Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46928.t1 | XP_003606745.2 | 96.3 | 847 | 31 | 0 | 1 | 847 | 1 | 847 | 0.00E+00 | 1664.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46928.t1 | G7JCI1 | 96.3 | 847 | 31 | 0 | 1 | 847 | 1 | 847 | 0.0e+00 | 1664.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050812 | MS.gene46928 | 0.80439 | 2.21E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene46928 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene46928 | 0.81186 | 5.67E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene46928 | 0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene46928 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene057658 | MS.gene46928 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene46928 | 0.809918 | 1.49E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene46928 | 0.807469 | 4.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46928.t1 | MTR_4g065150 | 97.166 | 847 | 24 | 0 | 1 | 847 | 1 | 847 | 0.0 | 1717 |
| MS.gene46928.t1 | MTR_4g065200 | 84.752 | 846 | 127 | 1 | 1 | 846 | 1 | 844 | 0.0 | 1500 |
| MS.gene46928.t1 | MTR_4g065220 | 77.752 | 863 | 174 | 4 | 1 | 847 | 2 | 862 | 0.0 | 1397 |
| MS.gene46928.t1 | MTR_4g065790 | 65.455 | 110 | 33 | 1 | 641 | 750 | 1 | 105 | 4.74e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46928.t1 | AT5G12950 | 64.218 | 844 | 275 | 12 | 22 | 846 | 25 | 860 | 0.0 | 1093 |
| MS.gene46928.t1 | AT5G12960 | 61.298 | 863 | 308 | 10 | 3 | 847 | 11 | 865 | 0.0 | 1068 |
Find 196 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATCCATTTAACACTTTC+TGG | 0.113218 | 4.3:-38343302 | MS.gene46928:CDS |
| GGAAATCGGATCATTCTTTA+TGG | 0.145770 | 4.3:-38343950 | MS.gene46928:CDS |
| GTATAGGAAAATTAAGAATT+TGG | 0.186644 | 4.3:-38346463 | MS.gene46928:CDS |
| ACATATCAAGCTCATTTAAT+TGG | 0.209264 | 4.3:-38343033 | MS.gene46928:CDS |
| ATATGCTTCCTTTAGGTATT+GGG | 0.214681 | 4.3:-38343356 | MS.gene46928:CDS |
| CTGGTCACACCACTGGAAAT+TGG | 0.256230 | 4.3:-38342237 | MS.gene46928:CDS |
| AGGTTGTCTGCTATTCTCTT+TGG | 0.268031 | 4.3:+38343699 | None:intergenic |
| TTGAAAATATTCAACCTGTT+TGG | 0.271856 | 4.3:-38345302 | MS.gene46928:CDS |
| ACCTTTAGACTTATCCTAAA+AGG | 0.276556 | 4.3:-38342028 | MS.gene46928:CDS |
| TGAAAATATTCAACCTGTTT+GGG | 0.277164 | 4.3:-38345301 | MS.gene46928:CDS |
| TAGAGCCATTATTCAACTTC+AGG | 0.283414 | 4.3:-38341649 | MS.gene46928:CDS |
| AGCTCATTTAATTGGAAATC+AGG | 0.285480 | 4.3:-38343025 | MS.gene46928:CDS |
| GCGTGGTTGTGTTACTATTA+AGG | 0.293026 | 4.3:-38346670 | MS.gene46928:CDS |
| TAAGAGGTTGGTCTGGTTCT+TGG | 0.293356 | 4.3:+38341945 | None:intergenic |
| TCATGTCCGGGAAAGGATTA+AGG | 0.295708 | 4.3:-38341724 | MS.gene46928:CDS |
| TGTCCTCTGAGTTCGGTATT+AGG | 0.297824 | 4.3:+38346240 | None:intergenic |
| TATATGCTTCCTTTAGGTAT+TGG | 0.298978 | 4.3:-38343357 | MS.gene46928:CDS |
| ATGATTTATATGCTTCCTTT+AGG | 0.300957 | 4.3:-38343363 | MS.gene46928:CDS |
| CAGCACCAGAAAGTGTTAAA+TGG | 0.305734 | 4.3:+38343297 | None:intergenic |
| TCCGTTCAAGCTATTCTTTA+CGG | 0.312158 | 4.3:-38342274 | MS.gene46928:CDS |
| TCACCGGTGATCCACTTTAT+AGG | 0.313826 | 4.3:-38344274 | MS.gene46928:CDS |
| TACGGGCCATATCTTCTTGC+TGG | 0.315529 | 4.3:-38342256 | MS.gene46928:CDS |
| TACCTTGTGAATGGTGTAAT+AGG | 0.317036 | 4.3:+38345275 | None:intergenic |
| ATAGGTTGATTTGGAGCTTC+AGG | 0.320627 | 4.3:-38346314 | MS.gene46928:CDS |
| ATGATTGGGCTTTAATGTAT+AGG | 0.322038 | 4.3:-38346479 | MS.gene46928:CDS |
| ATGGCTCTAAAAGAAAATTC+TGG | 0.332053 | 4.3:+38341663 | None:intergenic |
| TATAGGAAAATTAAGAATTT+GGG | 0.335217 | 4.3:-38346462 | MS.gene46928:CDS |
| AGCTAAAACTGGACATAGTT+GGG | 0.338057 | 4.3:-38343325 | MS.gene46928:CDS |
| CCGTTCAAGCTATTCTTTAC+GGG | 0.340431 | 4.3:-38342273 | MS.gene46928:CDS |
| ATTTGAGATCCAACAACAAT+TGG | 0.347619 | 4.3:+38344308 | None:intergenic |
| ATCAGAACAGAAGCCATAAA+AGG | 0.349305 | 4.3:-38342405 | MS.gene46928:intron |
| GGACATCAGTCCGTGAATTC+TGG | 0.356626 | 4.3:-38343891 | MS.gene46928:intron |
| GTTCAATGTTGATGAAGTTC+CGG | 0.362286 | 4.3:+38342766 | None:intergenic |
