Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43291.t1 | XP_003608950.1 | 99.6 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 6.80E-277 | 962.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43291.t1 | Q9FL12 | 83.7 | 479 | 77 | 1 | 3 | 481 | 111 | 588 | 6.3e-239 | 827.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43291.t1 | G7JNU4 | 99.6 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 4.9e-277 | 962.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene43291 | MS.gene03012 | PPI |
MS.gene43291 | MS.gene20686 | PPI |
MS.gene005649 | MS.gene43291 | PPI |
MS.gene07164 | MS.gene43291 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43291.t1 | MTR_4g106730 | 99.584 | 481 | 2 | 0 | 1 | 481 | 110 | 590 | 0.0 | 989 |
MS.gene43291.t1 | MTR_1g088980 | 51.948 | 462 | 217 | 2 | 18 | 479 | 102 | 558 | 2.87e-176 | 508 |
MS.gene43291.t1 | MTR_6g004110 | 50.746 | 469 | 227 | 3 | 11 | 479 | 73 | 537 | 2.86e-163 | 473 |
MS.gene43291.t1 | MTR_6g004110 | 51.157 | 432 | 207 | 3 | 48 | 479 | 3 | 430 | 1.83e-151 | 439 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43291.t1 | AT5G40200 | 83.716 | 479 | 77 | 1 | 3 | 481 | 111 | 588 | 0.0 | 832 |
MS.gene43291.t1 | AT2G47940 | 51.732 | 462 | 218 | 2 | 18 | 479 | 115 | 571 | 4.94e-174 | 503 |
MS.gene43291.t1 | AT2G47940 | 51.732 | 462 | 218 | 2 | 18 | 479 | 114 | 570 | 5.05e-174 | 503 |
MS.gene43291.t1 | AT5G36950 | 50.000 | 464 | 227 | 4 | 17 | 479 | 111 | 570 | 9.24e-156 | 455 |
MS.gene43291.t1 | AT1G65630 | 45.148 | 474 | 245 | 4 | 8 | 480 | 83 | 542 | 2.37e-135 | 402 |
MS.gene43291.t1 | AT1G65640 | 44.612 | 464 | 238 | 4 | 17 | 480 | 71 | 515 | 1.41e-128 | 383 |
MS.gene43291.t1 | AT5G40560 | 43.290 | 462 | 234 | 6 | 18 | 479 | 39 | 472 | 2.16e-115 | 348 |
MS.gene43291.t1 | AT1G65640 | 45.000 | 380 | 195 | 3 | 17 | 396 | 71 | 436 | 3.45e-108 | 328 |
MS.gene43291.t1 | AT3G16540 | 39.785 | 465 | 237 | 5 | 18 | 479 | 106 | 530 | 3.38e-106 | 327 |
MS.gene43291.t1 | AT3G16550 | 37.526 | 485 | 266 | 6 | 1 | 478 | 45 | 499 | 6.67e-98 | 304 |
MS.gene43291.t1 | AT1G51150 | 43.949 | 157 | 85 | 2 | 17 | 172 | 55 | 209 | 1.47e-37 | 137 |
MS.gene43291.t1 | AT5G54745 | 40.341 | 176 | 77 | 5 | 17 | 189 | 42 | 192 | 1.29e-30 | 118 |
MS.gene43291.t1 | AT3G27925 | 26.087 | 299 | 183 | 12 | 46 | 327 | 156 | 433 | 9.12e-12 | 67.4 |
MS.gene43291.t1 | AT3G27925 | 26.087 | 299 | 183 | 12 | 46 | 327 | 156 | 433 | 9.12e-12 | 67.4 |
Find 127 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGATGTCGCCTGTGGATTT+TGG | 0.169302 | 8.4:+20530618 | MS.gene43291:CDS |
CACAGAGCTTCTAGGTTTAC+AGG | 0.192508 | 8.4:+20530761 | MS.gene43291:CDS |
TGAAGCTCCAGTCAAGATTT+TGG | 0.209977 | 8.4:+20532566 | MS.gene43291:CDS |
TCTGGTGGACCTGCATTTAA+TGG | 0.215894 | 8.4:+20530899 | MS.gene43291:CDS |
TGGTTCTGATACTAAGTATT+TGG | 0.241599 | 8.4:+20528251 | MS.gene43291:CDS |
CTATGGACGCGGACCCTATA+TGG | 0.266128 | 8.4:+20528025 | None:intergenic |
CATGGTTCCACAGAGCTTCT+AGG | 0.291078 | 8.4:+20530753 | MS.gene43291:CDS |
CCCTCGTATTATATCATTGC+AGG | 0.296000 | 8.4:+20532211 | MS.gene43291:CDS |
GATGTTATCCTTAGCTTTGA+TGG | 0.305411 | 8.4:+20531320 | MS.gene43291:CDS |
GCTATAAATTCTGGAAATTC+TGG | 0.311869 | 8.4:+20530881 | MS.gene43291:CDS |
AAATTCAATATTAAACTTGA+TGG | 0.313467 | 8.4:+20532148 | MS.gene43291:CDS |
ATAGATGCTGCTATAAATTC+TGG | 0.318166 | 8.4:+20530872 | MS.gene43291:CDS |
GGCTTGCCCTTGCTGTGTGC+TGG | 0.318695 | 8.4:-20532187 | None:intergenic |
CGGGGTTGAGTGGCAGAAAA+TGG | 0.329262 | 8.4:+20531190 | MS.gene43291:CDS |
GTTATAGGATTCCCTATTCT+CGG | 0.354820 | 8.4:+20531170 | MS.gene43291:intron |
GGTTTCAAAACCTGAGATTC+AGG | 0.356639 | 8.4:-20531293 | None:intergenic |
GCCACTCAACCCCGAGAATA+GGG | 0.366272 | 8.4:-20531181 | None:intergenic |
ATATTCACCTGTTCCATCAT+TGG | 0.367062 | 8.4:-20531354 | None:intergenic |
CTCCACATCTTCATGTTTGA+GGG | 0.374614 | 8.4:-20530954 | None:intergenic |
CAGTATAGCTCTAGTAGTAC+TGG | 0.378262 | 8.4:+20528150 | MS.gene43291:CDS |
CATGAAGATGTGGAGAATAT+AGG | 0.388044 | 8.4:+20530962 | MS.gene43291:CDS |
TTGGCCACTGTTCTTGCCAT+TGG | 0.392367 | 8.4:+20528270 | MS.gene43291:CDS |
CTCATATCACAGAAATATAC+TGG | 0.394005 | 8.4:+20532082 | MS.gene43291:CDS |
TTAAACTTGATGGTCATAGA+AGG | 0.395091 | 8.4:+20532158 | MS.gene43291:CDS |
GTCGACAATCTCTCCCATAT+AGG | 0.401342 | 8.4:-20528039 | None:intergenic |
GAGAAGAATGGAGGATATAC+TGG | 0.405802 | 8.4:+20531031 | MS.gene43291:CDS |
CCCATTGCCATTCGTAGATC+AGG | 0.406231 | 8.4:-20531218 | None:intergenic |
ATTACAACAAGTTGTTCATC+TGG | 0.408369 | 8.4:-20532618 | None:intergenic |
ATGTTATCCTTAGCTTTGAT+GGG | 0.414306 | 8.4:+20531321 | MS.gene43291:CDS |
TTATAGGATTCCCTATTCTC+GGG | 0.416843 | 8.4:+20531171 | MS.gene43291:intron |
GAGATAGTGTCTCCACCAAT+TGG | 0.418659 | 8.4:-20530684 | None:intergenic |
TCGACAATCTCTCCCATATA+GGG | 0.419400 | 8.4:-20528038 | None:intergenic |
CTGTTGACGATGATGAGTTC+TGG | 0.425115 | 8.4:+20530592 | MS.gene43291:CDS |
GGTGTTGCCTTCGATGGATT+CGG | 0.426109 | 8.4:+20528065 | MS.gene43291:CDS |
TCCTACTTCTCCTGAATCTC+AGG | 0.432674 | 8.4:+20531283 | MS.gene43291:CDS |
TCTCCACATCTTCATGTTTG+AGG | 0.438460 | 8.4:-20530955 | None:intergenic |
CTCCATTCTTCTCATAATCC+TGG | 0.444733 | 8.4:-20531021 | None:intergenic |
ATGCGCTCTCCATGGCGAAA+TGG | 0.455675 | 8.4:-20532046 | None:intergenic |
TGCCACTCAACCCCGAGAAT+AGG | 0.456310 | 8.4:-20531182 | None:intergenic |
TCTGTATTTCTGAAGGTCGT+TGG | 0.456981 | 8.4:+20532875 | MS.gene43291:intron |
ACAACTTGTTGTAATTTCTC+AGG | 0.458392 | 8.4:+20532626 | MS.gene43291:CDS |
CAAGATGCAGTAACTGTTGT+GGG | 0.465336 | 8.4:+20530657 | MS.gene43291:CDS |
TGGATGAAATGCATGATAAC+TGG | 0.468154 | 8.4:-20531001 | None:intergenic |
