Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44410.t1 | XP_003592706.1 | 100 | 606 | 0 | 0 | 56 | 661 | 1 | 606 | 0.00E+00 | 1219.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44410.t1 | Q8LPJ4 | 91.3 | 606 | 52 | 1 | 56 | 661 | 1 | 605 | 0.0e+00 | 1119.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44410.t1 | G7IE72 | 100.0 | 606 | 0 | 0 | 56 | 661 | 1 | 606 | 0.0e+00 | 1219.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44410 | MS.gene44915 | PPI |
| MS.gene44410 | MS.gene56742 | PPI |
| MS.gene44410 | MS.gene68299 | PPI |
| MS.gene44410 | MS.gene027546 | PPI |
| MS.gene44410 | MS.gene20554 | PPI |
| MS.gene43933 | MS.gene44410 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44410.t1 | MTR_1g114170 | 100.000 | 606 | 0 | 0 | 56 | 661 | 1 | 606 | 0.0 | 1258 |
| MS.gene44410.t1 | MTR_1g025075 | 96.046 | 607 | 23 | 1 | 56 | 661 | 1 | 607 | 0.0 | 1214 |
| MS.gene44410.t1 | MTR_4g007890 | 87.043 | 602 | 76 | 2 | 60 | 661 | 1 | 600 | 0.0 | 1084 |
| MS.gene44410.t1 | MTR_1g025075 | 96.869 | 511 | 16 | 0 | 151 | 661 | 17 | 527 | 0.0 | 1029 |
| MS.gene44410.t1 | MTR_1g024860 | 84.699 | 549 | 63 | 4 | 56 | 603 | 1 | 529 | 0.0 | 941 |
| MS.gene44410.t1 | MTR_1g024860 | 28.458 | 253 | 129 | 8 | 429 | 656 | 103 | 328 | 3.89e-22 | 100 |
| MS.gene44410.t1 | MTR_1567s0010 | 28.571 | 196 | 124 | 6 | 416 | 600 | 245 | 435 | 2.22e-12 | 70.1 |
| MS.gene44410.t1 | MTR_3g095010 | 29.586 | 169 | 104 | 5 | 432 | 595 | 461 | 619 | 6.40e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44410.t1 | AT4G19210 | 91.254 | 606 | 52 | 1 | 56 | 661 | 1 | 605 | 0.0 | 1157 |
| MS.gene44410.t1 | AT3G13640 | 78.218 | 606 | 129 | 1 | 56 | 661 | 1 | 603 | 0.0 | 1004 |
| MS.gene44410.t1 | AT4G30300 | 66.477 | 176 | 56 | 3 | 410 | 583 | 1 | 175 | 3.95e-70 | 226 |
| MS.gene44410.t1 | AT4G30300 | 29.375 | 160 | 95 | 3 | 159 | 318 | 21 | 162 | 1.67e-12 | 67.0 |
| MS.gene44410.t1 | AT4G33460 | 31.481 | 162 | 98 | 6 | 429 | 582 | 70 | 226 | 5.13e-11 | 64.3 |
Find 0 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTTAATTTAATTAT+AGG | - | 10799:3506-3525 | MS.gene44410:intron | 0.0% |
| !!! | TAATTTAATATTTATTTTAA+TGG | + | 10799:6020-6039 | MS.gene44410:intergenic | 0.0% |
| !! | AAAAAGAAATATTTACAATT+TGG | + | 10799:2687-2706 | MS.gene44410:intergenic | 10.0% |
| !! | AAAAGAAATATTTACAATTT+GGG | + | 10799:2686-2705 | MS.gene44410:intergenic | 10.0% |
| !! | TATTCTAATAAATTAGATAT+TGG | - | 10799:6328-6347 | MS.gene44410:CDS | 10.0% |
| !! | TTAAAAAAATAAAACAATAG+GGG | + | 10799:2468-2487 | MS.gene44410:intergenic | 10.0% |
| !!! | ATTAGAATATTTTTATTTCA+AGG | + | 10799:6317-6336 | MS.gene44410:intergenic | 10.0% |
| !! | AAAATGAAATCTGAAAAAAA+GGG | + | 10799:3464-3483 | MS.gene44410:intergenic | 15.0% |
| !! | AAATAAAAATAGATATGGTT+CGG | - | 10799:5834-5853 | MS.gene44410:intron | 15.0% |
| !! | AAATCATATATAAATAGTGA+TGG | + | 10799:4543-4562 | MS.gene44410:intergenic | 15.0% |
| !! | AATGTCTTAAATTAAATCTT+TGG | + | 10799:4515-4534 | MS.gene44410:intergenic | 15.0% |
| !! | ATGTACTTATAATTAAAGAA+TGG | - | 10799:2079-2098 | MS.gene44410:CDS | 15.0% |
| !! | ATGTCTTAAATTAAATCTTT+GGG | + | 10799:4514-4533 | MS.gene44410:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAAATCTCA+AGG | + | 10799:6997-7016 | MS.gene44410:intergenic | 15.0% |
| !! | CTTTCTGTTTAAAAAATTTA+GGG | - | 10799:7932-7951 | MS.gene44410:CDS | 15.0% |
| !! | GAAATAAAATGTATACATTT+AGG | + | 10799:7424-7443 | MS.gene44410:intergenic | 15.0% |
| !! | TAACCAAATAAAAATAGATA+TGG | - | 10799:5829-5848 | MS.gene44410:intron | 15.0% |
| !! | TCTTTCTGTTTAAAAAATTT+AGG | - | 10799:7931-7950 | MS.gene44410:CDS | 15.0% |
| !! | TTCTTATATTCTATATTAGA+AGG | + | 10799:4267-4286 | MS.gene44410:intergenic | 15.0% |
| !!! | AATTTTAAAAAATGAAGGTA+CGG | - | 10799:5625-5644 | MS.gene44410:intron | 15.0% |
| !!! | AGATTTTTTTTTTTTTTGAG+GGG | - | 10799:6999-7018 | MS.gene44410:intron | 15.0% |
| !!! | CAAAAGTATATTTCTTATAA+TGG | + | 10799:1883-1902 | MS.gene44410:intergenic | 15.0% |
| !!! | GAGATTTTTTTTTTTTTTGA+GGG | - | 10799:6998-7017 | MS.gene44410:intron | 15.0% |
| !!! | TGAGATTTTTTTTTTTTTTG+AGG | - | 10799:6997-7016 | MS.gene44410:intron | 15.0% |
| !! | AAAGAATGAACATAAAATGA+AGG | + | 10799:6289-6308 | MS.gene44410:intergenic | 20.0% |
| !! | AAATATAAATGCAATTTGAG+TGG | - | 10799:5470-5489 | MS.gene44410:intron | 20.0% |
| !! | AAGAAAATTAAATAGATGGA+AGG | + | 10799:1844-1863 | MS.gene44410:intergenic | 20.0% |
| !! | AATATAAATGCAATTTGAGT+GGG | - | 10799:5471-5490 | MS.gene44410:intron | 20.0% |
| !! | AATCAAAACTAAAGTGATTA+TGG | + | 10799:6092-6111 | MS.gene44410:intergenic | 20.0% |
| !! | ACAAGTTAATGAATCAAATA+TGG | + | 10799:2638-2657 | MS.gene44410:intergenic | 20.0% |
| !! | ACAATACAAATTTCAAAAAC+AGG | + | 10799:4708-4727 | MS.gene44410:intergenic | 20.0% |
| !! | AGCAAAGAAAATTAAATAGA+TGG | + | 10799:1848-1867 | MS.gene44410:intergenic | 20.0% |
| !! | ATATCTTTGAGTGTTAATAA+TGG | - | 10799:3657-3676 | MS.gene44410:intron | 20.0% |
| !! | ATCAAAACTAAAGTGATTAT+GGG | + | 10799:6091-6110 | MS.gene44410:intergenic | 20.0% |
| !! | ATTAATGAATCATGAATGTA+AGG | - | 10799:6183-6202 | MS.gene44410:CDS | 20.0% |
| !! | ATTCATATAATATGATTGAC+GGG | + | 10799:2141-2160 | MS.gene44410:intergenic | 20.0% |
| !! | ATTCATATTTAACTCAATAG+GGG | + | 10799:2404-2423 | MS.gene44410:intergenic | 20.0% |
| !! | ATTGAAATAAACATGATTAG+AGG | + | 10799:4780-4799 | MS.gene44410:intergenic | 20.0% |
| !! | CATTCATATAATATGATTGA+CGG | + | 10799:2142-2161 | MS.gene44410:intergenic | 20.0% |
