Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44409.t1 | XP_003592706.1 | 98.2 | 606 | 5 | 1 | 56 | 655 | 1 | 606 | 0.00E+00 | 1188.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44409.t1 | Q8LPJ4 | 89.4 | 606 | 57 | 2 | 56 | 655 | 1 | 605 | 0.0e+00 | 1088.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44409.t1 | G7IE72 | 98.2 | 606 | 5 | 1 | 56 | 655 | 1 | 606 | 0.0e+00 | 1188.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44409 | MS.gene68299 | PPI |
| MS.gene44915 | MS.gene44409 | PPI |
| MS.gene027546 | MS.gene44409 | PPI |
| MS.gene44409 | MS.gene56742 | PPI |
| MS.gene43933 | MS.gene44409 | PPI |
| MS.gene44409 | MS.gene20554 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44409.t1 | MTR_1g114170 | 98.185 | 606 | 5 | 1 | 56 | 655 | 1 | 606 | 0.0 | 1227 |
| MS.gene44409.t1 | MTR_1g025075 | 94.234 | 607 | 28 | 2 | 56 | 655 | 1 | 607 | 0.0 | 1182 |
| MS.gene44409.t1 | MTR_4g007890 | 85.714 | 602 | 78 | 3 | 60 | 655 | 1 | 600 | 0.0 | 1061 |
| MS.gene44409.t1 | MTR_1g025075 | 94.716 | 511 | 21 | 1 | 151 | 655 | 17 | 527 | 0.0 | 998 |
| MS.gene44409.t1 | MTR_1g024860 | 84.162 | 543 | 71 | 4 | 56 | 597 | 1 | 529 | 0.0 | 922 |
| MS.gene44409.t1 | MTR_1g024860 | 28.458 | 253 | 129 | 8 | 423 | 650 | 103 | 328 | 3.71e-22 | 100 |
| MS.gene44409.t1 | MTR_1567s0010 | 28.571 | 196 | 124 | 6 | 410 | 594 | 245 | 435 | 2.09e-12 | 70.1 |
| MS.gene44409.t1 | MTR_3g095010 | 29.586 | 169 | 104 | 5 | 426 | 589 | 461 | 619 | 6.64e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44409.t1 | AT4G19210 | 89.439 | 606 | 57 | 2 | 56 | 655 | 1 | 605 | 0.0 | 1125 |
| MS.gene44409.t1 | AT3G13640 | 77.063 | 606 | 130 | 2 | 56 | 655 | 1 | 603 | 0.0 | 983 |
| MS.gene44409.t1 | AT4G30300 | 66.477 | 176 | 56 | 3 | 404 | 577 | 1 | 175 | 3.70e-70 | 226 |
| MS.gene44409.t1 | AT4G33460 | 29.787 | 188 | 104 | 8 | 151 | 330 | 66 | 233 | 8.76e-12 | 66.6 |
| MS.gene44409.t1 | AT4G33460 | 30.000 | 180 | 113 | 6 | 423 | 594 | 70 | 244 | 5.67e-11 | 64.3 |
| MS.gene44409.t1 | AT3G55100 | 27.094 | 203 | 122 | 5 | 156 | 341 | 60 | 253 | 4.92e-11 | 66.2 |
| MS.gene44409.t1 | AT3G55100 | 27.094 | 203 | 122 | 5 | 156 | 341 | 60 | 253 | 4.92e-11 | 66.2 |
Find 158 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCGGCAAGTTGATAATT+TGG | 0.141900 | 1.1:+80296931 | None:intergenic |
| CGTAATGTTGGTGATCTTTC+AGG | 0.171930 | 1.1:-80295661 | MS.gene44409:CDS |
| CAAGAGGTTCAGAATCTTTC+TGG | 0.182659 | 1.1:-80293703 | MS.gene44409:CDS |
| ACATGTATATCTCAGCATTT+TGG | 0.193506 | 1.1:+80295599 | None:intergenic |
| CCAAAACTCAAGGCAATTTC+AGG | 0.203901 | 1.1:-80294103 | MS.gene44409:CDS |
| GCAATTCAGATCCTCGAAAA+TGG | 0.208418 | 1.1:+80296526 | None:intergenic |
| GACTTTATTTGCTGTTTATA+TGG | 0.218246 | 1.1:-80295327 | MS.gene44409:CDS |
| GCAAGTGTCTAACAGATAAT+TGG | 0.222574 | 1.1:+80293812 | None:intergenic |
| CCTGAAATTGCCTTGAGTTT+TGG | 0.257880 | 1.1:+80294103 | None:intergenic |
| GTGCTTGAGCAGTGGGATTC+AGG | 0.261696 | 1.1:+80298682 | None:intergenic |
| CGAGCACGATCTTAGTGTTT+TGG | 0.269250 | 1.1:-80295361 | MS.gene44409:CDS |
| TATCAACTTGCCGAAGGATT+TGG | 0.275167 | 1.1:-80296925 | MS.gene44409:CDS |
| TGATGAACCTTCCAGTTATC+TGG | 0.286678 | 1.1:-80295575 | MS.gene44409:CDS |
| TTGTTCCAACAGAAAATCTT+AGG | 0.290058 | 1.1:-80295230 | MS.gene44409:CDS |
| GTCGACTGCACTTAAGGTTT+TGG | 0.295828 | 1.1:-80296704 | MS.gene44409:CDS |
| CAACAGAAAATCTTAGGTTT+CGG | 0.312251 | 1.1:-80295224 | MS.gene44409:CDS |
| TCATCACATCTGATATAAAC+TGG | 0.317044 | 1.1:+80293755 | None:intergenic |
| AACAGAAAATCTTAGGTTTC+GGG | 0.326990 | 1.1:-80295223 | MS.gene44409:CDS |
| ACCAAGCACTTGCCCCGGCC+TGG | 0.332750 | 1.1:+80296753 | None:intergenic |
| TAATTATAATTGCAGGTTGC+CGG | 0.348977 | 1.1:-80296779 | MS.gene44409:intron |
| CTGTGTAGCTTAAAAGTATT+AGG | 0.350689 | 1.1:+80296876 | None:intergenic |
| GGGCAAGTGCTTGGTTTGGT+TGG | 0.352472 | 1.1:-80296745 | MS.gene44409:CDS |
| CCCAGGCCGGGGCAAGTGCT+TGG | 0.354601 | 1.1:-80296754 | MS.gene44409:CDS |
| GGCAAGTGCTTGGTTTGGTT+GGG | 0.358646 | 1.1:-80296744 | MS.gene44409:CDS |
| GAAATCGTGCTCAACGATAA+AGG | 0.366245 | 1.1:+80292854 | None:intergenic |
| GGAGGTTTCTCTTACTTTCA+AGG | 0.366509 | 1.1:-80295202 | MS.gene44409:intron |
| ACTACTTATTGAACAGTTGA+TGG | 0.367488 | 1.1:-80293728 | MS.gene44409:CDS |
| GTCAAAATTTCCTGCCAATC+AGG | 0.370858 | 1.1:+80296549 | None:intergenic |
| CTGTTTCACATCCAGATAAC+TGG | 0.373313 | 1.1:+80295564 | None:intergenic |
| TGGGAAGTCGACTGCACTTA+AGG | 0.380143 | 1.1:-80296710 | MS.gene44409:CDS |
| CAGGTTGCCGGTTCCCAGGC+CGG | 0.381117 | 1.1:-80296767 | MS.gene44409:CDS |
| TTGGTTGGGACAAATGGAAT+TGG | 0.383851 | 1.1:-80296730 | MS.gene44409:CDS |
| CTTGGTTTGGTTGGGACAAA+TGG | 0.384149 | 1.1:-80296736 | MS.gene44409:CDS |
| GCCGGGGCAAGTGCTTGGTT+TGG | 0.387478 | 1.1:-80296749 | MS.gene44409:CDS |
| GGAAATTAAACAAACCTATT+GGG | 0.388964 | 1.1:+80295502 | None:intergenic |
| AGGTTGCCGGTTCCCAGGCC+GGG | 0.393335 | 1.1:-80296766 | MS.gene44409:CDS |
| ACTTGCCCCGGCCTGGGAAC+CGG | 0.394610 | 1.1:+80296760 | None:intergenic |
| TAACAGATAATTGGGACTTT+GGG | 0.395339 | 1.1:+80293821 | None:intergenic |
| TGGTTGGGACAAATGGAATT+GGG | 0.399770 | 1.1:-80296729 | MS.gene44409:CDS |
| GATTCAAGTTTGTTGATCCT+TGG | 0.400390 | 1.1:+80292530 | None:intergenic |
| ATTCAAGTTTGTTGATCCTT+GGG | 0.401478 | 1.1:+80292531 | None:intergenic |
| TGCAGCAACAATACGCTGTT+CGG | 0.410104 | 1.1:+80292917 | None:intergenic |
| ATCCTTGGGCGGAAATTAGT+TGG | 0.412838 | 1.1:+80292545 | None:intergenic |
| CTAACAGATAATTGGGACTT+TGG | 0.418945 | 1.1:+80293820 | None:intergenic |
| TGGAAAATTGAAGCCCAACT+TGG | 0.425877 | 1.1:-80296680 | MS.gene44409:CDS |
| CAAGTGTCTAACAGATAATT+GGG | 0.435174 | 1.1:+80293813 | None:intergenic |
| ATTCCTTCTCTGACTGAGAA+AGG | 0.437002 | 1.1:+80295273 | None:intergenic |
| GGTCATTGCTCAGGCCCAAT+AGG | 0.438087 | 1.1:-80295516 | MS.gene44409:intron |
| GGAATTAATATCTTCTTGTC+CGG | 0.438408 | 1.1:-80295255 | MS.gene44409:CDS |
| TTGAAACCTGACACTATAGA+AGG | 0.440943 | 1.1:-80293901 | MS.gene44409:CDS |
| GTAATGTTGGTGATCTTTCA+GGG | 0.441278 | 1.1:-80295660 | MS.gene44409:CDS |
| CATTCTAGAGGATGATTTGA+AGG | 0.442384 | 1.1:-80296487 | MS.gene44409:CDS |
| TCCTTGGGCGGAAATTAGTT+GGG | 0.449811 | 1.1:+80292546 | None:intergenic |
| TTCAGGCTTCATGTAGTTGA+AGG | 0.451867 | 1.1:-80294086 | MS.gene44409:CDS |
| CAACCGCAATGGCAAACCTT+TGG | 0.455169 | 1.1:+80295629 | None:intergenic |
| GCAGGAACCGCCTGATTGGC+AGG | 0.457134 | 1.1:-80296559 | MS.gene44409:intron |
| TACTGTGAAACGACCCAAGT+TGG | 0.462614 | 1.1:+80296666 | None:intergenic |
| TTCACAGATTATTGTGATGC+TGG | 0.464457 | 1.1:-80294051 | MS.gene44409:CDS |
| CTAGTGTAAGGGTGCTACCT+TGG | 0.465352 | 1.1:-80298716 | MS.gene44409:CDS |
| AGTTGTCCTGTCGTCAGAAC+CGG | 0.468418 | 1.1:-80297235 | MS.gene44409:intron |
| GATCCACCTTCTATAGTGTC+AGG | 0.471777 | 1.1:+80293895 | None:intergenic |
| CAATTCAGATCCTCGAAAAT+GGG | 0.471862 | 1.1:+80296527 | None:intergenic |
| ATATCTGAGGAATTGTGTAT+TGG | 0.475022 | 1.1:-80297086 | MS.gene44409:CDS |
| GAGTATAAACTCAGTCATCT+AGG | 0.476908 | 1.1:+80292465 | None:intergenic |
| GTATCTTTGTCCAAATCCTT+CGG | 0.478826 | 1.1:+80296915 | None:intergenic |
| AAGTTGTTCGGTCATTGCTC+AGG | 0.479261 | 1.1:-80295525 | MS.gene44409:CDS |
| GGTTGCCGGTTCCCAGGCCG+GGG | 0.481360 | 1.1:-80296765 | MS.gene44409:CDS |
| TGAAAGCTGCCCAAGTTGTT+CGG | 0.481445 | 1.1:-80295537 | MS.gene44409:CDS |
