074259-27074278 None:intergenic 45.0%
CTATGTCCATTATGGCAGAG+GGG - chr6.1:27079060-27079079 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr6.1:27074318-27074337 MS.gene054222:intron 45.0%
CTGCAATGATGGCAAACCAA+AGG - chr6.1:27074297-27074316 None:intergenic 45.0%
CTGGACCGAGCAAATCATTT+AGG + chr6.1:27077277-27077296 MS.gene054222:intron 45.0%
CTGTCAGTGCAGTATCTATC+CGG + chr6.1:27077793-27077812 MS.gene054222:CDS 45.0%
CTTAGGGAAATTGGCATGAG+GGG - chr6.1:27074129-27074148 None:intergenic 45.0%
GAAGCAGAGTAACAAGAAGC+TGG - chr6.1:27073683-27073702 None:intergenic 45.0%
GAGTCCTAACTATCCGATGT+GGG - chr6.1:27074365-27074384 None:intergenic 45.0%
GCAATTAAGGTGACTAGGGA+AGG - chr6.1:27074591-27074610 None:intergenic 45.0%
GCTATGTCCATTATGGCAGA+GGG - chr6.1:27079061-27079080 None:intergenic 45.0%
GCTCATGTGAGCACTTAGAA+GGG - chr6.1:27077193-27077212 None:intergenic 45.0%
GGGAAATTCCGCCTTAATTG+TGG + chr6.1:27074564-27074583 MS.gene054222:intron 45.0%
GGGAGCCAAAATCACAACTT+TGG - chr6.1:27074051-27074070 None:intergenic 45.0%
GGGCCTGGAAAGTAAACTTA+GGG - chr6.1:27074145-27074164 None:intergenic 45.0%
GTCAAGCCTTCAAAGCTTAC+TGG + chr6.1:27078137-27078156 MS.gene054222:CDS 45.0%
GTGAGGCAATTAAGGTGACT+AGG - chr6.1:27074596-27074615 None:intergenic 45.0%
GTTCTGATAAAAAGGGACGG+TGG + chr6.1:27075315-27075334 MS.gene054222:intron 45.0%
GTTGTGAAGACTACCGGAAA+AGG + chr6.1:27077984-27078003 MS.gene054222:CDS 45.0%
TAAGTCTCAAGAGGGTAAGC+GGG + chr6.1:27079311-27079330 MS.gene054222:intron 45.0%
TACATGCCACGATTCTTGGA+AGG + chr6.1:27079359-27079378 MS.gene054222:intron 45.0%
TACCCTCTTTCTTATCCGGT+TGG + chr6.1:27075730-27075749 MS.gene054222:CDS 45.0%
TACCGGGAAAAAAATCTCGG+AGG + chr6.1:27079172-27079191 MS.gene054222:intron 45.0%
TAGTCCCACATCGGATAGTT+AGG + chr6.1:27074358-27074377 MS.gene054222:intron 45.0%
TATGAAACACGGACACTCCT+CGG + chr6.1:27073325-27073344 MS.gene054222:intron 45.0%
TCCCAGCCTAAAAAACAAGC+AGG - chr6.1:27076058-27076077 None:intergenic 45.0%
TCCGAATCCATCTCGGATAT+GGG - chr6.1:27079240-27079259 None:intergenic 45.0%
TCTCTTGTCATGACCCGTAA+AGG + chr6.1:27079199-27079218 MS.gene054222:intron 45.0%
TCTTGTCTCCATTCATGGCA+TGG + chr6.1:27075929-27075948 MS.gene054222:CDS 45.0%
TGACTCAAAATTAAGGGGCC+TGG - chr6.1:27074160-27074179 None:intergenic 45.0%
TGAGACGGTACAGTTGACAA+GGG - chr6.1:27077080-27077099 None:intergenic 45.0%
TGCTCATGTGAGCACTTAGA+AGG - chr6.1:27077194-27077213 None:intergenic 45.0%
TGGTCGCAATGATCATGTAG+CGG - chr6.1:27076957-27076976 None:intergenic 45.0%
TGTCATGACCCGTAAAGGAA+CGG + chr6.1:27079204-27079223 MS.gene054222:intron 45.0%
TTGAAACGGCTTGTAAGGTG+AGG - chr6.1:27074882-27074901 None:intergenic 45.0%
TTGGACAAGCAATGCCTTTC+TGG - chr6.1:27078898-27078917 None:intergenic 45.0%
! ACCCATATCCGAGATGGATT+CGG + chr6.1:27079236-27079255 MS.gene054222:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr6.1:27074323-27074342 None:intergenic 45.0%
! ATCTCAAATCAGGGAGGCAT+TGG + chr6.1:27077554-27077573 MS.gene054222:intron 45.0%
! ATGCCTCCCTGATTTGAGAT+AGG - chr6.1:27077554-27077573 None:intergenic 45.0%
! CGGAGTTTCTTTGCCTTTTC+CGG - chr6.1:27078000-27078019 None:intergenic 45.0%
