Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43223.t1 | XP_013457848.1 | 99 | 960 | 10 | 0 | 1 | 960 | 1 | 960 | 0.00E+00 | 1870.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43223.t1 | Q8GUL2 | 73.2 | 957 | 252 | 2 | 1 | 957 | 1 | 953 | 0.0e+00 | 1392.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43223.t1 | A0A072UQ05 | 99.0 | 960 | 10 | 0 | 1 | 960 | 1 | 960 | 0.0e+00 | 1870.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43223 | MS.gene014807 | PPI |
| MS.gene43223 | MS.gene014808 | PPI |
| MS.gene072925 | MS.gene43223 | PPI |
| MS.gene32605 | MS.gene43223 | PPI |
| MS.gene43223 | MS.gene32606 | PPI |
| MS.gene072926 | MS.gene43223 | PPI |
| MS.gene072924 | MS.gene43223 | PPI |
| MS.gene32604 | MS.gene43223 | PPI |
| MS.gene014809 | MS.gene43223 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43223.t1 | MTR_4g107290 | 98.958 | 960 | 10 | 0 | 1 | 960 | 1 | 960 | 0.0 | 1959 |
| MS.gene43223.t1 | MTR_4g107290 | 98.164 | 817 | 15 | 0 | 1 | 817 | 1 | 817 | 0.0 | 1659 |
| MS.gene43223.t1 | MTR_7g084880 | 24.284 | 943 | 575 | 35 | 1 | 877 | 1 | 870 | 3.79e-37 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43223.t1 | AT5G62600 | 73.250 | 957 | 252 | 2 | 1 | 957 | 1 | 953 | 0.0 | 1444 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTGACGGCGCCTTTC+TGG | 0.098576 | 8.4:-19596251 | None:intergenic |
| ACCACTTCTACTCGAGATTT+TGG | 0.179131 | 8.4:-19608020 | None:intergenic |
| GATCTTAAGCATACTAAATT+TGG | 0.179535 | 8.4:+19600808 | MS.gene43223:CDS |
| ACCAATTATATCTCCTTTAC+AGG | 0.182837 | 8.4:+19604081 | MS.gene43223:CDS |
| CATTACCTGTCTGGAGTAAC+TGG | 0.218231 | 8.4:-19602687 | None:intergenic |
| TTCCAGCATTACCAGAATTT+TGG | 0.218743 | 8.4:+19607974 | MS.gene43223:CDS |
| CTGCTGCTGCTTTGGCGTTT+AGG | 0.220108 | 8.4:+19602991 | MS.gene43223:CDS |
| ACAGATGCTGCTTCAGTTCT+TGG | 0.226644 | 8.4:+19601693 | MS.gene43223:CDS |
| TGCACGTGCCTGCGCAAGAC+TGG | 0.241497 | 8.4:+19595321 | MS.gene43223:CDS |
| GAGACCACTCGAGTTGAATT+TGG | 0.268394 | 8.4:+19608394 | MS.gene43223:CDS |
| GATACCTGAGTTCTGACTTT+TGG | 0.279308 | 8.4:-19595151 | None:intergenic |
| CTATTGGAGCTTATTCAAAA+TGG | 0.281015 | 8.4:+19602880 | MS.gene43223:CDS |
| GGTGATGGTAGAGTGCATTT+AGG | 0.282469 | 8.4:-19594226 | None:intergenic |
| TGTTTCTAGGTGAGAACTTC+TGG | 0.284504 | 8.4:+19605359 | MS.gene43223:intron |
| ATGCGCAGCTGCTGCTGCTT+TGG | 0.293069 | 8.4:+19602983 | MS.gene43223:CDS |
| TCTCTCTAGTGAAGTTATAA+AGG | 0.317495 | 8.4:+19605466 | MS.gene43223:CDS |
| CTTTCAGAGGCATCTGTAAA+TGG | 0.322558 | 8.4:+19597242 | MS.gene43223:CDS |
| AGAATATATACCAGGATTCT+TGG | 0.327641 | 8.4:+19595394 | MS.gene43223:CDS |
| CTTCTATGACATTTAACTTC+TGG | 0.332488 | 8.4:+19600203 | MS.gene43223:CDS |