| GTTGCGTTATGCCTTTGTCT+TGG | 0.482528 | 1.1:-80293664 | MS.gene44409:CDS |
| TGGATGCGGTATCTGTGTTA+AGG | 0.483465 | 1.1:-80297066 | MS.gene44409:intron |
| TTTGCAGTACAGTCAATTGA+AGG | 0.484553 | 1.1:+80292783 | None:intergenic |
| ACTGTGAAACGACCCAAGTT+GGG | 0.485280 | 1.1:+80296667 | None:intergenic |
| CCAAGCACTTGCCCCGGCCT+GGG | 0.485916 | 1.1:+80296754 | None:intergenic |
| ATTTGCAGGAACCGCCTGAT+TGG | 0.486998 | 1.1:-80296563 | MS.gene44409:intron |
| ATATATGTTTGATGAGCAGC+TGG | 0.494076 | 1.1:-80298739 | MS.gene44409:CDS |
| TAGTGTAAGGGTGCTACCTT+GGG | 0.494178 | 1.1:-80298715 | MS.gene44409:CDS |
| TAAACAGAGGGTGTGATGGC+TGG | 0.495287 | 1.1:-80298895 | None:intergenic |
| AGCATAAGTTTGAGCTTCCT+CGG | 0.496954 | 1.1:+80294148 | None:intergenic |
| TACTTACCGGTTCTGACGAC+AGG | 0.500661 | 1.1:+80297229 | None:intergenic |
| ATAATTTGGATAGCTTCAAA+AGG | 0.502077 | 1.1:+80296945 | None:intergenic |
| ATTATGAGTGCTTGAGCAGT+GGG | 0.503205 | 1.1:+80298675 | None:intergenic |
| CGTTGAGCACGATTTCATCA+TGG | 0.508016 | 1.1:-80292847 | MS.gene44409:CDS |
| GGGTGTGATGGCTGGAGCTA+AGG | 0.508105 | 1.1:-80298887 | None:intergenic |
| ATTGCAGGTTGCCGGTTCCC+AGG | 0.508516 | 1.1:-80296771 | MS.gene44409:intron |
| ATGAGCAGCTGGCTAGTGTA+AGG | 0.509201 | 1.1:-80298728 | MS.gene44409:CDS |
| GACGACCTTCATTCGTATGC+TGG | 0.512536 | 1.1:-80294009 | MS.gene44409:intron |
| CAGAAAGATTCTGAACCTCT+TGG | 0.512923 | 1.1:+80293704 | None:intergenic |
| TGACACTTACAGATAAGAAA+AGG | 0.514344 | 1.1:+80292730 | None:intergenic |
| TTCAGGTTTGCTCTTGCCCA+AGG | 0.514820 | 1.1:+80298699 | None:intergenic |
| TGCTGTTTATATGGCAAACC+TGG | 0.517732 | 1.1:-80295318 | MS.gene44409:CDS |
| AAAAGCTGTGCAAGGGAATG+TGG | 0.518297 | 1.1:-80295764 | MS.gene44409:CDS |
| ACCAAACCAAGCACTTGCCC+CGG | 0.520624 | 1.1:+80296748 | None:intergenic |
| TGTGCAAGGGAATGTGGGGC+AGG | 0.520706 | 1.1:-80295758 | MS.gene44409:CDS |
| AGTGTCAGGTTTCAACAAAC+CGG | 0.521126 | 1.1:+80293909 | None:intergenic |
| CATCACATCTGATATAAACT+GGG | 0.522285 | 1.1:+80293756 | None:intergenic |
| TATGGCAAACCTGGTGCATA+TGG | 0.523361 | 1.1:-80295309 | MS.gene44409:CDS |
| GGAAAATTGAAGCCCAACTT+GGG | 0.525005 | 1.1:-80296679 | MS.gene44409:CDS |
| TGAGCAATGACCGAACAACT+TGG | 0.525619 | 1.1:+80295527 | None:intergenic |
| TCTATCAGATAGATGTCTGC+AGG | 0.531946 | 1.1:+80292963 | None:intergenic |
| GACAGAGAGCAAAAGAATGC+TGG | 0.532220 | 1.1:-80292500 | MS.gene44409:CDS |
| GAATACCAGCATACGAATGA+AGG | 0.534723 | 1.1:+80294004 | None:intergenic |
| TGTCCACAATCATTGCTGAC+TGG | 0.536125 | 1.1:-80292759 | MS.gene44409:CDS |
| GCTCCAAAGGTTTGCCATTG+CGG | 0.537822 | 1.1:-80295632 | MS.gene44409:CDS |
| CAAGTTATAGATCGTAATGT+TGG | 0.541369 | 1.1:-80295673 | MS.gene44409:CDS |
| ATTGTGATGCTGGGTGAGAA+TGG | 0.542652 | 1.1:-80294041 | MS.gene44409:CDS |
| CTTCCTTTCTCAGTCAGAGA+AGG | 0.543896 | 1.1:-80295276 | MS.gene44409:CDS |
| TTGCTGCAAAAGTCATCAAG+AGG | 0.552612 | 1.1:-80292902 | MS.gene44409:CDS |
| GCTTCCTCGGCAGTTTCCTG+TGG | 0.555626 | 1.1:+80294161 | None:intergenic |
| GTTATGCCTTTGTCTTGGAA+AGG | 0.557319 | 1.1:-80293659 | MS.gene44409:intron |
| AGGAGTGGTTACAGTTGGAA+TGG | 0.561931 | 1.1:+80298837 | None:intergenic |
| AAAGCTGTGCAAGGGAATGT+GGG | 0.562644 | 1.1:-80295763 | MS.gene44409:CDS |
| GTCCACAATCATTGCTGACT+GGG | 0.565913 | 1.1:-80292758 | MS.gene44409:CDS |
| ATGAGAGAGACATGAAGGAA+AGG | 0.568976 | 1.1:-80295720 | MS.gene44409:CDS |
| CCAAATTATCAACTTGCCGA+AGG | 0.569243 | 1.1:-80296931 | MS.gene44409:CDS |
| TATAGGAAGATTATGTGTTG+AGG | 0.569885 | 1.1:-80297135 | MS.gene44409:intron |
| TTGTATGATACGTTGAACTC+AGG | 0.573498 | 1.1:+80293859 | None:intergenic |
| TTGTGATGCTGGGTGAGAAT+GGG | 0.580939 | 1.1:-80294040 | MS.gene44409:CDS |
| ATCCCAGTCAGCAATGATTG+TGG | 0.583341 | 1.1:+80292756 | None:intergenic |
| TTGGATGGCAACAACCGCAA+TGG | 0.587256 | 1.1:+80295618 | None:intergenic |
| AATTATGAGTGCTTGAGCAG+TGG | 0.589258 | 1.1:+80298674 | None:intergenic |
| TTACTTCACTCGCATTCTAG+AGG | 0.589481 | 1.1:-80296499 | MS.gene44409:CDS |
| GAGCAATGACCGAACAACTT+GGG | 0.591716 | 1.1:+80295528 | None:intergenic |
| AAAGATACCACTCATAGATA+CGG | 0.592191 | 1.1:-80296900 | MS.gene44409:CDS |
| TCACAGATTATTGTGATGCT+GGG | 0.595178 | 1.1:-80294050 | MS.gene44409:CDS |
| ACCCAACTAATTTCCGCCCA+AGG | 0.596535 | 1.1:-80292547 | MS.gene44409:CDS |
| GGTTACAGTTGGAATGGCAG+TGG | 0.597023 | 1.1:+80298843 | None:intergenic |
| ATGCTGGGTGAGAATGGGAC+AGG | 0.597656 | 1.1:-80294035 | MS.gene44409:CDS |
| AAAATACCTTTCCAAGACAA+AGG | 0.600861 | 1.1:+80293653 | None:intergenic |
| TTGACCACAAAAGCTGTGCA+AGG | 0.602035 | 1.1:-80295772 | MS.gene44409:CDS |
| GAGGTTCAGAATCTTTCTGG+TGG | 0.606749 | 1.1:-80293700 | MS.gene44409:CDS |
| ATCAACTGTTCAATAAGTAG+TGG | 0.606997 | 1.1:+80293730 | None:intergenic |
| CAAGTTTGTTGATCCTTGGG+CGG | 0.607651 | 1.1:+80292534 | None:intergenic |
| CTAGGTTGCAGAGACTCCAC+AGG | 0.612709 | 1.1:-80294177 | MS.gene44409:intron |
| GCATCTGTCGTTGCTAACGA+TGG | 0.618479 | 1.1:+80297291 | None:intergenic |
| TAATGTTGGTGATCTTTCAG+GGG | 0.618828 | 1.1:-80295659 | MS.gene44409:CDS |
| GAAGATTGCTTACATATCTG+AGG | 0.618924 | 1.1:-80297099 | MS.gene44409:CDS |
| TGAACAGTTGATGGACCAAG+AGG | 0.621724 | 1.1:-80293719 | MS.gene44409:CDS |
| TCGGAATCAAGATATGCACT+TGG | 0.628638 | 1.1:+80292936 | None:intergenic |
| GATAGAGTTATTGTTTACGA+GGG | 0.628816 | 1.1:-80292810 | MS.gene44409:CDS |
| AAACCTGACACTATAGAAGG+TGG | 0.635558 | 1.1:-80293898 | MS.gene44409:CDS |
| AAAATTTCCTGCCAATCAGG+CGG | 0.635955 | 1.1:+80296552 | None:intergenic |
| CAACAAACTTGAATCAACAA+AGG | 0.636970 | 1.1:-80292522 | MS.gene44409:CDS |
| TGATAGAGTTATTGTTTACG+AGG | 0.637216 | 1.1:-80292811 | MS.gene44409:CDS |
| AGAAAATCTTAGGTTTCGGG+AGG | 0.637470 | 1.1:-80295220 | MS.gene44409:CDS |
| TGACCACAAAAGCTGTGCAA+GGG | 0.646018 | 1.1:-80295771 | MS.gene44409:CDS |
| AAGCTGTGCAAGGGAATGTG+GGG | 0.647412 | 1.1:-80295762 | MS.gene44409:CDS |
| ATCACATCTGATATAAACTG+GGG | 0.648487 | 1.1:+80293757 | None:intergenic |
| CGTCGCAGTTGTCAACATGT+CGG | 0.652133 | 1.1:-80297332 | MS.gene44409:intron |
| GTTACAACACCATATGCACC+AGG | 0.652585 | 1.1:+80295300 | None:intergenic |
| TTCACATCCAGATAACTGGA+AGG | 0.653511 | 1.1:+80295568 | None:intergenic |
| GAGGAATTGTGTATTGGATG+CGG | 0.654426 | 1.1:-80297080 | MS.gene44409:CDS |
| CCAACCATGACCAAAACTCA+AGG | 0.657607 | 1.1:-80294113 | MS.gene44409:CDS |
| AATGTTGGTGATCTTTCAGG+GGG | 0.657975 | 1.1:-80295658 | MS.gene44409:CDS |
| GACTCCACAGGAAACTGCCG+AGG | 0.659331 | 1.1:-80294165 | MS.gene44409:CDS |
| ATTAGGACCGTATCTATGAG+TGG | 0.664710 | 1.1:+80296893 | None:intergenic |
| TGAGCAGCTGGCTAGTGTAA+GGG | 0.672567 | 1.1:-80298727 | MS.gene44409:CDS |
| GTTATCTGGATGTGAAACAG+AGG | 0.693943 | 1.1:-80295561 | MS.gene44409:CDS |
| TCACATCTGATATAAACTGG+GGG | 0.704498 | 1.1:+80293758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTAATTTAATTAT+AGG | - | chr1.1:80294203-80294222 | MS.gene44409:intron | 0.0% |
| !! | AAAAAAAAAAAAAAATCTCA+AGG | + | chr1.1:80297737-80297756 | None:intergenic | 10.0% |
| !! | AAAAAGAAATATTTACAATT+TGG | + | chr1.1:80293384-80293403 | None:intergenic | 10.0% |
| !! | AAAAGAAATATTTACAATTT+GGG | + | chr1.1:80293383-80293402 | None:intergenic | 10.0% |
| !! | TATTCTAATAAATTAGATAT+TGG | - | chr1.1:80297068-80297087 | MS.gene44409:CDS | 10.0% |
| !! | TTAAAAAAATAAAACAATAG+GGG | + | chr1.1:80293165-80293184 | None:intergenic | 10.0% |