! CTGTAGGTGCCAACTTTTCA+TGG + chr6.1:27075680-27075699 MS.gene054222:CDS 45.0%
! GATAGATACTGCACTGACAG+GGG - chr6.1:27077793-27077812 None:intergenic 45.0%
! GGACCTAGTCAAAAGCGTAA+TGG - chr6.1:27079265-27079284 None:intergenic 45.0%
! GGATAGATACTGCACTGACA+GGG - chr6.1:27077794-27077813 None:intergenic 45.0%
! GGTGGATCCTACTAGTTTGA+GGG - chr6.1:27077442-27077461 None:intergenic 45.0%
! TACCAAGAGCAATGACTTGG+GGG + chr6.1:27077245-27077264 MS.gene054222:intron 45.0%
! TCAGTCGACTTTCGGATTGA+TGG - chr6.1:27078559-27078578 None:intergenic 45.0%
! TCCAAAAGGTATGCCTTCGT+TGG - chr6.1:27073087-27073106 None:intergenic 45.0%
! TGGAAGTGAACGGTGAGTTT+TGG - chr6.1:27076391-27076410 None:intergenic 45.0%
! TTTTGAACAGACTGCTGAGG+AGG + chr6.1:27076575-27076594 MS.gene054222:intron 45.0%
!! ACCAACGAAGGCATACCTTT+TGG + chr6.1:27073083-27073102 MS.gene054222:CDS 45.0%
!! AGGAACGGTGTTGTTCACAA+AGG - chr6.1:27076843-27076862 None:intergenic 45.0%
!! AGGCCATTACGCTTTTGACT+AGG + chr6.1:27079259-27079278 MS.gene054222:intron 45.0%
!! ATGCTTCATTTTTGGGCCTC+GGG + chr6.1:27078679-27078698 MS.gene054222:intron 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr6.1:27074320-27074339 None:intergenic 45.0%
!! CATTATGGCAGAGGGGTATT+GGG - chr6.1:27079053-27079072 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - chr6.1:27074618-27074637 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + chr6.1:27074615-27074634 MS.gene054222:intron 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr6.1:27074326-27074345 MS.gene054222:intron 45.0%
!! CTGGGAAGCATCAATGATGT+TGG + chr6.1:27076305-27076324 MS.gene054222:intron 45.0%
!! GCCTTTCTGGAATATAAGGC+TGG - chr6.1:27078885-27078904 None:intergenic 45.0%
!! GGAACGACGAGGCTTTATTT+AGG + chr6.1:27075889-27075908 MS.gene054222:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr6.1:27074329-27074348 MS.gene054222:intron 45.0%
!! TCGCTATCTTTGCTGTTCAC+TGG + chr6.1:27075538-27075557 MS.gene054222:intron 45.0%
!! TCGGCCCTAAATGATTTGCT+CGG - chr6.1:27077285-27077304 None:intergenic 45.0%
!! TCTCAAATCAGGGAGGCATT+GGG + chr6.1:27077555-27077574 MS.gene054222:intron 45.0%
!!! CTCCTCCGAGATTTTTTTCC+CGG - chr6.1:27079177-27079196 None:intergenic 45.0%
!!! GTTTTTTAGGCTGGGAAAGG+GGG + chr6.1:27076062-27076081 MS.gene054222:intron 45.0%
!!! TTTTCTTTTTATAAATAATT+AGG + chr6.1:27077731-27077750 MS.gene054222:intron 5.0%
AATGGCCTCCGAATCCATCT+CGG - chr6.1:27079247-27079266 None:intergenic 50.0%
ACACTCCTCACCTTACAAGC+TGG + chr6.1:27074409-27074428 MS.gene054222:intron 50.0%
AGGCTACATGCCACGATTCT+TGG + chr6.1:27079355-27079374 MS.gene054222:intron 50.0%
AGGTCGCAATTTAGGCGACT+AGG - chr6.1:27074277-27074296 None:intergenic 50.0%
AGTTGCAGCTGCTTCCTCAA+TGG + chr6.1:27078525-27078544 MS.gene054222:CDS 50.0%
ATAGCCAGAGCTTGATGCCA+TGG - chr6.1:27075791-27075810 None:intergenic 50.0%
ATGCCTCACAAGTTCTGCCA+TGG - chr6.1:27076898-27076917 None:intergenic 50.0%
CACGAAAAGTTCAAGACCCG+AGG - chr6.1:27078698-27078717 None:intergenic 50.0%
CATGAGACCAAGTGTGAGAC+CGG - chr6.1:27073174-27073193 None:intergenic 50.0%
CCAATACCCCTCTGCCATAA+TGG + chr6.1:27079051-27079070 MS.gene054222:intron 50.0%