CAACAGTTACTGCATCTTGA+AGG | 0.470221 | 8.4:-20530653 | None:intergenic |
ATCCAGGATTATGAGAAGAA+TGG | 0.472684 | 8.4:+20531019 | MS.gene43291:CDS |
TACTGTCTCTTCCTCTGCCA+TGG | 0.473393 | 8.4:-20528132 | None:intergenic |
AGTACTGGGTTTGTGATAAG+TGG | 0.476461 | 8.4:+20528165 | MS.gene43291:CDS |
GACGAGGGTGTTGCCTTCGA+TGG | 0.490265 | 8.4:+20528059 | MS.gene43291:CDS |
TCCTGATCTACGAATGGCAA+TGG | 0.502261 | 8.4:+20531217 | MS.gene43291:CDS |
CATATAGGGTCCGCGTCCAT+AGG | 0.504736 | 8.4:-20528024 | None:intergenic |
AGATAGTGTCTCCACCAATT+GGG | 0.508039 | 8.4:-20530683 | None:intergenic |
CAAACCTCAGAACGAAGATA+AGG | 0.514741 | 8.4:-20532259 | None:intergenic |
AATGGTAAAGGAACCTGTGT+GGG | 0.518960 | 8.4:+20530917 | MS.gene43291:CDS |
AGTTATCATGCATTTCATCC+AGG | 0.524902 | 8.4:+20531003 | MS.gene43291:CDS |
TCTTAAGAGCTTGGCCGCAA+TGG | 0.525473 | 8.4:+20532922 | MS.gene43291:CDS |
GATATTGCCAATGATGGAAC+AGG | 0.525675 | 8.4:+20531347 | MS.gene43291:CDS |
GGACCTGCATTTAATGGTAA+AGG | 0.527175 | 8.4:+20530905 | MS.gene43291:CDS |
TGCCATGGAAGCGAAAAGTT+CGG | 0.527432 | 8.4:-20528117 | None:intergenic |
ACTGTTGTGGGCTACCCAAT+TGG | 0.529356 | 8.4:+20530669 | MS.gene43291:CDS |
GGGGTTGATATTGCCAATGA+TGG | 0.531777 | 8.4:+20531341 | MS.gene43291:CDS |
GTACTGGGTTTGTGATAAGT+GGG | 0.534028 | 8.4:+20528166 | MS.gene43291:CDS |
TATGGACGCGGACCCTATAT+GGG | 0.534223 | 8.4:+20528026 | None:intergenic |
CCTGATCTACGAATGGCAAT+GGG | 0.535924 | 8.4:+20531218 | MS.gene43291:CDS |
GGTTTGTGATAAGTGGGAAG+AGG | 0.537880 | 8.4:+20528172 | MS.gene43291:CDS |
GTTCCTTTACCATTAAATGC+AGG | 0.539174 | 8.4:-20530908 | None:intergenic |
ATTTGATTTAGATTATGAGC+AGG | 0.539800 | 8.4:+20532973 | MS.gene43291:CDS |
ACCTGAGATTCAGGAGAAGT+AGG | 0.541494 | 8.4:-20531284 | None:intergenic |
TCCCTATTCTCGGGGTTGAG+TGG | 0.543312 | 8.4:+20531180 | MS.gene43291:CDS |
GGTTCCTTATCTTCGTTCTG+AGG | 0.546360 | 8.4:+20532255 | MS.gene43291:CDS |
TTTCGCCATGGAGAGCGCAT+TGG | 0.546950 | 8.4:+20532049 | MS.gene43291:CDS |
AGTTTATCCAAAATCTTGAC+TGG | 0.552356 | 8.4:-20532573 | None:intergenic |
TATCAACCCCATCAAAGCTA+AGG | 0.554345 | 8.4:-20531328 | None:intergenic |
ATAAATTCTGGAAATTCTGG+TGG | 0.555899 | 8.4:+20530884 | MS.gene43291:CDS |
TCAAGATGCAGTAACTGTTG+TGG | 0.557203 | 8.4:+20530656 | MS.gene43291:CDS |
TGTTATCCTTAGCTTTGATG+GGG | 0.558128 | 8.4:+20531322 | MS.gene43291:CDS |
AGATCGTCAGACATTGCTGA+TGG | 0.570063 | 8.4:-20533142 | None:intergenic |
AACAGTTACTGCATCTTGAA+GGG | 0.570653 | 8.4:-20530652 | None:intergenic |
TCTCACCAATGCACATTCTG+TGG | 0.578743 | 8.4:+20528197 | MS.gene43291:CDS |
TTCTGTGGAGCATTATACTC+AGG | 0.579455 | 8.4:+20528212 | MS.gene43291:CDS |
GTTACTGCATCTTGAAGGGT+AGG | 0.582527 | 8.4:-20530648 | None:intergenic |
GGGTGCTACACCTATGGACG+CGG | 0.582848 | 8.4:+20528014 | None:intergenic |
GCTTATTCCAGCACACAGCA+AGG | 0.586438 | 8.4:+20532180 | MS.gene43291:CDS |
GTTTGTGATAAGTGGGAAGA+GGG | 0.587829 | 8.4:+20528173 | MS.gene43291:CDS |
GTCCCTCAAACATGAAGATG+TGG | 0.589333 | 8.4:+20530952 | MS.gene43291:CDS |
GGCAACTCCCCAAAATCCAC+AGG | 0.590552 | 8.4:-20530627 | None:intergenic |
AAATGCATGATAACTGGCGT+TGG | 0.591084 | 8.4:-20530995 | None:intergenic |
TGAAACCAATGCGCTCTCCA+TGG | 0.591141 | 8.4:-20532054 | None:intergenic |
ATCATCGTCAACAGTAAGCA+TGG | 0.594829 | 8.4:-20530583 | None:intergenic |
GGAAAATCCTGATCTACGAA+TGG | 0.598308 | 8.4:+20531211 | MS.gene43291:CDS |
CTAGAAGCTCTGTGGAACCA+TGG | 0.601251 | 8.4:-20530752 | None:intergenic |
AGTTGTTCATCTGGTGATTG+TGG | 0.604082 | 8.4:-20532609 | None:intergenic |
TTTCCAGTTCCATTTCGCCA+TGG | 0.606699 | 8.4:+20532037 | MS.gene43291:intron |
AGTATAGCTCTAGTAGTACT+GGG | 0.614678 | 8.4:+20528151 | MS.gene43291:CDS |
AATGTCACACTCAGTTCCAA+TGG | 0.620022 | 8.4:-20528286 | None:intergenic |
AATACGTGATACAACGCCAC+TGG | 0.620175 | 8.4:-20530712 | None:intergenic |
ATTGGAACTGAGTGTGACAT+TGG | 0.624727 | 8.4:+20528288 | MS.gene43291:CDS |
CTTATTCCAGCACACAGCAA+GGG | 0.624783 | 8.4:+20532181 | MS.gene43291:CDS |
GTTGTGGGCTACCCAATTGG+TGG | 0.626711 | 8.4:+20530672 | MS.gene43291:CDS |
CTGGCAAGGGATGTCGCCTG+TGG | 0.627026 | 8.4:+20530611 | MS.gene43291:CDS |
TATAGGATTCCCTATTCTCG+GGG | 0.629454 | 8.4:+20531172 | MS.gene43291:intron |
GACGATGATGAGTTCTGGCA+AGG | 0.630166 | 8.4:+20530597 | MS.gene43291:CDS |
TTGACACATATAGGTGCTGG+TGG | 0.631847 | 8.4:+20532719 | MS.gene43291:intron |
CAGGATTATGAGAAGAATGG+AGG | 0.632907 | 8.4:+20531022 | MS.gene43291:CDS |
AAGCTAAGGATAACATCTGA+CGG | 0.633148 | 8.4:-20531314 | None:intergenic |
CATGTATAAACAGTACGGGA+AGG | 0.634604 | 8.4:+20532533 | MS.gene43291:intron |
TTCACCACCGAATCCATCGA+AGG | 0.639367 | 8.4:-20528072 | None:intergenic |
GTTGCCTTCGATGGATTCGG+TGG | 0.650095 | 8.4:+20528068 | MS.gene43291:CDS |
CAGGTTAAGCTCAAGAAACG+TGG | 0.650336 | 8.4:+20528231 | MS.gene43291:CDS |
ATCACAGCTCTCTACCATTG+CGG | 0.652168 | 8.4:-20532936 | None:intergenic |
GACACTATCTCTGTGACCAG+TGG | 0.655702 | 8.4:+20530696 | MS.gene43291:CDS |
TCCTGCAATGATATAATACG+AGG | 0.655847 | 8.4:-20532212 | None:intergenic |
ATGCAGCAATCAAAGTATTG+CGG | 0.658146 | 8.4:+20532110 | MS.gene43291:CDS |
TGAAGAGATCGTTAACACCC+AGG | 0.659316 | 8.4:+20532761 | MS.gene43291:CDS |
AGTTCCAATGGCAAGAACAG+TGG | 0.661200 | 8.4:-20528274 | None:intergenic |
CTGGTGGCTGATATTAACAT+CGG | 0.661404 | 8.4:+20532735 | MS.gene43291:CDS |
ATGCTCCACAGAATGTGCAT+TGG | 0.665532 | 8.4:-20528202 | None:intergenic |
ATGGTAAAGGAACCTGTGTG+GGG | 0.668814 | 8.4:+20530918 | MS.gene43291:CDS |
ACGATGATGAGTTCTGGCAA+GGG | 0.672265 | 8.4:+20530598 | MS.gene43291:CDS |
ATGGGAGAGATTGTCGACGA+GGG | 0.674525 | 8.4:+20528044 | MS.gene43291:CDS |
GGCATGAAATCTGATCAGAA+AGG | 0.679713 | 8.4:+20531239 | MS.gene43291:CDS |
CTGTAAACCTAGAAGCTCTG+TGG | 0.679911 | 8.4:-20530760 | None:intergenic |