| !!! | AGATTTTTTTTTTTTTTTGA+GGG | - | chr1.1:80297739-80297758 | MS.gene44409:intron | 10.0% |
| !!! | ATTAGAATATTTTTATTTCA+AGG | + | chr1.1:80297057-80297076 | None:intergenic | 10.0% |
| !! | AAAATGAAATCTGAAAAAAA+GGG | + | chr1.1:80294161-80294180 | None:intergenic | 15.0% |
| !! | AAATAAAAATAGATATGGTT+CGG | - | chr1.1:80296574-80296593 | MS.gene44409:intron | 15.0% |
| !! | AAATCATATATAAATAGTGA+TGG | + | chr1.1:80295240-80295259 | None:intergenic | 15.0% |
| !! | AATGTCTTAAATTAAATCTT+TGG | + | chr1.1:80295212-80295231 | None:intergenic | 15.0% |
| !! | ATGTACTTATAATTAAAGAA+TGG | - | chr1.1:80292776-80292795 | MS.gene44409:CDS | 15.0% |
| !! | ATGTCTTAAATTAAATCTTT+GGG | + | chr1.1:80295211-80295230 | None:intergenic | 15.0% |
| !! | CTTTCTGTTTAAAAAATTTA+GGG | - | chr1.1:80298673-80298692 | MS.gene44409:CDS | 15.0% |
| !! | GAAATAAAATGTATACATTT+AGG | + | chr1.1:80298165-80298184 | None:intergenic | 15.0% |
| !! | TAACCAAATAAAAATAGATA+TGG | - | chr1.1:80296569-80296588 | MS.gene44409:intron | 15.0% |
| !! | TCTTTCTGTTTAAAAAATTT+AGG | - | chr1.1:80298672-80298691 | MS.gene44409:CDS | 15.0% |
| !! | TTCTTATATTCTATATTAGA+AGG | + | chr1.1:80294964-80294983 | None:intergenic | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | - | chr1.1:80296365-80296384 | MS.gene44409:intron | 15.0% |
| !!! | ATTTTTTTTTTTTTTTGAGG+GGG | - | chr1.1:80297741-80297760 | MS.gene44409:intron | 15.0% |
| !!! | CAAAAGTATATTTCTTATAA+TGG | + | chr1.1:80292580-80292599 | None:intergenic | 15.0% |
| !!! | GAGATTTTTTTTTTTTTTTG+AGG | - | chr1.1:80297738-80297757 | MS.gene44409:intron | 15.0% |
| !!! | GATTTTTTTTTTTTTTTGAG+GGG | - | chr1.1:80297740-80297759 | MS.gene44409:intron | 15.0% |
| !! | AAAGAATGAACATAAAATGA+AGG | + | chr1.1:80297029-80297048 | None:intergenic | 20.0% |
| !! | AAATATAAATGCAATTTGAG+TGG | - | chr1.1:80296210-80296229 | MS.gene44409:intron | 20.0% |
| !! | AAGAAAATTAAATAGATGGA+AGG | + | chr1.1:80292541-80292560 | None:intergenic | 20.0% |
| !! | AATATAAATGCAATTTGAGT+GGG | - | chr1.1:80296211-80296230 | MS.gene44409:intron | 20.0% |
| !! | AATCAAAACTAAAGTGATTA+TGG | + | chr1.1:80296832-80296851 | None:intergenic | 20.0% |
| !! | ACAAGTTAATGAATCAAATA+TGG | + | chr1.1:80293335-80293354 | None:intergenic | 20.0% |
| !! | ACAATACAAATTTCAAAAAC+AGG | + | chr1.1:80295405-80295424 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAATTAAATAGA+TGG | + | chr1.1:80292545-80292564 | None:intergenic | 20.0% |
| !! | ATATCTTTGAGTGTTAATAA+TGG | - | chr1.1:80294354-80294373 | MS.gene44409:intron | 20.0% |
| !! | ATCAAAACTAAAGTGATTAT+GGG | + | chr1.1:80296831-80296850 | None:intergenic | 20.0% |
| !! | ATTAATGAATCATGAATGTA+AGG | - | chr1.1:80296923-80296942 | MS.gene44409:CDS | 20.0% |
| !! | ATTCATATAATATGATTGAC+GGG | + | chr1.1:80292838-80292857 | None:intergenic | 20.0% |
| !! | ATTCATATTTAACTCAATAG+GGG | + | chr1.1:80293101-80293120 | None:intergenic | 20.0% |
| !! | ATTGAAATAAACATGATTAG+AGG | + | chr1.1:80295477-80295496 | None:intergenic | 20.0% |
| !! | CATTCATATAATATGATTGA+CGG | + | chr1.1:80292839-80292858 | None:intergenic | 20.0% |
| !! | CATTCATATTTAACTCAATA+GGG | + | chr1.1:80293102-80293121 | None:intergenic | 20.0% |
| !! | CTTGCACTTTATAAAAAAAT+TGG | + | chr1.1:80293500-80293519 | None:intergenic | 20.0% |
| !! | GAAAATGAAATCTGAAAAAA+AGG | + | chr1.1:80294162-80294181 | None:intergenic | 20.0% |
| !! | GACAATGCATAATATATATA+AGG | + | chr1.1:80293667-80293686 | None:intergenic | 20.0% |
| !! | GTAATTGTAATTATAATTGC+AGG | - | chr1.1:80294569-80294588 | MS.gene44409:intron | 20.0% |
| !! | TAATGAATCAAATATGGAAA+TGG | + | chr1.1:80293329-80293348 | None:intergenic | 20.0% |
| !! | TATCTTTGAGTGTTAATAAT+GGG | - | chr1.1:80294355-80294374 | MS.gene44409:intron | 20.0% |
| !! | TATTTCAATATACGTAATAC+AGG | - | chr1.1:80295539-80295558 | MS.gene44409:CDS | 20.0% |
| !! | TTCAATATACGTTATAATAC+AGG | - | chr1.1:80295491-80295510 | MS.gene44409:intron | 20.0% |
| !!! | AACTAAAAAAAGGCTAATTT+TGG | + | chr1.1:80294719-80294738 | None:intergenic | 20.0% |
| !!! | AGTATATTTCTTATAATGGA+TGG | + | chr1.1:80292576-80292595 | None:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | - | chr1.1:80296366-80296385 | MS.gene44409:intron | 20.0% |
| !!! | CAATTTTTTTATAAAGTGCA+AGG | - | chr1.1:80293498-80293517 | MS.gene44409:intron | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | - | chr1.1:80296360-80296379 | MS.gene44409:intron | 20.0% |
| !!! | GAACCATATCTATTTTTATT+TGG | + | chr1.1:80296575-80296594 | None:intergenic | 20.0% |
| !!! | GCATATTTGAAAATTTTACA+GGG | - | chr1.1:80292978-80292997 | MS.gene44409:intron | 20.0% |
| !!! | TCTATCTCTTAATTTTTTCA+TGG | - | chr1.1:80292914-80292933 | MS.gene44409:CDS | 20.0% |
| !!! | TTTATTTTTTGAGCAATTCA+CGG | + | chr1.1:80293743-80293762 | None:intergenic | 20.0% |
| ! | AAAAAATACAATGGAGTACA+AGG | + | chr1.1:80293615-80293634 | None:intergenic | 25.0% |
| ! | AAGTAATACTCATCCAAAAT+AGG | - | chr1.1:80293027-80293046 | MS.gene44409:intron | 25.0% |
| ! | AATGTATTCAAGAATGTAGA+CGG | + | chr1.1:80297821-80297840 | None:intergenic | 25.0% |
| ! | AATTACAATCAGAAACTGAA+TGG | + | chr1.1:80293979-80293998 | None:intergenic | 25.0% |
| ! | ACATAGCTGAAAAAATAAAG+AGG | + | chr1.1:80295965-80295984 | None:intergenic | 25.0% |
| ! | AGGAAATTAAACAAACCTAT+TGG | + | chr1.1:80295857-80295876 | None:intergenic | 25.0% |
| ! | AGTTTCTGCTTTATATATTG+TGG | - | chr1.1:80295881-80295900 | MS.gene44409:intron | 25.0% |
| ! | ATAATTTGGATAGCTTCAAA+AGG | + | chr1.1:80294413-80294432 | None:intergenic | 25.0% |
| ! | ATATAAAGCAGAAACTAAAG+AGG | + | chr1.1:80295877-80295896 | None:intergenic | 25.0% |
| ! | ATATAAATGCAATTTGAGTG+GGG | - | chr1.1:80296212-80296231 | MS.gene44409:intron | 25.0% |
| ! | ATGATGTGTTTGTTTAAATG+GGG | + | chr1.1:80296696-80296715 | None:intergenic | 25.0% |
| ! | ATGGTGTTTGTGAATATATT+TGG | - | chr1.1:80296267-80296286 | MS.gene44409:intron | 25.0% |
| ! | ATTGCTAACGATATTGAATA+AGG | + | chr1.1:80294906-80294925 | None:intergenic | 25.0% |
| ! | CAAATATGGAAATGGTTTAT+TGG | + | chr1.1:80293321-80293340 | None:intergenic | 25.0% |
| ! | CACTACCAAAAAAAATACAA+TGG | + | chr1.1:80293624-80293643 | None:intergenic | 25.0% |
| ! | CATAATATATATAAGGTCTG+AGG | + | chr1.1:80293660-80293679 | None:intergenic | 25.0% |
| ! | GATGATGTGTTTGTTTAAAT+GGG | + | chr1.1:80296697-80296716 | None:intergenic | 25.0% |
| ! | GCATTCATATTTAACTCAAT+AGG | + | chr1.1:80293103-80293122 | None:intergenic | 25.0% |
| ! | GGAAATTAAACAAACCTATT+GGG | + | chr1.1:80295856-80295875 | None:intergenic | 25.0% |
| ! | TAAATATGAATGCTAACCAT+TGG | - | chr1.1:80293110-80293129 | MS.gene44409:intron | 25.0% |
| ! | TCAGTTTCTGATTGTAATTT+GGG | - | chr1.1:80293980-80293999 | MS.gene44409:intron | 25.0% |
| ! | TGCTATATTAAAACTACACA+TGG | + | chr1.1:80295144-80295163 | None:intergenic | 25.0% |
| ! | TTCACGGTATTATTATACAA+TGG | + | chr1.1:80293727-80293746 | None:intergenic | 25.0% |
| ! | TTCAGTTTCTGATTGTAATT+TGG | - | chr1.1:80293979-80293998 | MS.gene44409:intron | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | - | chr1.1:80296498-80296517 | MS.gene44409:CDS | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | + | chr1.1:80296487-80296506 | None:intergenic | 25.0% |
| !! | GGCATATTTGAAAATTTTAC+AGG | - | chr1.1:80292977-80292996 | MS.gene44409:intron | 25.0% |