| TGTGGCACAGCAGACTAATT+TGG | 0.363169 | 4.3:-38346361 | MS.gene46928:CDS |
| CAACTCAGTCGCATACGTTT+CGG | 0.368786 | 4.3:-38346632 | MS.gene46928:CDS |
| ATCTGCATAAGTGACTTCTT+TGG | 0.370767 | 4.3:+38343449 | None:intergenic |
| CAGGCTATCATTCTTTGTGC+TGG | 0.370963 | 4.3:+38345425 | None:intergenic |
| CTTGGGCAGCTTTGCTTCCA+AGG | 0.376140 | 4.3:-38346527 | MS.gene46928:CDS |
| GTATTGCCTTAATCCTTTCC+CGG | 0.378624 | 4.3:+38341718 | None:intergenic |
| CTTCTTTGGTCCATCTGAAC+AGG | 0.382755 | 4.3:+38343463 | None:intergenic |
| CAATCACTGAATGAGGAAAC+TGG | 0.384947 | 4.3:-38345040 | MS.gene46928:CDS |
| GCTTGAACGGATGCATATTC+CGG | 0.392537 | 4.3:+38342286 | None:intergenic |
| ACAGTTTATTTCAACATTCA+AGG | 0.392877 | 4.3:-38341614 | MS.gene46928:CDS |
| CAGAAGAAAACCAACATGAT+TGG | 0.394758 | 4.3:-38346494 | MS.gene46928:CDS |
| AAACCCTCAAGCTCTCAAAA+TGG | 0.394868 | 4.3:-38345137 | MS.gene46928:CDS |
| CACCGGTGATCCACTTTATA+GGG | 0.396898 | 4.3:-38344273 | MS.gene46928:intron |
| AAAATGTCGGCTCTTGTTGC+CGG | 0.398839 | 4.3:-38345396 | MS.gene46928:CDS |
| TAGATGTTGATAGGTTGATT+TGG | 0.399133 | 4.3:-38346323 | MS.gene46928:CDS |
| ATCATTCCAGGCAGATCAAT+TGG | 0.401996 | 4.3:+38341977 | None:intergenic |
| TGGTCACACCACTGGAAATT+GGG | 0.405884 | 4.3:-38342236 | MS.gene46928:CDS |
| TTTAGGATTGCTTGCCGTAC+AGG | 0.408367 | 4.3:-38344728 | MS.gene46928:intron |
| TGGTGACTTACAATCATTCC+AGG | 0.408450 | 4.3:+38341965 | None:intergenic |
| ACAGATCTTGGCCGGCCTGT+TGG | 0.410146 | 4.3:-38345179 | MS.gene46928:intron |
| AACAAAATGTCCTCTGAGTT+CGG | 0.411412 | 4.3:+38346233 | None:intergenic |
| AACACTTTCTGGTGCTGCTA+TGG | 0.415637 | 4.3:-38343291 | MS.gene46928:CDS |
| TGAACTTTCGTGTACCATCT+TGG | 0.416831 | 4.3:-38342748 | MS.gene46928:CDS |
| ACACATATCCCAATTGTTGT+TGG | 0.423041 | 4.3:-38344317 | MS.gene46928:CDS |
| CTTCATTCTCTGTTGTTCCA+AGG | 0.424674 | 4.3:+38343679 | None:intergenic |
| AGCGATATGAGCTCTGGTTC+AGG | 0.427962 | 4.3:-38341803 | MS.gene46928:CDS |
| AAATGTATTGAGTACCTCAT+TGG | 0.428242 | 4.3:+38342925 | None:intergenic |
| AATTGATTTCTGCAGAAAAC+CGG | 0.431411 | 4.3:-38342785 | MS.gene46928:intron |
| AGTTGGCTATTGTAACTAGA+TGG | 0.431586 | 4.3:+38342163 | None:intergenic |
| CCTTTAGCCACAAAACTGAT+AGG | 0.432441 | 4.3:+38341692 | None:intergenic |
| TTGTAGATTCCTCCCGTGGC+GGG | 0.433750 | 4.3:-38341919 | MS.gene46928:CDS |
| AAGCTAAAACTGGACATAGT+TGG | 0.435141 | 4.3:-38343326 | MS.gene46928:CDS |
| GTGTAATAGGGAGCCCAAAC+AGG | 0.437125 | 4.3:+38345288 | None:intergenic |
| TTCTGGTGCTGCTATGGAAC+AGG | 0.438055 | 4.3:-38343285 | MS.gene46928:intron |
| TTGGATCAATATACTGTAGC+TGG | 0.439839 | 4.3:-38345160 | MS.gene46928:CDS |
| ACCTTGTGAATGGTGTAATA+GGG | 0.442206 | 4.3:+38345276 | None:intergenic |
| AATTGAATCATTCTCAAAGC+TGG | 0.442887 | 4.3:-38343113 | MS.gene46928:CDS |
| CTATTGTAACTAGATGGAAT+TGG | 0.448725 | 4.3:+38342169 | None:intergenic |
| GGGGTTTCGAAAGCTAAAAC+TGG | 0.448832 | 4.3:-38343336 | MS.gene46928:CDS |
| GTGTGACCAGCAAGAAGATA+TGG | 0.450346 | 4.3:+38342250 | None:intergenic |
| GTAAATGTCACTCGAAGGTA+AGG | 0.459985 | 4.3:+38342956 | None:intergenic |
| AAAAGCATGGCTTGTCGAAA+AGG | 0.460007 | 4.3:+38344749 | None:intergenic |
| CATCCTCCATACGGTGTACC+AGG | 0.461140 | 4.3:+38346270 | None:intergenic |
| AGAAGAAAACCAACATGATT+GGG | 0.463290 | 4.3:-38346493 | MS.gene46928:CDS |
| TCATCCCTGAAGTTGAATAA+TGG | 0.464760 | 4.3:+38341644 | None:intergenic |
| TGATGATGTTAGATGTTGAT+AGG | 0.465990 | 4.3:-38346332 | MS.gene46928:CDS |
| CACCGACCGATGAATCTGCT+TGG | 0.469681 | 4.3:-38346545 | MS.gene46928:CDS |
| CAAGCAGCAAGTTTCATGTC+CGG | 0.473762 | 4.3:-38341737 | MS.gene46928:CDS |
| GAGGAATCTACAACAATAAG+AGG | 0.474628 | 4.3:+38341929 | None:intergenic |
| TTCTTGACAAGCGGATAGAC+CGG | 0.475274 | 4.3:+38345377 | None:intergenic |
| TCTTGAGGATGTGAGGCTGC+TGG | 0.478709 | 4.3:-38346400 | MS.gene46928:CDS |
| TCCGAGTACACCATTCGTTA+AGG | 0.480683 | 4.3:+38343413 | None:intergenic |
| AAATAACTCACCCTATAAAG+TGG | 0.483711 | 4.3:+38344263 | None:intergenic |
| CTTCTTGCTGGTCACACCAC+TGG | 0.485051 | 4.3:-38342244 | MS.gene46928:CDS |