| !! | CATTCATATTTAACTCAATA+GGG | + | 10799:2405-2424 | MS.gene44410:intergenic | 20.0% |
| !! | CTTGCACTTTATAAAAAAAT+TGG | + | 10799:2803-2822 | MS.gene44410:intergenic | 20.0% |
| !! | GAAAATGAAATCTGAAAAAA+AGG | + | 10799:3465-3484 | MS.gene44410:intergenic | 20.0% |
| !! | GACAATGCATAATATATATA+AGG | + | 10799:2970-2989 | MS.gene44410:intergenic | 20.0% |
| !! | GTAATTGTAATTATAATTGC+AGG | - | 10799:3872-3891 | MS.gene44410:intron | 20.0% |
| !! | TAATGAATCAAATATGGAAA+TGG | + | 10799:2632-2651 | MS.gene44410:intergenic | 20.0% |
| !! | TATCTTTGAGTGTTAATAAT+GGG | - | 10799:3658-3677 | MS.gene44410:intron | 20.0% |
| !! | TTCAATATACGTTATAATAC+AGG | - | 10799:4794-4813 | MS.gene44410:intron | 20.0% |
| !!! | AACTAAAAAAAGGCTAATTT+TGG | + | 10799:4022-4041 | MS.gene44410:intergenic | 20.0% |
| !!! | AGTATATTTCTTATAATGGA+TGG | + | 10799:1879-1898 | MS.gene44410:intergenic | 20.0% |
| !!! | ATTTTAAAAAATGAAGGTAC+GGG | - | 10799:5626-5645 | MS.gene44410:intron | 20.0% |
| !!! | CAATTTTTTTATAAAGTGCA+AGG | - | 10799:2801-2820 | MS.gene44410:intron | 20.0% |
| !!! | CGTCAAATTTTAAAAAATGA+AGG | - | 10799:5620-5639 | MS.gene44410:intron | 20.0% |
| !!! | GAACCATATCTATTTTTATT+TGG | + | 10799:5835-5854 | MS.gene44410:intergenic | 20.0% |
| !!! | GATTTTTTTTTTTTTTGAGG+GGG | - | 10799:7000-7019 | MS.gene44410:intron | 20.0% |
| !!! | GCATATTTGAAAATTTTACA+GGG | - | 10799:2281-2300 | MS.gene44410:intron | 20.0% |
| !!! | TCTATCTCTTAATTTTTTCA+TGG | - | 10799:2217-2236 | MS.gene44410:CDS | 20.0% |
| !!! | TTTATTTTTTGAGCAATTCA+CGG | + | 10799:3046-3065 | MS.gene44410:intergenic | 20.0% |
| ! | AAAAAATACAATGGAGTACA+AGG | + | 10799:2918-2937 | MS.gene44410:intergenic | 25.0% |
| ! | AAGTAATACTCATCCAAAAT+AGG | - | 10799:2330-2349 | MS.gene44410:intron | 25.0% |
| ! | AATGTATTCAAGAATGTAGA+CGG | + | 10799:7080-7099 | MS.gene44410:intergenic | 25.0% |
| ! | AATTACAATCAGAAACTGAA+TGG | + | 10799:3282-3301 | MS.gene44410:intergenic | 25.0% |
| ! | ACATAGCTGAAAAAATAAAG+AGG | + | 10799:5225-5244 | MS.gene44410:intergenic | 25.0% |
| ! | AGGAAATTAAACAAACCTAT+TGG | + | 10799:5117-5136 | MS.gene44410:intergenic | 25.0% |
| ! | AGTTTCTGCTTTATATATTG+TGG | - | 10799:5141-5160 | MS.gene44410:intron | 25.0% |
| ! | ATAATTTGGATAGCTTCAAA+AGG | + | 10799:3716-3735 | MS.gene44410:intergenic | 25.0% |
| ! | ATATAAAGCAGAAACTAAAG+AGG | + | 10799:5137-5156 | MS.gene44410:intergenic | 25.0% |
| ! | ATATAAATGCAATTTGAGTG+GGG | - | 10799:5472-5491 | MS.gene44410:intron | 25.0% |
| ! | ATGATGTGTTTGTTTAAATG+GGG | + | 10799:5956-5975 | MS.gene44410:intergenic | 25.0% |
| ! | ATGGTGTTTGTGAATATATT+TGG | - | 10799:5527-5546 | MS.gene44410:intron | 25.0% |
| ! | ATTGCTAACGATATTGAATA+AGG | + | 10799:4209-4228 | MS.gene44410:intergenic | 25.0% |
| ! | CAAATATGGAAATGGTTTAT+TGG | + | 10799:2624-2643 | MS.gene44410:intergenic | 25.0% |
| ! | CACTACCAAAAAAAATACAA+TGG | + | 10799:2927-2946 | MS.gene44410:intergenic | 25.0% |
| ! | CATAATATATATAAGGTCTG+AGG | + | 10799:2963-2982 | MS.gene44410:intergenic | 25.0% |
| ! | GATGATGTGTTTGTTTAAAT+GGG | + | 10799:5957-5976 | MS.gene44410:intergenic | 25.0% |
| ! | GCATTCATATTTAACTCAAT+AGG | + | 10799:2406-2425 | MS.gene44410:intergenic | 25.0% |
| ! | GGAAATTAAACAAACCTATT+GGG | + | 10799:5116-5135 | MS.gene44410:intergenic | 25.0% |
| ! | TAAATATGAATGCTAACCAT+TGG | - | 10799:2413-2432 | MS.gene44410:intron | 25.0% |
| ! | TCAGTTTCTGATTGTAATTT+GGG | - | 10799:3283-3302 | MS.gene44410:intron | 25.0% |
| ! | TGCTATATTAAAACTACACA+TGG | + | 10799:4447-4466 | MS.gene44410:intergenic | 25.0% |
| ! | TTCACGGTATTATTATACAA+TGG | + | 10799:3030-3049 | MS.gene44410:intergenic | 25.0% |
| ! | TTCAGTTTCTGATTGTAATT+TGG | - | 10799:3282-3301 | MS.gene44410:intron | 25.0% |
| !! | CATCAAAAGCAAGATAATTT+TGG | - | 10799:5758-5777 | MS.gene44410:CDS | 25.0% |
| !! | CTTTTGATGAAAATAGTAGA+GGG | + | 10799:5747-5766 | MS.gene44410:intergenic | 25.0% |
| !! | GGCATATTTGAAAATTTTAC+AGG | - | 10799:2280-2299 | MS.gene44410:intron | 25.0% |
| !! | TGATGATGTGTTTGTTTAAA+TGG | + | 10799:5958-5977 | MS.gene44410:intergenic | 25.0% |
| !! | TTGAATTTCAGAACCTATTT+TGG | + | 10799:2346-2365 | MS.gene44410:intergenic | 25.0% |
| !! | TTTAGGGTTTGATATTTAGA+CGG | + | 10799:3133-3152 | MS.gene44410:intergenic | 25.0% |
| !! | TTTTGATGAAAATAGTAGAG+GGG | + | 10799:5746-5765 | MS.gene44410:intergenic | 25.0% |
| !!! | AATTAGCCTTTTTTTAGTTG+TGG | - | 10799:4023-4042 | MS.gene44410:intron | 25.0% |
| !!! | CATTGTATTTTTTTTGGTAG+TGG | - | 10799:2925-2944 | MS.gene44410:intron | 25.0% |
| !!! | GACTTTATTTGCTGTTTATA+TGG | - | 10799:5288-5307 | MS.gene44410:intron | 25.0% |
| !!! | GTACTCCATTGTATTTTTTT+TGG | - | 10799:2919-2938 | MS.gene44410:intron | 25.0% |
| !!! | TAAACATGTGTTGATTTTCT+TGG | - | 10799:7362-7381 | MS.gene44410:intron | 25.0% |
| !!! | TAAGTGTCATTGTTTTTCAA+TGG | - | 10799:7898-7917 | MS.gene44410:intron | 25.0% |
| !!! | TTATTTTTCTTTCCATTTGC+AGG | - | 10799:4081-4100 | MS.gene44410:intron | 25.0% |
| !!! | TTCATTACGTTTTGAATAAG+TGG | + | 10799:6239-6258 | MS.gene44410:intergenic | 25.0% |
| !!! | TTTTTTTAACGGCTAACTAA+CGG | - | 10799:2765-2784 | MS.gene44410:intron | 25.0% |
| AAAAAATGAGAGAGACATGA+AGG | - | 10799:4890-4909 | MS.gene44410:CDS | 30.0% | |
| AAAAATTATGTTGTGCTCTC+TGG | - | 10799:7975-7994 | MS.gene44410:CDS | 30.0% | |
| AAAATACCTTTCCAAGACAA+AGG | + | 10799:6965-6984 | MS.gene44410:intergenic | 30.0% | |
| AAAGATACCACTCATAGATA+CGG | - | 10799:3758-3777 | MS.gene44410:intron | 30.0% | |