CCACATAGTCGTAGCTACCA+TGG + chr6.1:27076878-27076897 MS.gene054222:intron 50.0%
CCACTCAATCAGCTCGATCA+TGG + chr6.1:27076799-27076818 MS.gene054222:intron 50.0%
CCATGATCGAGCTGATTGAG+TGG - chr6.1:27076802-27076821 None:intergenic 50.0%
CCATGGTAGCTACGACTATG+TGG - chr6.1:27076881-27076900 None:intergenic 50.0%
CGACCATGGTAGAACTTGTG+AGG + chr6.1:27076971-27076990 MS.gene054222:intron 50.0%
CGAGCATACTTGCGATGGAA+CGG - chr6.1:27076779-27076798 None:intergenic 50.0%
CGGGAAAAAAATCTCGGAGG+AGG + chr6.1:27079175-27079194 MS.gene054222:intron 50.0%
CGGGCATACCTGTGATAGAA+CGG - chr6.1:27076937-27076956 None:intergenic 50.0%
CGGGCATATCTGAGAAGGAA+CGG - chr6.1:27076858-27076877 None:intergenic 50.0%
CTACCATGGCAGAACTTGTG+AGG + chr6.1:27076892-27076911 MS.gene054222:intron 50.0%
CTAGTGACCCATATCCGAGA+TGG + chr6.1:27079230-27079249 MS.gene054222:intron 50.0%
CTCCGAATCCATCTCGGATA+TGG - chr6.1:27079241-27079260 None:intergenic 50.0%
CTGCCTATCTCAAATCAGGG+AGG + chr6.1:27077548-27077567 MS.gene054222:intron 50.0%
GAGGAACATGTTCGTACCAG+TGG - chr6.1:27077136-27077155 None:intergenic 50.0%
GCTGCTGTTGTGAAGACTAC+CGG + chr6.1:27077978-27077997 MS.gene054222:CDS 50.0%
GGCATACCTGTGATAGAACG+GGG - chr6.1:27076935-27076954 None:intergenic 50.0%
GGCTATGTCCATTATGGCAG+AGG - chr6.1:27079062-27079081 None:intergenic 50.0%
GGGAAGGACCACAATTAAGG+CGG - chr6.1:27074575-27074594 None:intergenic 50.0%
GGGCATACCTGTGATAGAAC+GGG - chr6.1:27076936-27076955 None:intergenic 50.0%
GGGGAGAACCACAATTAAGG+CGG - chr6.1:27074256-27074275 None:intergenic 50.0%
GGGGCCTGGAAAGTAAACTT+AGG - chr6.1:27074146-27074165 None:intergenic 50.0%
GGTCGCAATGATCATGTAGC+GGG - chr6.1:27076956-27076975 None:intergenic 50.0%
GGTCGCAATTTAGGCGACTA+GGG - chr6.1:27074276-27074295 None:intergenic 50.0%
GTCGCAATTTAGGCGACTAG+GGG - chr6.1:27074275-27074294 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG + chr6.1:27074278-27074297 MS.gene054222:intron 50.0%
GTCTTCTATTTGGGCACGCT+GGG + chr6.1:27076287-27076306 MS.gene054222:intron 50.0%
GTGAGACGGTACAGTTGACA+AGG - chr6.1:27077081-27077100 None:intergenic 50.0%
GTGTCATGCGATGTCCAACA+CGG + chr6.1:27073494-27073513 MS.gene054222:intron 50.0%
TAGAACGGGGCAGTTCACAA+AGG - chr6.1:27076922-27076941 None:intergenic 50.0%
TGAGCATGTTCGCAGTGAGA+CGG - chr6.1:27077095-27077114 None:intergenic 50.0%
TGGAACGGAGCTGTTCACAA+AGG - chr6.1:27076764-27076783 None:intergenic 50.0%
TGGCTGTCAAAGAGTTAGGC+AGG - chr6.1:27075395-27075414 None:intergenic 50.0%
TGGTAGCTACGACTATGTGG+CGG - chr6.1:27076878-27076897 None:intergenic 50.0%
TGTCTCCATTCATGGCATGG+AGG + chr6.1:27075932-27075951 MS.gene054222:CDS 50.0%
TGTCTTCTATTTGGGCACGC+TGG + chr6.1:27076286-27076305 MS.gene054222:intron 50.0%
TGTTCCATGGCATCAAGCTC+TGG + chr6.1:27075784-27075803 MS.gene054222:intron 50.0%
TGTTGGACATCGCATGACAC+CGG - chr6.1:27073494-27073513 None:intergenic 50.0%
TTGGGAAAGATTCTTGCCCG+CGG + chr6.1:27077573-27077592 MS.gene054222:CDS 50.0%
! ACCAAGAGCAATGACTTGGG+GGG + chr6.1:27077246-27077265 MS.gene054222:intron 50.0%
! CATATCCGAGATGGATTCGG+AGG + chr6.1:27079239-27079258 MS.gene054222:intron 50.0%
! CCATTATGGCAGAGGGGTAT+TGG - chr6.1:27079054-27079073 None:intergenic 50.0%