| GGTTGTTACTGAACTTCCTT+TGG | 0.333623 | 8.4:+19604024 | MS.gene43223:CDS |
| ATGTACTCATTCCGTTCATT+AGG | 0.336162 | 8.4:-19602953 | None:intergenic |
| TTTGAGTATTGCTGAGCTTA+AGG | 0.344690 | 8.4:+19596325 | MS.gene43223:CDS |
| AAACAATCATCTGCTATATC+AGG | 0.347089 | 8.4:-19607168 | None:intergenic |
| GATCTGGCAAACACCACAAC+GGG | 0.351236 | 8.4:+19607906 | MS.gene43223:CDS |
| ACCTGTAAAGGAGATATAAT+TGG | 0.353065 | 8.4:-19604082 | None:intergenic |
| CCGGCGCAATAGAGCAGTTC+AGG | 0.359465 | 8.4:+19608352 | MS.gene43223:CDS |
| TAATGAAGCAACCAAAATTC+TGG | 0.361242 | 8.4:-19607985 | None:intergenic |
| AAGCTTTGTGGATGCCTAGA+TGG | 0.364173 | 8.4:+19603814 | MS.gene43223:CDS |
| TTCAGTTGAACTTAACTAGA+AGG | 0.365216 | 8.4:+19600233 | MS.gene43223:CDS |
| TTAGTTGATTGCTCTATGAT+TGG | 0.367385 | 8.4:+19607258 | MS.gene43223:CDS |
| ATCAGAAAAGAAATGCAATA+TGG | 0.369741 | 8.4:-19607877 | None:intergenic |
| CAAAGTTTCTAGGTTGCTAC+TGG | 0.372507 | 8.4:-19594709 | None:intergenic |
| CTGGCATTAACTCGATCATA+TGG | 0.372635 | 8.4:+19608167 | MS.gene43223:CDS |
| AACAAAATATCAAAGTTTCT+AGG | 0.379466 | 8.4:-19594719 | None:intergenic |
| GCGCCTTCTCACAAGTATTC+AGG | 0.382690 | 8.4:+19607047 | MS.gene43223:CDS |
| AACTCCCTCCCACAGCGTTC+CGG | 0.384679 | 8.4:+19594903 | MS.gene43223:CDS |
| AAAGAAATGCAATATGGAAT+TGG | 0.385953 | 8.4:-19607871 | None:intergenic |
| GTGATGGTAGAGTGCATTTA+GGG | 0.387500 | 8.4:-19594225 | None:intergenic |
| GAAAGATCTTGATAATCTTC+AGG | 0.390550 | 8.4:-19600769 | None:intergenic |
| AAGAGCTCTCAGATGTTTGC+CGG | 0.394363 | 8.4:+19608333 | MS.gene43223:CDS |
| AAGAATCCTGGTATATATTC+TGG | 0.399730 | 8.4:-19595392 | None:intergenic |
| TCTTTCGTCTGAGGACCTTA+AGG | 0.403410 | 8.4:+19600786 | MS.gene43223:CDS |
| TAGTTGATTGCTCTATGATT+GGG | 0.404013 | 8.4:+19607259 | MS.gene43223:CDS |
| TTGAATTAACGGCGCATTAG+TGG | 0.404670 | 8.4:-19598661 | None:intergenic |
| GCTTTCAGGACCTTGATTGA+TGG | 0.405761 | 8.4:-19604188 | None:intergenic |
| GTTAATAGTGCATGCATTGT+TGG | 0.409191 | 8.4:+19600150 | MS.gene43223:CDS |
| AAAAGAGCTTACTTCTCAAA+TGG | 0.411218 | 8.4:+19596274 | MS.gene43223:CDS |
| TGCTAGGTTATTTGCGGACA+TGG | 0.415362 | 8.4:+19599936 | MS.gene43223:CDS |
| GCACGTGCCTGCGCAAGACT+GGG | 0.418882 | 8.4:+19595322 | MS.gene43223:CDS |
| TGGGGTACAGGAGGAAGTTT+CGG | 0.420153 | 8.4:-19602667 | None:intergenic |
| TAGTATGCTTAAGATCCTTA+AGG | 0.420919 | 8.4:-19600801 | None:intergenic |
| GAGAACTTCTGGAAGGTTCA+TGG | 0.424071 | 8.4:+19605370 | MS.gene43223:CDS |
| TTCATTACCATATGAAATAT+AGG | 0.426064 | 8.4:-19600345 | None:intergenic |
| AAGTCTGTGACAGCAGTTGA+TGG | 0.427316 | 8.4:-19608233 | None:intergenic |
| ACATCTGAGAGCTCTTCAAT+TGG | 0.428842 | 8.4:-19608326 | None:intergenic |
| AAAATGTGTACCCATGCTTT+AGG | 0.430489 | 8.4:-19596498 | None:intergenic |