| AAATTTGACGTATTACGTAC+AGG | + | 10799:5610-5629 | MS.gene44410:intergenic | 30.0% | |
| AACAGAAAATCTTAGGTTTC+GGG | - | 10799:5392-5411 | MS.gene44410:intron | 30.0% | |
| AATGAATCATGAATGTAAGG+CGG | - | 10799:6186-6205 | MS.gene44410:CDS | 30.0% | |
| AATGGAATCGAATTGAATTG+AGG | + | 10799:3259-3278 | MS.gene44410:intergenic | 30.0% | |
| AATTAAATAGATGGAAGGAG+TGG | + | 10799:1839-1858 | MS.gene44410:intergenic | 30.0% | |
| ACTACTTATTGAACAGTTGA+TGG | - | 10799:6887-6906 | MS.gene44410:intron | 30.0% | |
| ATATCTGAGGAATTGTGTAT+TGG | - | 10799:3572-3591 | MS.gene44410:intron | 30.0% | |
| ATCAACTGTTCAATAAGTAG+TGG | + | 10799:6888-6907 | MS.gene44410:intergenic | 30.0% | |
| ATCACATCTGATATAAACTG+GGG | + | 10799:6861-6880 | MS.gene44410:intergenic | 30.0% | |
| ATGGAATCGAATTGAATTGA+GGG | + | 10799:3258-3277 | MS.gene44410:intergenic | 30.0% | |
| ATGTATTCAAGAATGTAGAC+GGG | + | 10799:7079-7098 | MS.gene44410:intergenic | 30.0% | |
| CAAAAAATAGTGTAACTGCA+GGG | - | 10799:2861-2880 | MS.gene44410:intron | 30.0% | |
| CAACAAACTTGAATCAACAA+AGG | - | 10799:8092-8111 | MS.gene44410:intron | 30.0% | |
| CAACAGAAAATCTTAGGTTT+CGG | - | 10799:5391-5410 | MS.gene44410:intron | 30.0% | |
| CAAGTGTCTAACAGATAATT+GGG | + | 10799:6805-6824 | MS.gene44410:intergenic | 30.0% | |
| CAAGTTATAGATCGTAATGT+TGG | - | 10799:4942-4961 | MS.gene44410:CDS | 30.0% | |
| CAGAGTGATTTACTTTAGAT+TGG | - | 10799:7136-7155 | MS.gene44410:intron | 30.0% | |
| CATCACATCTGATATAAACT+GGG | + | 10799:6862-6881 | MS.gene44410:intergenic | 30.0% | |
| CATCCTTAAAATGGTGAAAA+CGG | - | 10799:2192-2211 | MS.gene44410:CDS | 30.0% | |
| GATAGAGTTATTGTTTACGA+GGG | - | 10799:7804-7823 | MS.gene44410:intron | 30.0% | |
| GGAATTAATATCTTCTTGTC+CGG | - | 10799:5360-5379 | MS.gene44410:intron | 30.0% | |
| GTCTATCCACAACTAAAAAA+AGG | + | 10799:4032-4051 | MS.gene44410:intergenic | 30.0% | |
| TAAAAGCTTAGATGATGTTC+AGG | - | 10799:6127-6146 | MS.gene44410:intron | 30.0% | |
| TAACAGATAATTGGGACTTT+GGG | + | 10799:6797-6816 | MS.gene44410:intergenic | 30.0% | |
| TAATGTTAGACTGTTGTGTT+GGG | + | 10799:4637-4656 | MS.gene44410:intergenic | 30.0% | |
| TAATTATAATTGCAGGTTGC+CGG | - | 10799:3879-3898 | MS.gene44410:intron | 30.0% | |
| TATAGGAAGATTATGTGTTG+AGG | - | 10799:3523-3542 | MS.gene44410:intron | 30.0% | |
| TATCTCCTACATCTCATTTA+CGG | - | 10799:5447-5466 | MS.gene44410:intron | 30.0% | |
| TATTTCCGTAAATGAGATGT+AGG | + | 10799:5455-5474 | MS.gene44410:intergenic | 30.0% | |
| TCATCACATCTGATATAAAC+TGG | + | 10799:6863-6882 | MS.gene44410:intergenic | 30.0% | |
| TCTGAATATCTATGATGCAT+AGG | - | 10799:5552-5571 | MS.gene44410:intron | 30.0% | |
| TGACACTTACAGATAAGAAA+AGG | + | 10799:7887-7906 | MS.gene44410:intergenic | 30.0% | |
| TGATAGAGTTATTGTTTACG+AGG | - | 10799:7803-7822 | MS.gene44410:intron | 30.0% | |
| TGATGTGTTTGTTTAAATGG+GGG | + | 10799:5955-5974 | MS.gene44410:intergenic | 30.0% | |
| TTAATGTTAGACTGTTGTGT+TGG | + | 10799:4638-4657 | MS.gene44410:intergenic | 30.0% | |
| TTGCTATAGTAGAACAGTAA+TGG | + | 10799:7474-7493 | MS.gene44410:intergenic | 30.0% | |
| TTGTTCCAACAGAAAATCTT+AGG | - | 10799:5385-5404 | MS.gene44410:intron | 30.0% | |
| ! | AAACCGTTTTCACCATTTTA+AGG | + | 10799:2198-2217 | MS.gene44410:intergenic | 30.0% |
| ! | ACATGTATATCTCAGCATTT+TGG | + | 10799:5019-5038 | MS.gene44410:intergenic | 30.0% |
| ! | ACCAAATAAAAAAAAGCGCA+AGG | - | 10799:2830-2849 | MS.gene44410:intron | 30.0% |
| ! | ATATACTTTTGACATGTAGC+TGG | - | 10799:1892-1911 | MS.gene44410:intron | 30.0% |
| ! | ATTAGGGTTGTTCTTTTTAG+AGG | + | 10799:3168-3187 | MS.gene44410:intergenic | 30.0% |
| ! | CAAGCACTCATAATTTTTAC+AGG | - | 10799:1992-2011 | MS.gene44410:intron | 30.0% |
| ! | CTAATACTTTTAAGCTACAC+AGG | - | 10799:3783-3802 | MS.gene44410:intron | 30.0% |
| ! | CTGATTGTAATTTGGGATTT+AGG | - | 10799:3290-3309 | MS.gene44410:intron | 30.0% |
| ! | GCTTTTGATGAAAATAGTAG+AGG | + | 10799:5748-5767 | MS.gene44410:intergenic | 30.0% |
| ! | TTAGGGTTGTTCTTTTTAGA+GGG | + | 10799:3167-3186 | MS.gene44410:intergenic | 30.0% |
| !! | ATATATTCAGCTTTGAAGCA+TGG | + | 10799:5920-5939 | MS.gene44410:intergenic | 30.0% |
| !! | ATTCAAGTTTGTTGATCCTT+GGG | + | 10799:8086-8105 | MS.gene44410:intergenic | 30.0% |
| !! | ATTGTTTGAAAGCGTTATGT+TGG | - | 10799:4286-4305 | MS.gene44410:intron | 30.0% |
| !! | CTGTGTAGCTTAAAAGTATT+AGG | + | 10799:3785-3804 | MS.gene44410:intergenic | 30.0% |
| !! | GTTTTCACCATTTTAAGGAT+GGG | + | 10799:2193-2212 | MS.gene44410:intergenic | 30.0% |
| !! | TATATTCAGCTTTGAAGCAT+GGG | + | 10799:5919-5938 | MS.gene44410:intergenic | 30.0% |
| !!! | ACCTTTTACTTTTAAAGCGA+AGG | + | 10799:4477-4496 | MS.gene44410:intergenic | 30.0% |
| !!! | AGAATGGATTGCATTTTCAT+AGG | - | 10799:2095-2114 | MS.gene44410:CDS | 30.0% |
| !!! | CTGCAGTTACACTATTTTTT+GGG | + | 10799:2862-2881 | MS.gene44410:intergenic | 30.0% |
| !!! | GAATGGATTGCATTTTCATA+GGG | - | 10799:2096-2115 | MS.gene44410:CDS | 30.0% |
| !!! | GAGTACAAGGTTTTTTTTCT+TGG | + | 10799:2905-2924 | MS.gene44410:intergenic | 30.0% |
| !!! | GTTACACTATTTTTTGGGTT+TGG | + | 10799:2857-2876 | MS.gene44410:intergenic | 30.0% |
| !!! | TCATGTCTCTCTCATTTTTT+TGG | + | 10799:4890-4909 | MS.gene44410:intergenic | 30.0% |
| !!! | TCCTTGCGCTTTTTTTTATT+TGG | + | 10799:2834-2853 | MS.gene44410:intergenic | 30.0% |
| !!! | TGTTGATTTTCTTGGAAACT+TGG | - | 10799:7370-7389 | MS.gene44410:intron | 30.0% |
| !!! | TTTTTTTTGCCTTTTCCTTC+TGG | - | 10799:4754-4773 | MS.gene44410:intron | 30.0% |