! CGGATAGATACTGCACTGAC+AGG - chr6.1:27077795-27077814 None:intergenic 50.0%
! CTCCCTGATTTGAGATAGGC+AGG - chr6.1:27077550-27077569 None:intergenic 50.0%
! GCAACATGGATTGCTTACGC+CGG + chr6.1:27073110-27073129 MS.gene054222:CDS 50.0%
! GGGTGGATCCTACTAGTTTG+AGG - chr6.1:27077443-27077462 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr6.1:27074349-27074368 MS.gene054222:intron 50.0%
!! AGGTTCTGGATTGCGTACTG+GGG + chr6.1:27075868-27075887 MS.gene054222:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - chr6.1:27074613-27074632 None:intergenic 50.0%
!! CAGGTTCTGGATTGCGTACT+GGG + chr6.1:27075867-27075886 MS.gene054222:intron 50.0%
!! TCAGGTTCTGGATTGCGTAC+TGG + chr6.1:27075866-27075885 MS.gene054222:intron 50.0%
!! TGAAGCACTGATACGGACAC+CGG - chr6.1:27073610-27073629 None:intergenic 50.0%
!! TGGAACGGTGCTGTTCACAA+GGG - chr6.1:27077001-27077020 None:intergenic 50.0%
ACACGGACACTCCTCGGATT+AGG + chr6.1:27073331-27073350 MS.gene054222:intron 55.0%
ACTGATACGGACACCGGACA+CGG - chr6.1:27073604-27073623 None:intergenic 55.0%
AGAGGGTAAGCGGGAAAGGA+CGG + chr6.1:27079320-27079339 MS.gene054222:intron 55.0%
AGCGGGAAAGGACGGAATCA+CGG + chr6.1:27079328-27079347 MS.gene054222:intron 55.0%
AGTGGCGAGCATACTTGCGA+TGG - chr6.1:27076784-27076803 None:intergenic 55.0%
CACCTTGCTCTCACCAACGA+AGG + chr6.1:27073071-27073090 MS.gene054222:CDS 55.0%
CATCCAGGGAGGCCATAGTA+AGG + chr6.1:27079582-27079601 MS.gene054222:intron 55.0%
CTATCACAGGCACACACCAC+TGG + chr6.1:27077117-27077136 MS.gene054222:intron 55.0%
CTCAAGAGGGTAAGCGGGAA+AGG + chr6.1:27079316-27079335 MS.gene054222:intron 55.0%
CTCTTTGCCGGAGTCATGTC+CGG + chr6.1:27073152-27073171 MS.gene054222:CDS 55.0%
CTGACAGGGGTCTCTGATTC+AGG - chr6.1:27077780-27077799 None:intergenic 55.0%
CTTACTATGGCCTCCCTGGA+TGG - chr6.1:27079584-27079603 None:intergenic 55.0%
GAACTGCCCCGTTCTATCAC+AGG + chr6.1:27076926-27076945 MS.gene054222:intron 55.0%
GGTAGCTACGACTATGTGGC+GGG - chr6.1:27076877-27076896 None:intergenic 55.0%
GGTCGAATTGACCACGTGCT+CGG + chr6.1:27079130-27079149 MS.gene054222:intron 55.0%
GTCATGTCCGGTCTCACACT+TGG + chr6.1:27073164-27073183 MS.gene054222:CDS 55.0%
GTGATGACTTTGTAGGGGCG+AGG - chr6.1:27077221-27077240 None:intergenic 55.0%
GTTGGACATCGCATGACACC+GGG - chr6.1:27073493-27073512 None:intergenic 55.0%
TCACGGACAGTCCTCGGATT+AGG + chr6.1:27073462-27073481 MS.gene054222:intron 55.0%
TGCAGCGATCATTCTTCCGG+TGG + chr6.1:27073644-27073663 MS.gene054222:intron 55.0%
TGCCACGATTCTTGGAAGGG+CGG + chr6.1:27079363-27079382 MS.gene054222:intron 55.0%
TGGGAAAGATTCTTGCCCGC+GGG + chr6.1:27077574-27077593 MS.gene054222:CDS 55.0%
TGTCGGACCGTGTACAACAC+CGG - chr6.1:27073363-27073382 None:intergenic 55.0%
TGTGAGACCGGACATGACTC+CGG - chr6.1:27073162-27073181 None:intergenic 55.0%
TTCCGCCCTTCCAAGAATCG+TGG - chr6.1:27079368-27079387 None:intergenic 55.0%
! CTTCGTTGGTGAGAGCAAGG+TGG - chr6.1:27073073-27073092 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+TGG - chr6.1:27074308-27074327 None:intergenic 55.0%
! TGAAGCGTGAGGAGGTGTGT+GGG + chr6.1:27074544-27074563 MS.gene054222:intron 55.0%
! TGATGGAGCTCGTGCCATTG+AGG - chr6.1:27078542-27078561 None:intergenic 55.0%