| !! | TGATGATGTGTTTGTTTAAA+TGG | + | chr1.1:80296698-80296717 | None:intergenic | 25.0% |
| !! | TTGAATTTCAGAACCTATTT+TGG | + | chr1.1:80293043-80293062 | None:intergenic | 25.0% |
| !! | TTTAGGGTTTGATATTTAGA+CGG | + | chr1.1:80293830-80293849 | None:intergenic | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | + | chr1.1:80296486-80296505 | None:intergenic | 25.0% |
| !!! | AATTAGCCTTTTTTTAGTTG+TGG | - | chr1.1:80294720-80294739 | MS.gene44409:intron | 25.0% |
| !!! | CATTGTATTTTTTTTGGTAG+TGG | - | chr1.1:80293622-80293641 | MS.gene44409:intron | 25.0% |
| !!! | GACTTTATTTGCTGTTTATA+TGG | - | chr1.1:80296028-80296047 | MS.gene44409:intron | 25.0% |
| !!! | GTACTCCATTGTATTTTTTT+TGG | - | chr1.1:80293616-80293635 | MS.gene44409:intron | 25.0% |
| !!! | TAAACATGTGTTGATTTTCT+TGG | - | chr1.1:80298103-80298122 | MS.gene44409:intron | 25.0% |
| !!! | TAAGTGTCATTGTTTTTCAA+TGG | - | chr1.1:80298639-80298658 | MS.gene44409:intron | 25.0% |
| !!! | TTATTTTTCTTTCCATTTGC+AGG | - | chr1.1:80294778-80294797 | MS.gene44409:intron | 25.0% |
| !!! | TTCATTACGTTTTGAATAAG+TGG | + | chr1.1:80296979-80296998 | None:intergenic | 25.0% |
| !!! | TTTTTTTAACGGCTAACTAA+CGG | - | chr1.1:80293462-80293481 | MS.gene44409:intron | 25.0% |
| AAAAAATGAGAGAGACATGA+AGG | - | chr1.1:80295630-80295649 | MS.gene44409:CDS | 30.0% | |
| AAAAATTATGTTGTGCTCTC+TGG | - | chr1.1:80298716-80298735 | MS.gene44409:CDS | 30.0% | |
| AAAATACCTTTCCAAGACAA+AGG | + | chr1.1:80297705-80297724 | None:intergenic | 30.0% | |
| AAAGATACCACTCATAGATA+CGG | - | chr1.1:80294455-80294474 | MS.gene44409:intron | 30.0% | |
| AAATTTGACGTATTACGTAC+AGG | + | chr1.1:80296350-80296369 | None:intergenic | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | - | chr1.1:80296132-80296151 | MS.gene44409:intron | 30.0% | |
| AATGAATCATGAATGTAAGG+CGG | - | chr1.1:80296926-80296945 | MS.gene44409:CDS | 30.0% | |
| AATGGAATCGAATTGAATTG+AGG | + | chr1.1:80293956-80293975 | None:intergenic | 30.0% | |
| AATTAAATAGATGGAAGGAG+TGG | + | chr1.1:80292536-80292555 | None:intergenic | 30.0% | |
| ACTACTTATTGAACAGTTGA+TGG | - | chr1.1:80297627-80297646 | MS.gene44409:intron | 30.0% | |
| ATATCTGAGGAATTGTGTAT+TGG | - | chr1.1:80294269-80294288 | MS.gene44409:intron | 30.0% | |
| ATCAACTGTTCAATAAGTAG+TGG | + | chr1.1:80297628-80297647 | None:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | + | chr1.1:80297601-80297620 | None:intergenic | 30.0% | |
| ATGGAATCGAATTGAATTGA+GGG | + | chr1.1:80293955-80293974 | None:intergenic | 30.0% | |
| ATGTATTCAAGAATGTAGAC+GGG | + | chr1.1:80297820-80297839 | None:intergenic | 30.0% | |
| CAAAAAATAGTGTAACTGCA+GGG | - | chr1.1:80293558-80293577 | MS.gene44409:intron | 30.0% | |
| CAACAAACTTGAATCAACAA+AGG | - | chr1.1:80298833-80298852 | MS.gene44409:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | - | chr1.1:80296131-80296150 | MS.gene44409:intron | 30.0% | |
| CAAGTGTCTAACAGATAATT+GGG | + | chr1.1:80297545-80297564 | None:intergenic | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | - | chr1.1:80295682-80295701 | MS.gene44409:CDS | 30.0% | |
| CAGAGTGATTTACTTTAGAT+TGG | - | chr1.1:80297877-80297896 | MS.gene44409:intron | 30.0% | |
| CATCACATCTGATATAAACT+GGG | + | chr1.1:80297602-80297621 | None:intergenic | 30.0% | |
| CATCCTTAAAATGGTGAAAA+CGG | - | chr1.1:80292889-80292908 | MS.gene44409:CDS | 30.0% | |
| GATAGAGTTATTGTTTACGA+GGG | - | chr1.1:80298545-80298564 | MS.gene44409:intron | 30.0% | |
| GGAATTAATATCTTCTTGTC+CGG | - | chr1.1:80296100-80296119 | MS.gene44409:intron | 30.0% | |
| GTCTATCCACAACTAAAAAA+AGG | + | chr1.1:80294729-80294748 | None:intergenic | 30.0% | |
| TAAAAGCTTAGATGATGTTC+AGG | - | chr1.1:80296867-80296886 | MS.gene44409:intron | 30.0% | |
| TAACAGATAATTGGGACTTT+GGG | + | chr1.1:80297537-80297556 | None:intergenic | 30.0% | |
| TAATGTTAGACTGTTGTGTT+GGG | + | chr1.1:80295334-80295353 | None:intergenic | 30.0% | |
| TAATTATAATTGCAGGTTGC+CGG | - | chr1.1:80294576-80294595 | MS.gene44409:intron | 30.0% | |
| TATAGGAAGATTATGTGTTG+AGG | - | chr1.1:80294220-80294239 | MS.gene44409:intron | 30.0% | |
| TATCTCCTACATCTCATTTA+CGG | - | chr1.1:80296187-80296206 | MS.gene44409:intron | 30.0% | |
| TATTTCCGTAAATGAGATGT+AGG | + | chr1.1:80296195-80296214 | None:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | + | chr1.1:80297603-80297622 | None:intergenic | 30.0% | |
| TCTGAATATCTATGATGCAT+AGG | - | chr1.1:80296292-80296311 | MS.gene44409:intron | 30.0% | |
| TGACACTTACAGATAAGAAA+AGG | + | chr1.1:80298628-80298647 | None:intergenic | 30.0% | |
| TGATAGAGTTATTGTTTACG+AGG | - | chr1.1:80298544-80298563 | MS.gene44409:intron | 30.0% | |
| TGATGTGTTTGTTTAAATGG+GGG | + | chr1.1:80296695-80296714 | None:intergenic | 30.0% | |
| TTAATGTTAGACTGTTGTGT+TGG | + | chr1.1:80295335-80295354 | None:intergenic | 30.0% | |
| TTGCTATAGTAGAACAGTAA+TGG | + | chr1.1:80298215-80298234 | None:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | - | chr1.1:80296125-80296144 | MS.gene44409:intron | 30.0% | |
| ! | AAACCGTTTTCACCATTTTA+AGG | + | chr1.1:80292895-80292914 | None:intergenic | 30.0% |
| ! | ACATGTATATCTCAGCATTT+TGG | + | chr1.1:80295759-80295778 | None:intergenic | 30.0% |
| ! | ACCAAATAAAAAAAAGCGCA+AGG | - | chr1.1:80293527-80293546 | MS.gene44409:intron | 30.0% |
| ! | ATATACTTTTGACATGTAGC+TGG | - | chr1.1:80292589-80292608 | MS.gene44409:intron | 30.0% |
| ! | ATTAGGGTTGTTCTTTTTAG+AGG | + | chr1.1:80293865-80293884 | None:intergenic | 30.0% |
| ! | CAAGCACTCATAATTTTTAC+AGG | - | chr1.1:80292689-80292708 | MS.gene44409:intron | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | - | chr1.1:80294480-80294499 | MS.gene44409:intron | 30.0% |
| ! | CTGATTGTAATTTGGGATTT+AGG | - | chr1.1:80293987-80294006 | MS.gene44409:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | + | chr1.1:80296488-80296507 | None:intergenic | 30.0% |
| ! | TTAGGGTTGTTCTTTTTAGA+GGG | + | chr1.1:80293864-80293883 | None:intergenic | 30.0% |
| !! | ATATATTCAGCTTTGAAGCA+TGG | + | chr1.1:80296660-80296679 | None:intergenic | 30.0% |
| !! | ATTCAAGTTTGTTGATCCTT+GGG | + | chr1.1:80298827-80298846 | None:intergenic | 30.0% |
| !! | ATTGTTTGAAAGCGTTATGT+TGG | - | chr1.1:80294983-80295002 | MS.gene44409:intron | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | + | chr1.1:80294482-80294501 | None:intergenic | 30.0% |
| !! | GTTTTCACCATTTTAAGGAT+GGG | + | chr1.1:80292890-80292909 | None:intergenic | 30.0% |
| !! | TATATTCAGCTTTGAAGCAT+GGG | + | chr1.1:80296659-80296678 | None:intergenic | 30.0% |
| !!! | ACCTTTTACTTTTAAAGCGA+AGG | + | chr1.1:80295174-80295193 | None:intergenic | 30.0% |
| !!! | AGAATGGATTGCATTTTCAT+AGG | - | chr1.1:80292792-80292811 | MS.gene44409:CDS | 30.0% |
| !!! | CTGCAGTTACACTATTTTTT+GGG | + | chr1.1:80293559-80293578 | None:intergenic | 30.0% |
| !!! | GAATGGATTGCATTTTCATA+GGG | - | chr1.1:80292793-80292812 | MS.gene44409:CDS | 30.0% |
| !!! | GAGTACAAGGTTTTTTTTCT+TGG | + | chr1.1:80293602-80293621 | None:intergenic | 30.0% |
| !!! | GTTACACTATTTTTTGGGTT+TGG | + | chr1.1:80293554-80293573 | None:intergenic | 30.0% |
| !!! | TCATGTCTCTCTCATTTTTT+TGG | + | chr1.1:80295630-80295649 | None:intergenic | 30.0% |
| !!! | TCCTTGCGCTTTTTTTTATT+TGG | + | chr1.1:80293531-80293550 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTCTTGGAAACT+TGG | - | chr1.1:80298111-80298130 | MS.gene44409:intron | 30.0% |