| TTCTTGAGGCATTTGCTTCG+TGG | 0.431107 | 8.4:+19596470 | MS.gene43223:CDS |
| GACAGTGCTTTGAAGCTCCA+TGG | 0.434817 | 8.4:-19594195 | None:intergenic |
| TGCATGCGAACGGTATCATC+AGG | 0.435786 | 8.4:-19594248 | None:intergenic |
| GCACTTTCAGATGTGGCATC+TGG | 0.443570 | 8.4:+19608278 | MS.gene43223:CDS |
| ATAGAAGCAATATCATATTC+TGG | 0.450197 | 8.4:-19600187 | None:intergenic |
| GACAGTGCTGTGAGAACTAA+TGG | 0.450318 | 8.4:-19597200 | None:intergenic |
| AGAACTTCTGGAAGGTTCAT+GGG | 0.457679 | 8.4:+19605371 | MS.gene43223:CDS |
| GGCAATTGCTAGGTTATTTG+CGG | 0.458595 | 8.4:+19599930 | MS.gene43223:CDS |
| GCTCACAATTGGTGCAATGC+TGG | 0.461031 | 8.4:+19605394 | MS.gene43223:CDS |
| TACGTGGAACTGATTGCAAC+TGG | 0.463073 | 8.4:+19599967 | MS.gene43223:CDS |
| TGCTGAAGACTCGTTGCACC+TGG | 0.470441 | 8.4:+19603891 | MS.gene43223:CDS |
| CAAAACAAAGCAGCTTCTGC+TGG | 0.471354 | 8.4:-19602070 | None:intergenic |
| TGGGATGCTAGCACTGGAAT+GGG | 0.471724 | 8.4:+19608187 | MS.gene43223:CDS |
| ATGAGAACTAAGAACAGATC+CGG | 0.472088 | 8.4:-19597177 | None:intergenic |
| CAGATGCTATCCAACGGCTT+TGG | 0.472208 | 8.4:+19604405 | MS.gene43223:CDS |
| ATCAACTGCTGTCACAGACT+TGG | 0.474184 | 8.4:+19608235 | MS.gene43223:CDS |
| AGGGAGTCCTATATTTCATA+TGG | 0.477422 | 8.4:+19600338 | MS.gene43223:intron |
| GTGGAATAGTGAAATGGCTC+AGG | 0.479123 | 8.4:+19595351 | MS.gene43223:CDS |
| TTATCGATGCCAGTCGTGCT+TGG | 0.479355 | 8.4:+19604564 | MS.gene43223:intron |
| TATCGATGCCAGTCGTGCTT+GGG | 0.481166 | 8.4:+19604565 | MS.gene43223:intron |
| AGGTTCATGGGGCTCACAAT+TGG | 0.484154 | 8.4:+19605383 | MS.gene43223:CDS |
| TAGCATTGCAGTGGCTGCAT+TGG | 0.487025 | 8.4:+19595295 | MS.gene43223:CDS |
| ATCATATGGGATGCTAGCAC+TGG | 0.492621 | 8.4:+19608181 | MS.gene43223:CDS |
| TAATAGTAGTAATGAACAAA+AGG | 0.493694 | 8.4:+19602039 | MS.gene43223:CDS |
| TCGTGGCTTCGCCTAAAGCA+TGG | 0.493975 | 8.4:+19596487 | MS.gene43223:CDS |
| CTACTTGAAGAATTTGATTG+AGG | 0.495952 | 8.4:+19607005 | MS.gene43223:CDS |
| ATAATTATACTATCTCTGAT+TGG | 0.500717 | 8.4:-19607942 | None:intergenic |
| GGAACAATGACTTGAATTAA+CGG | 0.501505 | 8.4:-19598672 | None:intergenic |
| GTTTGTTCCACATCTACAAT+CGG | 0.503725 | 8.4:+19603836 | MS.gene43223:CDS |
| ATGGGATGCTAGCACTGGAA+TGG | 0.505235 | 8.4:+19608186 | MS.gene43223:CDS |
| CACGTGCCTGCGCAAGACTG+GGG | 0.505660 | 8.4:+19595323 | MS.gene43223:CDS |
| TCTACAATCGGACAGTTAGC+GGG | 0.506008 | 8.4:+19603848 | MS.gene43223:CDS |
| TCCTGGTATATATTCTGGAT+TGG | 0.507557 | 8.4:-19595387 | None:intergenic |
| TCAGGTGTCTTACACACTAC+TGG | 0.508893 | 8.4:+19608148 | MS.gene43223:intron |
| ACTTATTGAAGATGTTTCAC+AGG | 0.512750 | 8.4:+19595122 | MS.gene43223:CDS |
| AACCAAAATTCTGGTAATGC+TGG | 0.513710 | 8.4:-19607976 | None:intergenic |
