Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45706.t1 | XP_013456384.1 | 91.8 | 427 | 35 | 0 | 1 | 427 | 12 | 438 | 4.50E-224 | 786.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45706.t1 | Q9LN62 | 68.6 | 427 | 129 | 4 | 2 | 426 | 5 | 428 | 2.5e-162 | 573.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45706.t1 | A0A072UX35 | 91.8 | 427 | 35 | 0 | 1 | 427 | 12 | 438 | 3.3e-224 | 786.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051996 | MS.gene45706 | 0.833776 | 4.39E-56 | -1.69E-46 |
| MS.gene054742 | MS.gene45706 | 0.81663 | 5.01E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene45706 | 0.805383 | 1.37E-49 | -1.69E-46 |
| MS.gene056680 | MS.gene45706 | 0.911001 | 9.96E-83 | -1.69E-46 |
| MS.gene056920 | MS.gene45706 | 0.807122 | 5.90E-50 | -1.69E-46 |
| MS.gene059891 | MS.gene45706 | 0.821799 | 3.33E-53 | -1.69E-46 |
| MS.gene059892 | MS.gene45706 | 0.800441 | 1.44E-48 | -1.69E-46 |
| MS.gene060087 | MS.gene45706 | 0.816857 | 4.45E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45706.t1 | MTR_4g069300 | 91.803 | 427 | 35 | 0 | 1 | 427 | 12 | 438 | 0.0 | 803 |
| MS.gene45706.t1 | MTR_4g069260 | 84.543 | 427 | 65 | 1 | 1 | 427 | 12 | 437 | 0.0 | 763 |
| MS.gene45706.t1 | MTR_4g069350 | 85.176 | 425 | 56 | 1 | 1 | 425 | 12 | 429 | 0.0 | 741 |
| MS.gene45706.t1 | MTR_4g069430 | 82.824 | 425 | 57 | 2 | 1 | 425 | 12 | 420 | 0.0 | 705 |
| MS.gene45706.t1 | MTR_4g069420 | 80.706 | 425 | 73 | 1 | 1 | 425 | 12 | 427 | 0.0 | 691 |
| MS.gene45706.t1 | MTR_4g069390 | 84.034 | 357 | 52 | 1 | 69 | 425 | 1 | 352 | 0.0 | 625 |
| MS.gene45706.t1 | MTR_1g022025 | 69.104 | 424 | 124 | 2 | 2 | 425 | 11 | 427 | 0.0 | 617 |
| MS.gene45706.t1 | MTR_4g069280 | 87.273 | 55 | 7 | 0 | 1 | 55 | 12 | 66 | 5.97e-27 | 103 |
| MS.gene45706.t1 | MTR_4g069410 | 85.455 | 55 | 8 | 0 | 1 | 55 | 12 | 66 | 4.18e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45706.t1 | AT1G19360 | 68.618 | 427 | 129 | 4 | 2 | 426 | 5 | 428 | 0.0 | 603 |
| MS.gene45706.t1 | AT1G19360 | 68.618 | 427 | 129 | 4 | 2 | 426 | 5 | 428 | 0.0 | 603 |
| MS.gene45706.t1 | AT1G75110 | 66.981 | 424 | 139 | 1 | 2 | 425 | 5 | 427 | 0.0 | 599 |
| MS.gene45706.t1 | AT1G75120 | 62.228 | 413 | 130 | 4 | 13 | 425 | 16 | 402 | 0.0 | 525 |
Find 92 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCTTCAATTGAGCTTT+TGG | 0.172013 | 4.4:+38299749 | MS.gene45706:CDS |
| AGGATATGGGTTTACAATTC+TGG | 0.249487 | 4.4:+38299705 | MS.gene45706:CDS |
| TTCATTCGCCGAAGCTTATC+AGG | 0.266822 | 4.4:-38299993 | None:intergenic |
| CACAATAACATGACAGCTTA+TGG | 0.281097 | 4.4:+38299624 | MS.gene45706:CDS |
| GGAGGGAGAGCAGCTGTCTC+TGG | 0.299812 | 4.4:+38299465 | MS.gene45706:CDS |
| GTAATCATTGGAGTTCTTAC+TGG | 0.301834 | 4.4:+38295554 | MS.gene45706:CDS |
| TAGTTCATACCACGAGGATA+TGG | 0.304296 | 4.4:+38299691 | MS.gene45706:CDS |
| AAGGCAACAACTAGATAATT+AGG | 0.329864 | 4.4:-38299351 | None:intergenic |
| TCATGCTTCTAAAAGAACTA+TGG | 0.336021 | 4.4:+38299869 | MS.gene45706:CDS |
| AGCATGAAGCCCGTCATAAC+CGG | 0.354815 | 4.4:-38299853 | None:intergenic |
| GCTTCTTGCATTAGGTAAAC+AGG | 0.362356 | 4.4:+38299131 | MS.gene45706:CDS |
| TCTAATATATTTGCCAATCT+CGG | 0.386117 | 4.4:-38299228 | None:intergenic |
| TAATTCACGTGAATAATTAC+CGG | 0.389710 | 4.4:-38299966 | None:intergenic |
| TGAGAAACAAAGAATTCATT+AGG | 0.391068 | 4.4:-38295599 | None:intergenic |
| GTTGTTGATTATTATGTCAA+TGG | 0.405758 | 4.4:+38300020 | MS.gene45706:CDS |
| TATACCGACTCTCTTGATAT+TGG | 0.413611 | 4.4:-38299328 | None:intergenic |
| AAAGAGTTCTTCATTGAAAA+CGG | 0.417137 | 4.4:-38299817 | None:intergenic |
| AACAGTAGGATTGGTTCTTA+AGG | 0.420894 | 4.4:-38299184 | None:intergenic |
| GGTTACCACTTTGAGCCATC+AGG | 0.421929 | 4.4:-38300068 | None:intergenic |
| CTAATATATTTGCCAATCTC+GGG | 0.422456 | 4.4:-38299227 | None:intergenic |
| TGAGTCTTGGGTACAGCAAT+AGG | 0.422471 | 4.4:-38295647 | None:intergenic |
| TGATCATCTATACCGTGATT+CGG | 0.426234 | 4.4:+38299578 | MS.gene45706:CDS |
| CCTTGCAAACTCCAATGTTA+AGG | 0.426563 | 4.4:+38299284 | MS.gene45706:CDS |
| ATCATTGCCGCTGTAATCAT+TGG | 0.429648 | 4.4:+38295542 | MS.gene45706:CDS |
| CATGTTAAAATCAGAATTTG+TGG | 0.440337 | 4.4:+38299008 | MS.gene45706:CDS |
| CTCAATCTCTACTGATATCA+AGG | 0.441387 | 4.4:+38295519 | MS.gene45706:CDS |