| !!! | TTTTTTTTGCCTTTTCCTTC+TGG | - | chr1.1:80295451-80295470 | MS.gene44409:intron | 30.0% |
| AAAATTAACTGAGTGCCACA+TGG | + | chr1.1:80293438-80293457 | None:intergenic | 35.0% | |
| AAACACACAACAAAGCTAAG+TGG | + | chr1.1:80298289-80298308 | None:intergenic | 35.0% | |
| AACTCAATTGATCAGTGTTG+TGG | + | chr1.1:80292736-80292755 | None:intergenic | 35.0% | |
| AGCAAAACCCATCCTTAAAA+TGG | - | chr1.1:80292880-80292899 | MS.gene44409:CDS | 35.0% | |
| ATATATGTTTGATGAGCAGC+TGG | - | chr1.1:80292616-80292635 | MS.gene44409:intron | 35.0% | |
| ATATCACTGTGAACTGTCAT+TGG | - | chr1.1:80295904-80295923 | MS.gene44409:intron | 35.0% | |
| ATGAATCATGAATGTAAGGC+GGG | - | chr1.1:80296927-80296946 | MS.gene44409:CDS | 35.0% | |
| CAACACTGAGATTGATTGAA+TGG | - | chr1.1:80296248-80296267 | MS.gene44409:intron | 35.0% | |
| CAATCAGAAACTGAATGGAA+TGG | + | chr1.1:80293974-80293993 | None:intergenic | 35.0% | |
| CAATTCAGATCCTCGAAAAT+GGG | + | chr1.1:80294831-80294850 | None:intergenic | 35.0% | |
| CATCACAAATAGATGTCTAC+AGG | + | chr1.1:80298238-80298257 | None:intergenic | 35.0% | |
| CCAAAAAATAGTGTAACTGC+AGG | - | chr1.1:80293557-80293576 | MS.gene44409:intron | 35.0% | |
| CTAACAGATAATTGGGACTT+TGG | + | chr1.1:80297538-80297557 | None:intergenic | 35.0% | |
| GAAGATTGCTTACATATCTG+AGG | - | chr1.1:80294256-80294275 | MS.gene44409:intron | 35.0% | |
| GCAAGTGTCTAACAGATAAT+TGG | + | chr1.1:80297546-80297565 | None:intergenic | 35.0% | |
| GCAATCCGAATTACATAATC+CGG | - | chr1.1:80292944-80292963 | MS.gene44409:CDS | 35.0% | |
| GCTACGTTTAATTCTAGTGA+AGG | + | chr1.1:80295280-80295299 | None:intergenic | 35.0% | |
| GTATCTTTGTCCAAATCCTT+CGG | + | chr1.1:80294443-80294462 | None:intergenic | 35.0% | |
| TATCTATGATGCATAGGTAC+CGG | - | chr1.1:80296298-80296317 | MS.gene44409:intron | 35.0% | |
| TCACAGATTATTGTGATGCT+GGG | - | chr1.1:80297305-80297324 | MS.gene44409:CDS | 35.0% | |
| TCACATCTGATATAAACTGG+GGG | + | chr1.1:80297600-80297619 | None:intergenic | 35.0% | |
| TCCAACACATTCATTGTGTT+GGG | - | chr1.1:80295076-80295095 | MS.gene44409:intron | 35.0% | |
| TTCACAGATTATTGTGATGC+TGG | - | chr1.1:80297304-80297323 | MS.gene44409:CDS | 35.0% | |
| TTGAAACCTGACACTATAGA+AGG | - | chr1.1:80297454-80297473 | MS.gene44409:intron | 35.0% | |
| TTGTATGATACGTTGAACTC+AGG | + | chr1.1:80297499-80297518 | None:intergenic | 35.0% | |
| TTGTGGATAGACATGATTTG+AGG | - | chr1.1:80294737-80294756 | MS.gene44409:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr1.1:80293218-80293237 | None:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | + | chr1.1:80298575-80298594 | None:intergenic | 35.0% | |
| ! | AACTCAATAGGGGTTTTCTT+TGG | + | chr1.1:80293091-80293110 | None:intergenic | 35.0% |
| ! | ACATTCTTGACGACACTTTT+TGG | + | chr1.1:80294094-80294113 | None:intergenic | 35.0% |
| ! | ACTCAATAGGGGTTTTCTTT+GGG | + | chr1.1:80293090-80293109 | None:intergenic | 35.0% |
| ! | ACTGCTGTTTATTTCCTCTA+TGG | - | chr1.1:80297975-80297994 | MS.gene44409:intron | 35.0% |
| ! | ATTTTCTGTTGGAACAAAGC+CGG | + | chr1.1:80296122-80296141 | None:intergenic | 35.0% |
| ! | CATTCTAGAGGATGATTTGA+AGG | - | chr1.1:80294868-80294887 | MS.gene44409:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | + | chr1.1:80296133-80296152 | None:intergenic | 35.0% |
| ! | GTATATCTCAGCATTTTGGA+TGG | + | chr1.1:80295755-80295774 | None:intergenic | 35.0% |
| ! | TTCACCTTCTCCTTTTATTC+AGG | - | chr1.1:80297423-80297442 | MS.gene44409:intron | 35.0% |
| !! | ATTCATTAACTTGTGCCTTG+AGG | - | chr1.1:80293341-80293360 | MS.gene44409:intron | 35.0% |
| !! | CATTCTTGACGACACTTTTT+GGG | + | chr1.1:80294093-80294112 | None:intergenic | 35.0% |
| !! | CGTTTTCACCATTTTAAGGA+TGG | + | chr1.1:80292891-80292910 | None:intergenic | 35.0% |
| !! | GAAATTTTGACCCATTTTCG+AGG | - | chr1.1:80294818-80294837 | MS.gene44409:intron | 35.0% |
| !! | GATTCAAGTTTGTTGATCCT+TGG | + | chr1.1:80298828-80298847 | None:intergenic | 35.0% |
| !! | GCCTTCGCTTTAAAAGTAAA+AGG | - | chr1.1:80295170-80295189 | MS.gene44409:intron | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | - | chr1.1:80295695-80295714 | MS.gene44409:CDS | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | - | chr1.1:80295696-80295715 | MS.gene44409:CDS | 35.0% |
| !! | TTCATTAACTTGTGCCTTGA+GGG | - | chr1.1:80293342-80293361 | MS.gene44409:intron | 35.0% |
| !! | TTCTTTTTAGAGGGATGGAA+AGG | + | chr1.1:80293855-80293874 | None:intergenic | 35.0% |
| !!! | AACTGTCATTGGTTTTTGTC+GGG | - | chr1.1:80295915-80295934 | MS.gene44409:intron | 35.0% |
| !!! | CCTGCAGTTACACTATTTTT+TGG | + | chr1.1:80293560-80293579 | None:intergenic | 35.0% |
| !!! | GAACTGTCATTGGTTTTTGT+CGG | - | chr1.1:80295914-80295933 | MS.gene44409:intron | 35.0% |
| !!! | GTATTTTTTTTGGTAGTGGC+CGG | - | chr1.1:80293626-80293645 | MS.gene44409:intron | 35.0% |
| AAAATTTCCTGCCAATCAGG+CGG | + | chr1.1:80294806-80294825 | None:intergenic | 40.0% | |
| AAACATGATTAGAGGCCAGA+AGG | + | chr1.1:80295469-80295488 | None:intergenic | 40.0% | |
| AAACCTGACACTATAGAAGG+TGG | - | chr1.1:80297457-80297476 | MS.gene44409:intron | 40.0% | |
| AAATATGCCCATTTGCAGTC+CGG | + | chr1.1:80292966-80292985 | None:intergenic | 40.0% | |
| AACAAACCGGCCTGAATAAA+AGG | + | chr1.1:80297436-80297455 | None:intergenic | 40.0% | |
| AAGGTGCACAAGTAATCTCA+AGG | + | chr1.1:80297768-80297787 | None:intergenic | 40.0% | |
| AATAGAGAATGGGTCGTTTG+AGG | + | chr1.1:80293906-80293925 | None:intergenic | 40.0% | |
| AATGGGTCGTTTGAGGAAAT+GGG | + | chr1.1:80293899-80293918 | None:intergenic | 40.0% | |
| AATTATGAGTGCTTGAGCAG+TGG | + | chr1.1:80292684-80292703 | None:intergenic | 40.0% | |
| AATTATGTTGTGCTCTCTGG+TGG | - | chr1.1:80298719-80298738 | MS.gene44409:CDS | 40.0% | |
| ACATAATCCGGACTGCAAAT+GGG | - | chr1.1:80292956-80292975 | MS.gene44409:CDS | 40.0% | |
| ACCCAACACAATGAATGTGT+TGG | + | chr1.1:80295080-80295099 | None:intergenic | 40.0% | |
| ACTACACATGGCATATCTCT+AGG | + | chr1.1:80295132-80295151 | None:intergenic | 40.0% | |
| AGAAAATCTTAGGTTTCGGG+AGG | - | chr1.1:80296135-80296154 | MS.gene44409:intron | 40.0% | |
| AGAGGGATGGAAAGGAATTT+AGG | + | chr1.1:80293847-80293866 | None:intergenic | 40.0% | |
| AGCATAAGTTTGAGCTTCCT+CGG | + | chr1.1:80297210-80297229 | None:intergenic | 40.0% | |
| AGTGTCAGGTTTCAACAAAC+CGG | + | chr1.1:80297449-80297468 | None:intergenic | 40.0% | |
| ATCTCAAGTCTCAACCATAG+AGG | + | chr1.1:80297992-80298011 | None:intergenic | 40.0% | |
| ATGAGAGAGACATGAAGGAA+AGG | - | chr1.1:80295635-80295654 | MS.gene44409:CDS | 40.0% | |
| ATTAGGACCGTATCTATGAG+TGG | + | chr1.1:80294465-80294484 | None:intergenic | 40.0% | |
| ATTATGAGTGCTTGAGCAGT+GGG | + | chr1.1:80292683-80292702 | None:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | + | chr1.1:80296085-80296104 | None:intergenic | 40.0% | |
| CAAACGACCCATTCTCTATT+CGG | - | chr1.1:80293906-80293925 | MS.gene44409:CDS | 40.0% | |
| CAACACAATGAATGTGTTGG+AGG | + | chr1.1:80295077-80295096 | None:intergenic | 40.0% | |
| CAAGAGGTTCAGAATCTTTC+TGG | - | chr1.1:80297652-80297671 | MS.gene44409:intron | 40.0% | |
| CAGAAAGATTCTGAACCTCT+TGG | + | chr1.1:80297654-80297673 | None:intergenic | 40.0% | |
| CCAAAACTCAAGGCAATTTC+AGG | - | chr1.1:80297252-80297271 | MS.gene44409:CDS | 40.0% | |
| CCAAATTATCAACTTGCCGA+AGG | - | chr1.1:80294424-80294443 | MS.gene44409:intron | 40.0% | |
| CCTAGATACAACATCAGAGA+AGG | + | chr1.1:80297163-80297182 | None:intergenic | 40.0% | |