| TTTGAGATCCAACAACAATT+GGG | 0.485544 | 4.3:+38344309 | None:intergenic |
| GCTCATTTAATTGGAAATCA+GGG | 0.488344 | 4.3:-38343024 | MS.gene46928:CDS |
| TCTTCTGATAAGATCTTCCT+TGG | 0.488745 | 4.3:+38346510 | None:intergenic |
| CGGACATGAAACTTGCTGCT+TGG | 0.489421 | 4.3:+38341738 | None:intergenic |
| GGATTCAAAGCATCTATTGT+TGG | 0.489543 | 4.3:-38344776 | MS.gene46928:CDS |
| ACTTTATCTCTGCCAGCTCC+AGG | 0.490326 | 4.3:-38342686 | MS.gene46928:intron |
| GCTTCTGTTCTGATGATAAG+AGG | 0.491841 | 4.3:+38342414 | None:intergenic |
| TATGCTTCCTTTAGGTATTG+GGG | 0.493468 | 4.3:-38343355 | MS.gene46928:CDS |
| AATGTATTGAGTACCTCATT+GGG | 0.498118 | 4.3:+38342926 | None:intergenic |
| CTACAGTATATTGATCCAAC+AGG | 0.499586 | 4.3:+38345164 | None:intergenic |
| AGAGCCATTATTCAACTTCA+GGG | 0.500947 | 4.3:-38341648 | MS.gene46928:CDS |
| CTAGAACCAATTGATCTGCC+TGG | 0.501481 | 4.3:-38341983 | MS.gene46928:CDS |
| GGAAATTGGGACATTAAAAC+CGG | 0.502210 | 4.3:-38342223 | MS.gene46928:CDS |
| TAAGGGTCCGATGAAGCTGC+TGG | 0.503041 | 4.3:+38342974 | None:intergenic |
| TTCAGAATTCAATATCGCCT+TGG | 0.504238 | 4.3:+38342709 | None:intergenic |
| TTTCGCGGCACCTGTTCAGA+TGG | 0.505819 | 4.3:-38343473 | MS.gene46928:CDS |
| GATAATGATTTCAGGTTTCG+CGG | 0.508807 | 4.3:-38343488 | MS.gene46928:intron |
| CACAACTTATAATATGTTGA+AGG | 0.508895 | 4.3:-38343649 | MS.gene46928:intron |
| CAACTTTGACAGATCTTGGC+CGG | 0.513374 | 4.3:-38345187 | MS.gene46928:intron |
| ACCGACCGATGAATCTGCTT+GGG | 0.516084 | 4.3:-38346544 | MS.gene46928:CDS |
| AGTTGTTCCAGCAGCTTCAT+CGG | 0.516793 | 4.3:-38342981 | MS.gene46928:CDS |
| CTGGTACACCGTATGGAGGA+TGG | 0.521019 | 4.3:-38346269 | MS.gene46928:CDS |
| AATCTACAACAATAAGAGGT+TGG | 0.521360 | 4.3:+38341933 | None:intergenic |
| AAGCAGCAAGTTTCATGTCC+GGG | 0.522415 | 4.3:-38341736 | MS.gene46928:CDS |
| AACTGAAGAAGGCCCGCCAC+GGG | 0.522613 | 4.3:+38341907 | None:intergenic |
| CTTGTGGTACCGGGTTTGGA+TGG | 0.523740 | 4.3:-38341881 | MS.gene46928:CDS |
| TGCAACAGCTTTGTTAGCAC+CGG | 0.526127 | 4.3:+38342204 | None:intergenic |
| CTGGTTCAGGAGTTAAGCTC+AGG | 0.527444 | 4.3:-38341790 | MS.gene46928:CDS |
| GCAAGTTTCATGTCCGGGAA+AGG | 0.529918 | 4.3:-38341731 | MS.gene46928:CDS |
| ACAACAATAAGAGGTTGGTC+TGG | 0.530198 | 4.3:+38341938 | None:intergenic |
| ATTCAAAGAGGAACAGATCC+TGG | 0.532740 | 4.3:-38343390 | MS.gene46928:CDS |
| GTGTATAGCGATATGAGCTC+TGG | 0.536493 | 4.3:-38341809 | MS.gene46928:CDS |
| ATTGAATCATTCTCAAAGCT+GGG | 0.541879 | 4.3:-38343112 | MS.gene46928:CDS |
| ACTTCTTTCAGAAATCCTAC+AGG | 0.542555 | 4.3:+38346426 | None:intergenic |
| ATTGATATGTGTTACCTGTA+CGG | 0.542818 | 4.3:+38344714 | None:intergenic |
| CATCTTAATACCAGAATTCA+CGG | 0.545226 | 4.3:+38343881 | None:intergenic |
| CCGACTCCTGGTACACCGTA+TGG | 0.545762 | 4.3:-38346276 | MS.gene46928:CDS |
| GCCTTAACGAATGGTGTACT+CGG | 0.546534 | 4.3:-38343414 | MS.gene46928:CDS |
| TGAGTGCATCAGCTCTAATG+TGG | 0.550383 | 4.3:-38345449 | MS.gene46928:CDS |
| TGGTACACCGTATGGAGGAT+GGG | 0.551695 | 4.3:-38346268 | MS.gene46928:CDS |
| ACATTAAAGCCCAATCATGT+TGG | 0.552104 | 4.3:+38346484 | None:intergenic |
| GGTGTGTTTAAGCCACCTGT+AGG | 0.554706 | 4.3:-38346441 | MS.gene46928:CDS |
| TTCGAAACCCCAATACCTAA+AGG | 0.555523 | 4.3:+38343348 | None:intergenic |
| GCGACATCAGTACCAGGCTC+AGG | 0.555696 | 4.3:+38342061 | None:intergenic |
| TGGAGCTTCAGGAAGACGGC+TGG | 0.556390 | 4.3:-38346303 | MS.gene46928:CDS |
| TCTGAAAGAAGTTCCTCTTG+AGG | 0.557134 | 4.3:-38346415 | MS.gene46928:CDS |
| AAACTGAAGAAGGCCCGCCA+CGG | 0.557633 | 4.3:+38341906 | None:intergenic |
| ACACTATCAATCACTGAATG+AGG | 0.561789 | 4.3:-38345047 | MS.gene46928:CDS |
| GGTTCCTCCCATCCTCCATA+CGG | 0.561878 | 4.3:+38346261 | None:intergenic |
| ACGGCTGGTTTACCGACTCC+TGG | 0.562227 | 4.3:-38346288 | MS.gene46928:CDS |
| GTCACACGACAGTGGAGTGC+CGG | 0.563651 | 4.3:-38342459 | MS.gene46928:CDS |
| TGATGATAAGAGGCAACTGA+AGG | 0.565999 | 4.3:+38342424 | None:intergenic |
| GAGGATGTGAGGCTGCTGGA+TGG | 0.567281 | 4.3:-38346396 | MS.gene46928:CDS |
| CGAAACGTATGCGACTGAGT+TGG | 0.570019 | 4.3:+38346633 | None:intergenic |