| AAAATTAACTGAGTGCCACA+TGG | + | 10799:2741-2760 | MS.gene44410:intergenic | 35.0% | |
| AAACACACAACAAAGCTAAG+TGG | + | 10799:7548-7567 | MS.gene44410:intergenic | 35.0% | |
| AACTCAATTGATCAGTGTTG+TGG | + | 10799:2039-2058 | MS.gene44410:intergenic | 35.0% | |
| AGCAAAACCCATCCTTAAAA+TGG | - | 10799:2183-2202 | MS.gene44410:CDS | 35.0% | |
| ATATATGTTTGATGAGCAGC+TGG | - | 10799:1919-1938 | MS.gene44410:intron | 35.0% | |
| ATATCACTGTGAACTGTCAT+TGG | - | 10799:5164-5183 | MS.gene44410:intron | 35.0% | |
| ATGAATCATGAATGTAAGGC+GGG | - | 10799:6187-6206 | MS.gene44410:CDS | 35.0% | |
| CAACACTGAGATTGATTGAA+TGG | - | 10799:5508-5527 | MS.gene44410:intron | 35.0% | |
| CAATCAGAAACTGAATGGAA+TGG | + | 10799:3277-3296 | MS.gene44410:intergenic | 35.0% | |
| CAATTCAGATCCTCGAAAAT+GGG | + | 10799:4134-4153 | MS.gene44410:intergenic | 35.0% | |
| CATCACAAATAGATGTCTAC+AGG | + | 10799:7497-7516 | MS.gene44410:intergenic | 35.0% | |
| CCAAAAAATAGTGTAACTGC+AGG | - | 10799:2860-2879 | MS.gene44410:intron | 35.0% | |
| CTAACAGATAATTGGGACTT+TGG | + | 10799:6798-6817 | MS.gene44410:intergenic | 35.0% | |
| GAAGATTGCTTACATATCTG+AGG | - | 10799:3559-3578 | MS.gene44410:intron | 35.0% | |
| GCAAGTGTCTAACAGATAAT+TGG | + | 10799:6806-6825 | MS.gene44410:intergenic | 35.0% | |
| GCAATCCGAATTACATAATC+CGG | - | 10799:2247-2266 | MS.gene44410:CDS | 35.0% | |
| GCTACGTTTAATTCTAGTGA+AGG | + | 10799:4583-4602 | MS.gene44410:intergenic | 35.0% | |
| GTATCTTTGTCCAAATCCTT+CGG | + | 10799:3746-3765 | MS.gene44410:intergenic | 35.0% | |
| TATCTATGATGCATAGGTAC+CGG | - | 10799:5558-5577 | MS.gene44410:intron | 35.0% | |
| TCACAGATTATTGTGATGCT+GGG | - | 10799:6565-6584 | MS.gene44410:CDS | 35.0% | |
| TCACATCTGATATAAACTGG+GGG | + | 10799:6860-6879 | MS.gene44410:intergenic | 35.0% | |
| TCCAACACATTCATTGTGTT+GGG | - | 10799:4379-4398 | MS.gene44410:intron | 35.0% | |
| TTCACAGATTATTGTGATGC+TGG | - | 10799:6564-6583 | MS.gene44410:CDS | 35.0% | |
| TTGAAACCTGACACTATAGA+AGG | - | 10799:6714-6733 | MS.gene44410:intron | 35.0% | |
| TTGTATGATACGTTGAACTC+AGG | + | 10799:6759-6778 | MS.gene44410:intergenic | 35.0% | |
| TTGTGGATAGACATGATTTG+AGG | - | 10799:4040-4059 | MS.gene44410:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | + | 10799:2521-2540 | MS.gene44410:intergenic | 35.0% | |
| TTTGCAGTACAGTCAATTGA+AGG | + | 10799:7834-7853 | MS.gene44410:intergenic | 35.0% | |
| ! | AACTCAATAGGGGTTTTCTT+TGG | + | 10799:2394-2413 | MS.gene44410:intergenic | 35.0% |
| ! | ACATTCTTGACGACACTTTT+TGG | + | 10799:3397-3416 | MS.gene44410:intergenic | 35.0% |
| ! | ACTCAATAGGGGTTTTCTTT+GGG | + | 10799:2393-2412 | MS.gene44410:intergenic | 35.0% |
| ! | ACTGCTGTTTATTTCCTCTA+TGG | - | 10799:7234-7253 | MS.gene44410:intron | 35.0% |
| ! | ATTTTCTGTTGGAACAAAGC+CGG | + | 10799:5382-5401 | MS.gene44410:intergenic | 35.0% |
| ! | CATTCTAGAGGATGATTTGA+AGG | - | 10799:4171-4190 | MS.gene44410:intron | 35.0% |
| ! | CGAAACCTAAGATTTTCTGT+TGG | + | 10799:5393-5412 | MS.gene44410:intergenic | 35.0% |
| ! | GTATATCTCAGCATTTTGGA+TGG | + | 10799:5015-5034 | MS.gene44410:intergenic | 35.0% |
| ! | TTCACCTTCTCCTTTTATTC+AGG | - | 10799:6683-6702 | MS.gene44410:intron | 35.0% |
| !! | ATTCATTAACTTGTGCCTTG+AGG | - | 10799:2644-2663 | MS.gene44410:intron | 35.0% |
| !! | CATTCTTGACGACACTTTTT+GGG | + | 10799:3396-3415 | MS.gene44410:intergenic | 35.0% |
| !! | CGTTTTCACCATTTTAAGGA+TGG | + | 10799:2194-2213 | MS.gene44410:intergenic | 35.0% |
| !! | GAAATTTTGACCCATTTTCG+AGG | - | 10799:4121-4140 | MS.gene44410:intron | 35.0% |
| !! | GATTCAAGTTTGTTGATCCT+TGG | + | 10799:8087-8106 | MS.gene44410:intergenic | 35.0% |
| !! | GCCTTCGCTTTAAAAGTAAA+AGG | - | 10799:4473-4492 | MS.gene44410:intron | 35.0% |
| !! | GTAATGTTGGTGATCTTTCA+GGG | - | 10799:4955-4974 | MS.gene44410:CDS | 35.0% |
| !! | TAATGTTGGTGATCTTTCAG+GGG | - | 10799:4956-4975 | MS.gene44410:CDS | 35.0% |
| !! | TTCATTAACTTGTGCCTTGA+GGG | - | 10799:2645-2664 | MS.gene44410:intron | 35.0% |
| !! | TTCTTTTTAGAGGGATGGAA+AGG | + | 10799:3158-3177 | MS.gene44410:intergenic | 35.0% |
| !!! | AACTGTCATTGGTTTTTGTC+GGG | - | 10799:5175-5194 | MS.gene44410:intron | 35.0% |
| !!! | CCTGCAGTTACACTATTTTT+TGG | + | 10799:2863-2882 | MS.gene44410:intergenic | 35.0% |
| !!! | GAACTGTCATTGGTTTTTGT+CGG | - | 10799:5174-5193 | MS.gene44410:intron | 35.0% |
| !!! | GTATTTTTTTTGGTAGTGGC+CGG | - | 10799:2929-2948 | MS.gene44410:intron | 35.0% |
| AAAATTTCCTGCCAATCAGG+CGG | + | 10799:4109-4128 | MS.gene44410:intergenic | 40.0% | |
| AAACATGATTAGAGGCCAGA+AGG | + | 10799:4772-4791 | MS.gene44410:intergenic | 40.0% | |
| AAACCTGACACTATAGAAGG+TGG | - | 10799:6717-6736 | MS.gene44410:intron | 40.0% | |
| AAATATGCCCATTTGCAGTC+CGG | + | 10799:2269-2288 | MS.gene44410:intergenic | 40.0% | |
| AACAAACCGGCCTGAATAAA+AGG | + | 10799:6696-6715 | MS.gene44410:intergenic | 40.0% | |
| AAGGTGCACAAGTAATCTCA+AGG | + | 10799:7027-7046 | MS.gene44410:intergenic | 40.0% | |
| AATAGAGAATGGGTCGTTTG+AGG | + | 10799:3209-3228 | MS.gene44410:intergenic | 40.0% | |
| AATGGGTCGTTTGAGGAAAT+GGG | + | 10799:3202-3221 | MS.gene44410:intergenic | 40.0% | |
| AATTATGAGTGCTTGAGCAG+TGG | + | 10799:1987-2006 | MS.gene44410:intergenic | 40.0% | |
| AATTATGTTGTGCTCTCTGG+TGG | - | 10799:7978-7997 | MS.gene44410:CDS | 40.0% | |
| ACATAATCCGGACTGCAAAT+GGG | - | 10799:2259-2278 | MS.gene44410:CDS | 40.0% | |
| ACATTCCAAAAGCTGTGCAA+GGG | - | 10799:4844-4863 | MS.gene44410:CDS | 40.0% | |