| TTGTTGATTATTATGTCAAT+GGG | 0.453648 | 4.4:+38300021 | MS.gene45706:CDS |
| TTGGTCCCATGCTTTCTCCT+TGG | 0.456387 | 4.4:-38299793 | None:intergenic |
| CTCGGGTTCACGGATTCATC+AGG | 0.461693 | 4.4:-38299210 | None:intergenic |
| AGCTCAATTGAAGGAATGGT+TGG | 0.470800 | 4.4:-38299744 | None:intergenic |
| ACAGTATCAATACCATCATC+CGG | 0.475603 | 4.4:-38299432 | None:intergenic |
| AGTTCATACCACGAGGATAT+GGG | 0.478586 | 4.4:+38299692 | MS.gene45706:CDS |
| TGAATCCGTGAACCCGAGAT+TGG | 0.481653 | 4.4:+38299215 | MS.gene45706:CDS |
| AATAGGTAGGTGACGATTTG+AGG | 0.481988 | 4.4:-38295630 | None:intergenic |
| TTAAGGAGACCCTCGAGGTC+TGG | 0.486077 | 4.4:+38299301 | MS.gene45706:CDS |
| ATCAGGAGCAACAGTAGGAT+TGG | 0.486219 | 4.4:-38299193 | None:intergenic |
| CAAAAGCTCAATTGAAGGAA+TGG | 0.491186 | 4.4:-38299748 | None:intergenic |
| GGAAAGGTTTGAGAGCATCT+TGG | 0.491288 | 4.4:-38300046 | None:intergenic |
| CCGTCCCATCCCGGTTATGA+CGG | 0.491722 | 4.4:+38299843 | MS.gene45706:CDS |
| TACAAAAGAGACCCGGATGA+TGG | 0.496519 | 4.4:+38299420 | MS.gene45706:CDS |
| TAACCTCAGTAAATTAAAAC+CGG | 0.496942 | 4.4:+38299947 | MS.gene45706:CDS |
| TATCTATGACGAACCTGTGA+TGG | 0.498138 | 4.4:+38299656 | MS.gene45706:CDS |
| CTTGATATCAGTAGAGATTG+AGG | 0.500376 | 4.4:-38295518 | None:intergenic |
| CACTTTGAGCCATCAGGGAA+AGG | 0.502373 | 4.4:-38300062 | None:intergenic |
| GAAAATGAAACCTGAGTCTT+GGG | 0.503709 | 4.4:-38295659 | None:intergenic |
| CGATCCAAAAGCTCAATTGA+AGG | 0.505035 | 4.4:-38299753 | None:intergenic |
| TCACGGTATAGATGATCAAA+AGG | 0.505121 | 4.4:-38299573 | None:intergenic |
| ATTTGCCAATCTCGGGTTCA+CGG | 0.510225 | 4.4:-38299220 | None:intergenic |
| CTTTGAAATTTCCTCGTCGA+AGG | 0.515983 | 4.4:-38299370 | None:intergenic |
| CCTTAACATTGGAGTTTGCA+AGG | 0.516596 | 4.4:-38299284 | None:intergenic |
| GAGGGAGAGCAGCTGTCTCT+GGG | 0.517475 | 4.4:+38299466 | MS.gene45706:CDS |
| CGTCCCATCCCGGTTATGAC+GGG | 0.525047 | 4.4:+38299844 | MS.gene45706:CDS |
| GGCTTTCCAAGGAGAAAGCA+TGG | 0.525521 | 4.4:+38299787 | MS.gene45706:CDS |
| TGAAAATGAAACCTGAGTCT+TGG | 0.531674 | 4.4:-38295660 | None:intergenic |
| TTGATATCAGTAGAGATTGA+GGG | 0.536003 | 4.4:-38295517 | None:intergenic |
| GTTCTTCATTGAAAACGGCT+TGG | 0.536649 | 4.4:-38299812 | None:intergenic |
| ATTACCATCCTGATAAGCTT+CGG | 0.537140 | 4.4:+38299985 | MS.gene45706:CDS |
| AAGCCCGTCATAACCGGGAT+GGG | 0.548733 | 4.4:-38299847 | None:intergenic |
| CTTAACATTGGAGTTTGCAA+GGG | 0.559512 | 4.4:-38299283 | None:intergenic |
| GCTCTCAAACCTTTCCCTGA+TGG | 0.559523 | 4.4:+38300053 | MS.gene45706:CDS |
| GTTACCACTTTGAGCCATCA+GGG | 0.562119 | 4.4:-38300067 | None:intergenic |
| CTCGAGGGTCTCCTTAACAT+TGG | 0.565730 | 4.4:-38299295 | None:intergenic |
| GTTATTGTGACCATCACTCA+TGG | 0.567499 | 4.4:-38299610 | None:intergenic |
| GCATGAAGCCCGTCATAACC+GGG | 0.579502 | 4.4:-38299852 | None:intergenic |
| CCGTCATAACCGGGATGGGA+CGG | 0.584602 | 4.4:-38299843 | None:intergenic |
| GAAGCCCGTCATAACCGGGA+TGG | 0.590516 | 4.4:-38299848 | None:intergenic |
| AGCAGAGCAAGGAAAAGACC+AGG | 0.591506 | 4.4:+38299098 | MS.gene45706:CDS |
| TATTGCTGTACCCAAGACTC+AGG | 0.595322 | 4.4:+38295649 | MS.gene45706:CDS |
| AAGGCCTTGACAGTACCAAA+AGG | 0.598804 | 4.4:-38299165 | None:intergenic |
| AGGTGAGTGAGTTGACAGAA+AGG | 0.599718 | 4.4:+38299067 | MS.gene45706:CDS |
| AATCGAGACCAACCCATCAC+AGG | 0.602173 | 4.4:-38299669 | None:intergenic |
| TGTCGCGACAAGGCTTTCCA+AGG | 0.604324 | 4.4:+38299776 | MS.gene45706:CDS |
| ATGACGAACCTGTGATGGGT+TGG | 0.611315 | 4.4:+38299661 | MS.gene45706:CDS |
| AGGCTTCAGCTAGCAGAGCA+AGG | 0.611488 | 4.4:+38299087 | MS.gene45706:CDS |
| TTCGCCGAAGCTTATCAGGA+TGG | 0.615270 | 4.4:-38299989 | None:intergenic |
| CAGTATCAATACCATCATCC+GGG | 0.624695 | 4.4:-38299431 | None:intergenic |
| GATTCATCAGGAGCAACAGT+AGG | 0.626788 | 4.4:-38299198 | None:intergenic |
| TTCACCAATATCAAGAGAGT+CGG | 0.631376 | 4.4:+38299324 | MS.gene45706:CDS |
| TGGACTCAACATCCGAATCA+CGG | 0.631798 | 4.4:-38299590 | None:intergenic |
| ATCTATGACGAACCTGTGAT+GGG | 0.642865 | 4.4:+38299657 | MS.gene45706:CDS |
| GATGATGGTATTGATACTGT+TGG | 0.643432 | 4.4:+38299435 | MS.gene45706:CDS |
| TCTTGGGTACAGCAATAGGT+AGG | 0.643632 | 4.4:-38295643 | None:intergenic |
| GCTTTCCAAGGAGAAAGCAT+GGG | 0.644753 | 4.4:+38299788 | MS.gene45706:CDS |