| CCTTCTCTGATGTTGTATCT+AGG | - | chr1.1:80297160-80297179 | MS.gene44409:intron | 40.0% | |
| CTCCAACACATTCATTGTGT+TGG | - | chr1.1:80295075-80295094 | MS.gene44409:intron | 40.0% | |
| CTGAAAGAGCTAAATTACGC+TGG | + | chr1.1:80297860-80297879 | None:intergenic | 40.0% | |
| CTGTTTCACATCCAGATAAC+TGG | + | chr1.1:80295794-80295813 | None:intergenic | 40.0% | |
| GAAATCGTGCTCAACGATAA+AGG | + | chr1.1:80298504-80298523 | None:intergenic | 40.0% | |
| GAATACCAGCATACGAATGA+AGG | + | chr1.1:80297354-80297373 | None:intergenic | 40.0% | |
| GAGGAATTGTGTATTGGATG+CGG | - | chr1.1:80294275-80294294 | MS.gene44409:intron | 40.0% | |
| GAGGGATGGAAAGGAATTTA+GGG | + | chr1.1:80293846-80293865 | None:intergenic | 40.0% | |
| GCAATTCAGATCCTCGAAAA+TGG | + | chr1.1:80294832-80294851 | None:intergenic | 40.0% | |
| GCAGTCCGGATTATGTAATT+CGG | + | chr1.1:80292952-80292971 | None:intergenic | 40.0% | |
| GGAAAATTGAAGCCCAACTT+GGG | - | chr1.1:80294676-80294695 | MS.gene44409:intron | 40.0% | |
| GGAGGTTTCTCTTACTTTCA+AGG | - | chr1.1:80296153-80296172 | MS.gene44409:intron | 40.0% | |
| GTCAAAATTTCCTGCCAATC+AGG | + | chr1.1:80294809-80294828 | None:intergenic | 40.0% | |
| GTTATCTGGATGTGAAACAG+AGG | - | chr1.1:80295794-80295813 | MS.gene44409:intron | 40.0% | |
| GTTATGCCTTTGTCTTGGAA+AGG | - | chr1.1:80297696-80297715 | MS.gene44409:intron | 40.0% | |
| GTTTCTTAACATGTGCCCTA+AGG | + | chr1.1:80293219-80293238 | None:intergenic | 40.0% | |
| TACATAATCCGGACTGCAAA+TGG | - | chr1.1:80292955-80292974 | MS.gene44409:CDS | 40.0% | |
| TAGACGGGAAAGAAAAGACA+GGG | + | chr1.1:80297805-80297824 | None:intergenic | 40.0% | |
| TAGAGAAGCCAAATCTGTGT+TGG | - | chr1.1:80298028-80298047 | MS.gene44409:intron | 40.0% | |
| TAGGGGTCATATTTCACCAA+TGG | + | chr1.1:80293148-80293167 | None:intergenic | 40.0% | |
| TATCAACTTGCCGAAGGATT+TGG | - | chr1.1:80294430-80294449 | MS.gene44409:intron | 40.0% | |
| TCATTGTGTTGGGTGTGAAA+GGG | - | chr1.1:80295086-80295105 | MS.gene44409:intron | 40.0% | |
| TCGGAATCAAGATATGCACT+TGG | + | chr1.1:80298422-80298441 | None:intergenic | 40.0% | |
| TCTATCAGATAGATGTCTGC+AGG | + | chr1.1:80298395-80298414 | None:intergenic | 40.0% | |
| TGATGAACCTTCCAGTTATC+TGG | - | chr1.1:80295780-80295799 | MS.gene44409:intron | 40.0% | |
| TGGAAAATTGAAGCCCAACT+TGG | - | chr1.1:80294675-80294694 | MS.gene44409:intron | 40.0% | |
| TGGTTGGGACAAATGGAATT+GGG | - | chr1.1:80294626-80294645 | MS.gene44409:intron | 40.0% | |
| TTACTTCACTCGCATTCTAG+AGG | - | chr1.1:80294856-80294875 | MS.gene44409:intron | 40.0% | |
| TTCACATCCAGATAACTGGA+AGG | + | chr1.1:80295790-80295809 | None:intergenic | 40.0% | |
| TTCAGGCTTCATGTAGTTGA+AGG | - | chr1.1:80297269-80297288 | MS.gene44409:CDS | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+AGG | - | chr1.1:80295085-80295104 | MS.gene44409:intron | 40.0% | |
| TTGCTGCAAAAGTCATCAAG+AGG | - | chr1.1:80298453-80298472 | MS.gene44409:intron | 40.0% | |
| TTGGTGAATGCTAGAACCAT+TGG | - | chr1.1:80293129-80293148 | MS.gene44409:intron | 40.0% | |
| TTGGTTGGGACAAATGGAAT+TGG | - | chr1.1:80294625-80294644 | MS.gene44409:intron | 40.0% | |
| TTTGAGGAAATGGGAGAGTT+GGG | + | chr1.1:80293890-80293909 | None:intergenic | 40.0% | |
| TTTGGTTATTGCGTCGTAGT+TGG | + | chr1.1:80296557-80296576 | None:intergenic | 40.0% | |
| ! | AAGGTCTGAGGTTCAAATTC+CGG | + | chr1.1:80293648-80293667 | None:intergenic | 40.0% |
| ! | AGATTTGGCTTCTCTAGTGT+GGG | + | chr1.1:80298024-80298043 | None:intergenic | 40.0% |
| ! | CCTGAAATTGCCTTGAGTTT+TGG | + | chr1.1:80297255-80297274 | None:intergenic | 40.0% |
| ! | CTTTTGTGGTCAACATACTG+AGG | + | chr1.1:80295576-80295595 | None:intergenic | 40.0% |
| ! | GACTTTGGGCTAATTTTCTG+AGG | + | chr1.1:80297523-80297542 | None:intergenic | 40.0% |
| ! | TGACGTTGAAGCAAGCTTTT+TGG | - | chr1.1:80298256-80298275 | MS.gene44409:intron | 40.0% |
| ! | TGCTGTTTATATGGCAAACC+TGG | - | chr1.1:80296037-80296056 | MS.gene44409:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr1.1:80293359-80293378 | None:intergenic | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | - | chr1.1:80295697-80295716 | MS.gene44409:CDS | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr1.1:80293201-80293220 | MS.gene44409:intron | 40.0% |
| !! | ATGGTTCTAGCATTCACCAA+TGG | + | chr1.1:80293129-80293148 | None:intergenic | 40.0% |
| !! | ATTGCCTTGAGTTTTGGTCA+TGG | + | chr1.1:80297249-80297268 | None:intergenic | 40.0% |
| !! | CAAATCTGTGTTGGTGATGT+CGG | - | chr1.1:80298037-80298056 | MS.gene44409:intron | 40.0% |
| !! | CCTTCGGCAAGTTGATAATT+TGG | + | chr1.1:80294427-80294446 | None:intergenic | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | - | chr1.1:80295694-80295713 | MS.gene44409:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | + | chr1.1:80297244-80297263 | None:intergenic | 40.0% |
| !! | GGTTGTTCTTTTTAGAGGGA+TGG | + | chr1.1:80293860-80293879 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr1.1:80293200-80293219 | MS.gene44409:intron | 40.0% |
| AAAAGCTGTGCAAGGGAATG+TGG | - | chr1.1:80295591-80295610 | MS.gene44409:CDS | 45.0% | |
| AAAGCTGTGCAAGGGAATGT+GGG | - | chr1.1:80295592-80295611 | MS.gene44409:CDS | 45.0% | |
| AAGCATGGGTACTCCAAACA+TGG | + | chr1.1:80296645-80296664 | None:intergenic | 45.0% | |
| AAGCTACACAGGTTTGTGTG+CGG | - | chr1.1:80294491-80294510 | MS.gene44409:intron | 45.0% | |
| AAGTTGTTCGGTCATTGCTC+AGG | - | chr1.1:80295830-80295849 | MS.gene44409:intron | 45.0% | |
| ACTGTGAAACGACCCAAGTT+GGG | + | chr1.1:80294691-80294710 | None:intergenic | 45.0% | |
| AGAGCTTGCCGAATAGAGAA+TGG | + | chr1.1:80293917-80293936 | None:intergenic | 45.0% | |
| AGGAGTGGTTACAGTTGGAA+TGG | + | chr1.1:80292521-80292540 | None:intergenic | 45.0% | |
| ATCCCAGTCAGCAATGATTG+TGG | + | chr1.1:80298602-80298621 | None:intergenic | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | + | chr1.1:80298813-80298832 | None:intergenic | 45.0% | |
| ATGGAAGGAGTGGTTACAGT+TGG | + | chr1.1:80292526-80292545 | None:intergenic | 45.0% | |
| ATTGTGATGCTGGGTGAGAA+TGG | - | chr1.1:80297314-80297333 | MS.gene44409:CDS | 45.0% | |
| CAATTGAGATAAGCTCCACG+AGG | - | chr1.1:80293692-80293711 | MS.gene44409:CDS | 45.0% | |
| CAGGGCAGACACAATAACTA+AGG | + | chr1.1:80297787-80297806 | None:intergenic | 45.0% | |
| CATGTAATGATTGGGCCATG+TGG | - | chr1.1:80293420-80293439 | MS.gene44409:intron | 45.0% | |
| CATTGTGTTGGGTGTGAAAG+GGG | - | chr1.1:80295087-80295106 | MS.gene44409:intron | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | - | chr1.1:80297242-80297261 | MS.gene44409:CDS | 45.0% | |
| CCACGTGGCATGTAATGATT+GGG | - | chr1.1:80293412-80293431 | MS.gene44409:intron | 45.0% | |
| CGACATCACCAACACAGATT+TGG | + | chr1.1:80298039-80298058 | None:intergenic | 45.0% | |
| CGTTGAGCACGATTTCATCA+TGG | - | chr1.1:80298508-80298527 | MS.gene44409:intron | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | - | chr1.1:80296079-80296098 | MS.gene44409:intron | 45.0% | |
| GAATGGGTCGTTTGAGGAAA+TGG | + | chr1.1:80293900-80293919 | None:intergenic | 45.0% | |
| GACAGAGAGCAAAAGAATGC+TGG | - | chr1.1:80298855-80298874 | MS.gene44409:CDS | 45.0% | |
| GAGCAATGACCGAACAACTT+GGG | + | chr1.1:80295830-80295849 | None:intergenic | 45.0% | |
| GAGCTTGCCGAATAGAGAAT+GGG | + | chr1.1:80293916-80293935 | None:intergenic | 45.0% | |
| GAGGTTCAGAATCTTTCTGG+TGG | - | chr1.1:80297655-80297674 | MS.gene44409:intron | 45.0% | |