| AGCTGCCCAAGCAGATTCAT+CGG | 0.572308 | 4.3:+38346539 | None:intergenic |
| CTGAAGGGTCAGCTTGTCAC+CGG | 0.574100 | 4.3:+38342440 | None:intergenic |
| TCTTCTCACAGCTATGCGAC+TGG | 0.577040 | 4.3:-38343916 | MS.gene46928:CDS |
| AACAACTGTCTGAGTGAGCA+AGG | 0.578639 | 4.3:+38342997 | None:intergenic |
| CCCGTAAAGAATAGCTTGAA+CGG | 0.578745 | 4.3:+38342273 | None:intergenic |
| CGTGTACCATCTTGGAGTCG+TGG | 0.579613 | 4.3:-38342740 | MS.gene46928:CDS |
| GTTGTAGATTCCTCCCGTGG+CGG | 0.582241 | 4.3:-38341920 | MS.gene46928:CDS |
| GACAGATTTAGACCTGGAGC+TGG | 0.582342 | 4.3:+38342674 | None:intergenic |
| TAGCCACAAAACTGATAGGA+TGG | 0.582916 | 4.3:+38341696 | None:intergenic |
| TATGAGCGTGCCTTAACGAA+TGG | 0.583068 | 4.3:-38343423 | MS.gene46928:CDS |
| AAGAGAATAGCAGACAACCT+TGG | 0.588945 | 4.3:-38343696 | MS.gene46928:CDS |
| CACCCTATAAAGTGGATCAC+CGG | 0.591270 | 4.3:+38344271 | None:intergenic |
| GCCCAAGCAGATTCATCGGT+CGG | 0.593496 | 4.3:+38346543 | None:intergenic |
| TGAAGAGCGACATCAGTACC+AGG | 0.595068 | 4.3:+38342055 | None:intergenic |
| CCATCTTGGAGTCGTGGAGA+CGG | 0.595325 | 4.3:-38342734 | MS.gene46928:CDS |
| GATTTGGAGCTTCAGGAAGA+CGG | 0.595474 | 4.3:-38346307 | MS.gene46928:CDS |
| AAGCTCTCAAAATGGTGACA+TGG | 0.603418 | 4.3:-38345129 | MS.gene46928:CDS |
| GAGTCGTGGAGACGGTGCCA+AGG | 0.604790 | 4.3:-38342726 | MS.gene46928:CDS |
| TGAAGAAGGCCCGCCACGGG+AGG | 0.606277 | 4.3:+38341910 | None:intergenic |
| AGCAGCCTCACATCCTCAAG+AGG | 0.607268 | 4.3:+38346402 | None:intergenic |
| GCTAAAACTGGACATAGTTG+GGG | 0.607890 | 4.3:-38343324 | MS.gene46928:CDS |
| TTACAAATTATATAGTGTAA+CGG | 0.608043 | 4.3:-38344999 | MS.gene46928:intron |
| GAGTACCTCATTGGGAGAGA+AGG | 0.608798 | 4.3:+38342934 | None:intergenic |
| AAGTTCCTCTTGAGGATGTG+AGG | 0.609827 | 4.3:-38346407 | MS.gene46928:CDS |
| CCGTCTCCACGACTCCAAGA+TGG | 0.610098 | 4.3:+38342734 | None:intergenic |
| TCTTTCAGAAATCCTACAGG+TGG | 0.610234 | 4.3:+38346429 | None:intergenic |
| TCTCAAAATGGTGACATGGA+TGG | 0.613135 | 4.3:-38345125 | MS.gene46928:CDS |
| TTTAATGTCCCAATTTCCAG+TGG | 0.613280 | 4.3:+38342228 | None:intergenic |
| TCTCACAGCTATGCGACTGG+AGG | 0.614490 | 4.3:-38343913 | MS.gene46928:CDS |
| ATTTACCTTCTCTCCCAATG+AGG | 0.614801 | 4.3:-38342939 | MS.gene46928:intron |
| TTATAATTCAGATGACAGAC+CGG | 0.617292 | 4.3:-38342305 | MS.gene46928:intron |
| AGCATATAAATCATCACACC+AGG | 0.618298 | 4.3:+38343372 | None:intergenic |
| AGAAGGTAAATGTCACTCGA+AGG | 0.622101 | 4.3:+38342951 | None:intergenic |
| ATTGTTGTAGATTCCTCCCG+TGG | 0.631504 | 4.3:-38341923 | MS.gene46928:CDS |
| CACAAAGAATGATAGCCTGA+AGG | 0.636801 | 4.3:-38345421 | MS.gene46928:CDS |
| AGTATATTGATCCAACAGGC+CGG | 0.642469 | 4.3:+38345168 | None:intergenic |
| GGTGTACTCGGAATTCAAAG+AGG | 0.645519 | 4.3:-38343402 | MS.gene46928:CDS |
| GAGTGCATCAGCTCTAATGT+GGG | 0.646670 | 4.3:-38345448 | MS.gene46928:CDS |
| TCGATATAACATTCACCACT+CGG | 0.652176 | 4.3:+38345086 | None:intergenic |
| CTCACAGCTATGCGACTGGA+GGG | 0.653289 | 4.3:-38343912 | MS.gene46928:CDS |
| GATGATAAGAGGCAACTGAA+GGG | 0.654494 | 4.3:+38342425 | None:intergenic |
| CAAATGCGGTATGAAGTCAC+CGG | 0.655890 | 4.3:-38344290 | MS.gene46928:CDS |
| GGATGGTTCGATTCACGCTG+TGG | 0.656320 | 4.3:-38346379 | MS.gene46928:CDS |
| TTGCATCAAAGAATGAGACA+TGG | 0.656551 | 4.3:-38346599 | MS.gene46928:CDS |
| CCATACGGTGTACCAGGAGT+CGG | 0.658192 | 4.3:+38346276 | None:intergenic |
| TAAATGTCACTCGAAGGTAA+GGG | 0.659796 | 4.3:+38342957 | None:intergenic |
| TACTGAATGATGTATAGACT+AGG | 0.668553 | 4.3:+38343055 | None:intergenic |
| ACTCCTGGTACACCGTATGG+AGG | 0.671069 | 4.3:-38346273 | MS.gene46928:CDS |
| TAGCCTGAAGGAGAAAATGT+CGG | 0.674437 | 4.3:-38345409 | MS.gene46928:CDS |
| TTGTTGTTGGATCTCAAATG+CGG | 0.677316 | 4.3:-38344304 | MS.gene46928:CDS |
| TCCCTATTACACCATTCACA+AGG | 0.687838 | 4.3:-38345277 | MS.gene46928:intron |
| GAACCTAATACCGAACTCAG+AGG | 0.704808 | 4.3:-38346243 | MS.gene46928:CDS |
| TACACCGTATGGAGGATGGG+AGG | 0.724621 | 4.3:-38346265 | MS.gene46928:CDS |
| GTTATGACACTTATGCTGCG+TGG | 0.726006 | 4.3:-38346687 | MS.gene46928:CDS |