| CTTTCCCTGATGGCTCAAAG+TGG | 0.648347 | 4.4:+38300063 | MS.gene45706:CDS |
| TATTGGTGAACCAGACCTCG+AGG | 0.661264 | 4.4:-38299311 | None:intergenic |
| GATGTTGAGTCCATGAGTGA+TGG | 0.662271 | 4.4:+38299600 | MS.gene45706:CDS |
| CTCGATTAGTTCATACCACG+AGG | 0.662449 | 4.4:+38299685 | MS.gene45706:CDS |
| ATTGGTGAACCAGACCTCGA+GGG | 0.670776 | 4.4:-38299310 | None:intergenic |
| TCTAGTTGTTGCCTTCGACG+AGG | 0.686292 | 4.4:+38299359 | MS.gene45706:CDS |
| AAGAACTCCAATGATTACAG+CGG | 0.714568 | 4.4:-38295549 | None:intergenic |
| CAATGTTAAGGAGACCCTCG+AGG | 0.715442 | 4.4:+38299296 | MS.gene45706:CDS |
| ATTGTAAACCCATATCCTCG+TGG | 0.729649 | 4.4:-38299700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAATTATTATTATAA+CGG | - | chr4.4:38297447-38297466 | None:intergenic | 0.0% |
| !! | TTAAATAATATTATAAAAAA+TGG | - | chr4.4:38297905-38297924 | None:intergenic | 0.0% |
| !!! | TTTTTTATTTTATTTTATTT+TGG | + | chr4.4:38298944-38298963 | MS.gene45706:intron | 0.0% |
| !! | TTGTATATAAAAAGATATAT+CGG | - | chr4.4:38297752-38297771 | None:intergenic | 10.0% |
| !! | TTGTTAATATAAAATTCAAA+TGG | - | chr4.4:38297056-38297075 | None:intergenic | 10.0% |
| !! | TTTAAGCATATTTAATTAAT+TGG | + | chr4.4:38295922-38295941 | MS.gene45706:intron | 10.0% |
| !!! | AACTTTAAAATAAATAATTG+TGG | + | chr4.4:38298659-38298678 | MS.gene45706:intron | 10.0% |
| !!! | AGTATTTTAATTAAAGTAAA+AGG | - | chr4.4:38297313-38297332 | None:intergenic | 10.0% |
| !!! | AGTTTTTATATAAAGTAAAA+GGG | - | chr4.4:38297346-38297365 | None:intergenic | 10.0% |
| !!! | CTTATTTTAAAATAAAGTAA+AGG | - | chr4.4:38297417-38297436 | None:intergenic | 10.0% |
| !!! | TAAAGATATTATATGATTTT+TGG | - | chr4.4:38296415-38296434 | None:intergenic | 10.0% |
| !!! | TTATTTCTTATAAATAGTAT+CGG | + | chr4.4:38297705-38297724 | MS.gene45706:intron | 10.0% |
| !!! | TTGATTTTAATTAAAATTGT+AGG | + | chr4.4:38296236-38296255 | MS.gene45706:intron | 10.0% |
| !! | ATAGGTAATTTATCTATAAT+TGG | - | chr4.4:38298402-38298421 | None:intergenic | 15.0% |
| !! | ATGAGTTGTTTATTATAAAT+AGG | - | chr4.4:38297601-38297620 | None:intergenic | 15.0% |
| !! | CATATAATTCAATAAAAAAG+TGG | - | chr4.4:38296053-38296072 | None:intergenic | 15.0% |
| !! | TATTATAAAAAATGGCAAAA+TGG | - | chr4.4:38297897-38297916 | None:intergenic | 15.0% |
| !! | TTGGAAAATAAATTGTAATA+AGG | + | chr4.4:38298485-38298504 | MS.gene45706:intron | 15.0% |
| !!! | ATGATATTTTAATTGGAAAA+GGG | + | chr4.4:38298449-38298468 | MS.gene45706:intron | 15.0% |
| !!! | CATTAAATAATTGATTTATC+TGG | + | chr4.4:38297631-38297650 | MS.gene45706:intron | 15.0% |
| !!! | GAGTTTTTATATAAAGTAAA+AGG | - | chr4.4:38297347-38297366 | None:intergenic | 15.0% |
| !!! | TAGTTTAAAACCATTAATAT+AGG | + | chr4.4:38297480-38297499 | MS.gene45706:intron | 15.0% |
| !!! | TTATTTTATTTTATTTTGGC+AGG | + | chr4.4:38298948-38298967 | MS.gene45706:intron | 15.0% |
| !!! | TTCAAACTTGTAATTTTATA+AGG | + | chr4.4:38298547-38298566 | MS.gene45706:intron | 15.0% |
| !!! | TTTAAAAACTCAAGTTTTTA+CGG | + | chr4.4:38297184-38297203 | MS.gene45706:intron | 15.0% |
| !! | AAATTTAGTGCAACATATAA+AGG | + | chr4.4:38298423-38298442 | MS.gene45706:intron | 20.0% |
| !! | AATTTAGTGCAACATATAAA+GGG | + | chr4.4:38298424-38298443 | MS.gene45706:intron | 20.0% |
| !! | CACAAAAATAGGAATAAAAT+TGG | + | chr4.4:38297994-38298013 | MS.gene45706:intron | 20.0% |
| !! | CATGTGATAATTAATTCATT+TGG | - | chr4.4:38297136-38297155 | None:intergenic | 20.0% |
| !! | GTAAAAAGTAATTAAGTCTA+GGG | - | chr4.4:38298099-38298118 | None:intergenic | 20.0% |
| !! | TATATTATATGCTATATCGT+TGG | - | chr4.4:38296306-38296325 | None:intergenic | 20.0% |
| !! | TTGTTTATTATAAATAGGAC+CGG | - | chr4.4:38297596-38297615 | None:intergenic | 20.0% |
| !!! | AAAGGGAATGATATTTTAAT+TGG | + | chr4.4:38298466-38298485 | MS.gene45706:intron | 20.0% |
| !!! | AACTATACTTATCTTTTTCA+AGG | + | chr4.4:38296277-38296296 | MS.gene45706:intron | 20.0% |
| !!! | AGTTTGTTTAAGGATATAAT+CGG | + | chr4.4:38296374-38296393 | MS.gene45706:intron | 20.0% |
| !!! | ATAAAAAGATATATCGGTTT+TGG | - | chr4.4:38297746-38297765 | None:intergenic | 20.0% |
| !!! | ATGTGACATATTTTAAAAGA+TGG | + | chr4.4:38297082-38297101 | MS.gene45706:intron | 20.0% |
| !!! | GATGATATTTTAATTGGAAA+AGG | + | chr4.4:38298448-38298467 | MS.gene45706:intron | 20.0% |