| ACCCAACACAATGAATGTGT+TGG | + | 10799:4383-4402 | MS.gene44410:intergenic | 40.0% | |
| ACTACACATGGCATATCTCT+AGG | + | 10799:4435-4454 | MS.gene44410:intergenic | 40.0% | |
| AGAAAATCTTAGGTTTCGGG+AGG | - | 10799:5395-5414 | MS.gene44410:intron | 40.0% | |
| AGAGGGATGGAAAGGAATTT+AGG | + | 10799:3150-3169 | MS.gene44410:intergenic | 40.0% | |
| AGCATAAGTTTGAGCTTCCT+CGG | + | 10799:6470-6489 | MS.gene44410:intergenic | 40.0% | |
| AGTGTCAGGTTTCAACAAAC+CGG | + | 10799:6709-6728 | MS.gene44410:intergenic | 40.0% | |
| ATCTCAAGTCTCAACCATAG+AGG | + | 10799:7251-7270 | MS.gene44410:intergenic | 40.0% | |
| ATGAGAGAGACATGAAGGAA+AGG | - | 10799:4895-4914 | MS.gene44410:CDS | 40.0% | |
| ATTAGGACCGTATCTATGAG+TGG | + | 10799:3768-3787 | MS.gene44410:intergenic | 40.0% | |
| ATTATGAGTGCTTGAGCAGT+GGG | + | 10799:1986-2005 | MS.gene44410:intergenic | 40.0% | |
| ATTCCTTCTCTGACTGAGAA+AGG | + | 10799:5345-5364 | MS.gene44410:intergenic | 40.0% | |
| CAAACGACCCATTCTCTATT+CGG | - | 10799:3209-3228 | MS.gene44410:CDS | 40.0% | |
| CAACACAATGAATGTGTTGG+AGG | + | 10799:4380-4399 | MS.gene44410:intergenic | 40.0% | |
| CAAGAGGTTCAGAATCTTTC+TGG | - | 10799:6912-6931 | MS.gene44410:intron | 40.0% | |
| CAGAAAGATTCTGAACCTCT+TGG | + | 10799:6914-6933 | MS.gene44410:intergenic | 40.0% | |
| CCAAAACTCAAGGCAATTTC+AGG | - | 10799:6512-6531 | MS.gene44410:CDS | 40.0% | |
| CCAAATTATCAACTTGCCGA+AGG | - | 10799:3727-3746 | MS.gene44410:intron | 40.0% | |
| CCTAGATACAACATCAGAGA+AGG | + | 10799:6423-6442 | MS.gene44410:intergenic | 40.0% | |
| CCTTCTCTGATGTTGTATCT+AGG | - | 10799:6420-6439 | MS.gene44410:intron | 40.0% | |
| CTCCAACACATTCATTGTGT+TGG | - | 10799:4378-4397 | MS.gene44410:intron | 40.0% | |
| CTGAAAGAGCTAAATTACGC+TGG | + | 10799:7119-7138 | MS.gene44410:intergenic | 40.0% | |
| CTGTTTCACATCCAGATAAC+TGG | + | 10799:5054-5073 | MS.gene44410:intergenic | 40.0% | |
| GAAATCGTGCTCAACGATAA+AGG | + | 10799:7763-7782 | MS.gene44410:intergenic | 40.0% | |
| GAATACCAGCATACGAATGA+AGG | + | 10799:6614-6633 | MS.gene44410:intergenic | 40.0% | |
| GAGGAATTGTGTATTGGATG+CGG | - | 10799:3578-3597 | MS.gene44410:intron | 40.0% | |
| GAGGGATGGAAAGGAATTTA+GGG | + | 10799:3149-3168 | MS.gene44410:intergenic | 40.0% | |
| GCAATTCAGATCCTCGAAAA+TGG | + | 10799:4135-4154 | MS.gene44410:intergenic | 40.0% | |
| GCAGTCCGGATTATGTAATT+CGG | + | 10799:2255-2274 | MS.gene44410:intergenic | 40.0% | |
| GGAAAATTGAAGCCCAACTT+GGG | - | 10799:3979-3998 | MS.gene44410:intron | 40.0% | |
| GGAGGTTTCTCTTACTTTCA+AGG | - | 10799:5413-5432 | MS.gene44410:intron | 40.0% | |
| GTCAAAATTTCCTGCCAATC+AGG | + | 10799:4112-4131 | MS.gene44410:intergenic | 40.0% | |
| GTTATCTGGATGTGAAACAG+AGG | - | 10799:5054-5073 | MS.gene44410:CDS | 40.0% | |
| GTTATGCCTTTGTCTTGGAA+AGG | - | 10799:6956-6975 | MS.gene44410:intron | 40.0% | |
| GTTTCTTAACATGTGCCCTA+AGG | + | 10799:2522-2541 | MS.gene44410:intergenic | 40.0% | |
| TACATAATCCGGACTGCAAA+TGG | - | 10799:2258-2277 | MS.gene44410:CDS | 40.0% | |
| TAGACGGGAAAGAAAAGACA+GGG | + | 10799:7064-7083 | MS.gene44410:intergenic | 40.0% | |
| TAGAGAAGCCAAATCTGTGT+TGG | - | 10799:7287-7306 | MS.gene44410:intron | 40.0% | |
| TAGGGGTCATATTTCACCAA+TGG | + | 10799:2451-2470 | MS.gene44410:intergenic | 40.0% | |
| TATCAACTTGCCGAAGGATT+TGG | - | 10799:3733-3752 | MS.gene44410:intron | 40.0% | |
| TCATTGTGTTGGGTGTGAAA+GGG | - | 10799:4389-4408 | MS.gene44410:intron | 40.0% | |
| TCGGAATCAAGATATGCACT+TGG | + | 10799:7681-7700 | MS.gene44410:intergenic | 40.0% | |
| TCTATCAGATAGATGTCTGC+AGG | + | 10799:7654-7673 | MS.gene44410:intergenic | 40.0% | |
| TGATGAACCTTCCAGTTATC+TGG | - | 10799:5040-5059 | MS.gene44410:CDS | 40.0% | |
| TGGAAAATTGAAGCCCAACT+TGG | - | 10799:3978-3997 | MS.gene44410:intron | 40.0% | |
| TGGTTGGGACAAATGGAATT+GGG | - | 10799:3929-3948 | MS.gene44410:intron | 40.0% | |
| TTACTTCACTCGCATTCTAG+AGG | - | 10799:4159-4178 | MS.gene44410:intron | 40.0% | |
| TTCACATCCAGATAACTGGA+AGG | + | 10799:5050-5069 | MS.gene44410:intergenic | 40.0% | |
| TTCAGGCTTCATGTAGTTGA+AGG | - | 10799:6529-6548 | MS.gene44410:CDS | 40.0% | |
| TTCATTGTGTTGGGTGTGAA+AGG | - | 10799:4388-4407 | MS.gene44410:intron | 40.0% | |
| TTGCTGCAAAAGTCATCAAG+AGG | - | 10799:7712-7731 | MS.gene44410:intron | 40.0% | |
| TTGGTGAATGCTAGAACCAT+TGG | - | 10799:2432-2451 | MS.gene44410:intron | 40.0% | |
| TTGGTTGGGACAAATGGAAT+TGG | - | 10799:3928-3947 | MS.gene44410:intron | 40.0% | |
| TTTGAGGAAATGGGAGAGTT+GGG | + | 10799:3193-3212 | MS.gene44410:intergenic | 40.0% | |
| TTTGGTTATTGCGTCGTAGT+TGG | + | 10799:5817-5836 | MS.gene44410:intergenic | 40.0% | |
| ! | AAGGTCTGAGGTTCAAATTC+CGG | + | 10799:2951-2970 | MS.gene44410:intergenic | 40.0% |
| ! | AGATTTGGCTTCTCTAGTGT+GGG | + | 10799:7283-7302 | MS.gene44410:intergenic | 40.0% |
| ! | CCTGAAATTGCCTTGAGTTT+TGG | + | 10799:6515-6534 | MS.gene44410:intergenic | 40.0% |
| ! | GACTTTGGGCTAATTTTCTG+AGG | + | 10799:6783-6802 | MS.gene44410:intergenic | 40.0% |
| ! | TGACGTTGAAGCAAGCTTTT+TGG | - | 10799:7515-7534 | MS.gene44410:intron | 40.0% |
| ! | TGCTGTTTATATGGCAAACC+TGG | - | 10799:5297-5316 | MS.gene44410:intron | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | 10799:2662-2681 | MS.gene44410:intergenic | 40.0% |
| !! | AATGTTGGTGATCTTTCAGG+GGG | - | 10799:4957-4976 | MS.gene44410:CDS | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | 10799:2504-2523 | MS.gene44410:intron | 40.0% |
| !! | ATGGTTCTAGCATTCACCAA+TGG | + | 10799:2432-2451 | MS.gene44410:intergenic | 40.0% |