| GATCCACCTTCTATAGTGTC+AGG | + | chr1.1:80297463-80297482 | None:intergenic | 45.0% | |
| GATTAGAGGCCAGAAGGAAA+AGG | + | chr1.1:80295463-80295482 | None:intergenic | 45.0% | |
| GTAGACGGGAAAGAAAAGAC+AGG | + | chr1.1:80297806-80297825 | None:intergenic | 45.0% | |
| GTTACAACACCATATGCACC+AGG | + | chr1.1:80296058-80296077 | None:intergenic | 45.0% | |
| GTTGCGTTATGCCTTTGTCT+TGG | - | chr1.1:80297691-80297710 | MS.gene44409:intron | 45.0% | |
| GTTTGAGGAAATGGGAGAGT+TGG | + | chr1.1:80293891-80293910 | None:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | - | chr1.1:80296629-80296648 | MS.gene44409:intron | 45.0% | |
| TACTGTGAAACGACCCAAGT+TGG | + | chr1.1:80294692-80294711 | None:intergenic | 45.0% | |
| TATGGCAAACCTGGTGCATA+TGG | - | chr1.1:80296046-80296065 | MS.gene44409:intron | 45.0% | |
| TCCTTGGGCGGAAATTAGTT+GGG | + | chr1.1:80298812-80298831 | None:intergenic | 45.0% | |
| TGAAAGCTGCCCAAGTTGTT+CGG | - | chr1.1:80295818-80295837 | MS.gene44409:intron | 45.0% | |
| TGACCACAAAAGCTGTGCAA+GGG | - | chr1.1:80295584-80295603 | MS.gene44409:CDS | 45.0% | |
| TGAGCAATGACCGAACAACT+TGG | + | chr1.1:80295831-80295850 | None:intergenic | 45.0% | |
| TGCAGCAACAATACGCTGTT+CGG | + | chr1.1:80298441-80298460 | None:intergenic | 45.0% | |
| TGGAATTTCCGCCTTCTTTG+TGG | - | chr1.1:80295003-80295022 | MS.gene44409:intron | 45.0% | |
| TGGATGCGGTATCTGTGTTA+AGG | - | chr1.1:80294289-80294308 | MS.gene44409:intron | 45.0% | |
| TGTCCACAATCATTGCTGAC+TGG | - | chr1.1:80298596-80298615 | MS.gene44409:intron | 45.0% | |
| TTAACGGCTAACTAACGGCA+AGG | - | chr1.1:80293467-80293486 | MS.gene44409:intron | 45.0% | |
| TTGACCACAAAAGCTGTGCA+AGG | - | chr1.1:80295583-80295602 | MS.gene44409:CDS | 45.0% | |
| TTGAGGAAATGGGAGAGTTG+GGG | + | chr1.1:80293889-80293908 | None:intergenic | 45.0% | |
| TTGGTGCAGCAAAAACGTAC+AGG | + | chr1.1:80296538-80296557 | None:intergenic | 45.0% | |
| TTGTGATGCTGGGTGAGAAT+GGG | - | chr1.1:80297315-80297334 | MS.gene44409:CDS | 45.0% | |
| ! | AAATGAAGGTACGGGTACGT+TGG | - | chr1.1:80296374-80296393 | MS.gene44409:intron | 45.0% |
| ! | AGGGCTGTGATGTTACTTAC+CGG | + | chr1.1:80294142-80294161 | None:intergenic | 45.0% |
| ! | ATTCCCTTGCACAGCTTTTG+TGG | + | chr1.1:80295590-80295609 | None:intergenic | 45.0% |
| ! | CAGATTTGGCTTCTCTAGTG+TGG | + | chr1.1:80298025-80298044 | None:intergenic | 45.0% |
| ! | CCTTCTCCTTTTATTCAGGC+CGG | - | chr1.1:80297427-80297446 | MS.gene44409:intron | 45.0% |
| ! | CGAGCACGATCTTAGTGTTT+TGG | - | chr1.1:80295994-80296013 | MS.gene44409:intron | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | chr1.1:80296634-80296653 | None:intergenic | 45.0% |
| ! | GGCATATCTCTAGGAAGTGT+GGG | + | chr1.1:80295123-80295142 | None:intergenic | 45.0% |
| ! | GTCCACAATCATTGCTGACT+GGG | - | chr1.1:80298597-80298616 | MS.gene44409:intron | 45.0% |
| ! | GTCGACTGCACTTAAGGTTT+TGG | - | chr1.1:80294651-80294670 | MS.gene44409:intron | 45.0% |
| ! | GTTTTCTTTGGGCCATTGTG+CGG | + | chr1.1:80293079-80293098 | None:intergenic | 45.0% |
| ! | TGGCATATCTCTAGGAAGTG+TGG | + | chr1.1:80295124-80295143 | None:intergenic | 45.0% |
| !! | ACTGCACTTAAGGTTTTGGC+TGG | - | chr1.1:80294655-80294674 | MS.gene44409:intron | 45.0% |
| !! | ATGATGCATAGGTACCGGTA+CGG | - | chr1.1:80296303-80296322 | MS.gene44409:intron | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | + | chr1.1:80298824-80298843 | None:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | + | chr1.1:80297245-80297264 | None:intergenic | 45.0% |
| !! | CTTGGTTTGGTTGGGACAAA+TGG | - | chr1.1:80294619-80294638 | MS.gene44409:intron | 45.0% |
| !! | TAGTGTAAGGGTGCTACCTT+GGG | - | chr1.1:80292640-80292659 | MS.gene44409:intron | 45.0% |
| !! | TGAACAGTTGATGGACCAAG+AGG | - | chr1.1:80297636-80297655 | MS.gene44409:intron | 45.0% |
| !! | AAAAAATTAACAAAAATATA+AGG | + | chr1.1:80296793-80296812 | None:intergenic | 5.0% |
| !! | AATTAAAAAAATAAAACAAT+AGG | + | chr1.1:80293167-80293186 | None:intergenic | 5.0% |
| !! | ATTAAAAAAATAAAACAATA+GGG | + | chr1.1:80293166-80293185 | None:intergenic | 5.0% |
| !!! | ATTTTTTATTTATTTTTTCA+CGG | + | chr1.1:80293777-80293796 | None:intergenic | 5.0% |
| !!! | TAATTTTAACTTTTTTTTAA+CGG | - | chr1.1:80293451-80293470 | MS.gene44409:intron | 5.0% |
| !!! | TTTTTTAATTAAAATTGTAA+GGG | - | chr1.1:80293177-80293196 | MS.gene44409:intron | 5.0% |
| !!! | TTTTTTTAATTAAAATTGTA+AGG | - | chr1.1:80293176-80293195 | MS.gene44409:intron | 5.0% |
| AAGCTGTGCAAGGGAATGTG+GGG | - | chr1.1:80295593-80295612 | MS.gene44409:CDS | 50.0% | |
| AATCAGGCGGTTCCTGCAAA+TGG | + | chr1.1:80294793-80294812 | None:intergenic | 50.0% | |
| AATGGGAGAGTTGGGGGATT+AGG | + | chr1.1:80293882-80293901 | None:intergenic | 50.0% | |
| ACCCAACTAATTTCCGCCCA+AGG | - | chr1.1:80298808-80298827 | MS.gene44409:intron | 50.0% | |
| AGATGTCTGCAGGCTGTTGT+AGG | + | chr1.1:80298385-80298404 | None:intergenic | 50.0% | |
| AGCTGCCTAATTGCGGCATT+TGG | - | chr1.1:80295035-80295054 | MS.gene44409:intron | 50.0% | |
| AGTTGTCCTGTCGTCAGAAC+CGG | - | chr1.1:80294120-80294139 | MS.gene44409:CDS | 50.0% | |
| ATGAGCAGCTGGCTAGTGTA+AGG | - | chr1.1:80292627-80292646 | MS.gene44409:intron | 50.0% | |
| ATGCCGCAATTAGGCAGCTA+AGG | + | chr1.1:80295034-80295053 | None:intergenic | 50.0% | |
| ATGGGAGAGTTGGGGGATTA+GGG | + | chr1.1:80293881-80293900 | None:intergenic | 50.0% | |
| ATTTGCAGGAACCGCCTGAT+TGG | - | chr1.1:80294792-80294811 | MS.gene44409:intron | 50.0% | |
| CAACCGCAATGGCAAACCTT+TGG | + | chr1.1:80295729-80295748 | None:intergenic | 50.0% | |
| CAATGGAGTACAAGTCCTCG+TGG | + | chr1.1:80293710-80293729 | None:intergenic | 50.0% | |
| CCCAATCATTACATGCCACG+TGG | + | chr1.1:80293415-80293434 | None:intergenic | 50.0% | |
| CCGGCCTGAATAAAAGGAGA+AGG | + | chr1.1:80297430-80297449 | None:intergenic | 50.0% | |
| CGTCGCAGTTGTCAACATGT+CGG | - | chr1.1:80294023-80294042 | MS.gene44409:CDS | 50.0% | |
| CTAAGGGCGAACCACAAAGA+AGG | + | chr1.1:80295017-80295036 | None:intergenic | 50.0% | |
| GAATGTAAGGCGGGTCTACA+GGG | - | chr1.1:80296936-80296955 | MS.gene44409:CDS | 50.0% | |
| GACGACCTTCATTCGTATGC+TGG | - | chr1.1:80297346-80297365 | MS.gene44409:intron | 50.0% | |
| GCAACCCAAATGCCGCAATT+AGG | + | chr1.1:80295043-80295062 | None:intergenic | 50.0% | |
| GCATCTGTCGTTGCTAACGA+TGG | + | chr1.1:80294067-80294086 | None:intergenic | 50.0% | |
| GCCACGTGGCATGTAATGAT+TGG | - | chr1.1:80293411-80293430 | MS.gene44409:intron | 50.0% | |
| GCTCCAAAGGTTTGCCATTG+CGG | - | chr1.1:80295723-80295742 | MS.gene44409:CDS | 50.0% | |
| GCTGCCTAATTGCGGCATTT+GGG | - | chr1.1:80295036-80295055 | MS.gene44409:intron | 50.0% | |
| GGTTACAGTTGGAATGGCAG+TGG | + | chr1.1:80292515-80292534 | None:intergenic | 50.0% | |
| TGAATGTAAGGCGGGTCTAC+AGG | - | chr1.1:80296935-80296954 | MS.gene44409:CDS | 50.0% | |
| TGAGCAGCTGGCTAGTGTAA+GGG | - | chr1.1:80292628-80292647 | MS.gene44409:intron | 50.0% | |
| TGAGGAAATGGGAGAGTTGG+GGG | + | chr1.1:80293888-80293907 | None:intergenic | 50.0% | |
| TGCCGCAATTAGGCAGCTAA+GGG | + | chr1.1:80295033-80295052 | None:intergenic | 50.0% | |
| TGGGAAGTCGACTGCACTTA+AGG | - | chr1.1:80294645-80294664 | MS.gene44409:intron | 50.0% | |
| TGTGTTGGAGGCTGCAATGA+AGG | + | chr1.1:80295065-80295084 | None:intergenic | 50.0% | |
| TTGGATGGCAACAACCGCAA+TGG | + | chr1.1:80295740-80295759 | None:intergenic | 50.0% | |
| ! | TTCAGGTTTGCTCTTGCCCA+AGG | + | chr1.1:80292659-80292678 | None:intergenic | 50.0% |