| !!! | TGAAGAAAGGTATTATAAAA+TGG | - | chr4.4:38298751-38298770 | None:intergenic | 20.0% |
| !!! | TTAAAAACTCAAGTTTTTAC+GGG | + | chr4.4:38297185-38297204 | MS.gene45706:intron | 20.0% |
| !!! | TTCATATTTTTACTCATTCA+CGG | + | chr4.4:38297002-38297021 | MS.gene45706:intron | 20.0% |
| !!! | TTGTTGATTATTATGTCAAT+GGG | + | chr4.4:38300021-38300040 | MS.gene45706:CDS | 20.0% |
| ! | AAAGAGTTCTTCATTGAAAA+CGG | - | chr4.4:38299820-38299839 | None:intergenic | 25.0% |
| ! | AATGAACAATGCACAAAAAT+AGG | + | chr4.4:38297983-38298002 | MS.gene45706:intron | 25.0% |
| ! | ATTGATACTGTTGGAAAAAA+AGG | + | chr4.4:38299444-38299463 | MS.gene45706:CDS | 25.0% |
| ! | CAAGAAAGATAGTTAATCTT+TGG | - | chr4.4:38295686-38295705 | None:intergenic | 25.0% |
| ! | CATGTTAAAATCAGAATTTG+TGG | + | chr4.4:38299008-38299027 | MS.gene45706:CDS | 25.0% |
| ! | CATTGAATAATTGATGTATC+TGG | - | chr4.4:38297670-38297689 | None:intergenic | 25.0% |
| ! | GCAGTAGAAAATCAAATAAA+CGG | + | chr4.4:38297778-38297797 | MS.gene45706:intron | 25.0% |
| ! | GGGTAAAATTGAAAGAAAAA+TGG | - | chr4.4:38298079-38298098 | None:intergenic | 25.0% |
| ! | GGTAAAAAGTAATTAAGTCT+AGG | - | chr4.4:38298100-38298119 | None:intergenic | 25.0% |
| ! | GGTAATTTATCTATAATTGG+TGG | - | chr4.4:38298399-38298418 | None:intergenic | 25.0% |
| ! | TAACCTCAGTAAATTAAAAC+CGG | + | chr4.4:38299947-38299966 | MS.gene45706:CDS | 25.0% |
| ! | TAATTCACGTGAATAATTAC+CGG | - | chr4.4:38299969-38299988 | None:intergenic | 25.0% |
| ! | TATGTTGCACTAAATTTGAT+AGG | - | chr4.4:38298420-38298439 | None:intergenic | 25.0% |
| ! | TCAATAAAAAAGTGGACAAA+CGG | - | chr4.4:38296045-38296064 | None:intergenic | 25.0% |
| ! | TCTAATATATTTGCCAATCT+CGG | - | chr4.4:38299231-38299250 | None:intergenic | 25.0% |
| ! | TGAGAAACAAAGAATTCATT+AGG | - | chr4.4:38295602-38295621 | None:intergenic | 25.0% |
| ! | TGAGAAACTAATAAGTCATT+GGG | - | chr4.4:38298920-38298939 | None:intergenic | 25.0% |
| ! | TGGATAATCCAAATTCTATT+GGG | + | chr4.4:38295942-38295961 | MS.gene45706:intron | 25.0% |
| ! | TTAAGACATGCACATTAAAA+TGG | - | chr4.4:38298121-38298140 | None:intergenic | 25.0% |
| ! | TTGACGGTTCATATATTAAT+GGG | - | chr4.4:38297954-38297973 | None:intergenic | 25.0% |
| ! | TTGAGAAACTAATAAGTCAT+TGG | - | chr4.4:38298921-38298940 | None:intergenic | 25.0% |
| ! | TTGGATAATCCAAATTCTAT+TGG | + | chr4.4:38295941-38295960 | MS.gene45706:intron | 25.0% |
| ! | TTTACTTTACTACATGATGT+GGG | + | chr4.4:38295849-38295868 | MS.gene45706:intron | 25.0% |
| !! | AGTTTGAAGTTAGAGAATTT+CGG | - | chr4.4:38298535-38298554 | None:intergenic | 25.0% |
| !! | GTTGTTGATTATTATGTCAA+TGG | + | chr4.4:38300020-38300039 | MS.gene45706:CDS | 25.0% |
| !! | TTCTTATAAATAGTATCGGA+AGG | + | chr4.4:38297709-38297728 | MS.gene45706:intron | 25.0% |
| !! | TTTTACTTTACTACATGATG+TGG | + | chr4.4:38295848-38295867 | MS.gene45706:intron | 25.0% |
| !!! | AAATGGATTACTATGAGAAA+TGG | - | chr4.4:38297039-38297058 | None:intergenic | 25.0% |
| !!! | AAGGGAGATGATATTTTAAT+TGG | + | chr4.4:38298442-38298461 | MS.gene45706:intron | 25.0% |
| !!! | AATGGATTACTATGAGAAAT+GGG | - | chr4.4:38297038-38297057 | None:intergenic | 25.0% |
| !!! | ATATACTGTTTCTATTGTAG+TGG | - | chr4.4:38297513-38297532 | None:intergenic | 25.0% |
| !!! | ATCTTGATAATGATGAAGAA+AGG | - | chr4.4:38298764-38298783 | None:intergenic | 25.0% |
| !!! | GAAAGTTGGTAATACTATTA+TGG | - | chr4.4:38296011-38296030 | None:intergenic | 25.0% |
| AAAGTACGGTAATAGAATCT+AGG | + | chr4.4:38296456-38296475 | MS.gene45706:intron | 30.0% | |
| AAATGAACAGCTGAAAAAAC+AGG | + | chr4.4:38299047-38299066 | MS.gene45706:CDS | 30.0% | |
| AACAAGCTAACTCAATTGTT+TGG | - | chr4.4:38296844-38296863 | None:intergenic | 30.0% | |
| AAGGCAACAACTAGATAATT+AGG | - | chr4.4:38299354-38299373 | None:intergenic | 30.0% | |
| AATGCCAGTAGTATATTGTA+AGG | + | chr4.4:38298139-38298158 | MS.gene45706:intron | 30.0% | |
| ATACTGTTGGAAAAAAAGGA+GGG | + | chr4.4:38299448-38299467 | MS.gene45706:CDS | 30.0% | |
| ATCTATAATTGGTGGAAAGA+TGG | - | chr4.4:38298391-38298410 | None:intergenic | 30.0% | |
| ATGATTCACCCAATAGAATT+TGG | - | chr4.4:38295953-38295972 | None:intergenic | 30.0% | |
| ATGCCAGTAGTATATTGTAA+GGG | + | chr4.4:38298140-38298159 | MS.gene45706:intron | 30.0% | |
| CAAGTTAATGTTCATCCTTA+CGG | + | chr4.4:38297803-38297822 | MS.gene45706:intron | 30.0% | |