CCTGCAATGATATAATACGA+GGG | 0.686734 | 8.4:-20532211 | None:intergenic |
CTGAAATGCTATCCCCACAC+AGG | 0.690364 | 8.4:-20530930 | None:intergenic |
TGTTGCAAGAATATCTAGCG+TGG | 0.690556 | 8.4:-20533110 | None:intergenic |
TAATGGTAAAGGAACCTGTG+TGG | 0.691655 | 8.4:+20530916 | MS.gene43291:CDS |
TATGGGAGAGATTGTCGACG+AGG | 0.698274 | 8.4:+20528043 | MS.gene43291:CDS |
GCAATGATATAATACGAGGG+AGG | 0.718323 | 8.4:-20532208 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAAATTTATTTTAATT+AGG | - | chr8.4:20529990-20530009 | None:intergenic | 0.0% |
!! | ATAGCATAAATTATTTATAT+TGG | + | chr8.4:20530408-20530427 | MS.gene43291:intron | 10.0% |
!!! | TAGAATTTTACTTTTAAATT+GGG | + | chr8.4:20531080-20531099 | MS.gene43291:intron | 10.0% |
!!! | TTTATATTTTACTTTACTAT+TGG | + | chr8.4:20532436-20532455 | MS.gene43291:intron | 10.0% |
!! | AAATTCAATATTAAACTTGA+TGG | + | chr8.4:20532148-20532167 | MS.gene43291:CDS | 15.0% |
!! | AGAAAAATTTATTTGAATCT+AGG | - | chr8.4:20529727-20529746 | None:intergenic | 15.0% |
!! | TTGATATACATAAAAAGAAA+AGG | - | chr8.4:20528366-20528385 | None:intergenic | 15.0% |
!!! | AATTTAAAGTTTCTTCATAT+TGG | - | chr8.4:20529929-20529948 | None:intergenic | 15.0% |
!!! | GTAGAATTTTACTTTTAAAT+TGG | + | chr8.4:20531079-20531098 | MS.gene43291:intron | 15.0% |
!! | AAAATTGAGTTAGAAAAGAA+TGG | - | chr8.4:20532512-20532531 | None:intergenic | 20.0% |
!! | AAAATTTATTTGAATCTAGG+AGG | - | chr8.4:20529724-20529743 | None:intergenic | 20.0% |
!! | AAATTAACATGATACGTTAT+AGG | - | chr8.4:20530087-20530106 | None:intergenic | 20.0% |
!! | AAATTGAGTTAGAAAAGAAT+GGG | - | chr8.4:20532511-20532530 | None:intergenic | 20.0% |
!! | AAATTTATTTGAATCTAGGA+GGG | - | chr8.4:20529723-20529742 | None:intergenic | 20.0% |
!! | AACAATATGTCTTATGAATT+TGG | + | chr8.4:20531563-20531582 | MS.gene43291:intron | 20.0% |
!! | AACAGAAAAATGAGAAAATT+TGG | - | chr8.4:20531153-20531172 | None:intergenic | 20.0% |
!! | AATCAAAACTATAATCGATA+AGG | + | chr8.4:20529882-20529901 | MS.gene43291:intron | 20.0% |
!! | ACAAACTATTTGAATAGAAT+CGG | + | chr8.4:20531676-20531695 | MS.gene43291:intron | 20.0% |
!! | ATCAAAACTATAATCGATAA+GGG | + | chr8.4:20529883-20529902 | MS.gene43291:intron | 20.0% |
!! | ATCTCATACATAAAATCATT+CGG | - | chr8.4:20529245-20529264 | None:intergenic | 20.0% |
!! | ATTATTTATAGCCTCAAAAA+AGG | - | chr8.4:20529791-20529810 | None:intergenic | 20.0% |
!! | CTTGTTCATATCTAAATAAA+CGG | - | chr8.4:20531799-20531818 | None:intergenic | 20.0% |
!! | TTTATGTATATCAATCAAGT+TGG | + | chr8.4:20528372-20528391 | MS.gene43291:intron | 20.0% |
!! | TTTATTTAGATATGAACAAG+AGG | + | chr8.4:20531799-20531818 | MS.gene43291:intron | 20.0% |
!!! | ATGTTAATTTTGTGATATAG+CGG | + | chr8.4:20530097-20530116 | MS.gene43291:intron | 20.0% |
!!! | ATTTGAAAGGATCATTTTAT+TGG | + | chr8.4:20528583-20528602 | MS.gene43291:intron | 20.0% |
!!! | TAAATCTTGAATTACTGATT+AGG | - | chr8.4:20530024-20530043 | None:intergenic | 20.0% |
!!! | TCATTTTATTGGAAATTGTA+AGG | + | chr8.4:20528594-20528613 | MS.gene43291:intron | 20.0% |
!!! | TTATTTTAATTAGGATTTGC+TGG | - | chr8.4:20529981-20530000 | None:intergenic | 20.0% |
!!! | TTTTCTCATTTTTCTGTTAT+AGG | + | chr8.4:20531155-20531174 | MS.gene43291:intron | 20.0% |
!!! | TTTTTCATGTATAAACAGTA+CGG | + | chr8.4:20532528-20532547 | MS.gene43291:intron | 20.0% |
! | AGTGTTCAAAAACATAGTAA+TGG | - | chr8.4:20530379-20530398 | None:intergenic | 25.0% |
! | AGTTTAACAGTCTGTTAATA+AGG | + | chr8.4:20531992-20532011 | MS.gene43291:intron | 25.0% |
! | ATAGAATCATACAACATCAA+CGG | + | chr8.4:20529527-20529546 | MS.gene43291:intron | 25.0% |
! | ATATAAAGCTGCATATAACA+AGG | - | chr8.4:20532423-20532442 | None:intergenic | 25.0% |
! | ATATAAAGCTGCATATTACA+AGG | - | chr8.4:20532397-20532416 | None:intergenic | 25.0% |
! | CAAATAGCAAATGTTAAAGA+TGG | - | chr8.4:20531735-20531754 | None:intergenic | 25.0% |
! | CCAACACAAAATTAAAATGT+AGG | + | chr8.4:20528658-20528677 | MS.gene43291:intron | 25.0% |
! | TACATGATATCAACTATGAT+AGG | + | chr8.4:20531472-20531491 | MS.gene43291:intron | 25.0% |
! | TCATCTTTGACAATCATTAA+TGG | + | chr8.4:20530251-20530270 | MS.gene43291:intron | 25.0% |
! | TCTATATAATAACCATATGC+AGG | - | chr8.4:20529365-20529384 | None:intergenic | 25.0% |
! | TGTAAAAAATCTTAAGAGCT+TGG | + | chr8.4:20532913-20532932 | MS.gene43291:CDS | 25.0% |
! | TTATATTATGAATATCCACG+TGG | + | chr8.4:20529619-20529638 | MS.gene43291:intron | 25.0% |
!! | ATGTCTATTATAGCTTTTCT+AGG | - | chr8.4:20528876-20528895 | None:intergenic | 25.0% |
!! | ATTTGATTTAGATTATGAGC+AGG | + | chr8.4:20532973-20532992 | MS.gene43291:CDS | 25.0% |
!! | GTTTTGTATTTGTGATTCAT+GGG | + | chr8.4:20528425-20528444 | MS.gene43291:intron | 25.0% |
!! | TCATGAGTTGGATAATAATA+TGG | + | chr8.4:20528943-20528962 | MS.gene43291:intron | 25.0% |
!! | TTCATTACTGACTAATAAAC+TGG | + | chr8.4:20529424-20529443 | MS.gene43291:intron | 25.0% |
!! | TTTTCATGTATAAACAGTAC+GGG | + | chr8.4:20532529-20532548 | MS.gene43291:intron | 25.0% |
!!! | AAGCTCTTAAGATTTTTTAC+AGG | - | chr8.4:20532914-20532933 | None:intergenic | 25.0% |
!!! | AGTTTTGTATTTGTGATTCA+TGG | + | chr8.4:20528424-20528443 | MS.gene43291:intron | 25.0% |
!!! | ATTAGTTTTTCGTAGAATTC+TGG | + | chr8.4:20532289-20532308 | MS.gene43291:intron | 25.0% |
!!! | ATTTGTTTTTTCAACGGTTT+CGG | + | chr8.4:20532234-20532253 | MS.gene43291:CDS | 25.0% |
!!! | CATATTTTTGTTTTCCATGT+TGG | + | chr8.4:20532802-20532821 | MS.gene43291:intron | 25.0% |
!!! | CATCTTTAACATTTGCTATT+TGG | + | chr8.4:20531733-20531752 | MS.gene43291:intron | 25.0% |
!!! | CCTACATTTTAATTTTGTGT+TGG | - | chr8.4:20528661-20528680 | None:intergenic | 25.0% |
AAAATTCATGAAGGAAAACC+AGG | - | chr8.4:20530841-20530860 | None:intergenic | 30.0% | |