| TCACTGAATGAGGAAACTGG+AGG | 0.742577 | 4.3:-38345037 | MS.gene46928:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAATTTCAAAAATAATTT+TGG | + | chr4.3:38343944-38343963 | None:intergenic | 10.0% |
| !! | TATAGGAAAATTAAGAATTT+GGG | - | chr4.3:38341862-38341881 | MS.gene46928:CDS | 15.0% |
| !! | TATGCAAATAAATGTTAAAA+GGG | + | chr4.3:38342412-38342431 | None:intergenic | 15.0% |
| !! | TTACAAATTATATAGTGTAA+CGG | - | chr4.3:38343325-38343344 | MS.gene46928:CDS | 15.0% |
| !! | TTATGCAAATAAATGTTAAA+AGG | + | chr4.3:38342413-38342432 | None:intergenic | 15.0% |
| !! | TTTGTAATTGTAATATTTAG+TGG | - | chr4.3:38344180-38344199 | MS.gene46928:intron | 15.0% |
| !!! | ATTGTATTTAATTTTATGAC+TGG | - | chr4.3:38343916-38343935 | MS.gene46928:CDS | 15.0% |
| !!! | CTGTTAATTTTTATACTAAA+AGG | + | chr4.3:38343399-38343418 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTTCATCTTAAA+AGG | - | chr4.3:38344509-38344528 | MS.gene46928:intron | 15.0% |
| !! | AAATTGAAAATCATAGCATA+TGG | + | chr4.3:38344322-38344341 | None:intergenic | 20.0% |
| !! | AGTATAAAAATTAACAGACA+TGG | - | chr4.3:38343402-38343421 | MS.gene46928:CDS | 20.0% |
| !! | ATGAAAAAAGAAAATATCCA+TGG | + | chr4.3:38344503-38344522 | None:intergenic | 20.0% |
| !! | CAACATTATAAGTAATATTC+TGG | + | chr4.3:38343856-38343875 | None:intergenic | 20.0% |
| !! | CACATTGTCAAAAAAAAAAA+AGG | + | chr4.3:38342843-38342862 | None:intergenic | 20.0% |
| !! | CTTATAAAATCCATCAAATA+TGG | + | chr4.3:38343436-38343455 | None:intergenic | 20.0% |
| !! | GATTTACTATTTGATATTCA+GGG | - | chr4.3:38344772-38344791 | MS.gene46928:CDS | 20.0% |
| !! | GTATAGGAAAATTAAGAATT+TGG | - | chr4.3:38341861-38341880 | MS.gene46928:CDS | 20.0% |
| !! | TAAAATACTATTTCCTTTGT+AGG | + | chr4.3:38343888-38343907 | None:intergenic | 20.0% |
| !! | TATGTTTATTTGCTCTTTAT+TGG | - | chr4.3:38344133-38344152 | MS.gene46928:intron | 20.0% |
| !! | TGATTTACTATTTGATATTC+AGG | - | chr4.3:38344771-38344790 | MS.gene46928:CDS | 20.0% |
| !! | TTAAAAGGGTTGTAAATAAA+AGG | + | chr4.3:38342398-38342417 | None:intergenic | 20.0% |
| !!! | AATGTTCTTTATTTGTATCA+AGG | - | chr4.3:38342148-38342167 | MS.gene46928:CDS | 20.0% |
| !!! | ATATTTGTGTATTTTATAGC+AGG | - | chr4.3:38345777-38345796 | MS.gene46928:intron | 20.0% |
| !!! | GAAATTTTCTTTTTTCATGT+AGG | - | chr4.3:38343955-38343974 | MS.gene46928:intron | 20.0% |
| !!! | TAATATTTGTTCTTGTGTTT+TGG | - | chr4.3:38344344-38344363 | MS.gene46928:CDS | 20.0% |
| !!! | TTTAGTTTTCTTAGTTGAAA+GGG | - | chr4.3:38342173-38342192 | MS.gene46928:CDS | 20.0% |
| !!! | TTTTTTTTTGACAATGTGAA+GGG | - | chr4.3:38342845-38342864 | MS.gene46928:intron | 20.0% |
| !!! | TTTTTTTTTTGACAATGTGA+AGG | - | chr4.3:38342844-38342863 | MS.gene46928:intron | 20.0% |
| ! | AAATTATATAGTGTAACGGT+AGG | - | chr4.3:38343329-38343348 | MS.gene46928:CDS | 25.0% |
| ! | AATGTCTGTAAGTATGAATA+TGG | + | chr4.3:38344237-38344256 | None:intergenic | 25.0% |
| ! | ACAGTTTATTTCAACATTCA+AGG | - | chr4.3:38346710-38346729 | MS.gene46928:CDS | 25.0% |
| ! | ACATATCAAGCTCATTTAAT+TGG | - | chr4.3:38345291-38345310 | MS.gene46928:CDS | 25.0% |
| ! | AGAGATATTTCAGAAGTTAT+GGG | + | chr4.3:38342696-38342715 | None:intergenic | 25.0% |
| ! | ATGATTTATATGCTTCCTTT+AGG | - | chr4.3:38344961-38344980 | MS.gene46928:intron | 25.0% |
| ! | ATGTCTGTAAGTATGAATAT+GGG | + | chr4.3:38344236-38344255 | None:intergenic | 25.0% |
| ! | CACAACTTATAATATGTTGA+AGG | - | chr4.3:38344675-38344694 | MS.gene46928:intron | 25.0% |
| ! | GATATACAATATATACCAGA+AGG | - | chr4.3:38343754-38343773 | MS.gene46928:intron | 25.0% |
| ! | TAAAAGTTGAAGCAGAAATA+AGG | + | chr4.3:38343804-38343823 | None:intergenic | 25.0% |
| ! | TAAACTGAAACTTAAAATGC+TGG | + | chr4.3:38344469-38344488 | None:intergenic | 25.0% |
| ! | TATTCATACTTACAGACATT+CGG | - | chr4.3:38344237-38344256 | MS.gene46928:intron | 25.0% |
| ! | TGAAAACACAATATCAGTAA+GGG | + | chr4.3:38345997-38346016 | None:intergenic | 25.0% |
| ! | TGAAAATATTCAACCTGTTT+GGG | - | chr4.3:38343023-38343042 | MS.gene46928:CDS | 25.0% |