| CAATGTTGTTCTTATTGTTG+CGG | - | chr4.4:38298239-38298258 | None:intergenic | 30.0% | |
| CAGTTGTTTAAGGATATGAT+CGG | + | chr4.4:38296745-38296764 | MS.gene45706:intron | 30.0% | |
| CATTATCAAGATTATGTGAG+AGG | + | chr4.4:38298772-38298791 | MS.gene45706:intron | 30.0% | |
| CTAATATATTTGCCAATCTC+GGG | - | chr4.4:38299230-38299249 | None:intergenic | 30.0% | |
| GAAAAAATGCTTCTTGCATT+AGG | + | chr4.4:38299123-38299142 | MS.gene45706:CDS | 30.0% | |
| GAGAAACTAATAAGTCATTG+GGG | - | chr4.4:38298919-38298938 | None:intergenic | 30.0% | |
| GATTTAGACTGTTTATCTGA+TGG | + | chr4.4:38296478-38296497 | MS.gene45706:intron | 30.0% | |
| GTTGACGGTTCATATATTAA+TGG | - | chr4.4:38297955-38297974 | None:intergenic | 30.0% | |
| TAACTCAATCAAAGTCGTAA+TGG | + | chr4.4:38298799-38298818 | MS.gene45706:intron | 30.0% | |
| TACTTAGGCAGTAAGTAATA+GGG | + | chr4.4:38296557-38296576 | MS.gene45706:intron | 30.0% | |
| TCAACAAATAGCATTCGTAT+AGG | + | chr4.4:38296349-38296368 | MS.gene45706:intron | 30.0% | |
| TCGAAAATCAGAGTTCTTAT+AGG | + | chr4.4:38298870-38298889 | MS.gene45706:intron | 30.0% | |
| TGACGGTTCATATATTAATG+GGG | - | chr4.4:38297953-38297972 | None:intergenic | 30.0% | |
| TGATCGGAAGTAAAAAAACT+CGG | + | chr4.4:38296761-38296780 | MS.gene45706:intron | 30.0% | |
| TGGCAAAATGGTTTAAATGA+AGG | - | chr4.4:38297885-38297904 | None:intergenic | 30.0% | |
| TTACTTAGGCAGTAAGTAAT+AGG | + | chr4.4:38296556-38296575 | MS.gene45706:intron | 30.0% | |
| TTATTATAAATAGGACCGGA+GGG | - | chr4.4:38297592-38297611 | None:intergenic | 30.0% | |
| TTGATATCAGTAGAGATTGA+GGG | - | chr4.4:38295520-38295539 | None:intergenic | 30.0% | |
| TTGTTGTACTTGCAAAAGTA+CGG | + | chr4.4:38296442-38296461 | MS.gene45706:intron | 30.0% | |
| TTTATTATAAATAGGACCGG+AGG | - | chr4.4:38297593-38297612 | None:intergenic | 30.0% | |
| ! | GGGGTATGATAAAATCTTTT+TGG | - | chr4.4:38297571-38297590 | None:intergenic | 30.0% |
| ! | GTTCATTTCATTGTTGTTGA+CGG | - | chr4.4:38297970-38297989 | None:intergenic | 30.0% |
| ! | TCATGCTTCTAAAAGAACTA+TGG | + | chr4.4:38299869-38299888 | MS.gene45706:CDS | 30.0% |
| ! | TTTTTACTCATTCACGGAAT+TGG | + | chr4.4:38297008-38297027 | MS.gene45706:intron | 30.0% |
| !! | AAGTTCTTTTCAAGACAGTA+AGG | + | chr4.4:38299916-38299935 | MS.gene45706:CDS | 30.0% |
| !! | TTACGGTAGTAGCTTTAAAT+GGG | + | chr4.4:38297820-38297839 | MS.gene45706:intron | 30.0% |
| !!! | AACTCTGATTTTCGAGTTAT+GGG | - | chr4.4:38298865-38298884 | None:intergenic | 30.0% |
| !!! | TTACCGGTTTTAATTTACTG+AGG | - | chr4.4:38299953-38299972 | None:intergenic | 30.0% |
| AACACAAAATTCTGCCCAAA+AGG | - | chr4.4:38297852-38297871 | None:intergenic | 35.0% | |
| AAGAACTCCAATGATTACAG+CGG | - | chr4.4:38295552-38295571 | None:intergenic | 35.0% | |
| ACACAAAATTCTGCCCAAAA+GGG | - | chr4.4:38297851-38297870 | None:intergenic | 35.0% | |
| ACAGTATCAATACCATCATC+CGG | - | chr4.4:38299435-38299454 | None:intergenic | 35.0% | |
| ACTTAGGCAGTAAGTAATAG+GGG | + | chr4.4:38296558-38296577 | MS.gene45706:intron | 35.0% | |
| AGGATATGGGTTTACAATTC+TGG | + | chr4.4:38299705-38299724 | MS.gene45706:CDS | 35.0% | |
| ATTACCATCCTGATAAGCTT+CGG | + | chr4.4:38299985-38300004 | MS.gene45706:CDS | 35.0% | |
| ATTCCTAAAAGACCTCTGAA+AGG | - | chr4.4:38296713-38296732 | None:intergenic | 35.0% | |
| ATTGACAGTCCAGTTGTTTA+AGG | + | chr4.4:38296735-38296754 | MS.gene45706:intron | 35.0% | |
| CAAAAGCTCAATTGAAGGAA+TGG | - | chr4.4:38299751-38299770 | None:intergenic | 35.0% | |
| CACAATAACATGACAGCTTA+TGG | + | chr4.4:38299624-38299643 | MS.gene45706:CDS | 35.0% | |
| CGATCATATCCTTAAACAAC+TGG | - | chr4.4:38296747-38296766 | None:intergenic | 35.0% | |
| CGCAACAATAAGAACAACAT+TGG | + | chr4.4:38298237-38298256 | MS.gene45706:intron | 35.0% | |
| CTCAATCTCTACTGATATCA+AGG | + | chr4.4:38295519-38295538 | MS.gene45706:CDS | 35.0% | |
| CTTAACATTGGAGTTTGCAA+GGG | - | chr4.4:38299286-38299305 | None:intergenic | 35.0% | |
| CTTGATATCAGTAGAGATTG+AGG | - | chr4.4:38295521-38295540 | None:intergenic | 35.0% | |
| GAAAATGAAACCTGAGTCTT+GGG | - | chr4.4:38295662-38295681 | None:intergenic | 35.0% | |
| GATACTGTTGGAAAAAAAGG+AGG | + | chr4.4:38299447-38299466 | MS.gene45706:CDS | 35.0% | |
| GTAATCATTGGAGTTCTTAC+TGG | + | chr4.4:38295554-38295573 | MS.gene45706:CDS | 35.0% | |