| GTCTGGAGTAACTGGGGTAC+AGG | 0.514698 | 8.4:-19602679 | None:intergenic |
| TCCAAAATCTCGAGTAGAAG+TGG | 0.516359 | 8.4:+19608019 | MS.gene43223:CDS |
| ATAGGTTCAACGAGACTTTG+AGG | 0.517531 | 8.4:+19594880 | MS.gene43223:intron |
| ATCATCTGCTATATCAGGCC+GGG | 0.517909 | 8.4:-19607163 | None:intergenic |
| CGCAGTGGCCGGAACGCTGT+GGG | 0.518600 | 8.4:-19594911 | None:intergenic |
| CACCAGGAAGCCATCAATCA+AGG | 0.520597 | 8.4:+19604178 | MS.gene43223:intron |
| ACGAACTCTCGATGCGTGGC+AGG | 0.521472 | 8.4:+19594298 | MS.gene43223:CDS |
| TTATGAGTCACTTGTATCAC+TGG | 0.524132 | 8.4:+19600418 | MS.gene43223:CDS |
| CTTAAAAGCACTTTCAGATG+TGG | 0.524206 | 8.4:+19608271 | MS.gene43223:CDS |
| ACTGCAGCAGGAAACATTGA+TGG | 0.524667 | 8.4:+19598633 | MS.gene43223:CDS |
| CGTGGCTTCGCCTAAAGCAT+GGG | 0.525982 | 8.4:+19596488 | MS.gene43223:CDS |
| GTAAGTAACTCCAAGAATCC+TGG | 0.526444 | 8.4:-19595404 | None:intergenic |
| AGATGTGGAACAAACCATCT+AGG | 0.527298 | 8.4:-19603828 | None:intergenic |
| TGGCATTAACTCGATCATAT+GGG | 0.528627 | 8.4:+19608168 | MS.gene43223:CDS |
| CTGGTAATGCTGGAACCTCT+AGG | 0.529849 | 8.4:-19607966 | None:intergenic |
| ATTAGGATATCTAAAACTGA+AGG | 0.531489 | 8.4:-19602936 | None:intergenic |
| TATTGCTGAGCTTAAGGAGC+AGG | 0.531789 | 8.4:+19596331 | MS.gene43223:CDS |
| TTGATACACTACACTGCAGC+AGG | 0.533207 | 8.4:+19598621 | MS.gene43223:CDS |
| GCGTTTAGGCACATCTGTGA+TGG | 0.535100 | 8.4:+19603005 | MS.gene43223:CDS |
| AGACAGACACTAACCTGTAA+AGG | 0.539733 | 8.4:-19604094 | None:intergenic |
| TTCTCAAACCTTGAGAAGCA+AGG | 0.540410 | 8.4:+19594740 | MS.gene43223:CDS |
| AGAGATAAAGAAAGCATGGC+TGG | 0.541269 | 8.4:-19605448 | None:intergenic |
| ACGTGCCTGCGCAAGACTGG+GGG | 0.542065 | 8.4:+19595324 | MS.gene43223:CDS |
| TGAGAAGGCGCGTTGTGTGC+CGG | 0.542492 | 8.4:-19607035 | None:intergenic |
| GAATTCTGAGCTACTTTCAG+AGG | 0.544543 | 8.4:+19597229 | MS.gene43223:CDS |
| TAGAATCACCTTGCTTCTCA+AGG | 0.546247 | 8.4:-19594748 | None:intergenic |
| TCGAAGCTGAGAGAAATAAG+AGG | 0.546761 | 8.4:+19600375 | MS.gene43223:CDS |
| TTCAAGTAGTCAGCACAAGA+TGG | 0.546980 | 8.4:-19606991 | None:intergenic |
| ATTTCTTGTTTCAGCTGTTG+CGG | 0.548666 | 8.4:+19601662 | MS.gene43223:intron |
| ACATTTCTTTCAGGTTCTTG+AGG | 0.549075 | 8.4:+19596456 | MS.gene43223:intron |
| GCTCTTCAATTGGAACAGAT+AGG | 0.551551 | 8.4:-19608316 | None:intergenic |
| GATTTAAGATTCATAACTTG+AGG | 0.553612 | 8.4:-19598693 | None:intergenic |
| TTAATGAGTCACGCAGTGGC+CGG | 0.554229 | 8.4:-19594922 | None:intergenic |
| AATCATCTGCTATATCAGGC+CGG | 0.556123 | 8.4:-19607164 | None:intergenic |
| ACAGTGCTTTGAAGCTCCAT+GGG | 0.558174 | 8.4:-19594194 | None:intergenic |
| AGGAGGAAGTTTCGGAAGCA+AGG | 0.561915 | 8.4:-19602659 | None:intergenic |
| CTAGAGAGATAAAGAAAGCA+TGG | 0.562240 | 8.4:-19605452 | None:intergenic |