| ! | TTGAAAAAGAACAAACTCTT+GGG | - | chr4.3:38345700-38345719 | MS.gene46928:intron | 25.0% |
| ! | TTGAAAACACAATATCAGTA+AGG | + | chr4.3:38345998-38346017 | None:intergenic | 25.0% |
| ! | TTGAAAATATTCAACCTGTT+TGG | - | chr4.3:38343022-38343041 | MS.gene46928:CDS | 25.0% |
| !! | AACTTTACTTAGTTTGAAGT+TGG | - | chr4.3:38342670-38342689 | MS.gene46928:intron | 25.0% |
| !! | CAAAACAATTTAAGACAATG+CGG | + | chr4.3:38343666-38343685 | None:intergenic | 25.0% |
| !! | GGTTTTTGTGTTTATGTTTA+TGG | - | chr4.3:38341615-38341634 | MS.gene46928:CDS | 25.0% |
| !! | GTACTCAATACATTTTCTTT+TGG | - | chr4.3:38345407-38345426 | MS.gene46928:CDS | 25.0% |
| !!! | AGATTCTATCTATTTTGAAG+AGG | - | chr4.3:38345235-38345254 | MS.gene46928:intron | 25.0% |
| !!! | CTTTAGTTTTCTTAGTTGAA+AGG | - | chr4.3:38342172-38342191 | MS.gene46928:CDS | 25.0% |
| !!! | GCATAATCAAAATCTAGTTT+TGG | + | chr4.3:38343078-38343097 | None:intergenic | 25.0% |
| !!! | TTCCTCTATTTTTAGATACT+CGG | - | chr4.3:38344552-38344571 | MS.gene46928:intron | 25.0% |
| AAAGAATCGCAGTAAAATAC+AGG | - | chr4.3:38342298-38342317 | MS.gene46928:intron | 30.0% | |
| AAATAACTCACCCTATAAAG+TGG | + | chr4.3:38344064-38344083 | None:intergenic | 30.0% | |
| AAATGTATTGAGTACCTCAT+TGG | + | chr4.3:38345402-38345421 | None:intergenic | 30.0% | |
| AACCGAGTATCTAAAAATAG+AGG | + | chr4.3:38344557-38344576 | None:intergenic | 30.0% | |
| AATCTACAACAATAAGAGGT+TGG | + | chr4.3:38346394-38346413 | None:intergenic | 30.0% | |
| AATGTATTGAGTACCTCATT+GGG | + | chr4.3:38345401-38345420 | None:intergenic | 30.0% | |
| AATTGAATCATTCTCAAAGC+TGG | - | chr4.3:38345211-38345230 | MS.gene46928:intron | 30.0% | |
| ACCAAGACAGATTTACATTA+GGG | + | chr4.3:38343513-38343532 | None:intergenic | 30.0% | |
| ACCTTTAGACTTATCCTAAA+AGG | - | chr4.3:38346296-38346315 | MS.gene46928:CDS | 30.0% | |
| AGAAGAAAACCAACATGATT+GGG | - | chr4.3:38341831-38341850 | MS.gene46928:CDS | 30.0% | |
| AGCTCATTTAATTGGAAATC+AGG | - | chr4.3:38345299-38345318 | MS.gene46928:CDS | 30.0% | |
| AGTTTACATTCAAGTATCCA+TGG | - | chr4.3:38344483-38344502 | MS.gene46928:intron | 30.0% | |
| ATACAACACAACAATGATTG+AGG | + | chr4.3:38342324-38342343 | None:intergenic | 30.0% | |
| ATATGCTTCCTTTAGGTATT+GGG | - | chr4.3:38344968-38344987 | MS.gene46928:intron | 30.0% | |
| ATTAAAGACAGATTTAGACC+TGG | + | chr4.3:38345659-38345678 | None:intergenic | 30.0% | |
| ATTGAATCATTCTCAAAGCT+GGG | - | chr4.3:38345212-38345231 | MS.gene46928:intron | 30.0% | |
| ATTGAGATCACACAGTAATA+AGG | + | chr4.3:38343113-38343132 | None:intergenic | 30.0% | |
| ATTGATATGTGTTACCTGTA+CGG | + | chr4.3:38343613-38343632 | None:intergenic | 30.0% | |
| ATTTACTGTCTTGATCTCTA+GGG | - | chr4.3:38345830-38345849 | MS.gene46928:intron | 30.0% | |
| CAAGGTGATTAAACATTCTA+GGG | + | chr4.3:38345683-38345702 | None:intergenic | 30.0% | |
| CAGGTGTACATAATCTTAAA+TGG | + | chr4.3:38345117-38345136 | None:intergenic | 30.0% | |
| CATCTTAATACCAGAATTCA+CGG | + | chr4.3:38344446-38344465 | None:intergenic | 30.0% | |
| CATTCAAAGCTAGCATATTA+TGG | - | chr4.3:38343461-38343480 | MS.gene46928:CDS | 30.0% | |
| CTAGTTACTACACATAAAAG+TGG | + | chr4.3:38342461-38342480 | None:intergenic | 30.0% | |
| CTATTGTAACTAGATGGAAT+TGG | + | chr4.3:38346158-38346177 | None:intergenic | 30.0% | |
| CTTGAAAAAGAACAAACTCT+TGG | - | chr4.3:38345699-38345718 | MS.gene46928:intron | 30.0% | |
| CTTGTGAAAAAGAAACTAGT+TGG | + | chr4.3:38346181-38346200 | None:intergenic | 30.0% | |
| GAAATCCATTTAACACTTTC+TGG | - | chr4.3:38345022-38345041 | MS.gene46928:CDS | 30.0% | |
| GAGAGATATTTCAGAAGTTA+TGG | + | chr4.3:38342697-38342716 | None:intergenic | 30.0% | |
| GATTCAATTCCTAATGACAA+AGG | + | chr4.3:38345200-38345219 | None:intergenic | 30.0% | |
| GCTCATTTAATTGGAAATCA+GGG | - | chr4.3:38345300-38345319 | MS.gene46928:CDS | 30.0% | |
| GGATTCTAATCCATATTTGA+TGG | - | chr4.3:38343423-38343442 | MS.gene46928:CDS | 30.0% | |
| TAAAAGGAAACATATCCAAC+CGG | + | chr4.3:38343383-38343402 | None:intergenic | 30.0% | |
| TACCAAGACAGATTTACATT+AGG | + | chr4.3:38343514-38343533 | None:intergenic | 30.0% | |