| TATTATAAATAGGACCGGAG+GGG | - | chr4.4:38297591-38297610 | None:intergenic | 35.0% | |
| TCACGGTATAGATGATCAAA+AGG | - | chr4.4:38299576-38299595 | None:intergenic | 35.0% | |
| TGAAAATGAAACCTGAGTCT+TGG | - | chr4.4:38295663-38295682 | None:intergenic | 35.0% | |
| TGATCATCTATACCGTGATT+CGG | + | chr4.4:38299578-38299597 | MS.gene45706:CDS | 35.0% | |
| TGCCAGTAGTATATTGTAAG+GGG | + | chr4.4:38298141-38298160 | MS.gene45706:intron | 35.0% | |
| TGGTGCTCTTCCTATATTAA+TGG | - | chr4.4:38297493-38297512 | None:intergenic | 35.0% | |
| TTAGGTAAACAGGAAAAAGC+TGG | + | chr4.4:38299141-38299160 | MS.gene45706:CDS | 35.0% | |
| TTCACCAATATCAAGAGAGT+CGG | + | chr4.4:38299324-38299343 | MS.gene45706:CDS | 35.0% | |
| ! | CACCAAATGACGAATCTTTT+GGG | + | chr4.4:38296873-38296892 | MS.gene45706:intron | 35.0% |
| ! | CATTCCTTCAATTGAGCTTT+TGG | + | chr4.4:38299749-38299768 | MS.gene45706:CDS | 35.0% |
| ! | CATTTAAAGCTACTACCGTA+AGG | - | chr4.4:38297821-38297840 | None:intergenic | 35.0% |
| ! | CGTATAGGCAAGTTTGTTTA+AGG | + | chr4.4:38296364-38296383 | MS.gene45706:intron | 35.0% |
| ! | TTCCTAAAAGACCTCTGAAA+GGG | - | chr4.4:38296712-38296731 | None:intergenic | 35.0% |
| !! | AACAGTAGGATTGGTTCTTA+AGG | - | chr4.4:38299187-38299206 | None:intergenic | 35.0% |
| !! | CTTACGGTAGTAGCTTTAAA+TGG | + | chr4.4:38297819-38297838 | MS.gene45706:intron | 35.0% |
| !! | GATGATGGTATTGATACTGT+TGG | + | chr4.4:38299435-38299454 | MS.gene45706:CDS | 35.0% |
| !! | GCGGATTGTTTCTATTTCAA+TGG | - | chr4.4:38298220-38298239 | None:intergenic | 35.0% |
| !! | TATACCGACTCTCTTGATAT+TGG | - | chr4.4:38299331-38299350 | None:intergenic | 35.0% |
| !!! | ACTCTGATTTTCGAGTTATG+GGG | - | chr4.4:38298864-38298883 | None:intergenic | 35.0% |
| !!! | AGTAAGTAATAGGGGTGTTT+TGG | + | chr4.4:38296566-38296585 | MS.gene45706:intron | 35.0% |
| !!! | GAACTCTGATTTTCGAGTTA+TGG | - | chr4.4:38298866-38298885 | None:intergenic | 35.0% |
| !!! | GAATCTTTTGGGACAAACTT+TGG | + | chr4.4:38296884-38296903 | MS.gene45706:intron | 35.0% |
| !!! | GTAAGTAATAGGGGTGTTTT+GGG | + | chr4.4:38296567-38296586 | MS.gene45706:intron | 35.0% |
| !!! | GTTATGGGGTTTTGAAGATT+TGG | - | chr4.4:38298850-38298869 | None:intergenic | 35.0% |
| AAAAAGTGGACAAACGGACA+CGG | - | chr4.4:38296039-38296058 | None:intergenic | 40.0% | |
| AATAGGTAGGTGACGATTTG+AGG | - | chr4.4:38295633-38295652 | None:intergenic | 40.0% | |
| ACCCCCTTACAATATACTAC+TGG | - | chr4.4:38298146-38298165 | None:intergenic | 40.0% | |
| AGCTCAATTGAAGGAATGGT+TGG | - | chr4.4:38299747-38299766 | None:intergenic | 40.0% | |
| AGTTCATACCACGAGGATAT+GGG | + | chr4.4:38299692-38299711 | MS.gene45706:CDS | 40.0% | |
| ATCATTGCCGCTGTAATCAT+TGG | + | chr4.4:38295542-38295561 | MS.gene45706:CDS | 40.0% | |
| ATCTATGACGAACCTGTGAT+GGG | + | chr4.4:38299657-38299676 | MS.gene45706:CDS | 40.0% | |
| ATTATAAATAGGACCGGAGG+GGG | - | chr4.4:38297590-38297609 | None:intergenic | 40.0% | |
| ATTGTAAACCCATATCCTCG+TGG | - | chr4.4:38299703-38299722 | None:intergenic | 40.0% | |
| CAGTATCAATACCATCATCC+GGG | - | chr4.4:38299434-38299453 | None:intergenic | 40.0% | |
| CCAAAAGATTCGTCATTTGG+TGG | - | chr4.4:38296875-38296894 | None:intergenic | 40.0% | |
| CCTTAACATTGGAGTTTGCA+AGG | - | chr4.4:38299287-38299306 | None:intergenic | 40.0% | |
| CCTTGCAAACTCCAATGTTA+AGG | + | chr4.4:38299284-38299303 | MS.gene45706:CDS | 40.0% | |
| CGATCCAAAAGCTCAATTGA+AGG | - | chr4.4:38299756-38299775 | None:intergenic | 40.0% | |
| GCCAGTAGTATATTGTAAGG+GGG | + | chr4.4:38298142-38298161 | MS.gene45706:intron | 40.0% | |
| GCTTCTTGCATTAGGTAAAC+AGG | + | chr4.4:38299131-38299150 | MS.gene45706:CDS | 40.0% | |
| GTCCCAAAAGATTCGTCATT+TGG | - | chr4.4:38296878-38296897 | None:intergenic | 40.0% | |
| GTGCAAACTTGCACATGATA+AGG | - | chr4.4:38298715-38298734 | None:intergenic | 40.0% | |
| GTGTTAAGACTTCGACTTTC+AGG | - | chr4.4:38296929-38296948 | None:intergenic | 40.0% | |
| GTTATTGTGACCATCACTCA+TGG | - | chr4.4:38299613-38299632 | None:intergenic | 40.0% | |
| GTTCTTCATTGAAAACGGCT+TGG | - | chr4.4:38299815-38299834 | None:intergenic | 40.0% | |
| GTTTATCTGATGGCTTGAGA+AGG | + | chr4.4:38296488-38296507 | MS.gene45706:intron | 40.0% | |
| TAGTTCATACCACGAGGATA+TGG | + | chr4.4:38299691-38299710 | MS.gene45706:CDS | 40.0% | |