| !! | ATTGCCTTGAGTTTTGGTCA+TGG | + | 10799:6509-6528 | MS.gene44410:intergenic | 40.0% |
| !! | CAAATCTGTGTTGGTGATGT+CGG | - | 10799:7296-7315 | MS.gene44410:intron | 40.0% |
| !! | CCTTCGGCAAGTTGATAATT+TGG | + | 10799:3730-3749 | MS.gene44410:intergenic | 40.0% |
| !! | CGTAATGTTGGTGATCTTTC+AGG | - | 10799:4954-4973 | MS.gene44410:CDS | 40.0% |
| !! | CTTGAGTTTTGGTCATGGTT+GGG | + | 10799:6504-6523 | MS.gene44410:intergenic | 40.0% |
| !! | GGTTGTTCTTTTTAGAGGGA+TGG | + | 10799:3163-3182 | MS.gene44410:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | 10799:2503-2522 | MS.gene44410:intron | 40.0% |
| AAAAGCTGTGCAAGGGAATG+TGG | - | 10799:4851-4870 | MS.gene44410:CDS | 45.0% | |
| AAAGCTGTGCAAGGGAATGT+GGG | - | 10799:4852-4871 | MS.gene44410:CDS | 45.0% | |
| AAGCATGGGTACTCCAAACA+TGG | + | 10799:5905-5924 | MS.gene44410:intergenic | 45.0% | |
| AAGCTACACAGGTTTGTGTG+CGG | - | 10799:3794-3813 | MS.gene44410:intron | 45.0% | |
| AAGTTGTTCGGTCATTGCTC+AGG | - | 10799:5090-5109 | MS.gene44410:CDS | 45.0% | |
| ACTGTGAAACGACCCAAGTT+GGG | + | 10799:3994-4013 | MS.gene44410:intergenic | 45.0% | |
| AGAGCTTGCCGAATAGAGAA+TGG | + | 10799:3220-3239 | MS.gene44410:intergenic | 45.0% | |
| AGGAGTGGTTACAGTTGGAA+TGG | + | 10799:1824-1843 | MS.gene44410:intergenic | 45.0% | |
| ATCCCAGTCAGCAATGATTG+TGG | + | 10799:7861-7880 | MS.gene44410:intergenic | 45.0% | |
| ATCCTTGGGCGGAAATTAGT+TGG | + | 10799:8072-8091 | MS.gene44410:intergenic | 45.0% | |
| ATGGAAGGAGTGGTTACAGT+TGG | + | 10799:1829-1848 | MS.gene44410:intergenic | 45.0% | |
| ATTGTGATGCTGGGTGAGAA+TGG | - | 10799:6574-6593 | MS.gene44410:CDS | 45.0% | |
| CAATTGAGATAAGCTCCACG+AGG | - | 10799:2995-3014 | MS.gene44410:CDS | 45.0% | |
| CACATTCCAAAAGCTGTGCA+AGG | - | 10799:4843-4862 | MS.gene44410:CDS | 45.0% | |
| CAGGGCAGACACAATAACTA+AGG | + | 10799:7046-7065 | MS.gene44410:intergenic | 45.0% | |
| CATGTAATGATTGGGCCATG+TGG | - | 10799:2723-2742 | MS.gene44410:intron | 45.0% | |
| CATTGTGTTGGGTGTGAAAG+GGG | - | 10799:4390-4409 | MS.gene44410:intron | 45.0% | |
| CCAACCATGACCAAAACTCA+AGG | - | 10799:6502-6521 | MS.gene44410:CDS | 45.0% | |
| CCACGTGGCATGTAATGATT+GGG | - | 10799:2715-2734 | MS.gene44410:intron | 45.0% | |
| CGACATCACCAACACAGATT+TGG | + | 10799:7298-7317 | MS.gene44410:intergenic | 45.0% | |
| CGTTGAGCACGATTTCATCA+TGG | - | 10799:7767-7786 | MS.gene44410:intron | 45.0% | |
| CTTCCTTTCTCAGTCAGAGA+AGG | - | 10799:5339-5358 | MS.gene44410:intron | 45.0% | |
| GAATGGGTCGTTTGAGGAAA+TGG | + | 10799:3203-3222 | MS.gene44410:intergenic | 45.0% | |
| GACAGAGAGCAAAAGAATGC+TGG | - | 10799:8114-8133 | MS.gene44410:CDS | 45.0% | |
| GAGCAATGACCGAACAACTT+GGG | + | 10799:5090-5109 | MS.gene44410:intergenic | 45.0% | |
| GAGCTTGCCGAATAGAGAAT+GGG | + | 10799:3219-3238 | MS.gene44410:intergenic | 45.0% | |
| GAGGTTCAGAATCTTTCTGG+TGG | - | 10799:6915-6934 | MS.gene44410:intron | 45.0% | |
| GATCCACCTTCTATAGTGTC+AGG | + | 10799:6723-6742 | MS.gene44410:intergenic | 45.0% | |
| GATTAGAGGCCAGAAGGAAA+AGG | + | 10799:4766-4785 | MS.gene44410:intergenic | 45.0% | |
| GGAATGTGGTCAACATACTG+AGG | + | 10799:4831-4850 | MS.gene44410:intergenic | 45.0% | |
| GTAGACGGGAAAGAAAAGAC+AGG | + | 10799:7065-7084 | MS.gene44410:intergenic | 45.0% | |
| GTTACAACACCATATGCACC+AGG | + | 10799:5318-5337 | MS.gene44410:intergenic | 45.0% | |
| GTTGCGTTATGCCTTTGTCT+TGG | - | 10799:6951-6970 | MS.gene44410:intron | 45.0% | |
| GTTTGAGGAAATGGGAGAGT+TGG | + | 10799:3194-3213 | MS.gene44410:intergenic | 45.0% | |
| TACCGGTACTTCTCCATGTT+TGG | - | 10799:5889-5908 | MS.gene44410:intron | 45.0% | |
| TACTGTGAAACGACCCAAGT+TGG | + | 10799:3995-4014 | MS.gene44410:intergenic | 45.0% | |
| TATGGCAAACCTGGTGCATA+TGG | - | 10799:5306-5325 | MS.gene44410:intron | 45.0% | |
| TCCTTGGGCGGAAATTAGTT+GGG | + | 10799:8071-8090 | MS.gene44410:intergenic | 45.0% | |
| TGAAAGCTGCCCAAGTTGTT+CGG | - | 10799:5078-5097 | MS.gene44410:CDS | 45.0% | |
| TGAGCAATGACCGAACAACT+TGG | + | 10799:5091-5110 | MS.gene44410:intergenic | 45.0% | |
| TGCAGCAACAATACGCTGTT+CGG | + | 10799:7700-7719 | MS.gene44410:intergenic | 45.0% | |
| TGGAATTTCCGCCTTCTTTG+TGG | - | 10799:4306-4325 | MS.gene44410:intron | 45.0% | |
| TGGATGCGGTATCTGTGTTA+AGG | - | 10799:3592-3611 | MS.gene44410:intron | 45.0% | |
| TGTCCACAATCATTGCTGAC+TGG | - | 10799:7855-7874 | MS.gene44410:intron | 45.0% | |
| TTAACGGCTAACTAACGGCA+AGG | - | 10799:2770-2789 | MS.gene44410:intron | 45.0% | |
| TTGAGGAAATGGGAGAGTTG+GGG | + | 10799:3192-3211 | MS.gene44410:intergenic | 45.0% | |
| TTGGTGCAGCAAAAACGTAC+AGG | + | 10799:5798-5817 | MS.gene44410:intergenic | 45.0% | |
| TTGTGATGCTGGGTGAGAAT+GGG | - | 10799:6575-6594 | MS.gene44410:CDS | 45.0% | |
| ! | AAATGAAGGTACGGGTACGT+TGG | - | 10799:5634-5653 | MS.gene44410:intron | 45.0% |
| ! | ACATTCCCTTGCACAGCTTT+TGG | + | 10799:4852-4871 | MS.gene44410:intergenic | 45.0% |
| ! | AGGGCTGTGATGTTACTTAC+CGG | + | 10799:3445-3464 | MS.gene44410:intergenic | 45.0% |
| ! | CAGATTTGGCTTCTCTAGTG+TGG | + | 10799:7284-7303 | MS.gene44410:intergenic | 45.0% |
| ! | CCTTCTCCTTTTATTCAGGC+CGG | - | 10799:6687-6706 | MS.gene44410:intron | 45.0% |
| ! | CGAGCACGATCTTAGTGTTT+TGG | - | 10799:5254-5273 | MS.gene44410:intron | 45.0% |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | 10799:5894-5913 | MS.gene44410:intergenic | 45.0% |
| ! | GGCATATCTCTAGGAAGTGT+GGG | + | 10799:4426-4445 | MS.gene44410:intergenic | 45.0% |
| ! | GTCCACAATCATTGCTGACT+GGG | - | 10799:7856-7875 | MS.gene44410:intron | 45.0% |