| TGAGAGAAATAAGAGGCTGC+AGG | 0.564111 | 8.4:+19600382 | MS.gene43223:CDS |
| CCTGAACTGCTCTATTGCGC+CGG | 0.564941 | 8.4:-19608352 | None:intergenic |
| ATCTACAATCGGACAGTTAG+CGG | 0.565539 | 8.4:+19603847 | MS.gene43223:CDS |
| GAAATGGCTCAGGGATGAGA+TGG | 0.566339 | 8.4:+19595361 | MS.gene43223:CDS |
| TGCTGCAGGAATTCACAGCC+CGG | 0.568216 | 8.4:+19607145 | MS.gene43223:intron |
| GTCTTGCGCAGGCACGTGCA+CGG | 0.569298 | 8.4:-19595318 | None:intergenic |
| GATGCTGCTTCAGTTCTTGG+TGG | 0.569638 | 8.4:+19601696 | MS.gene43223:CDS |
| TGAGAACTAAGAACAGATCC+GGG | 0.570000 | 8.4:-19597176 | None:intergenic |
| TCCAATCCAGAATATATACC+AGG | 0.571375 | 8.4:+19595386 | MS.gene43223:CDS |
| CTTATTGAAGATGTTTCACA+GGG | 0.574106 | 8.4:+19595123 | MS.gene43223:CDS |
| GCTAGGTTATTTGCGGACAT+GGG | 0.577306 | 8.4:+19599937 | MS.gene43223:CDS |
| GGGATGGTGGAATAGTGAAA+TGG | 0.577712 | 8.4:+19595345 | MS.gene43223:CDS |
| ATAGCATCTGCCACAACTTG+AGG | 0.577992 | 8.4:-19604392 | None:intergenic |
| ACGCAGTGGCCGGAACGCTG+TGG | 0.578195 | 8.4:-19594912 | None:intergenic |
| AGTGGCCGGAACGCTGTGGG+AGG | 0.579145 | 8.4:-19594908 | None:intergenic |
| TTATCAAGATCTTTCGTCTG+AGG | 0.579528 | 8.4:+19600777 | MS.gene43223:CDS |
| AAAGTTTCTAGGTTGCTACT+GGG | 0.580198 | 8.4:-19594708 | None:intergenic |
| GAACGGTATCATCAGGGTGA+TGG | 0.581180 | 8.4:-19594241 | None:intergenic |
| TGCACCTGGTTGAAGCCTTG+AGG | 0.582099 | 8.4:+19603905 | MS.gene43223:CDS |
| GCATCTGGAGGTGATACAAA+TGG | 0.587002 | 8.4:+19608293 | MS.gene43223:CDS |
| TGATGCTAAGAGAGCTCTTG+AGG | 0.587110 | 8.4:+19604048 | MS.gene43223:CDS |
| TGAAGCAGAAGTAATGCCTC+AGG | 0.588060 | 8.4:+19602126 | MS.gene43223:CDS |
| GTGGCCGGAACGCTGTGGGA+GGG | 0.589687 | 8.4:-19594907 | None:intergenic |
| ATTACCTGTCTGGAGTAACT+GGG | 0.589791 | 8.4:-19602686 | None:intergenic |
| AAAATTCTGAAGAAAGCGAT+CGG | 0.591927 | 8.4:-19594273 | None:intergenic |
| TCTAGGTGAGAACTTCTGGA+AGG | 0.592234 | 8.4:+19605363 | MS.gene43223:intron |
| AAGACGTGAAGGCAATTGCT+AGG | 0.592247 | 8.4:+19599920 | MS.gene43223:CDS |
| GTAGTAATGAACAAAAGGAA+TGG | 0.592630 | 8.4:+19602044 | MS.gene43223:CDS |
| AGATAGCAGCTCGTCCAGAA+AGG | 0.593820 | 8.4:+19596237 | MS.gene43223:CDS |
| GATACAAGTGACTCATAAGC+AGG | 0.595058 | 8.4:-19600413 | None:intergenic |
| TGTAAAACATCCTCAAGTTG+TGG | 0.595777 | 8.4:+19604382 | MS.gene43223:CDS |
| TTCAACGAACTCTCGATGCG+TGG | 0.600610 | 8.4:+19594294 | MS.gene43223:CDS |
| GCTCTCTTAGCATCATCCAA+AGG | 0.607950 | 8.4:-19604040 | None:intergenic |
| AGAGCTTACTTCTCAAATGG+AGG | 0.608823 | 8.4:+19596277 | MS.gene43223:CDS |
| TTAGGATATCTAAAACTGAA+GGG | 0.610429 | 8.4:-19602935 | None:intergenic |
| CTTTCAGATGTGGCATCTGG+AGG | 0.611122 | 8.4:+19608281 | MS.gene43223:CDS |