AACAAACCTAAACCATAACA+TGG | - | chr8.4:20531766-20531785 | None:intergenic | 30.0% | |
AATAGAGGAGAAACATTGTA+AGG | + | chr8.4:20529321-20529340 | MS.gene43291:intron | 30.0% | |
AATGATCCTTTCAAATTGAG+TGG | - | chr8.4:20528579-20528598 | None:intergenic | 30.0% | |
AGAGATACTCAGATACAATA+AGG | - | chr8.4:20532699-20532718 | None:intergenic | 30.0% | |
AGTATCTCTTTGACACATAT+AGG | + | chr8.4:20532710-20532729 | MS.gene43291:intron | 30.0% | |
AGTTTATCCAAAATCTTGAC+TGG | - | chr8.4:20532576-20532595 | None:intergenic | 30.0% | |
ATAGATGCTGCTATAAATTC+TGG | + | chr8.4:20530872-20530891 | MS.gene43291:CDS | 30.0% | |
ATCCTTCTCATTATATGCTT+TGG | + | chr8.4:20529571-20529590 | MS.gene43291:intron | 30.0% | |
ATGTTAAAGATGGACAGATA+TGG | - | chr8.4:20531725-20531744 | None:intergenic | 30.0% | |
ATTACAACAAGTTGTTCATC+TGG | - | chr8.4:20532621-20532640 | None:intergenic | 30.0% | |
CAAAAAAGGAAGACTAGTAT+CGG | - | chr8.4:20529777-20529796 | None:intergenic | 30.0% | |
CTCATATCACAGAAATATAC+TGG | + | chr8.4:20532082-20532101 | MS.gene43291:CDS | 30.0% | |
GACAGATTGAGAAATAAAGA+CGG | - | chr8.4:20533000-20533019 | None:intergenic | 30.0% | |
GCAAGAAACAAAATTCATGA+AGG | - | chr8.4:20530850-20530869 | None:intergenic | 30.0% | |
GCTGTTAGCTAATTATAAGA+AGG | + | chr8.4:20529593-20529612 | MS.gene43291:intron | 30.0% | |
GTTATCATTGTGTCTAAAAG+AGG | - | chr8.4:20531520-20531539 | None:intergenic | 30.0% | |
TAAAAAGCAGAGAACAACAT+AGG | - | chr8.4:20531914-20531933 | None:intergenic | 30.0% | |
TAAGTACCACTCAATTTGAA+AGG | + | chr8.4:20528570-20528589 | MS.gene43291:intron | 30.0% | |
TGTAAGGCAATAATAAGTGA+GGG | + | chr8.4:20529337-20529356 | MS.gene43291:intron | 30.0% | |
TTAGTACCATGTTATGGTTT+AGG | + | chr8.4:20531757-20531776 | MS.gene43291:intron | 30.0% | |
TTCTCTTATGAGAAAATGCA+TGG | + | chr8.4:20528466-20528485 | MS.gene43291:intron | 30.0% | |
TTGTAAGGCAATAATAAGTG+AGG | + | chr8.4:20529336-20529355 | MS.gene43291:intron | 30.0% | |
! | AAAATATGCTTGCTAGAAGT+TGG | + | chr8.4:20532333-20532352 | MS.gene43291:intron | 30.0% |
! | AAATATGCTTGCTAGAAGTT+GGG | + | chr8.4:20532334-20532353 | MS.gene43291:intron | 30.0% |
! | ATAAATTCTGGAAATTCTGG+TGG | + | chr8.4:20530884-20530903 | MS.gene43291:CDS | 30.0% |
! | ATTCAAATAGTTTGTCGATG+TGG | - | chr8.4:20531671-20531690 | None:intergenic | 30.0% |
! | CTATTGCTATAGCATTTTTG+TGG | + | chr8.4:20530461-20530480 | MS.gene43291:intron | 30.0% |
! | GAGATTTTATCTTATGTCCA+TGG | + | chr8.4:20530735-20530754 | MS.gene43291:CDS | 30.0% |
! | GCTATAAATTCTGGAAATTC+TGG | + | chr8.4:20530881-20530900 | MS.gene43291:CDS | 30.0% |
! | TAGTTGATATCATGTAGAAC+CGG | - | chr8.4:20531468-20531487 | None:intergenic | 30.0% |
! | TTAAACTTGATGGTCATAGA+AGG | + | chr8.4:20532158-20532177 | MS.gene43291:CDS | 30.0% |
! | TTAATAAGGCTTTGTACTCT+TGG | + | chr8.4:20532006-20532025 | MS.gene43291:intron | 30.0% |
! | TTACTGATTAGGACTATTTC+AGG | - | chr8.4:20530013-20530032 | None:intergenic | 30.0% |
!! | ACAACTTGTTGTAATTTCTC+AGG | + | chr8.4:20532626-20532645 | MS.gene43291:CDS | 30.0% |
!! | ATGTTATCCTTAGCTTTGAT+GGG | + | chr8.4:20531321-20531340 | MS.gene43291:CDS | 30.0% |
!! | GGTATATGATAAGAGCATTA+TGG | + | chr8.4:20528964-20528983 | MS.gene43291:intron | 30.0% |
!! | TAATTAGGATTTGCTGGTTA+GGG | - | chr8.4:20529975-20529994 | None:intergenic | 30.0% |
!! | TGGTTCTGATACTAAGTATT+TGG | + | chr8.4:20528251-20528270 | MS.gene43291:CDS | 30.0% |
!! | TTAATTAGGATTTGCTGGTT+AGG | - | chr8.4:20529976-20529995 | None:intergenic | 30.0% |
!! | TTTGGATTAGTACCATGTTA+TGG | + | chr8.4:20531751-20531770 | MS.gene43291:intron | 30.0% |
!!! | ATACTAGTCTTCCTTTTTTG+AGG | + | chr8.4:20529777-20529796 | MS.gene43291:intron | 30.0% |
!!! | TGCAGGATTTGTTTTTTCAA+CGG | + | chr8.4:20532228-20532247 | MS.gene43291:CDS | 30.0% |
AAACATTGCTCATATCAACC+TGG | - | chr8.4:20532782-20532801 | None:intergenic | 35.0% | |
AAATTCGCTAAGCTTTCTTG+TGG | + | chr8.4:20532484-20532503 | MS.gene43291:intron | 35.0% | |
AACAGTTACTGCATCTTGAA+GGG | - | chr8.4:20530655-20530674 | None:intergenic | 35.0% | |
AACATTGCTCATATCAACCT+GGG | - | chr8.4:20532781-20532800 | None:intergenic | 35.0% | |
AAGCTAAGGATAACATCTGA+CGG | - | chr8.4:20531317-20531336 | None:intergenic | 35.0% | |
ACCTGTAGATTCTTTAGCAA+TGG | + | chr8.4:20528803-20528822 | MS.gene43291:intron | 35.0% | |
AGATCTAGAGATTCATGAGT+TGG | + | chr8.4:20528931-20528950 | MS.gene43291:intron | 35.0% | |
AGCCAAAGCATATAATGAGA+AGG | - | chr8.4:20529576-20529595 | None:intergenic | 35.0% | |
AGTTATCATGCATTTCATCC+AGG | + | chr8.4:20531003-20531022 | MS.gene43291:CDS | 35.0% | |
ATATTCACCTGTTCCATCAT+TGG | - | chr8.4:20531357-20531376 | None:intergenic | 35.0% | |
ATCATTCCATGTATGAGTTG+TGG | + | chr8.4:20529118-20529137 | MS.gene43291:intron | 35.0% | |
ATCCAGGATTATGAGAAGAA+TGG | + | chr8.4:20531019-20531038 | MS.gene43291:CDS | 35.0% | |
ATTAAAATGTAGGAGAGACG+AGG | + | chr8.4:20528668-20528687 | MS.gene43291:intron | 35.0% | |
ATTTGTGATTCATGGGACAT+TGG | + | chr8.4:20528432-20528451 | MS.gene43291:intron | 35.0% | |
CATGAAGATGTGGAGAATAT+AGG | + | chr8.4:20530962-20530981 | MS.gene43291:CDS | 35.0% | |
CCTGCAATGATATAATACGA+GGG | - | chr8.4:20532214-20532233 | None:intergenic | 35.0% | |
CCTGTAGATTCTTTAGCAAT+GGG | + | chr8.4:20528804-20528823 | MS.gene43291:intron | 35.0% | |
CGTGATAAGGATACTTCAAT+CGG | + | chr8.4:20529834-20529853 | MS.gene43291:intron | 35.0% | |
CTAATCATCTATGCAGATAG+TGG | + | chr8.4:20533060-20533079 | MS.gene43291:intron | 35.0% | |
GCCAACGTGAAATATATCAA+TGG | + | chr8.4:20531965-20531984 | MS.gene43291:intron | 35.0% | |
GCCATTGATATATTTCACGT+TGG | - | chr8.4:20531969-20531988 | None:intergenic | 35.0% | |