| !! | ACATGGAGAAGTACCGGTAC+CGG | + | chr1.1:80296628-80296647 | None:intergenic | 50.0% |
| !! | CTAGTGTAAGGGTGCTACCT+TGG | - | chr1.1:80292639-80292658 | MS.gene44409:intron | 50.0% |
| !! | GGCAAGTGCTTGGTTTGGTT+GGG | - | chr1.1:80294611-80294630 | MS.gene44409:intron | 50.0% |
| !! | TACTTACCGGTTCTGACGAC+AGG | + | chr1.1:80294129-80294148 | None:intergenic | 50.0% |
| !! | TCTTTTTGCTATGCGCCACG+TGG | - | chr1.1:80293397-80293416 | MS.gene44409:intron | 50.0% |
| ACAGGTACCCGTACCCATAC+CGG | + | chr1.1:80296332-80296351 | None:intergenic | 55.0% | |
| ACCAAACCAAGCACTTGCCC+CGG | + | chr1.1:80294610-80294629 | None:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+CGG | - | chr1.1:80296606-80296625 | MS.gene44409:intron | 55.0% | |
| AGGGCGAACCACAAAGAAGG+CGG | + | chr1.1:80295014-80295033 | None:intergenic | 55.0% | |
| AGGGTGCGCGAGAAATCAAC+AGG | - | chr1.1:80292997-80293016 | MS.gene44409:intron | 55.0% | |
| ATGCTGGGTGAGAATGGGAC+AGG | - | chr1.1:80297320-80297339 | MS.gene44409:CDS | 55.0% | |
| CCATTGTGCGGCTTAGCTGT+GGG | + | chr1.1:80293067-80293086 | None:intergenic | 55.0% | |
| CGCCCTTAGCTGCCTAATTG+CGG | - | chr1.1:80295028-80295047 | MS.gene44409:intron | 55.0% | |
| CTAGGTTGCAGAGACTCCAC+AGG | - | chr1.1:80297178-80297197 | MS.gene44409:intron | 55.0% | |
| GCGCGAGAAATCAACAGGGT+GGG | - | chr1.1:80293002-80293021 | MS.gene44409:intron | 55.0% | |
| GGGGGTGAGTGTATGCATCA+CGG | + | chr1.1:80297582-80297601 | None:intergenic | 55.0% | |
| GGGTGCGCGAGAAATCAACA+GGG | - | chr1.1:80292998-80293017 | MS.gene44409:intron | 55.0% | |
| GGTCATTGCTCAGGCCCAAT+AGG | - | chr1.1:80295839-80295858 | MS.gene44409:intron | 55.0% | |
| GTGCTTGAGCAGTGGGATTC+AGG | + | chr1.1:80292676-80292695 | None:intergenic | 55.0% | |
| TACGGTACCCGGTATGGGTA+CGG | - | chr1.1:80296321-80296340 | MS.gene44409:intron | 55.0% | |
| TGCGCGAGAAATCAACAGGG+TGG | - | chr1.1:80293001-80293020 | MS.gene44409:intron | 55.0% | |
| TGTGTTGGGTGTGAAAGGGG+TGG | - | chr1.1:80295090-80295109 | MS.gene44409:intron | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | - | chr1.1:80295710-80295729 | MS.gene44409:CDS | 55.0% | |
| !! | ATAGGTACCGGTACGGTACC+CGG | - | chr1.1:80296310-80296329 | MS.gene44409:intron | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | + | chr1.1:80296627-80296646 | None:intergenic | 55.0% |
| !! | GGGCAAGTGCTTGGTTTGGT+TGG | - | chr1.1:80294610-80294629 | MS.gene44409:intron | 55.0% |
| ACCATACGCGTACCCGGTAC+CGG | - | chr1.1:80296612-80296631 | MS.gene44409:intron | 60.0% | |
| ACCGGTACGGTACCCGGTAT+GGG | - | chr1.1:80296316-80296335 | MS.gene44409:intron | 60.0% | |
| ACGGTACCCGGTATGGGTAC+GGG | - | chr1.1:80296322-80296341 | MS.gene44409:intron | 60.0% | |
| CAGGTACCCGTACCCATACC+GGG | + | chr1.1:80296331-80296350 | None:intergenic | 60.0% | |
| CCCACAGCTAAGCCGCACAA+TGG | - | chr1.1:80293064-80293083 | MS.gene44409:intron | 60.0% | |
| GACTCCACAGGAAACTGCCG+AGG | - | chr1.1:80297190-80297209 | MS.gene44409:intron | 60.0% | |
| GCCATTGTGCGGCTTAGCTG+TGG | + | chr1.1:80293068-80293087 | None:intergenic | 60.0% | |
| GCTTCCTCGGCAGTTTCCTG+TGG | + | chr1.1:80297197-80297216 | None:intergenic | 60.0% | |
| GGCGGGTCTACAGGGTAGTA+AGG | - | chr1.1:80296944-80296963 | MS.gene44409:CDS | 60.0% | |
| TACCGGTACGGTACCCGGTA+TGG | - | chr1.1:80296315-80296334 | MS.gene44409:intron | 60.0% | |
| TGTGCAAGGGAATGTGGGGC+AGG | - | chr1.1:80295597-80295616 | MS.gene44409:CDS | 60.0% | |
| ! | ACCCATACCGGGTACCGTAC+CGG | + | chr1.1:80296320-80296339 | None:intergenic | 60.0% |
| !! | ATTGCAGGTTGCCGGTTCCC+AGG | - | chr1.1:80294584-80294603 | MS.gene44409:intron | 60.0% |
| GCAGGAACCGCCTGATTGGC+AGG | - | chr1.1:80294796-80294815 | MS.gene44409:intron | 65.0% | |
| GCCGGGGCAAGTGCTTGGTT+TGG | - | chr1.1:80294606-80294625 | MS.gene44409:intron | 65.0% | |
| ! | ACCGGTACCGGGTACGCGTA+TGG | + | chr1.1:80296616-80296635 | None:intergenic | 65.0% |
| ACCAAGCACTTGCCCCGGCC+TGG | + | chr1.1:80294605-80294624 | None:intergenic | 70.0% | |
| ACTTGCCCCGGCCTGGGAAC+CGG | + | chr1.1:80294598-80294617 | None:intergenic | 70.0% | |
| CCAAGCACTTGCCCCGGCCT+GGG | + | chr1.1:80294604-80294623 | None:intergenic | 70.0% | |
| !! | AGGTTGCCGGTTCCCAGGCC+GGG | - | chr1.1:80294589-80294608 | MS.gene44409:intron | 70.0% |
| !! | CAGGTTGCCGGTTCCCAGGC+CGG | - | chr1.1:80294588-80294607 | MS.gene44409:intron | 70.0% |
| CCCAGGCCGGGGCAAGTGCT+TGG | - | chr1.1:80294601-80294620 | MS.gene44409:intron | 75.0% | |
| !! | GGTTGCCGGTTCCCAGGCCG+GGG | - | chr1.1:80294590-80294609 | MS.gene44409:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 80292475 | 80298902 | 80292475 | ID=MS.gene44409 |
| chr1.1 | mRNA | 80292475 | 80298902 | 80292475 | ID=MS.gene44409.t1;Parent=MS.gene44409 |
| chr1.1 | exon | 80298849 | 80298902 | 80298849 | ID=MS.gene44409.t1.exon1;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80298849 | 80298902 | 80298849 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80298667 | 80298769 | 80298667 | ID=MS.gene44409.t1.exon2;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80298667 | 80298769 | 80298667 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80297236 | 80297346 | 80297236 | ID=MS.gene44409.t1.exon3;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80297236 | 80297346 | 80297236 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80297067 | 80297152 | 80297067 | ID=MS.gene44409.t1.exon4;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80297067 | 80297152 | 80297067 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80296876 | 80296973 | 80296876 | ID=MS.gene44409.t1.exon5;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80296876 | 80296973 | 80296876 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80296669 | 80296786 | 80296669 | ID=MS.gene44409.t1.exon6;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80296669 | 80296786 | 80296669 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80296483 | 80296577 | 80296483 | ID=MS.gene44409.t1.exon7;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80296483 | 80296577 | 80296483 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80295517 | 80295798 | 80295517 | ID=MS.gene44409.t1.exon8;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80295517 | 80295798 | 80295517 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80295203 | 80295398 | 80295203 | ID=MS.gene44409.t1.exon9;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80295203 | 80295398 | 80295203 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80294010 | 80294195 | 80294010 | ID=MS.gene44409.t1.exon10;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80294010 | 80294195 | 80294010 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80293660 | 80293932 | 80293660 | ID=MS.gene44409.t1.exon11;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80293660 | 80293932 | 80293660 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80292740 | 80292985 | 80292740 | ID=MS.gene44409.t1.exon12;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80292740 | 80292985 | 80292740 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| chr1.1 | exon | 80292475 | 80292594 | 80292475 | ID=MS.gene44409.t1.exon13;Parent=MS.gene44409.t1 |
| chr1.1 | CDS | 80292475 | 80292594 | 80292475 | ID=cds.MS.gene44409.t1;Parent=MS.gene44409.t1 |
| Gene Sequence |
| Protein sequence |