| TCTGTATATGAAACTTCTTG+AGG | 0.616717 | 8.4:+19601737 | MS.gene43223:CDS |
| ACACCTGAATACTTGTGAGA+AGG | 0.616732 | 8.4:-19607050 | None:intergenic |
| TGATCTGGCAAACACCACAA+CGG | 0.616742 | 8.4:+19607905 | MS.gene43223:CDS |
| ATTTGGTGTGTGTATCATAG+AGG | 0.620229 | 8.4:+19608411 | MS.gene43223:CDS |
| TCCTCCAAAAGTCAGAACTC+AGG | 0.621151 | 8.4:+19595147 | MS.gene43223:CDS |
| ATTACCTCAAGGCTTCAACC+AGG | 0.621335 | 8.4:-19603909 | None:intergenic |
| AATCTTCAGGATACTGAACC+CGG | 0.622658 | 8.4:-19600756 | None:intergenic |
| GTACCCCAGTTACTCCAGAC+AGG | 0.624785 | 8.4:+19602682 | MS.gene43223:CDS |
| CTTGTAGATTAGCATTGCAG+TGG | 0.625006 | 8.4:+19595286 | MS.gene43223:intron |
| GATAGTATAATTATTCCTAG+AGG | 0.627753 | 8.4:+19607951 | MS.gene43223:CDS |
| TGGAGTAACTGGGGTACAGG+AGG | 0.631820 | 8.4:-19602676 | None:intergenic |
| GAACTTCTGGAAGGTTCATG+GGG | 0.631980 | 8.4:+19605372 | MS.gene43223:CDS |
| TTGGGATCACAGTACAGCAT+AGG | 0.632307 | 8.4:+19607277 | MS.gene43223:CDS |
| TAACTGTCCGATTGTAGATG+TGG | 0.641888 | 8.4:-19603843 | None:intergenic |
| TTAGGATGAGGAAGACGTGA+AGG | 0.645745 | 8.4:+19599909 | MS.gene43223:intron |
| TGCAGTGTAGTGTATCAACT+CGG | 0.648103 | 8.4:-19598616 | None:intergenic |
| CTACAATCGGACAGTTAGCG+GGG | 0.649155 | 8.4:+19603849 | MS.gene43223:CDS |
| GCGATCGGCTTGCATGCGAA+CGG | 0.654628 | 8.4:-19594258 | None:intergenic |
| CACACCAAATTCAACTCGAG+TGG | 0.659599 | 8.4:-19608398 | None:intergenic |
| GGGAGTATAGACAGTCCACA+TGG | 0.662541 | 8.4:-19602915 | None:intergenic |
| TTGTGGCAGATGCTATCCAA+CGG | 0.663478 | 8.4:+19604399 | MS.gene43223:CDS |
| GCATGCGAACGGTATCATCA+GGG | 0.670467 | 8.4:-19594247 | None:intergenic |
| ACATTTAATGAGTCACGCAG+TGG | 0.679600 | 8.4:-19594926 | None:intergenic |
| GATAAAGAAAGCATGGCTGG+TGG | 0.682032 | 8.4:-19605445 | None:intergenic |
| ATAGAGCAATCAACTAACGA+AGG | 0.684184 | 8.4:-19607252 | None:intergenic |
| TGCTTGGGACATGAGAACAA+TGG | 0.695535 | 8.4:+19604580 | MS.gene43223:CDS |
| TGGCTTGATACAGCACCATG+TGG | 0.697379 | 8.4:+19602900 | MS.gene43223:CDS |
| CGTGCCTGCGCAAGACTGGG+GGG | 0.701717 | 8.4:+19595325 | MS.gene43223:CDS |
| ACAGCTGAGTGATTCTACGA+AGG | 0.703842 | 8.4:+19598716 | MS.gene43223:CDS |
| TTACCTGTCTGGAGTAACTG+GGG | 0.713721 | 8.4:-19602685 | None:intergenic |
| TGGAATAGTGAAATGGCTCA+GGG | 0.714001 | 8.4:+19595352 | MS.gene43223:CDS |
| ATCTGGCAAACACCACAACG+GGG | 0.717394 | 8.4:+19607907 | MS.gene43223:CDS |
| TCTGGCAAACACCACAACGG+GGG | 0.728992 | 8.4:+19607908 | MS.gene43223:CDS |
| GGCGAGGGGATAAACAACTG+AGG | 0.741182 | 8.4:-19607222 | None:intergenic |
| GGACATGGGTGATTCATACG+TGG | 0.757265 | 8.4:+19599951 | MS.gene43223:CDS |
| TTATTGAAGATGTTTCACAG+GGG | 0.817174 | 8.4:+19595124 | MS.gene43223:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 19594197 | 19608430 | 19594197 | ID=MS.gene43223 |