GTCAGTAATGAATAGAACTG+AGG | - | chr8.4:20529416-20529435 | None:intergenic | 35.0% | |
GTTATAGGATTCCCTATTCT+CGG | + | chr8.4:20531170-20531189 | MS.gene43291:intron | 35.0% | |
GTTCCTTTACCATTAAATGC+AGG | - | chr8.4:20530911-20530930 | None:intergenic | 35.0% | |
GTTCTAACGTTGAAGAATAG+AGG | + | chr8.4:20529306-20529325 | MS.gene43291:intron | 35.0% | |
TAAGCTGCATAATGAGATCT+AGG | - | chr8.4:20531876-20531895 | None:intergenic | 35.0% | |
TACTCAGCAAAAACAGCAAA+AGG | - | chr8.4:20532676-20532695 | None:intergenic | 35.0% | |
TCATTCCATGTATGAGTTGT+GGG | + | chr8.4:20529119-20529138 | MS.gene43291:intron | 35.0% | |
TCCTGCAATGATATAATACG+AGG | - | chr8.4:20532215-20532234 | None:intergenic | 35.0% | |
TCTGTCACATACAACATCAT+CGG | - | chr8.4:20528620-20528639 | None:intergenic | 35.0% | |
TGATTGTCAAAGATGAACAG+AGG | - | chr8.4:20530247-20530266 | None:intergenic | 35.0% | |
TGGATGAAATGCATGATAAC+TGG | - | chr8.4:20531004-20531023 | None:intergenic | 35.0% | |
TTATAGGATTCCCTATTCTC+GGG | + | chr8.4:20531171-20531190 | MS.gene43291:intron | 35.0% | |
! | AAGCAAGCCTTTGTTCATTT+TGG | + | chr8.4:20530277-20530296 | MS.gene43291:intron | 35.0% |
! | ATGCATGGTAGTTTTTGCAA+AGG | + | chr8.4:20528481-20528500 | MS.gene43291:intron | 35.0% |
! | CGATTGAAGTATCCTTATCA+CGG | - | chr8.4:20529836-20529855 | None:intergenic | 35.0% |
! | GATTGAAGTATCCTTATCAC+GGG | - | chr8.4:20529835-20529854 | None:intergenic | 35.0% |
! | GGTGATGTGAATAATTTGTG+TGG | + | chr8.4:20529548-20529567 | MS.gene43291:intron | 35.0% |
! | TCTACTCTCTGTATTTCTGA+AGG | + | chr8.4:20532868-20532887 | MS.gene43291:intron | 35.0% |
! | TCTAGCAAGCATATTTTGTG+AGG | - | chr8.4:20532330-20532349 | None:intergenic | 35.0% |
! | TTATCACGGGAAGTTTGTTT+GGG | - | chr8.4:20529822-20529841 | None:intergenic | 35.0% |
!! | AGTATAGCTCTAGTAGTACT+GGG | + | chr8.4:20528151-20528170 | MS.gene43291:CDS | 35.0% |
!! | ATGCAGCAATCAAAGTATTG+CGG | + | chr8.4:20532110-20532129 | MS.gene43291:CDS | 35.0% |
!! | GATGTTATCCTTAGCTTTGA+TGG | + | chr8.4:20531320-20531339 | MS.gene43291:CDS | 35.0% |
!! | GTGGTTTGGTATCAGATATT+TGG | + | chr8.4:20530214-20530233 | MS.gene43291:intron | 35.0% |
!! | TGTTATCCTTAGCTTTGATG+GGG | + | chr8.4:20531322-20531341 | MS.gene43291:CDS | 35.0% |
AAATGCATGATAACTGGCGT+TGG | - | chr8.4:20530998-20531017 | None:intergenic | 40.0% | |
AAGCCATATTCCACTAAGTG+GGG | - | chr8.4:20529013-20529032 | None:intergenic | 40.0% | |
AATGGTAAAGGAACCTGTGT+GGG | + | chr8.4:20530917-20530936 | MS.gene43291:CDS | 40.0% | |
AATGTCACACTCAGTTCCAA+TGG | - | chr8.4:20528289-20528308 | None:intergenic | 40.0% | |
ACTATGACGATGAGCAATAC+CGG | - | chr8.4:20531837-20531856 | None:intergenic | 40.0% | |
AGATAGTGTCTCCACCAATT+GGG | - | chr8.4:20530686-20530705 | None:intergenic | 40.0% | |
AGCGGCATGAATTTCAATAG+TGG | + | chr8.4:20530115-20530134 | MS.gene43291:intron | 40.0% | |
AGTTGTTCATCTGGTGATTG+TGG | - | chr8.4:20532612-20532631 | None:intergenic | 40.0% | |
ATCATCGTCAACAGTAAGCA+TGG | - | chr8.4:20530586-20530605 | None:intergenic | 40.0% | |
ATGTCCAAACCACCTACTAT+AGG | - | chr8.4:20528772-20528791 | None:intergenic | 40.0% | |
ATTGGAACTGAGTGTGACAT+TGG | + | chr8.4:20528288-20528307 | MS.gene43291:CDS | 40.0% | |
CAAACAAACTTCCCGTGATA+AGG | + | chr8.4:20529821-20529840 | MS.gene43291:intron | 40.0% | |
CAAACCTCAGAACGAAGATA+AGG | - | chr8.4:20532262-20532281 | None:intergenic | 40.0% | |
CAACAGTTACTGCATCTTGA+AGG | - | chr8.4:20530656-20530675 | None:intergenic | 40.0% | |
CAAGATGCAGTAACTGTTGT+GGG | + | chr8.4:20530657-20530676 | MS.gene43291:CDS | 40.0% | |
CAAGCCATATTCCACTAAGT+GGG | - | chr8.4:20529014-20529033 | None:intergenic | 40.0% | |
CAGGATTATGAGAAGAATGG+AGG | + | chr8.4:20531022-20531041 | MS.gene43291:CDS | 40.0% | |
CATGTATAAACAGTACGGGA+AGG | + | chr8.4:20532533-20532552 | MS.gene43291:intron | 40.0% | |
CCCATTGCTAAAGAATCTAC+AGG | - | chr8.4:20528807-20528826 | None:intergenic | 40.0% | |
CCCTCGTATTATATCATTGC+AGG | + | chr8.4:20532211-20532230 | MS.gene43291:CDS | 40.0% | |
CTCCACATCTTCATGTTTGA+GGG | - | chr8.4:20530957-20530976 | None:intergenic | 40.0% | |
CTCCATTCTTCTCATAATCC+TGG | - | chr8.4:20531024-20531043 | None:intergenic | 40.0% | |
CTGGTGGCTGATATTAACAT+CGG | + | chr8.4:20532735-20532754 | MS.gene43291:CDS | 40.0% | |
GACAACATTAGAGAGAGAGT+TGG | + | chr8.4:20528739-20528758 | MS.gene43291:intron | 40.0% | |
GAGAAGAATGGAGGATATAC+TGG | + | chr8.4:20531031-20531050 | MS.gene43291:CDS | 40.0% | |
GATTCATGGGACATTGGATT+GGG | + | chr8.4:20528438-20528457 | MS.gene43291:intron | 40.0% | |
GCAATGATATAATACGAGGG+AGG | - | chr8.4:20532211-20532230 | None:intergenic | 40.0% | |
GCACCAGAGAAAGAAGAAAA+CGG | - | chr8.4:20530052-20530071 | None:intergenic | 40.0% | |
GGAAAATCCTGATCTACGAA+TGG | + | chr8.4:20531211-20531230 | MS.gene43291:CDS | 40.0% | |
GGACCTGCATTTAATGGTAA+AGG | + | chr8.4:20530905-20530924 | MS.gene43291:CDS | 40.0% | |
GGCATGAAATCTGATCAGAA+AGG | + | chr8.4:20531239-20531258 | MS.gene43291:CDS | 40.0% | |
GGGAGTAGTCAAATCATTAG+AGG | + | chr8.4:20528840-20528859 | MS.gene43291:intron | 40.0% | |
GGTTTCAAAACCTGAGATTC+AGG | - | chr8.4:20531296-20531315 | None:intergenic | 40.0% | |
GTAAAGGACCTCGCAAAAAA+TGG | - | chr8.4:20528520-20528539 | None:intergenic | 40.0% | |
GTACTGGGTTTGTGATAAGT+GGG | + | chr8.4:20528166-20528185 | MS.gene43291:CDS | 40.0% | |
GTCTTGCGTGCTTAGAAAAA+TGG | + | chr8.4:20533017-20533036 | MS.gene43291:intron | 40.0% | |
GTGGCTCATTTAATGTATCC+TGG | + | chr8.4:20530820-20530839 | MS.gene43291:intron | 40.0% | |
GTTTGTGATAAGTGGGAAGA+GGG | + | chr8.4:20528173-20528192 | MS.gene43291:CDS | 40.0% | |
TAATGGTAAAGGAACCTGTG+TGG | + | chr8.4:20530916-20530935 | MS.gene43291:CDS | 40.0% | |
TATAGGATTCCCTATTCTCG+GGG | + | chr8.4:20531172-20531191 | MS.gene43291:intron | 40.0% | |