| TATCTATGACGAACCTGTGA+TGG | + | chr4.4:38299656-38299675 | MS.gene45706:CDS | 40.0% | |
| TGCCTAAGTAACGACAAATC+AGG | - | chr4.4:38296547-38296566 | None:intergenic | 40.0% | |
| ! | AGATTTTATCATACCCCCTC+CGG | + | chr4.4:38297574-38297593 | MS.gene45706:intron | 40.0% |
| ! | AGCCTGATTTGTCGTTACTT+AGG | + | chr4.4:38296542-38296561 | MS.gene45706:intron | 40.0% |
| ! | CCACCAAATGACGAATCTTT+TGG | + | chr4.4:38296872-38296891 | MS.gene45706:intron | 40.0% |
| ! | CCCATTTTACAAAAGAGACC+CGG | + | chr4.4:38299413-38299432 | MS.gene45706:CDS | 40.0% |
| ! | CCGGGTCTCTTTTGTAAAAT+GGG | - | chr4.4:38299416-38299435 | None:intergenic | 40.0% |
| ! | TAAATGGGACACACCCTTTT+GGG | + | chr4.4:38297835-38297854 | MS.gene45706:intron | 40.0% |
| ! | TCCGGGTCTCTTTTGTAAAA+TGG | - | chr4.4:38299417-38299436 | None:intergenic | 40.0% |
| ! | TTAAATGGGACACACCCTTT+TGG | + | chr4.4:38297834-38297853 | MS.gene45706:intron | 40.0% |
| !! | CTTTGAAATTTCCTCGTCGA+AGG | - | chr4.4:38299373-38299392 | None:intergenic | 40.0% |
| !!! | CAAGAAGCATTTTTTCTGCC+TGG | - | chr4.4:38299119-38299138 | None:intergenic | 40.0% |
| !!! | TAGGGGTGTTTTGGGTATTT+AGG | + | chr4.4:38296575-38296594 | MS.gene45706:intron | 40.0% |
| AAGGCCTTGACAGTACCAAA+AGG | - | chr4.4:38299168-38299187 | None:intergenic | 45.0% | |
| ACGACAAATCAGGCTCATAG+AGG | - | chr4.4:38296537-38296556 | None:intergenic | 45.0% | |
| ATCAGGAGCAACAGTAGGAT+TGG | - | chr4.4:38299196-38299215 | None:intergenic | 45.0% | |
| ATTTGCCAATCTCGGGTTCA+CGG | - | chr4.4:38299223-38299242 | None:intergenic | 45.0% | |
| CGACAAATCAGGCTCATAGA+GGG | - | chr4.4:38296536-38296555 | None:intergenic | 45.0% | |
| CTACATGATGTGGGTCATTG+AGG | + | chr4.4:38295858-38295877 | MS.gene45706:intron | 45.0% | |
| GATGTTGAGTCCATGAGTGA+TGG | + | chr4.4:38299600-38299619 | MS.gene45706:CDS | 45.0% | |
| GATTCATCAGGAGCAACAGT+AGG | - | chr4.4:38299201-38299220 | None:intergenic | 45.0% | |
| GGTATTTAGGCGCGTTCTAA+AGG | + | chr4.4:38296588-38296607 | MS.gene45706:intron | 45.0% | |
| TACAAAAGAGACCCGGATGA+TGG | + | chr4.4:38299420-38299439 | MS.gene45706:CDS | 45.0% | |
| TATTGCTGTACCCAAGACTC+AGG | + | chr4.4:38295649-38295668 | MS.gene45706:CDS | 45.0% | |
| TCTTGGGTACAGCAATAGGT+AGG | - | chr4.4:38295646-38295665 | None:intergenic | 45.0% | |
| TGAGTCTTGGGTACAGCAAT+AGG | - | chr4.4:38295650-38295669 | None:intergenic | 45.0% | |
| TGGACTCAACATCCGAATCA+CGG | - | chr4.4:38299593-38299612 | None:intergenic | 45.0% | |
| TTCATTCGCCGAAGCTTATC+AGG | - | chr4.4:38299996-38300015 | None:intergenic | 45.0% | |
| ! | AGCCCTTTCAGAGGTCTTTT+AGG | + | chr4.4:38296707-38296726 | MS.gene45706:intron | 45.0% |
| ! | AGGTGAGTGAGTTGACAGAA+AGG | + | chr4.4:38299067-38299086 | MS.gene45706:CDS | 45.0% |
| ! | CAGGAAAAAGCTGGACCTTT+TGG | + | chr4.4:38299150-38299169 | MS.gene45706:CDS | 45.0% |
| ! | CTCGATTAGTTCATACCACG+AGG | + | chr4.4:38299685-38299704 | MS.gene45706:CDS | 45.0% |
| ! | CTTTCAGGTGAATGAGACTC+TGG | - | chr4.4:38296914-38296933 | None:intergenic | 45.0% |
| ! | GCTTTCCAAGGAGAAAGCAT+GGG | + | chr4.4:38299788-38299807 | MS.gene45706:CDS | 45.0% |
| ! | TGGACCTTTTGGTACTGTCA+AGG | + | chr4.4:38299161-38299180 | MS.gene45706:CDS | 45.0% |
| !! | AGGCGCTAAGGCTTTTGAAA+GGG | + | chr4.4:38296678-38296697 | MS.gene45706:intron | 45.0% |
| !! | GGAAAGGTTTGAGAGCATCT+TGG | - | chr4.4:38300049-38300068 | None:intergenic | 45.0% |
| !! | TAAAATCAAATTTATAAAAA+GGG | - | chr4.4:38296204-38296223 | None:intergenic | 5.0% |
| !! | TTAAAATCAAATTTATAAAA+AGG | - | chr4.4:38296205-38296224 | None:intergenic | 5.0% |
| !!! | TTATTTTAAAATAAAGTAAA+GGG | - | chr4.4:38297416-38297435 | None:intergenic | 5.0% |
| AAGCCTTAGCGCCTCCTAAA+AGG | - | chr4.4:38296672-38296691 | None:intergenic | 50.0% | |
| AATCGAGACCAACCCATCAC+AGG | - | chr4.4:38299672-38299691 | None:intergenic | 50.0% | |
| AGCAGAGCAAGGAAAAGACC+AGG | + | chr4.4:38299098-38299117 | MS.gene45706:CDS | 50.0% | |
| AGCATGAAGCCCGTCATAAC+CGG | - | chr4.4:38299856-38299875 | None:intergenic | 50.0% | |
| AGCCTTAGCGCCTCCTAAAA+GGG | - | chr4.4:38296671-38296690 | None:intergenic | 50.0% | |
| AGGCTTCAAGAAGCGAGTAG+AGG | + | chr4.4:38296608-38296627 | MS.gene45706:intron | 50.0% | |
| ATTGGTGAACCAGACCTCGA+GGG | - | chr4.4:38299313-38299332 | None:intergenic | 50.0% | |