| chr8.4 | mRNA | 19594197 | 19608430 | 19594197 | ID=MS.gene43223.t1;Parent=MS.gene43223 |
| chr8.4 | exon | 19594197 | 19594319 | 19594197 | ID=MS.gene43223.t1.exon1;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19594197 | 19594319 | 19594197 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19594684 | 19594761 | 19594684 | ID=MS.gene43223.t1.exon2;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19594684 | 19594761 | 19594684 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19594884 | 19594946 | 19594884 | ID=MS.gene43223.t1.exon3;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19594884 | 19594946 | 19594884 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19595121 | 19595168 | 19595121 | ID=MS.gene43223.t1.exon4;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19595121 | 19595168 | 19595121 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19595293 | 19595439 | 19595293 | ID=MS.gene43223.t1.exon5;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19595293 | 19595439 | 19595293 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19596221 | 19596352 | 19596221 | ID=MS.gene43223.t1.exon6;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19596221 | 19596352 | 19596221 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19596469 | 19596509 | 19596469 | ID=MS.gene43223.t1.exon7;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19596469 | 19596509 | 19596469 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19597172 | 19597263 | 19597172 | ID=MS.gene43223.t1.exon8;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19597172 | 19597263 | 19597172 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19598610 | 19598737 | 19598610 | ID=MS.gene43223.t1.exon9;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19598610 | 19598737 | 19598610 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19599913 | 19599988 | 19599913 | ID=MS.gene43223.t1.exon10;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19599913 | 19599988 | 19599913 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19600134 | 19600254 | 19600134 | ID=MS.gene43223.t1.exon11;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19600134 | 19600254 | 19600134 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19600340 | 19600439 | 19600340 | ID=MS.gene43223.t1.exon12;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19600340 | 19600439 | 19600340 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19600748 | 19600829 | 19600748 | ID=MS.gene43223.t1.exon13;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19600748 | 19600829 | 19600748 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19601676 | 19601758 | 19601676 | ID=MS.gene43223.t1.exon14;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19601676 | 19601758 | 19601676 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19602028 | 19602147 | 19602028 | ID=MS.gene43223.t1.exon15;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19602028 | 19602147 | 19602028 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19602652 | 19602703 | 19602652 | ID=MS.gene43223.t1.exon16;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19602652 | 19602703 | 19602652 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19602871 | 19603026 | 19602871 | ID=MS.gene43223.t1.exon17;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19602871 | 19603026 | 19602871 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19603803 | 19603926 | 19603803 | ID=MS.gene43223.t1.exon18;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19603803 | 19603926 | 19603803 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19604021 | 19604102 | 19604021 | ID=MS.gene43223.t1.exon19;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19604021 | 19604102 | 19604021 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19604184 | 19604272 | 19604184 | ID=MS.gene43223.t1.exon20;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19604184 | 19604272 | 19604184 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19604379 | 19604453 | 19604379 | ID=MS.gene43223.t1.exon21;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19604379 | 19604453 | 19604379 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19604577 | 19604631 | 19604577 | ID=MS.gene43223.t1.exon22;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19604577 | 19604631 | 19604577 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19605368 | 19605487 | 19605368 | ID=MS.gene43223.t1.exon23;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19605368 | 19605487 | 19605368 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19606976 | 19607068 | 19606976 | ID=MS.gene43223.t1.exon24;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19606976 | 19607068 | 19606976 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19607153 | 19607298 | 19607153 | ID=MS.gene43223.t1.exon25;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19607153 | 19607298 | 19607153 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19607863 | 19608040 | 19607863 | ID=MS.gene43223.t1.exon26;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19607863 | 19608040 | 19607863 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| chr8.4 | exon | 19608152 | 19608430 | 19608152 | ID=MS.gene43223.t1.exon27;Parent=MS.gene43223.t1 |
| chr8.4 | CDS | 19608152 | 19608430 | 19608152 | ID=cds.MS.gene43223.t1;Parent=MS.gene43223.t1 |
| Gene Sequence |
| Protein sequence |