| ! | GTCGACTGCACTTAAGGTTT+TGG | - | 10799:3954-3973 | MS.gene44410:intron | 45.0% |
| ! | GTTTTCTTTGGGCCATTGTG+CGG | + | 10799:2382-2401 | MS.gene44410:intergenic | 45.0% |
| ! | TGGCATATCTCTAGGAAGTG+TGG | + | 10799:4427-4446 | MS.gene44410:intergenic | 45.0% |
| !! | ACTGCACTTAAGGTTTTGGC+TGG | - | 10799:3958-3977 | MS.gene44410:intron | 45.0% |
| !! | ATGATGCATAGGTACCGGTA+CGG | - | 10799:5563-5582 | MS.gene44410:intron | 45.0% |
| !! | CAAGTTTGTTGATCCTTGGG+CGG | + | 10799:8083-8102 | MS.gene44410:intergenic | 45.0% |
| !! | CCTTGAGTTTTGGTCATGGT+TGG | + | 10799:6505-6524 | MS.gene44410:intergenic | 45.0% |
| !! | CTTGGTTTGGTTGGGACAAA+TGG | - | 10799:3922-3941 | MS.gene44410:intron | 45.0% |
| !! | TAGTGTAAGGGTGCTACCTT+GGG | - | 10799:1943-1962 | MS.gene44410:intron | 45.0% |
| !! | TGAACAGTTGATGGACCAAG+AGG | - | 10799:6896-6915 | MS.gene44410:intron | 45.0% |
| !!! | CTTGCACAGCTTTTGGAATG+TGG | + | 10799:4845-4864 | MS.gene44410:intergenic | 45.0% |
| !! | AAAAAATTAACAAAAATATA+AGG | + | 10799:6053-6072 | MS.gene44410:intergenic | 5.0% |
| !! | AATTAAAAAAATAAAACAAT+AGG | + | 10799:2470-2489 | MS.gene44410:intergenic | 5.0% |
| !! | ATTAAAAAAATAAAACAATA+GGG | + | 10799:2469-2488 | MS.gene44410:intergenic | 5.0% |
| !!! | ATTTTTTATTTATTTTTTCA+CGG | + | 10799:3080-3099 | MS.gene44410:intergenic | 5.0% |
| !!! | TAATTTTAACTTTTTTTTAA+CGG | - | 10799:2754-2773 | MS.gene44410:intron | 5.0% |
| !!! | TTTTTTAATTAAAATTGTAA+GGG | - | 10799:2480-2499 | MS.gene44410:intron | 5.0% |
| !!! | TTTTTTTAATTAAAATTGTA+AGG | - | 10799:2479-2498 | MS.gene44410:intron | 5.0% |
| AAGCTGTGCAAGGGAATGTG+GGG | - | 10799:4853-4872 | MS.gene44410:CDS | 50.0% | |
| AATCAGGCGGTTCCTGCAAA+TGG | + | 10799:4096-4115 | MS.gene44410:intergenic | 50.0% | |
| AATGGGAGAGTTGGGGGATT+AGG | + | 10799:3185-3204 | MS.gene44410:intergenic | 50.0% | |
| ACCCAACTAATTTCCGCCCA+AGG | - | 10799:8067-8086 | MS.gene44410:intron | 50.0% | |
| AGATGTCTGCAGGCTGTTGT+AGG | + | 10799:7644-7663 | MS.gene44410:intergenic | 50.0% | |
| AGCTGCCTAATTGCGGCATT+TGG | - | 10799:4338-4357 | MS.gene44410:intron | 50.0% | |
| AGTTGTCCTGTCGTCAGAAC+CGG | - | 10799:3423-3442 | MS.gene44410:CDS | 50.0% | |
| ATGAGCAGCTGGCTAGTGTA+AGG | - | 10799:1930-1949 | MS.gene44410:intron | 50.0% | |
| ATGCCGCAATTAGGCAGCTA+AGG | + | 10799:4337-4356 | MS.gene44410:intergenic | 50.0% | |
| ATGGGAGAGTTGGGGGATTA+GGG | + | 10799:3184-3203 | MS.gene44410:intergenic | 50.0% | |
| ATTTGCAGGAACCGCCTGAT+TGG | - | 10799:4095-4114 | MS.gene44410:intron | 50.0% | |
| CAACCGCAATGGCAAACCTT+TGG | + | 10799:4989-5008 | MS.gene44410:intergenic | 50.0% | |
| CAATGGAGTACAAGTCCTCG+TGG | + | 10799:3013-3032 | MS.gene44410:intergenic | 50.0% | |
| CCCAATCATTACATGCCACG+TGG | + | 10799:2718-2737 | MS.gene44410:intergenic | 50.0% | |
| CCGGCCTGAATAAAAGGAGA+AGG | + | 10799:6690-6709 | MS.gene44410:intergenic | 50.0% | |
| CGTCGCAGTTGTCAACATGT+CGG | - | 10799:3326-3345 | MS.gene44410:CDS | 50.0% | |
| CTAAGGGCGAACCACAAAGA+AGG | + | 10799:4320-4339 | MS.gene44410:intergenic | 50.0% | |
| GAATGTAAGGCGGGTCTACA+GGG | - | 10799:6196-6215 | MS.gene44410:CDS | 50.0% | |
| GACGACCTTCATTCGTATGC+TGG | - | 10799:6606-6625 | MS.gene44410:intron | 50.0% | |
| GCAACCCAAATGCCGCAATT+AGG | + | 10799:4346-4365 | MS.gene44410:intergenic | 50.0% | |
| GCATCTGTCGTTGCTAACGA+TGG | + | 10799:3370-3389 | MS.gene44410:intergenic | 50.0% | |
| GCCACGTGGCATGTAATGAT+TGG | - | 10799:2714-2733 | MS.gene44410:intron | 50.0% | |
| GCTCCAAAGGTTTGCCATTG+CGG | - | 10799:4983-5002 | MS.gene44410:CDS | 50.0% | |
| GCTGCCTAATTGCGGCATTT+GGG | - | 10799:4339-4358 | MS.gene44410:intron | 50.0% | |
| GGTTACAGTTGGAATGGCAG+TGG | + | 10799:1818-1837 | MS.gene44410:intergenic | 50.0% | |
| TGAATGTAAGGCGGGTCTAC+AGG | - | 10799:6195-6214 | MS.gene44410:CDS | 50.0% | |
| TGAGCAGCTGGCTAGTGTAA+GGG | - | 10799:1931-1950 | MS.gene44410:intron | 50.0% | |
| TGAGGAAATGGGAGAGTTGG+GGG | + | 10799:3191-3210 | MS.gene44410:intergenic | 50.0% | |
| TGCCGCAATTAGGCAGCTAA+GGG | + | 10799:4336-4355 | MS.gene44410:intergenic | 50.0% | |
| TGGGAAGTCGACTGCACTTA+AGG | - | 10799:3948-3967 | MS.gene44410:intron | 50.0% | |
| TGTGTTGGAGGCTGCAATGA+AGG | + | 10799:4368-4387 | MS.gene44410:intergenic | 50.0% | |
| TTGGATGGCAACAACCGCAA+TGG | + | 10799:5000-5019 | MS.gene44410:intergenic | 50.0% | |
| ! | TTCAGGTTTGCTCTTGCCCA+AGG | + | 10799:1962-1981 | MS.gene44410:intergenic | 50.0% |
| !! | ACATGGAGAAGTACCGGTAC+CGG | + | 10799:5888-5907 | MS.gene44410:intergenic | 50.0% |
| !! | CTAGTGTAAGGGTGCTACCT+TGG | - | 10799:1942-1961 | MS.gene44410:intron | 50.0% |
| !! | GGCAAGTGCTTGGTTTGGTT+GGG | - | 10799:3914-3933 | MS.gene44410:intron | 50.0% |
| !! | TACTTACCGGTTCTGACGAC+AGG | + | 10799:3432-3451 | MS.gene44410:intergenic | 50.0% |
| !! | TCTTTTTGCTATGCGCCACG+TGG | - | 10799:2700-2719 | MS.gene44410:intron | 50.0% |
| ACAGGTACCCGTACCCATAC+CGG | + | 10799:5592-5611 | MS.gene44410:intergenic | 55.0% | |
| ACCAAACCAAGCACTTGCCC+CGG | + | 10799:3913-3932 | MS.gene44410:intergenic | 55.0% | |
| ACGAGTACCATACGCGTACC+CGG | - | 10799:5866-5885 | MS.gene44410:intron | 55.0% | |
| AGGGCGAACCACAAAGAAGG+CGG | + | 10799:4317-4336 | MS.gene44410:intergenic | 55.0% | |
| AGGGTGCGCGAGAAATCAAC+AGG | - | 10799:2300-2319 | MS.gene44410:intron | 55.0% | |
| ATGCTGGGTGAGAATGGGAC+AGG | - | 10799:6580-6599 | MS.gene44410:CDS | 55.0% | |
| CCATTGTGCGGCTTAGCTGT+GGG | + | 10799:2370-2389 | MS.gene44410:intergenic | 55.0% | |