| TACTGAATGATGTATAGACT+AGG | + | chr4.3:38345272-38345291 | None:intergenic | 30.0% | |
| TAGTTCATCATGTAATCCAA+GGG | - | chr4.3:38344723-38344742 | MS.gene46928:intron | 30.0% | |
| TATATGCTTCCTTTAGGTAT+TGG | - | chr4.3:38344967-38344986 | MS.gene46928:intron | 30.0% | |
| TATTCAACTTTGACAGATCT+TGG | - | chr4.3:38343133-38343152 | MS.gene46928:intron | 30.0% | |
| TATTTACTGTCTTGATCTCT+AGG | - | chr4.3:38345829-38345848 | MS.gene46928:intron | 30.0% | |
| TCAAATCGATCAAAAAACTC+TGG | + | chr4.3:38343006-38343025 | None:intergenic | 30.0% | |
| TCAAGGTGATTAAACATTCT+AGG | + | chr4.3:38345684-38345703 | None:intergenic | 30.0% | |
| TCATGAATGATGTTATTCAC+CGG | - | chr4.3:38343361-38343380 | MS.gene46928:CDS | 30.0% | |
| TGTAAATTACAGCGATAACT+AGG | + | chr4.3:38343489-38343508 | None:intergenic | 30.0% | |
| TGTCAAGAAAAAATTGGAAC+AGG | - | chr4.3:38342961-38342980 | MS.gene46928:CDS | 30.0% | |
| TGTTGCAAGATAATGATTTC+AGG | - | chr4.3:38344828-38344847 | MS.gene46928:intron | 30.0% | |
| TTAGTTCATCATGTAATCCA+AGG | - | chr4.3:38344722-38344741 | MS.gene46928:intron | 30.0% | |
| TTATAATTCAGATGACAGAC+CGG | - | chr4.3:38346019-38346038 | MS.gene46928:intron | 30.0% | |
| ! | AATTGATTTCTGCAGAAAAC+CGG | - | chr4.3:38345539-38345558 | MS.gene46928:intron | 30.0% |
| ! | ATGAAAGAAGCTACCTTTTA+TGG | + | chr4.3:38345935-38345954 | None:intergenic | 30.0% |
| ! | ATGATTGGGCTTTAATGTAT+AGG | - | chr4.3:38341845-38341864 | MS.gene46928:CDS | 30.0% |
| ! | ATTTGAGATCCAACAACAAT+TGG | + | chr4.3:38344019-38344038 | None:intergenic | 30.0% |
| ! | ATTTTTGCATCGTAAGTGAT+TGG | + | chr4.3:38346241-38346260 | None:intergenic | 30.0% |
| ! | CATTTAAGATTATGTACACC+TGG | - | chr4.3:38345115-38345134 | MS.gene46928:CDS | 30.0% |
| ! | CGCATTGTCTTAAATTGTTT+TGG | - | chr4.3:38343664-38343683 | MS.gene46928:CDS | 30.0% |
| ! | TGATGATGTTAGATGTTGAT+AGG | - | chr4.3:38341992-38342011 | MS.gene46928:CDS | 30.0% |
| ! | TTTGAGATCCAACAACAATT+GGG | + | chr4.3:38344018-38344037 | None:intergenic | 30.0% |
| ! | TTTGATTATGCAAGTGCTTT+TGG | - | chr4.3:38343087-38343106 | MS.gene46928:CDS | 30.0% |
| !! | AACAGGTAGGTATTTGTTTT+AGG | - | chr4.3:38345056-38345075 | MS.gene46928:CDS | 30.0% |
| !! | ATGGCTCTAAAAGAAAATTC+TGG | + | chr4.3:38346664-38346683 | None:intergenic | 30.0% |
| !! | CAAGAGTTTGTTCTTTTTCA+AGG | + | chr4.3:38345701-38345720 | None:intergenic | 30.0% |
| !! | CTATCTATTTTGAAGAGGAA+GGG | - | chr4.3:38345240-38345259 | MS.gene46928:intron | 30.0% |
| !! | TAGATGTTGATAGGTTGATT+TGG | - | chr4.3:38342001-38342020 | MS.gene46928:CDS | 30.0% |
| !! | TCTATCTATTTTGAAGAGGA+AGG | - | chr4.3:38345239-38345258 | MS.gene46928:intron | 30.0% |
| !! | TTTTGGTTATACCTTGTGAA+TGG | + | chr4.3:38343061-38343080 | None:intergenic | 30.0% |
| !!! | ATCTCTAGGGAATTTTTTGT+CGG | - | chr4.3:38345843-38345862 | MS.gene46928:intron | 30.0% |
| !!! | TCCAATTTTTTCTTGACAAG+CGG | + | chr4.3:38342959-38342978 | None:intergenic | 30.0% |
| AACAAAATGTCCTCTGAGTT+CGG | + | chr4.3:38342094-38342113 | None:intergenic | 35.0% | |
| AAGCTAAAACTGGACATAGT+TGG | - | chr4.3:38344998-38345017 | MS.gene46928:intron | 35.0% | |
| AATCGATCAAAAAACTCTGG+CGG | + | chr4.3:38343003-38343022 | None:intergenic | 35.0% | |
| ACACATATCCCAATTGTTGT+TGG | - | chr4.3:38344007-38344026 | MS.gene46928:intron | 35.0% | |
| ACACTATCAATCACTGAATG+AGG | - | chr4.3:38343277-38343296 | MS.gene46928:intron | 35.0% | |
| ACATTAAAGCCCAATCATGT+TGG | + | chr4.3:38341843-38341862 | None:intergenic | 35.0% | |
| ACCACAAGAAAAACTGAAGA+AGG | + | chr4.3:38346431-38346450 | None:intergenic | 35.0% | |
| ACCCTAATGTAAATCTGTCT+TGG | - | chr4.3:38343509-38343528 | MS.gene46928:intron | 35.0% | |
| ACCTTGTGAATGGTGTAATA+GGG | + | chr4.3:38343051-38343070 | None:intergenic | 35.0% | |
| ACTTCTTTCAGAAATCCTAC+AGG | + | chr4.3:38341901-38341920 | None:intergenic | 35.0% | |
| AGAGCCATTATTCAACTTCA+GGG | - | chr4.3:38346676-38346695 | MS.gene46928:CDS | 35.0% | |
| AGCATATAAATCATCACACC+AGG | + | chr4.3:38344955-38344974 | None:intergenic | 35.0% | |
| AGCTAAAACTGGACATAGTT+GGG | - | chr4.3:38344999-38345018 | MS.gene46928:intron | 35.0% | |