TATCAACCCCATCAAAGCTA+AGG | - | chr8.4:20531331-20531350 | None:intergenic | 40.0% | |
TCAAGATGCAGTAACTGTTG+TGG | + | chr8.4:20530656-20530675 | MS.gene43291:CDS | 40.0% | |
TCGACAATCTCTCCCATATA+GGG | - | chr8.4:20528041-20528060 | None:intergenic | 40.0% | |
TCTCCACATCTTCATGTTTG+AGG | - | chr8.4:20530958-20530977 | None:intergenic | 40.0% | |
TCTTTGACACATATAGGTGC+TGG | + | chr8.4:20532716-20532735 | MS.gene43291:intron | 40.0% | |
TGATTCATGGGACATTGGAT+TGG | + | chr8.4:20528437-20528456 | MS.gene43291:intron | 40.0% | |
TGCATAATGAGATCTAGGAG+TGG | - | chr8.4:20531871-20531890 | None:intergenic | 40.0% | |
TGTCAAAGATGAACAGAGGA+GGG | - | chr8.4:20530243-20530262 | None:intergenic | 40.0% | |
TGTTGCAAGAATATCTAGCG+TGG | - | chr8.4:20533113-20533132 | None:intergenic | 40.0% | |
TGTTGTATGTGACAGAGTGT+TGG | + | chr8.4:20528624-20528643 | MS.gene43291:intron | 40.0% | |
TTGTCAAAGATGAACAGAGG+AGG | - | chr8.4:20530244-20530263 | None:intergenic | 40.0% | |
TTGTGAGCAACAATCAAGCA+AGG | - | chr8.4:20529183-20529202 | None:intergenic | 40.0% | |
! | AGTACTGGGTTTGTGATAAG+TGG | + | chr8.4:20528165-20528184 | MS.gene43291:CDS | 40.0% |
! | CTACCGTTTTCTTCTTTCTC+TGG | + | chr8.4:20530046-20530065 | MS.gene43291:intron | 40.0% |
! | CTTATCACGGGAAGTTTGTT+TGG | - | chr8.4:20529823-20529842 | None:intergenic | 40.0% |
! | GATATTGCCAATGATGGAAC+AGG | + | chr8.4:20531347-20531366 | MS.gene43291:CDS | 40.0% |
! | GTTGTATGTGACAGAGTGTT+GGG | + | chr8.4:20528625-20528644 | MS.gene43291:intron | 40.0% |
! | TCTGTATTTCTGAAGGTCGT+TGG | + | chr8.4:20532875-20532894 | MS.gene43291:intron | 40.0% |
! | TGAAGCTCCAGTCAAGATTT+TGG | + | chr8.4:20532566-20532585 | MS.gene43291:CDS | 40.0% |
! | TGGAGGATATACTGGTAATG+TGG | + | chr8.4:20531039-20531058 | MS.gene43291:intron | 40.0% |
! | TTCTGTGGAGCATTATACTC+AGG | + | chr8.4:20528212-20528231 | MS.gene43291:CDS | 40.0% |
! | TTTTTGCGAGGTCCTTTACA+GGG | + | chr8.4:20528521-20528540 | MS.gene43291:intron | 40.0% |
!! | CACCACTAGTTGATGAAAGT+GGG | - | chr8.4:20530803-20530822 | None:intergenic | 40.0% |
!! | CAGTATAGCTCTAGTAGTAC+TGG | + | chr8.4:20528150-20528169 | MS.gene43291:CDS | 40.0% |
!!! | CTCAAGTTCCATTTTTTGCG+AGG | + | chr8.4:20528509-20528528 | MS.gene43291:intron | 40.0% |
!!! | CTGAAGGTCGTTGGTTTTAA+TGG | + | chr8.4:20532884-20532903 | MS.gene43291:intron | 40.0% |
!!! | TTTTTTGCGAGGTCCTTTAC+AGG | + | chr8.4:20528520-20528539 | MS.gene43291:intron | 40.0% |
AACACTGTAACCTGTGTAGC+AGG | - | chr8.4:20530169-20530188 | None:intergenic | 45.0% | |
AATACGTGATACAACGCCAC+TGG | - | chr8.4:20530715-20530734 | None:intergenic | 45.0% | |
ACCTGAGATTCAGGAGAAGT+AGG | - | chr8.4:20531287-20531306 | None:intergenic | 45.0% | |
AGAAGTTCAGCAACCAATCC+GGG | - | chr8.4:20530518-20530537 | None:intergenic | 45.0% | |
AGAGTTATCAGCGTCCAACA+TGG | - | chr8.4:20532819-20532838 | None:intergenic | 45.0% | |
AGATCGTCAGACATTGCTGA+TGG | - | chr8.4:20533145-20533164 | None:intergenic | 45.0% | |
AGATGGACAGATATGGAGAC+TGG | - | chr8.4:20531718-20531737 | None:intergenic | 45.0% | |
AGCAATGGGAGTAGATCAGA+TGG | + | chr8.4:20528818-20528837 | MS.gene43291:intron | 45.0% | |
AGCACCTATAGTAGGTGGTT+TGG | + | chr8.4:20528765-20528784 | MS.gene43291:intron | 45.0% | |
AGCAGAGAACAACATAGGCA+AGG | - | chr8.4:20531909-20531928 | None:intergenic | 45.0% | |
AGCTACTAAAACACCCCTCA+TGG | + | chr8.4:20531433-20531452 | MS.gene43291:intron | 45.0% | |
AGGACGGCCAAAATGAACAA+AGG | - | chr8.4:20530287-20530306 | None:intergenic | 45.0% | |
AGGATGTTGCATTGAATGCG+TGG | + | chr8.4:20528688-20528707 | MS.gene43291:intron | 45.0% | |
AGTTCCAATGGCAAGAACAG+TGG | - | chr8.4:20528277-20528296 | None:intergenic | 45.0% | |
ATCACAGCTCTCTACCATTG+CGG | - | chr8.4:20532939-20532958 | None:intergenic | 45.0% | |
ATGCTCCACAGAATGTGCAT+TGG | - | chr8.4:20528205-20528224 | None:intergenic | 45.0% | |
ATGGTAAAGGAACCTGTGTG+GGG | + | chr8.4:20530918-20530937 | MS.gene43291:CDS | 45.0% | |
ATTGAATGCGTGGTAGGACT+AGG | + | chr8.4:20528698-20528717 | MS.gene43291:intron | 45.0% | |
CAACCCCACTTAGTGGAATA+TGG | + | chr8.4:20529007-20529026 | MS.gene43291:intron | 45.0% | |
CAATGGGAGTAGATCAGATG+GGG | + | chr8.4:20528820-20528839 | MS.gene43291:intron | 45.0% | |
CACAGAGCTTCTAGGTTTAC+AGG | + | chr8.4:20530761-20530780 | MS.gene43291:CDS | 45.0% | |
CACCCACTTTCATCAACTAG+TGG | + | chr8.4:20530798-20530817 | MS.gene43291:intron | 45.0% | |
CAGGTTAAGCTCAAGAAACG+TGG | + | chr8.4:20528231-20528250 | MS.gene43291:CDS | 45.0% | |
CATATTCCACTAAGTGGGGT+TGG | - | chr8.4:20529009-20529028 | None:intergenic | 45.0% | |
CCAAGCCATATTCCACTAAG+TGG | - | chr8.4:20529015-20529034 | None:intergenic | 45.0% | |
CCACTTAGTGGAATATGGCT+TGG | + | chr8.4:20529012-20529031 | MS.gene43291:intron | 45.0% | |
CCACTTTCATCAACTAGTGG+TGG | + | chr8.4:20530801-20530820 | MS.gene43291:intron | 45.0% | |
CCTGATCTACGAATGGCAAT+GGG | + | chr8.4:20531218-20531237 | MS.gene43291:CDS | 45.0% | |
CTGTAAACCTAGAAGCTCTG+TGG | - | chr8.4:20530763-20530782 | None:intergenic | 45.0% | |
CTGTTGACGATGATGAGTTC+TGG | + | chr8.4:20530592-20530611 | MS.gene43291:CDS | 45.0% | |
CTTATTCCAGCACACAGCAA+GGG | + | chr8.4:20532181-20532200 | MS.gene43291:CDS | 45.0% | |
GAGAAGTTCAGCAACCAATC+CGG | - | chr8.4:20530519-20530538 | None:intergenic | 45.0% | |
GAGATAGTGTCTCCACCAAT+TGG | - | chr8.4:20530687-20530706 | None:intergenic | 45.0% | |
GAGCTCTTCACTGAAGTTCA+AGG | - | chr8.4:20531649-20531668 | None:intergenic | 45.0% | |
GCAATGGGAGTAGATCAGAT+GGG | + | chr8.4:20528819-20528838 | MS.gene43291:intron | 45.0% | |
GCTACTAAAACACCCCTCAT+GGG | + | chr8.4:20531434-20531453 | MS.gene43291:intron | 45.0% | |