| CGCCCTTAGCTGCCTAATTG+CGG | - | 10799:4331-4350 | MS.gene44410:intron | 55.0% | |
| CTAGGTTGCAGAGACTCCAC+AGG | - | 10799:6438-6457 | MS.gene44410:intron | 55.0% | |
| GCGCGAGAAATCAACAGGGT+GGG | - | 10799:2305-2324 | MS.gene44410:intron | 55.0% | |
| GGGGGTGAGTGTATGCATCA+CGG | + | 10799:6842-6861 | MS.gene44410:intergenic | 55.0% | |
| GGGTGCGCGAGAAATCAACA+GGG | - | 10799:2301-2320 | MS.gene44410:intron | 55.0% | |
| GGTCATTGCTCAGGCCCAAT+AGG | - | 10799:5099-5118 | MS.gene44410:CDS | 55.0% | |
| GTGCTTGAGCAGTGGGATTC+AGG | + | 10799:1979-1998 | MS.gene44410:intergenic | 55.0% | |
| TACGGTACCCGGTATGGGTA+CGG | - | 10799:5581-5600 | MS.gene44410:intron | 55.0% | |
| TGCGCGAGAAATCAACAGGG+TGG | - | 10799:2304-2323 | MS.gene44410:intron | 55.0% | |
| TGTGTTGGGTGTGAAAGGGG+TGG | - | 10799:4393-4412 | MS.gene44410:intron | 55.0% | |
| TTTCAGGGGGTGAGCTCCAA+AGG | - | 10799:4970-4989 | MS.gene44410:CDS | 55.0% | |
| !! | ATAGGTACCGGTACGGTACC+CGG | - | 10799:5570-5589 | MS.gene44410:intron | 55.0% |
| !! | CATGGAGAAGTACCGGTACC+GGG | + | 10799:5887-5906 | MS.gene44410:intergenic | 55.0% |
| !! | GGGCAAGTGCTTGGTTTGGT+TGG | - | 10799:3913-3932 | MS.gene44410:intron | 55.0% |
| ACCATACGCGTACCCGGTAC+CGG | - | 10799:5872-5891 | MS.gene44410:intron | 60.0% | |
| ACCGGTACGGTACCCGGTAT+GGG | - | 10799:5576-5595 | MS.gene44410:intron | 60.0% | |
| ACGGTACCCGGTATGGGTAC+GGG | - | 10799:5582-5601 | MS.gene44410:intron | 60.0% | |
| CAGGTACCCGTACCCATACC+GGG | + | 10799:5591-5610 | MS.gene44410:intergenic | 60.0% | |
| CCCACAGCTAAGCCGCACAA+TGG | - | 10799:2367-2386 | MS.gene44410:intron | 60.0% | |
| GACTCCACAGGAAACTGCCG+AGG | - | 10799:6450-6469 | MS.gene44410:intron | 60.0% | |
| GCCATTGTGCGGCTTAGCTG+TGG | + | 10799:2371-2390 | MS.gene44410:intergenic | 60.0% | |
| GCTTCCTCGGCAGTTTCCTG+TGG | + | 10799:6457-6476 | MS.gene44410:intergenic | 60.0% | |
| GGCGGGTCTACAGGGTAGTA+AGG | - | 10799:6204-6223 | MS.gene44410:CDS | 60.0% | |
| TACCGGTACGGTACCCGGTA+TGG | - | 10799:5575-5594 | MS.gene44410:intron | 60.0% | |
| TGTGCAAGGGAATGTGGGGC+AGG | - | 10799:4857-4876 | MS.gene44410:CDS | 60.0% | |
| ! | ACCCATACCGGGTACCGTAC+CGG | + | 10799:5580-5599 | MS.gene44410:intergenic | 60.0% |
| !! | ATTGCAGGTTGCCGGTTCCC+AGG | - | 10799:3887-3906 | MS.gene44410:intron | 60.0% |
| GCAGGAACCGCCTGATTGGC+AGG | - | 10799:4099-4118 | MS.gene44410:intron | 65.0% | |
| GCCGGGGCAAGTGCTTGGTT+TGG | - | 10799:3909-3928 | MS.gene44410:intron | 65.0% | |
| ! | ACCGGTACCGGGTACGCGTA+TGG | + | 10799:5876-5895 | MS.gene44410:intergenic | 65.0% |
| ACCAAGCACTTGCCCCGGCC+TGG | + | 10799:3908-3927 | MS.gene44410:intergenic | 70.0% | |
| ACTTGCCCCGGCCTGGGAAC+CGG | + | 10799:3901-3920 | MS.gene44410:intergenic | 70.0% | |
| CCAAGCACTTGCCCCGGCCT+GGG | + | 10799:3907-3926 | MS.gene44410:intergenic | 70.0% | |
| !! | AGGTTGCCGGTTCCCAGGCC+GGG | - | 10799:3892-3911 | MS.gene44410:intron | 70.0% |
| !! | CAGGTTGCCGGTTCCCAGGC+CGG | - | 10799:3891-3910 | MS.gene44410:intron | 70.0% |
| CCCAGGCCGGGGCAAGTGCT+TGG | - | 10799:3904-3923 | MS.gene44410:intron | 75.0% | |
| !! | GGTTGCCGGTTCCCAGGCCG+GGG | - | 10799:3893-3912 | MS.gene44410:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10799 | gene | 1778 | 8161 | 1778 | ID=MS.gene44410 |
| 10799 | mRNA | 1778 | 8161 | 1778 | ID=MS.gene44410.t1;Parent=MS.gene44410 |
| 10799 | exon | 8108 | 8161 | 8108 | ID=MS.gene44410.t1.exon1;Parent=MS.gene44410.t1 |
| 10799 | CDS | 8108 | 8161 | 8108 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 7926 | 8028 | 7926 | ID=MS.gene44410.t1.exon2;Parent=MS.gene44410.t1 |
| 10799 | CDS | 7926 | 8028 | 7926 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 6495 | 6605 | 6495 | ID=MS.gene44410.t1.exon3;Parent=MS.gene44410.t1 |
| 10799 | CDS | 6495 | 6605 | 6495 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 6326 | 6411 | 6326 | ID=MS.gene44410.t1.exon4;Parent=MS.gene44410.t1 |
| 10799 | CDS | 6326 | 6411 | 6326 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 6135 | 6232 | 6135 | ID=MS.gene44410.t1.exon5;Parent=MS.gene44410.t1 |
| 10799 | CDS | 6135 | 6232 | 6135 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 5928 | 6045 | 5928 | ID=MS.gene44410.t1.exon6;Parent=MS.gene44410.t1 |
| 10799 | CDS | 5928 | 6045 | 5928 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 5747 | 5836 | 5747 | ID=MS.gene44410.t1.exon7;Parent=MS.gene44410.t1 |
| 10799 | CDS | 5747 | 5836 | 5747 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 4819 | 5123 | 4819 | ID=MS.gene44410.t1.exon8;Parent=MS.gene44410.t1 |
| 10799 | CDS | 4819 | 5123 | 4819 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 4505 | 4700 | 4505 | ID=MS.gene44410.t1.exon9;Parent=MS.gene44410.t1 |
| 10799 | CDS | 4505 | 4700 | 4505 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 3312 | 3497 | 3312 | ID=MS.gene44410.t1.exon10;Parent=MS.gene44410.t1 |
| 10799 | CDS | 3312 | 3497 | 3312 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 2962 | 3234 | 2962 | ID=MS.gene44410.t1.exon11;Parent=MS.gene44410.t1 |
| 10799 | CDS | 2962 | 3234 | 2962 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 2043 | 2288 | 2043 | ID=MS.gene44410.t1.exon12;Parent=MS.gene44410.t1 |
| 10799 | CDS | 2043 | 2288 | 2043 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| 10799 | exon | 1778 | 1897 | 1778 | ID=MS.gene44410.t1.exon13;Parent=MS.gene44410.t1 |
| 10799 | CDS | 1778 | 1897 | 1778 | ID=cds.MS.gene44410.t1;Parent=MS.gene44410.t1 |
| Gene Sequence |
| Protein sequence |