! TGCCTTCGTTGGTGAGAGCA+AGG - chr6.1:27073076-27073095 None:intergenic 55.0%
!! GCTTTTGACTAGGTCCCCAC+AGG + chr6.1:27079269-27079288 MS.gene054222:intron 55.0%
!! GGTGACAGCTTAAGTTGGGG+CGG + chr6.1:27079109-27079128 MS.gene054222:intron 55.0%
!! GTGGAACGGTGCTGTTCACA+AGG - chr6.1:27077002-27077021 None:intergenic 55.0%
!! TGTGGCGGGCATATCTGAGA+AGG - chr6.1:27076863-27076882 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr6.1:27074332-27074351 MS.gene054222:intron 55.0%
CGTGGGCGAGATAGGCATAC+CGG + chr6.1:27079155-27079174 MS.gene054222:intron 60.0%
CTATGCTGGGCTGAAGCGTG+AGG + chr6.1:27074802-27074821 MS.gene054222:intron 60.0%
CTGCCTTACTATGGCCTCCC+TGG - chr6.1:27079588-27079607 None:intergenic 60.0%
GACTTGGGGGGCTACTGTTC+TGG + chr6.1:27077258-27077277 MS.gene054222:intron 60.0%
GCCCCCCAAGTCATTGCTCT+TGG - chr6.1:27077250-27077269 None:intergenic 60.0%
GTCGGACCGTGTACAACACC+GGG - chr6.1:27073362-27073381 None:intergenic 60.0%
GTGGGCGAGATAGGCATACC+GGG + chr6.1:27079156-27079175 MS.gene054222:intron 60.0%
TTGCGTACTGGGGAACGACG+AGG + chr6.1:27075878-27075897 MS.gene054222:CDS 60.0%
! CTGAAGCGTGAGGAGGTGTG+TGG + chr6.1:27074543-27074562 MS.gene054222:intron 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG + chr6.1:27073341-27073360 MS.gene054222:intron 60.0%
!! GCGTGTCCCGGTGTTGTACA+CGG + chr6.1:27073353-27073372 MS.gene054222:intron 60.0%
ACCGGGACACGCCTAATCCG+AGG - chr6.1:27073345-27073364 None:intergenic 65.0%
ACGCTTCAGCCCAGCCCAGT+GGG - chr6.1:27074532-27074551 None:intergenic 65.0%
TCCCGCATAGCCCACGCTTC+AGG + chr6.1:27074506-27074525 MS.gene054222:intron 65.0%
TGCTGGGCTGAAGCGTGAGG+AGG + chr6.1:27074805-27074824 MS.gene054222:intron 65.0%
! GCCTGAAGCGTGGGCTATGC+GGG - chr6.1:27074510-27074529 None:intergenic 65.0%
! GGCCTGAAGCGTGGGCTATG+CGG - chr6.1:27074511-27074530 None:intergenic 65.0%
! TGTGTCGGCGTGTCCGTGTC+CGG + chr6.1:27073588-27073607 MS.gene054222:intron 65.0%
ACGCTTCAGGCCCACTGGGC+TGG + chr6.1:27074519-27074538 MS.gene054222:intron 70.0%
AGCCCACGCTTCAGGCCCAC+TGG + chr6.1:27074514-27074533 MS.gene054222:intron 70.0%
AGCCCAGTGGGCCTGAAGCG+TGG - chr6.1:27074520-27074539 None:intergenic 70.0%
AGGAACTCGGCTGTGCCCGC+GGG - chr6.1:27077592-27077611 None:intergenic 70.0%
CACGCTTCAGCCCAGCCCAG+TGG - chr6.1:27074533-27074552 None:intergenic 70.0%
CAGGAACTCGGCTGTGCCCG+CGG - chr6.1:27077593-27077612 None:intergenic 70.0%
CGCTTCAGGCCCACTGGGCT+GGG + chr6.1:27074520-27074539 MS.gene054222:intron 70.0%
GCCCACGCTTCAGGCCCACT+GGG + chr6.1:27074515-27074534 MS.gene054222:intron 70.0%
GCCCAGTGGGCCTGAAGCGT+GGG - chr6.1:27074519-27074538 None:intergenic 70.0%
GGCTGGGCTGAAGCGTGAGG+AGG + chr6.1:27074536-27074555 MS.gene054222:intron 70.0%
TGACCACGTGCTCGGCGCGT+GGG + chr6.1:27079138-27079157 MS.gene054222:intron 70.0%
TTGACCACGTGCTCGGCGCG+TGG + chr6.1:27079137-27079156 MS.gene054222:intron 70.0%
! CTGGGCTGGGCTGAAGCGTG+AGG + chr6.1:27074533-27074552 MS.gene054222:intron 70.0%
GCTCGGCGCGTGGGCGAGAT+AGG + chr6.1:27079147-27079166 MS.gene054222:intron 75.0%
! TCGCCCACGCGCCGAGCACG+TGG - chr6.1:27079144-27079163 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 27073026 27079646 27073026 ID=MS.gene054222