GGTTCCTTATCTTCGTTCTG+AGG | + | chr8.4:20532255-20532274 | MS.gene43291:CDS | 45.0% | |
GGTTTGTGATAAGTGGGAAG+AGG | + | chr8.4:20528172-20528191 | MS.gene43291:CDS | 45.0% | |
GTCCCTCAAACATGAAGATG+TGG | + | chr8.4:20530952-20530971 | MS.gene43291:CDS | 45.0% | |
GTCGACAATCTCTCCCATAT+AGG | - | chr8.4:20528042-20528061 | None:intergenic | 45.0% | |
GTTACTGCATCTTGAAGGGT+AGG | - | chr8.4:20530651-20530670 | None:intergenic | 45.0% | |
GTTGGAGTAGCACCTATAGT+AGG | + | chr8.4:20528757-20528776 | MS.gene43291:intron | 45.0% | |
TCCTACTTCTCCTGAATCTC+AGG | + | chr8.4:20531283-20531302 | MS.gene43291:CDS | 45.0% | |
TCCTGATCTACGAATGGCAA+TGG | + | chr8.4:20531217-20531236 | MS.gene43291:CDS | 45.0% | |
TCGAGTCATAGGTCTAGATG+CGG | + | chr8.4:20529643-20529662 | MS.gene43291:intron | 45.0% | |
TCTCACCAATGCACATTCTG+TGG | + | chr8.4:20528197-20528216 | MS.gene43291:CDS | 45.0% | |
TGAAGAGATCGTTAACACCC+AGG | + | chr8.4:20532761-20532780 | MS.gene43291:CDS | 45.0% | |
TGCCATGGAAGCGAAAAGTT+CGG | - | chr8.4:20528120-20528139 | None:intergenic | 45.0% | |
TGTTGCATTGAATGCGTGGT+AGG | + | chr8.4:20528692-20528711 | MS.gene43291:intron | 45.0% | |
TGTTGGACGCTGATAACTCT+TGG | + | chr8.4:20532819-20532838 | MS.gene43291:intron | 45.0% | |
TTTCCAGTTCCATTTCGCCA+TGG | + | chr8.4:20532037-20532056 | MS.gene43291:intron | 45.0% | |
! | AACCGAACTTTTCGCTTCCA+TGG | + | chr8.4:20528115-20528134 | MS.gene43291:CDS | 45.0% |
! | ACGATGATGAGTTCTGGCAA+GGG | + | chr8.4:20530598-20530617 | MS.gene43291:CDS | 45.0% |
! | CACTGATTGCTGGCCATTAT+GGG | + | chr8.4:20530324-20530343 | MS.gene43291:intron | 45.0% |
! | TCTGGTGGACCTGCATTTAA+TGG | + | chr8.4:20530899-20530918 | MS.gene43291:CDS | 45.0% |
!! | CCACCACTAGTTGATGAAAG+TGG | - | chr8.4:20530804-20530823 | None:intergenic | 45.0% |
!! | GGGGTTGATATTGCCAATGA+TGG | + | chr8.4:20531341-20531360 | MS.gene43291:CDS | 45.0% |
!! | GTTAACTAACCAGCTTGCTG+CGG | + | chr8.4:20531943-20531962 | MS.gene43291:intron | 45.0% |
!! | TAAGTGAGGGTACCTGCATA+TGG | + | chr8.4:20529350-20529369 | MS.gene43291:intron | 45.0% |
!! | TTGACACATATAGGTGCTGG+TGG | + | chr8.4:20532719-20532738 | MS.gene43291:intron | 45.0% |
AATGGCCAGCAATCAGTGGT+GGG | - | chr8.4:20530322-20530341 | None:intergenic | 50.0% | |
ACTAAAACACCCCTCATGGG+AGG | + | chr8.4:20531437-20531456 | MS.gene43291:intron | 50.0% | |
ATCACATAAACCGCGTGAGG+AGG | - | chr8.4:20528547-20528566 | None:intergenic | 50.0% | |
ATCCACGTGGATCGAGTCAT+AGG | + | chr8.4:20529632-20529651 | MS.gene43291:intron | 50.0% | |
ATGGGAGAGATTGTCGACGA+GGG | + | chr8.4:20528044-20528063 | MS.gene43291:CDS | 50.0% | |
ATGTAGCCAACCCCACTTAG+TGG | + | chr8.4:20529000-20529019 | MS.gene43291:intron | 50.0% | |
CAAGAGGAGACACGAAACTC+CGG | + | chr8.4:20531815-20531834 | MS.gene43291:intron | 50.0% | |
CATGGTTCCACAGAGCTTCT+AGG | + | chr8.4:20530753-20530772 | MS.gene43291:CDS | 50.0% | |
CCATAATGGCCAGCAATCAG+TGG | - | chr8.4:20530326-20530345 | None:intergenic | 50.0% | |
CCATGTATGAGTTGTGGGTG+AGG | + | chr8.4:20529124-20529143 | MS.gene43291:intron | 50.0% | |
CCCATTGCCATTCGTAGATC+AGG | - | chr8.4:20531221-20531240 | None:intergenic | 50.0% | |
CCTCACCCACAACTCATACA+TGG | - | chr8.4:20529127-20529146 | None:intergenic | 50.0% | |
CGTATCACATAAACCGCGTG+AGG | - | chr8.4:20528550-20528569 | None:intergenic | 50.0% | |
CTAGAAGCTCTGTGGAACCA+TGG | - | chr8.4:20530755-20530774 | None:intergenic | 50.0% | |
CTGAAATGCTATCCCCACAC+AGG | - | chr8.4:20530933-20530952 | None:intergenic | 50.0% | |
GAATCTAGGAGGGCTTTGCA+AGG | - | chr8.4:20529713-20529732 | None:intergenic | 50.0% | |
GACACTATCTCTGTGACCAG+TGG | + | chr8.4:20530696-20530715 | MS.gene43291:CDS | 50.0% | |
GACAGATATGGAGACTGGAG+AGG | - | chr8.4:20531713-20531732 | None:intergenic | 50.0% | |
GCCATTATGGGAGCTTTCGT+GGG | + | chr8.4:20530336-20530355 | MS.gene43291:intron | 50.0% | |
GCTTATTCCAGCACACAGCA+AGG | + | chr8.4:20532180-20532199 | MS.gene43291:CDS | 50.0% | |
GGAGTAGCACCTATAGTAGG+TGG | + | chr8.4:20528760-20528779 | MS.gene43291:intron | 50.0% | |
TAATGGCCAGCAATCAGTGG+TGG | - | chr8.4:20530323-20530342 | None:intergenic | 50.0% | |
TACTGTCTCTTCCTCTGCCA+TGG | - | chr8.4:20528135-20528154 | None:intergenic | 50.0% | |
TATGGGAGAGATTGTCGACG+AGG | + | chr8.4:20528043-20528062 | MS.gene43291:CDS | 50.0% | |
TCTCCATGGCGAAATGGAAC+TGG | - | chr8.4:20532043-20532062 | None:intergenic | 50.0% | |
TCTTAAGAGCTTGGCCGCAA+TGG | + | chr8.4:20532922-20532941 | MS.gene43291:CDS | 50.0% | |
TGAAACCAATGCGCTCTCCA+TGG | - | chr8.4:20532057-20532076 | None:intergenic | 50.0% | |
TGTGGTCTAACACCACTCCA+CGG | + | chr8.4:20530479-20530498 | MS.gene43291:intron | 50.0% | |
TTCACCACCGAATCCATCGA+AGG | - | chr8.4:20528075-20528094 | None:intergenic | 50.0% | |
TTGGCCACTGTTCTTGCCAT+TGG | + | chr8.4:20528270-20528289 | MS.gene43291:CDS | 50.0% | |
TTTCGTGGGCTCACACTTGT+TGG | + | chr8.4:20530350-20530369 | MS.gene43291:intron | 50.0% | |
! | ACTGTTGTGGGCTACCCAAT+TGG | + | chr8.4:20530669-20530688 | MS.gene43291:CDS | 50.0% |
! | ACTTTTCGCTTCCATGGCAG+AGG | + | chr8.4:20528121-20528140 | MS.gene43291:CDS | 50.0% |
! | CCACTGATTGCTGGCCATTA+TGG | + | chr8.4:20530323-20530342 | MS.gene43291:intron | 50.0% |
! | CTTTTGCAGTCTTCGTGCGA+AGG | - | chr8.4:20533087-20533106 | None:intergenic | 50.0% |
! | GACGATGATGAGTTCTGGCA+AGG | + | chr8.4:20530597-20530616 | MS.gene43291:CDS | 50.0% |
! | GATGTCGCCTGTGGATTTTG+GGG | + | chr8.4:20530620-20530639 | MS.gene43291:CDS | 50.0% |
! | GGATGTCGCCTGTGGATTTT+GGG | + | chr8.4:20530619-20530638 | MS.gene43291:CDS | 50.0% |
! | GGTGTTGCCTTCGATGGATT+CGG | + | chr8.4:20528065-20528084 | MS.gene43291:CDS | 50.0% |
!! | TTCATTTTGGCCGTCCTCAC+AGG | + | chr8.4:20530290-20530309 | MS.gene43291:intron | 50.0% |