| CAATGTTAAGGAGACCCTCG+AGG | + | chr4.4:38299296-38299315 | MS.gene45706:CDS | 50.0% | |
| CACTTTGAGCCATCAGGGAA+AGG | - | chr4.4:38300065-38300084 | None:intergenic | 50.0% | |
| CTCGAGGGTCTCCTTAACAT+TGG | - | chr4.4:38299298-38299317 | None:intergenic | 50.0% | |
| CTTCAAGAAGCGAGTAGAGG+CGG | + | chr4.4:38296611-38296630 | MS.gene45706:intron | 50.0% | |
| CTTTCCCTGATGGCTCAAAG+TGG | + | chr4.4:38300063-38300082 | MS.gene45706:CDS | 50.0% | |
| GCTCTCAAACCTTTCCCTGA+TGG | + | chr4.4:38300053-38300072 | MS.gene45706:CDS | 50.0% | |
| GGCTTTCCAAGGAGAAAGCA+TGG | + | chr4.4:38299787-38299806 | MS.gene45706:CDS | 50.0% | |
| GGGTCTAAAAGCCCTTTCAG+AGG | + | chr4.4:38296698-38296717 | MS.gene45706:intron | 50.0% | |
| TAAAAGGGCCATGAGGCTCA+AGG | - | chr4.4:38296656-38296675 | None:intergenic | 50.0% | |
| TATTGGTGAACCAGACCTCG+AGG | - | chr4.4:38299314-38299333 | None:intergenic | 50.0% | |
| TCTAGTTGTTGCCTTCGACG+AGG | + | chr4.4:38299359-38299378 | MS.gene45706:CDS | 50.0% | |
| TGAATCCGTGAACCCGAGAT+TGG | + | chr4.4:38299215-38299234 | MS.gene45706:CDS | 50.0% | |
| TTCGCCGAAGCTTATCAGGA+TGG | - | chr4.4:38299992-38300011 | None:intergenic | 50.0% | |
| TTGGTCCCATGCTTTCTCCT+TGG | - | chr4.4:38299796-38299815 | None:intergenic | 50.0% | |
| ! | CTCTTTTATCCGTCCCATCC+CGG | + | chr4.4:38299834-38299853 | MS.gene45706:CDS | 50.0% |
| ! | TTGAGCCTCATGGCCCTTTT+AGG | + | chr4.4:38296655-38296674 | MS.gene45706:intron | 50.0% |
| ! | TTTTGGATCGTGTCGCGACA+AGG | + | chr4.4:38299766-38299785 | MS.gene45706:CDS | 50.0% |
| !! | ATGACGAACCTGTGATGGGT+TGG | + | chr4.4:38299661-38299680 | MS.gene45706:CDS | 50.0% |
| !! | GAGGCGCTAAGGCTTTTGAA+AGG | + | chr4.4:38296677-38296696 | MS.gene45706:intron | 50.0% |
| AAGCCCGTCATAACCGGGAT+GGG | - | chr4.4:38299850-38299869 | None:intergenic | 55.0% | |
| AGGCTTCAGCTAGCAGAGCA+AGG | + | chr4.4:38299087-38299106 | MS.gene45706:CDS | 55.0% | |
| CGGACACGGAGTGTGAAAGT+TGG | - | chr4.4:38296025-38296044 | None:intergenic | 55.0% | |
| CTCGGGTTCACGGATTCATC+AGG | - | chr4.4:38299213-38299232 | None:intergenic | 55.0% | |
| GCATGAAGCCCGTCATAACC+GGG | - | chr4.4:38299855-38299874 | None:intergenic | 55.0% | |
| TGTCGCGACAAGGCTTTCCA+AGG | + | chr4.4:38299776-38299795 | MS.gene45706:CDS | 55.0% | |
| TTAAGGAGACCCTCGAGGTC+TGG | + | chr4.4:38299301-38299320 | MS.gene45706:CDS | 55.0% | |
| ! | AGCCTCATGGCCCTTTTAGG+AGG | + | chr4.4:38296658-38296677 | MS.gene45706:intron | 55.0% |
| CCGTCATAACCGGGATGGGA+CGG | - | chr4.4:38299846-38299865 | None:intergenic | 60.0% | |
| CCGTCCCATCCCGGTTATGA+CGG | + | chr4.4:38299843-38299862 | MS.gene45706:CDS | 60.0% | |
| CGCCTCCTAAAAGGGCCATG+AGG | - | chr4.4:38296663-38296682 | None:intergenic | 60.0% | |
| CGTCCCATCCCGGTTATGAC+GGG | + | chr4.4:38299844-38299863 | MS.gene45706:CDS | 60.0% | |
| GAAGCCCGTCATAACCGGGA+TGG | - | chr4.4:38299851-38299870 | None:intergenic | 60.0% | |
| GAGGGAGAGCAGCTGTCTCT+GGG | + | chr4.4:38299466-38299485 | MS.gene45706:CDS | 60.0% | |
| ! | AGCGAGTAGAGGCGGTGTCA+TGG | + | chr4.4:38296619-38296638 | MS.gene45706:intron | 60.0% |
| !! | CGAGTAGAGGCGGTGTCATG+GGG | + | chr4.4:38296621-38296640 | MS.gene45706:intron | 60.0% |
| !! | GCGAGTAGAGGCGGTGTCAT+GGG | + | chr4.4:38296620-38296639 | MS.gene45706:intron | 60.0% |
| !!! | GGCCCTTTTAGGAGGCGCTA+AGG | + | chr4.4:38296666-38296685 | MS.gene45706:intron | 60.0% |
| GGAACGCGCCTTGAGCCTCA+TGG | + | chr4.4:38296645-38296664 | MS.gene45706:intron | 65.0% | |
| GGAGGGAGAGCAGCTGTCTC+TGG | + | chr4.4:38299465-38299484 | MS.gene45706:CDS | 65.0% | |
| !! | GTAGAGGCGGTGTCATGGGG+AGG | + | chr4.4:38296624-38296643 | MS.gene45706:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 38295506 | 38300088 | 38295506 | ID=MS.gene45706 |
| chr4.4 | mRNA | 38295506 | 38300088 | 38295506 | ID=MS.gene45706.t1;Parent=MS.gene45706 |
| chr4.4 | exon | 38295506 | 38295670 | 38295506 | ID=MS.gene45706.t1.exon1;Parent=MS.gene45706.t1 |
| chr4.4 | CDS | 38295506 | 38295670 | 38295506 | ID=cds.MS.gene45706.t1;Parent=MS.gene45706.t1 |
| chr4.4 | exon | 38298970 | 38300088 | 38298970 | ID=MS.gene45706.t1.exon2;Parent=MS.gene45706.t1 |
| chr4.4 | CDS | 38298970 | 38300088 | 38298970 | ID=cds.MS.gene45706.t1;Parent=MS.gene45706.t1 |
| Gene Sequence |
| Protein sequence |