chr6.1 mRNA 27073026 27079646 27073026 ID=MS.gene054222.t1;Parent=MS.gene054222
chr6.1 exon 27073026 27073260 27073026 ID=MS.gene054222.t1.exon1;Parent=MS.gene054222.t1
chr6.1 CDS 27073026 27073260 27073026 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27073649 27073725 27073649 ID=MS.gene054222.t1.exon2;Parent=MS.gene054222.t1
chr6.1 CDS 27073649 27073725 27073649 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27075441 27075524 27075441 ID=MS.gene054222.t1.exon3;Parent=MS.gene054222.t1
chr6.1 CDS 27075441 27075524 27075441 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27075643 27075756 27075643 ID=MS.gene054222.t1.exon4;Parent=MS.gene054222.t1
chr6.1 CDS 27075643 27075756 27075643 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27075870 27075953 27075870 ID=MS.gene054222.t1.exon5;Parent=MS.gene054222.t1
chr6.1 CDS 27075870 27075953 27075870 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27076071 27076142 27076071 ID=MS.gene054222.t1.exon6;Parent=MS.gene054222.t1
chr6.1 CDS 27076071 27076142 27076071 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27076585 27076652 27076585 ID=MS.gene054222.t1.exon7;Parent=MS.gene054222.t1
chr6.1 CDS 27076585 27076652 27076585 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27077566 27077653 27077566 ID=MS.gene054222.t1.exon8;Parent=MS.gene054222.t1
chr6.1 CDS 27077566 27077653 27077566 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27077753 27077826 27077753 ID=MS.gene054222.t1.exon9;Parent=MS.gene054222.t1
chr6.1 CDS 27077753 27077826 27077753 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27077914 27078283 27077914 ID=MS.gene054222.t1.exon10;Parent=MS.gene054222.t1
chr6.1 CDS 27077914 27078283 27077914 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27078524 27078591 27078524 ID=MS.gene054222.t1.exon11;Parent=MS.gene054222.t1
chr6.1 CDS 27078524 27078591 27078524 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
chr6.1 exon 27079589 27079646 27079589 ID=MS.gene054222.t1.exon12;Parent=MS.gene054222.t1
chr6.1 CDS 27079589 27079646 27079589 ID=cds.MS.gene054222.t1;Parent=MS.gene054222.t1
Gene Sequence

>MS.gene054222

ATGACGTATGGAACCATTTTTAATGCGTTGACTATTAGTAGTAACCACCTTGCTCTCACCAACGAAGGCATACCTTTTGGATCTGCAACATGGATTGCTTACGCCGGAATATGCTGTTTTCTTGTTCTCTTTGCCGGAGTCATGTCCGGTCTCACACTTGGTCTCATGTCTCTCAGTCTTGTAGACCTTGAAATTCTTGAACGTAGTGGTTCTCCTTCTCAGAAAAAACAAGCTGGTAGTTACTTAATCCTCTTCCTCTTAACCCAATAGTTTCTTTAATTATTTAGTTAATAGTATTATATGAAACACGGACACTCCTCGGATTAGGCGTGTCCCGGTGTTGTACACGGTCCGACACACTTGTAATTACACTGAATTATATGAATTATGTGATTTTTTCAAATTATATTAGTTTCTTTAATTATTTAGTTAATATTCACGGACAGTCCTCGGATTAGGCGTGTCCCGGTGTCATGCGATGTCCAACACGGACACTTGTAATTACAACAATGAATTATAATTACACTGAATTATATGATTTTTTTTTTTTCAAATTATTTACTGTGTCGGCGTGTCCGTGTCCGGTGTCCGTATCAGTGCTTCATAAATTTCATCTTATGCAGCGATCATTCTTCCGGTGGTTAAAAAGCAACACCAGCTTCTTGTTACTCTGCTTCTCTGTAATGCTGTTTCTATGGAGGTAATTCAATTTCAATATAATTATATTGACCTTTTTTTTTTTTGGTACATAATTATATTGACTTATTTGAGTAGTTTATCTATTTACATTAACACTTGTGAGATCCTTTGTTTGTTTGAAAGCTTTTTTCAACTAGTTTCTATAATCTTTCCATGATAGCTTATAAGAAAATAGTTTGACTTTATTTTATGTTTTGTTATAGAAATAGCTTATACAAATTGATAAGCGCTTATTCTCTAAATATTTAATGGTAAGTGCTTGTGCTATAAGCTCAAACAATTTTTTAAAAAGGCTTAATTACACTTTTGGCCCCCTAAGTTTTCCAAAGTTGTGATTTTGGCTCCCCTAAAAAAACAACTCTTTTCAAGCCCCCTAAGTTTACTTTCTGTTGCAATTTTAGCCCCTCATGCCAATTTCCCTAAGTTTACTTTCCAGGCCCCTTAATTTTGAGTCAAAAAGTAAACTTAGGGGGCTAAATTTAGGCTTATTTTATTACTCTTTTTTTCAAATATACTCTGTTGGAAATTCCGCCTTAATTGTGGTTCTCCCCTAGTCGCCTAAATTGCGACCTTTGGTTTGCCATCATTGCAGCCTCCAACACCTTCATTGTGTTGGCTTTGAGGGGGTGGATTTAGTCCCACATCGGATAGTTAGGACTCTTGAGAAGAGTTTATAAAGAGGAGACACTCCTCACCTTACAAGCTGGTTTTGTAAGGATGAGTTAAGCACCAAATTTCAACATGGTATCAGAGCTTATCCTAGATCTATCATCAATGGGCTTCCCGCATAGCCCACGCTTCAGGCCCACTGGGCTGGGCTGAAGCGTGAGGAGGTGTGTGGGAAATTCCGCCTTAATTGTGGTCCTTCCCTAGTCACCTTAATTGCCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCTCCAAATTTCAACATACCCCGTATTAATACTATCAATTTTTCAACATACCCCGTATTAATACTATCAATTGAGTCACCTTAATTGCCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCTCCAAATTTCAACATACCCCGTATTAATACTATGCTGGGCTGAAGCGTGAGGAGGTGTGTGGGAAATTCCGCCTTAATTGTGGTCCTTCCCTAGTCACCTTAATTGCCTCACCTTACAAGCCGTTTCAACATACCCCGTATTAATACTATCAATTTTTCAACATACCCCCGTATTAATACTATCAATTGAGTCACCTTAATTGCCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCTCCAAATTTCAACATACCCCGTATTAATACTATGCTGGGCTGAAGCGTGAGGAGGTGTGTGGGAAATTCCGCCTTAATTGTGGTCCTTCCCTAGTCACCTTAATTGCCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCTCCAAATTTCAACATACCCCGTATTAATACTATCAATTGACTTGAAATATGAAAAAGTAACATTGAATACATTTATATACAAAGGGTAATTTAGTAATAATTGCATTTTTGTGATAAATTTATTACTCCAACAACTTTTCTTAATACCTGTAAATGTTCTGATAAAAAGGGACGGTGGGAGTTCTTCATTTTGATTTTGTTTAAACTTTACAGTTTACACTGATTCCCTAAACCTGCCTAACTCTTTGACAGCCATTGGCTTTCAAATGTACAATATGCAGGCTCTTCCTCTATACCTAGATAAACTCTTCAATCAAGTTCTTGCAATCATTCTCTCTGTTACTTTCGTTCTTTTTTTTGGTGAGGTATGTCATTTTTTCGCTATCTTTGCTGTTCACTGGTTTAGTATCAATTTTTTTACCTAAGCAATTTTATGAAGTTCTTTTTCCAATTAATAATAATAACTTGTCTTTCTAATTGCAGGTTATTCCACAAGCAATTTGTAGTAGATATGGTCTCGCTGTAGGTGCCAACTTTTCATGGCTTGTGCGTATTTTAATGATTATATGTTACCCTCTTTCTTATCCGGTTGGAAAGGTAAATTCTACTATATAGTACAGATGTTGTTCCATGGCATCAAGCTCTGGCTATTCTCGTATATAGACGATGGCATCACCGAAAACTACCTATCCAACGAATATTTGTTTCAGGTTCTGGATTGCGTACTGGGGAACGACGAGGCTTTATTTAGGCGTGCTCAGTTAAAAGCTCTTGTCTCCATTCATGGCATGGAGGTATAAATGAATATTCTTTTTAGTGAACAAAATAAGTCTTGTCGACTTTGGTGAAGCTTCTCAACTATTTGATTTTTTGTGTTAGATTCATAATCATTTAACCTGCTTGTTTTTTAGGCTGGGAAAGGGGGCGAACTTACACATGATGAGACAACAATTATCAGTGGAGCACTTGATTTGACCGAAAAGGTAAGTGCTGCAATTCACCTTTCACAATCAATTGTGAACCTAATTTTTGTGTTTTCTTAATGTCAATACGATACAAATTTTCAATATATGATATTCAATCCAGCAGAATATGAAGTTTCTTACCTGTCTTGAGTTTTAACTAGTGTCTTCTATTTGGGCACGCTGGGAAGCATCAATGATGTTGGAAATGGAATAAGGGAACTGGTGTTTATTAAATATTTATCAATGTGCCATGCGGTGTTATTCCAAAACTCACCGTTCACTTCCAGTGATCATGTGTTCCGTTAGTCATACATTCTCGTGCATACTTGGGTTCTCTCTATGTTTTGGTTCATTATTAACTATATCATGCTGTAAACCATATGTTTGTATAAAGAGCATATTTAAATTTAATGCGTTATTTTTCCATCTAGTAATTTCTATGTTTTGTGTTTTTGAACAGACTGCTGAGGAGGCTATGACTCCTATTGAATCAACATTTTCTTTAGATGTTAATTCAAAGTTGGACTGGTAAGCTTTCTTAGTTTCTTTGTTGTTATTCTTCAGTATGTTAGGCTTCCAACAAATGACTGAATTGGCTCTGAATCTGCTCGTCCATGATAGAATTTGTGCGGCATACCTTTGTGAACAGCTCCGTTCCATCGCAAGTATGCTCGCCACTCAATCAGCTCGATCATGGTAGAATTTGTGCGGCATACCTTTGTGAACAACACCGTTCCTTCTCAGATATGCCCGCCACATAGTCGTAGCTACCATGGCAGAACTTGTGAGGCATACCTTTGTGAACTGCCCCGTTCTATCACAGGTATGCCCGCTACATGATCATTGCGACCATGGTAGAACTTGTGAGGCATTCCCTTGTGAACAGCACCGTTCCACCATATGAATACCCACTAGATGATCGTTTCAACCATGGTAGAACTTGTGAGGCATTCCCTTGTCAACTGTACCGTCTCACTGCGAACATGCTCAATCTATCACAGGCACACACCACTGGTACGAACATGTTCCTCACACGTCTAAAAAATTCAAACATCCGGGGATTATCCCTTCTAAGTGCTCACATGAGCAGTTGCCTCGCCCCTACAAAGTCATCACTCTTTACCAAGAGCAATGACTTGGGGGGCTACTGTTCTGGACCGAGCAAATCATTTAGGGCCGATACAAAACAAGATTTTTATATGTTCTGAAAATGACTTTTCTATTTGTCCAAGATTTCATTTTCTTCCTCTTTATAGACAATTTCTTTTTAGCAACACCAATTACTAGACTATTGGAAAATATTTATTGTTGTTTCCCTCAAACTAGTAGGATCCACCCCTACATATAAGATATATGCAAAACATATGCGTGGAGTAGAATCGTGTTTTTCGTCCACTATTTTATTTTCCTGAAAACTTTTATCCTGCCTATCTCAAATCAGGGAGGCATTGGGAAAGATTCTTGCCCGCGGGCACAGCCGAGTTCCTGTCTATTCTCAAAATCCCAGGAATATTATTGGGCTTTTAATTGTGTGTATTTTTCTAAATTTTGACTTTATTTACATTATCTCAATCCTTTTAGGTTCTTTTTTCGTCACATGTTTGTTTTTTCTTTTTATAAATAATTAGGTAAAAAATCTTCTTACTGTTAGACCTGAATCAGAGACCCCTGTCAGTGCAGTATCTATCCGGAGAATACCACGGTGTGTTTTTATAAATTTATTCTCGTCGCGGTCTTCCAAACAAACTGTGAAAAATTCCAATTTATTTTTAATGGTATATATTTGCAGGGTTCCATCTGATATGCCTCTATACGATATACTGAACGAGTTCCAAAAGGGAAATAGTCATATGGCTGCTGTTGTGAAGACTACCGGAAAAGGCAAAGAAACTCCGCAACTAATTGATGAAGAGAAATTTGATGCAAAGAAAAATGTTGGTGGGGATTCACAGTTAACTACTCCATTGCTACAAGAACTGGATTCGAAATCAGAAAATGTTGTTGTTGACATTGTCAAGCCTTCAAAGCTTACTGGCAATAATAAGCAAACTAGTTTGCAGAGTAGTGATGGCACATTAAGCGGTCCTTCTTACGAAAATATTCATGGTGAAGTGATTGGTATTATCACTTTGGAAGATGTATTTGAAGAACTCTTGCAAGTAAATTTCTGTCATTTTAGATATGTGCATGCCCTTGGTTTTTAGTATTTCTTCTGCACAGAAAACTGAATGAAATTATCTCTTGGATGCAGGAAGAAATTGTGGATGAGACAGATGAATATGTTGACGTTCATAACAGGTAATAGAGACTAGATACTATACACAAGTGATATGGATGAAATTGCTGTAAATTTGAATTTTAATGTTGTATAATTTTATTTTGCAGAATACGTGTTGCAGCAGTTGCAGCTGCTTCCTCAATGGCACGAGCTCCATCAATCCGAAAGTCGACTGAAAAAAAGGGATCAGTAAGTGGTTTAATATTACACTATTTTAATATTTGTTTCTCTGCTATAGTTCCCAAATGAAATCAACTTTCCTATTGAGCTGAGAAAATGCTTCATTTTTGGGCCTCGGGTCTTGAACTTTTCGTGTTTCTCTGTTGTATGGTATATTTCTCATGTAATTCTAAACTTGAATTGAAGGGATTTATATCTTAGTCTAAGCATATCTCTTCTTCCATTAAAAGCATTAAGCACAAATAATTTTTGAGATTTTAAAACAATATTATAGGAATTCAAACTCTGCCATGAAAATTCCAGCCTTATATTCCAGAAAGGCATTGCTTGTCCAAGTCATATTTAATTCAACAATAAATTAGTTCAAGCATTATCTTTTAATTATACAGTTAAGTGAAGGATAAATAGTTGTGATCTATACCTCAATATCTTAAGAATTAACTCTTGGCCCATCATAAGAAATATAGCCCAATACCCCTCTGCCATAATGGACATAGCCCAACATCACATAGTCACATGAGAGAAAGGTGACAGCTTAAGTTGGGGCGGTCGAATTGACCACGTGCTCGGCGCGTGGGCGAGATAGGCATACCGGGAAAAAAATCTCGGAGGAGGCTCTCTTGTCATGACCCGTAAAGGAACGGAGTCTAGTGACCCATATCCGAGATGGATTCGGAGGCCATTACGCTTTTGACTAGGTCCCCACAGGATAAACACGTGATACTGACTAAGTCTCAAGAGGGTAAGCGGGAAAGGACGGAATCACGGATAAAGGCTACATGCCACGATTCTTGGAAGGGCGGAATCTTGCACTAACAGTCCTTATCCGAGATTAAGCATATAGCTGTTGTCTTTTTGTATCAGTTGTGACTATGATTAACATTTAGTTTCATATTTCACCTCTCAAACCCTTTGTAATAATTTTCTTGATTTGCTTGAAAAGGCCGTTTTACTAAACTCTCCAACATGGATGCTAATTGTTTTTTGTTTGTTTTTAACCATCCAGGGAGGCCATAGTAAGGCAGTGCAAACTTCAAAGTTATCTTGAGAGGAAAATGGATTGA

Protein sequence

>MS.gene054222.t1

MTYGTIFNALTISSNHLALTNEGIPFGSATWIAYAGICCFLVLFAGVMSGLTLGLMSLSLVDLEILERSGSPSQKKQAAIILPVVKKQHQLLVTLLLCNAVSMEALPLYLDKLFNQVLAIILSVTFVLFFGEVIPQAICSRYGLAVGANFSWLVRILMIICYPLSYPVGKVLDCVLGNDEALFRRAQLKALVSIHGMEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEALGKILARGHSRVPVYSQNPRNIIGLLIVKNLLTVRPESETPVSAVSIRRIPRVPSDMPLYDILNEFQKGNSHMAAVVKTTGKGKETPQLIDEEKFDAKKNVGGDSQLTTPLLQELDSKSENVVVDIVKPSKLTGNNKQTSLQSSDGTLSGPSYENIHGEVIGIITLEDVFEELLQQLQLLPQWHELHQSESRLKKRDQEAIVRQCKLQSYLERKMD