AATGCGTGGTAGGACTAGGC+GGG | + | chr8.4:20528702-20528721 | MS.gene43291:intron | 55.0% | |
ACATGCCTGTTGTCGCTCTG+TGG | + | chr8.4:20530195-20530214 | MS.gene43291:intron | 55.0% | |
ATGCGCTCTCCATGGCGAAA+TGG | - | chr8.4:20532049-20532068 | None:intergenic | 55.0% | |
CAGCAACCAATCCGGGATAG+CGG | - | chr8.4:20530511-20530530 | None:intergenic | 55.0% | |
CCAAACCACAGAGCGACAAC+AGG | - | chr8.4:20530203-20530222 | None:intergenic | 55.0% | |
CCTGTTGTCGCTCTGTGGTT+TGG | + | chr8.4:20530200-20530219 | MS.gene43291:intron | 55.0% | |
CGGGGTTGAGTGGCAGAAAA+TGG | + | chr8.4:20531190-20531209 | MS.gene43291:CDS | 55.0% | |
CTAGGAGGGCTTTGCAAGGA+CGG | - | chr8.4:20529709-20529728 | None:intergenic | 55.0% | |
GAATGCGTGGTAGGACTAGG+CGG | + | chr8.4:20528701-20528720 | MS.gene43291:intron | 55.0% | |
GACCTATGACTCGATCCACG+TGG | - | chr8.4:20529637-20529656 | None:intergenic | 55.0% | |
GCCACTCAACCCCGAGAATA+GGG | - | chr8.4:20531184-20531203 | None:intergenic | 55.0% | |
GCCCACGAAAGCTCCCATAA+TGG | - | chr8.4:20530340-20530359 | None:intergenic | 55.0% | |
GGCAACTCCCCAAAATCCAC+AGG | - | chr8.4:20530630-20530649 | None:intergenic | 55.0% | |
GGCCATTATGGGAGCTTTCG+TGG | + | chr8.4:20530335-20530354 | MS.gene43291:intron | 55.0% | |
GTGTTGCAGCACACTGTAGC+TGG | + | chr8.4:20530137-20530156 | MS.gene43291:intron | 55.0% | |
TAGGAGGGCTTTGCAAGGAC+GGG | - | chr8.4:20529708-20529727 | None:intergenic | 55.0% | |
TCCCTATTCTCGGGGTTGAG+TGG | + | chr8.4:20531180-20531199 | MS.gene43291:CDS | 55.0% | |
TGCCACTCAACCCCGAGAAT+AGG | - | chr8.4:20531185-20531204 | None:intergenic | 55.0% | |
TTGCAGCACACTGTAGCTGG+TGG | + | chr8.4:20530140-20530159 | MS.gene43291:intron | 55.0% | |
! | GGGATGTCGCCTGTGGATTT+TGG | + | chr8.4:20530618-20530637 | MS.gene43291:CDS | 55.0% |
! | GTTGCCTTCGATGGATTCGG+TGG | + | chr8.4:20528068-20528087 | MS.gene43291:CDS | 55.0% |
! | GTTGTGGGCTACCCAATTGG+TGG | + | chr8.4:20530672-20530691 | MS.gene43291:CDS | 55.0% |
! | TTGTGCCCACCACTGATTGC+TGG | + | chr8.4:20530314-20530333 | MS.gene43291:intron | 55.0% |
! | TTTCGCCATGGAGAGCGCAT+TGG | + | chr8.4:20532049-20532068 | MS.gene43291:CDS | 55.0% |
AACCGGCAAGTCCTCCCATG+AGG | - | chr8.4:20531451-20531470 | None:intergenic | 60.0% | |
ACCGGCAAGTCCTCCCATGA+GGG | - | chr8.4:20531450-20531469 | None:intergenic | 60.0% | |
CTGGTGGCTTCCTGCTACAC+AGG | + | chr8.4:20530156-20530175 | MS.gene43291:intron | 60.0% | |
CTTTACAGGGCCTCCTCACG+CGG | + | chr8.4:20528534-20528553 | MS.gene43291:intron | 60.0% | |
TGGGCACAAGCCTGTGAGGA+CGG | - | chr8.4:20530303-20530322 | None:intergenic | 60.0% | |
!! | GACGAGGGTGTTGCCTTCGA+TGG | + | chr8.4:20528059-20528078 | MS.gene43291:CDS | 60.0% |
CCCCTCATGGGAGGACTTGC+CGG | + | chr8.4:20531446-20531465 | MS.gene43291:intron | 65.0% | |
CCGGCAAGTCCTCCCATGAG+GGG | - | chr8.4:20531449-20531468 | None:intergenic | 65.0% | |
CGCGTGAGGAGGCCCTGTAA+AGG | - | chr8.4:20528536-20528555 | None:intergenic | 65.0% | |
CTGGCAAGGGATGTCGCCTG+TGG | + | chr8.4:20530611-20530630 | MS.gene43291:CDS | 65.0% | |
TCACGTTGGCCGCAGCAAGC+TGG | - | chr8.4:20531955-20531974 | None:intergenic | 65.0% | |
! | CCAATCCGGGATAGCGGCAC+AGG | - | chr8.4:20530505-20530524 | None:intergenic | 65.0% |
! | CCTGTGCCGCTATCCCGGAT+TGG | + | chr8.4:20530502-20530521 | MS.gene43291:intron | 65.0% |
! | GGCTTGCCCTTGCTGTGTGC+TGG | - | chr8.4:20532190-20532209 | None:intergenic | 65.0% |
!! | GTGGTGGGCACAAGCCTGTG+AGG | - | chr8.4:20530307-20530326 | None:intergenic | 65.0% |
TAGCGGCACAGGCCGTGGAG+TGG | - | chr8.4:20530494-20530513 | None:intergenic | 70.0% | |
! | CACGGCCTGTGCCGCTATCC+CGG | + | chr8.4:20530497-20530516 | MS.gene43291:intron | 70.0% |
! | CGGGATAGCGGCACAGGCCG+TGG | - | chr8.4:20530499-20530518 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 20528027 | 20533174 | 20528027 | ID=MS.gene43291 |
chr8.4 | mRNA | 20528027 | 20533174 | 20528027 | ID=MS.gene43291.t1;Parent=MS.gene43291 |
chr8.4 | exon | 20528027 | 20528309 | 20528027 | ID=MS.gene43291.t1.exon1;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20528027 | 20528309 | 20528027 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20530583 | 20530782 | 20530583 | ID=MS.gene43291.t1.exon2;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20530583 | 20530782 | 20530583 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20530872 | 20531052 | 20530872 | ID=MS.gene43291.t1.exon3;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20530872 | 20531052 | 20530872 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20531177 | 20531368 | 20531177 | ID=MS.gene43291.t1.exon4;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20531177 | 20531368 | 20531177 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20532044 | 20532276 | 20532044 | ID=MS.gene43291.t1.exon5;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20532044 | 20532276 | 20532044 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20532546 | 20532647 | 20532546 | ID=MS.gene43291.t1.exon6;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20532546 | 20532647 | 20532546 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20532732 | 20532782 | 20532732 | ID=MS.gene43291.t1.exon7;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20532732 | 20532782 | 20532732 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20532890 | 20532994 | 20532890 | ID=MS.gene43291.t1.exon8;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20532890 | 20532994 | 20532890 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
chr8.4 | exon | 20533076 | 20533174 | 20533076 | ID=MS.gene43291.t1.exon9;Parent=MS.gene43291.t1 |
chr8.4 | CDS | 20533076 | 20533174 | 20533076 | ID=cds.MS.gene43291.t1;Parent=MS.gene43291.t1 |
Gene Sequence |
Protein sequence |