| AGTTGGCTATTGTAACTAGA+TGG | + | chr4.3:38346164-38346183 | None:intergenic | 35.0% | |
| ATCAGAACAGAAGCCATAAA+AGG | - | chr4.3:38345919-38345938 | MS.gene46928:intron | 35.0% | |
| ATCTGCATAAGTGACTTCTT+TGG | + | chr4.3:38344878-38344897 | None:intergenic | 35.0% | |
| CAGAAGAAAACCAACATGAT+TGG | - | chr4.3:38341830-38341849 | MS.gene46928:CDS | 35.0% | |
| CTAATCGAATGAAGAGTGAT+TGG | + | chr4.3:38344706-38344725 | None:intergenic | 35.0% | |
| CTACAGTATATTGATCCAAC+AGG | + | chr4.3:38343163-38343182 | None:intergenic | 35.0% | |
| CTGCACAAAATTGAAGTGAA+GGG | + | chr4.3:38344598-38344617 | None:intergenic | 35.0% | |
| GAGGAATCTACAACAATAAG+AGG | + | chr4.3:38346398-38346417 | None:intergenic | 35.0% | |
| GGAAATCGGATCATTCTTTA+TGG | - | chr4.3:38344374-38344393 | MS.gene46928:intron | 35.0% | |
| GGAAATTGGGACATTAAAAC+CGG | - | chr4.3:38346101-38346120 | MS.gene46928:intron | 35.0% | |
| GTGTCCGAACTTAATATGAA+TGG | + | chr4.3:38345726-38345745 | None:intergenic | 35.0% | |
| TAAATGTCACTCGAAGGTAA+GGG | + | chr4.3:38345370-38345389 | None:intergenic | 35.0% | |
| TACCTTGTGAATGGTGTAAT+AGG | + | chr4.3:38343052-38343071 | None:intergenic | 35.0% | |
| TAGAGCCATTATTCAACTTC+AGG | - | chr4.3:38346675-38346694 | MS.gene46928:CDS | 35.0% | |
| TCATCCCTGAAGTTGAATAA+TGG | + | chr4.3:38346683-38346702 | None:intergenic | 35.0% | |
| TCCGCTTGTCAAGAAAAAAT+TGG | - | chr4.3:38342955-38342974 | MS.gene46928:CDS | 35.0% | |
| TCCGTTCAAGCTATTCTTTA+CGG | - | chr4.3:38346050-38346069 | MS.gene46928:intron | 35.0% | |
| TCGATATAACATTCACCACT+CGG | + | chr4.3:38343241-38343260 | None:intergenic | 35.0% | |
| TCTTCTGATAAGATCTTCCT+TGG | + | chr4.3:38341817-38341836 | None:intergenic | 35.0% | |
| TGGGCCATTCATATTAAGTT+CGG | - | chr4.3:38345719-38345738 | MS.gene46928:intron | 35.0% | |
| TTATGCACATTGTAGATGAC+TGG | - | chr4.3:38344082-38344101 | MS.gene46928:intron | 35.0% | |
| TTCAGAATTCAATATCGCCT+TGG | + | chr4.3:38345618-38345637 | None:intergenic | 35.0% | |
| TTCCAAAAGCTTGAGAACAT+TGG | + | chr4.3:38342590-38342609 | None:intergenic | 35.0% | |
| TTGCATCAAAGAATGAGACA+TGG | - | chr4.3:38341725-38341744 | MS.gene46928:CDS | 35.0% | |
| TTGGATCAATATACTGTAGC+TGG | - | chr4.3:38343164-38343183 | MS.gene46928:intron | 35.0% | |
| TTTAATGTCCCAATTTCCAG+TGG | + | chr4.3:38346099-38346118 | None:intergenic | 35.0% | |
| ! | AAATTTTCATGCAGACCTTC+TGG | + | chr4.3:38343772-38343791 | None:intergenic | 35.0% |
| ! | AACCAATGTTCTCAAGCTTT+TGG | - | chr4.3:38342585-38342604 | MS.gene46928:intron | 35.0% |
| ! | ACAGTCTGATTTGATTTACC+AGG | + | chr4.3:38345136-38345155 | None:intergenic | 35.0% |
| ! | ATACCATCCTATCAGTTTTG+TGG | - | chr4.3:38346625-38346644 | MS.gene46928:CDS | 35.0% |
| ! | GGATTCAAAGCATCTATTGT+TGG | - | chr4.3:38343548-38343567 | MS.gene46928:intron | 35.0% |
| ! | GTTCAATGTTGATGAAGTTC+CGG | + | chr4.3:38345561-38345580 | None:intergenic | 35.0% |
| ! | TATGCTTCCTTTAGGTATTG+GGG | - | chr4.3:38344969-38344988 | MS.gene46928:intron | 35.0% |
| ! | TTCAGTTTTTCTTGTGGTAC+CGG | - | chr4.3:38346433-38346452 | MS.gene46928:CDS | 35.0% |
| ! | TTGTTGTTGGATCTCAAATG+CGG | - | chr4.3:38344020-38344039 | MS.gene46928:intron | 35.0% |
| ! | TTTTACTAACAGCGCCTTTT+AGG | + | chr4.3:38346313-38346332 | None:intergenic | 35.0% |
| !! | GATAATGATTTCAGGTTTCG+CGG | - | chr4.3:38344836-38344855 | MS.gene46928:intron | 35.0% |
| !! | TTTTGGCTGTCAATTTCAAG+AGG | - | chr4.3:38343681-38343700 | MS.gene46928:CDS | 35.0% |
| !!! | GCCTTTTAGGATAAGTCTAA+AGG | + | chr4.3:38346300-38346319 | None:intergenic | 35.0% |
| !!! | TACGCATTTTTAACTTCCCT+TGG | + | chr4.3:38344742-38344761 | None:intergenic | 35.0% |
| AAACCCTCAAGCTCTCAAAA+TGG | - | chr4.3:38343187-38343206 | MS.gene46928:intron | 40.0% | |
| AAAGGTTCGCAACCATGATT+TGG | + | chr4.3:38342380-38342399 | None:intergenic | 40.0% | |
| AAGAGAATAGCAGACAACCT+TGG | - | chr4.3:38344628-38344647 | MS.gene46928:intron | 40.0% | |
| AAGCTCTCAAAATGGTGACA+TGG | - | chr4.3:38343195-38343214 | MS.gene46928:intron | 40.0% | |
| AAGGTTCGCAACCATGATTT+GGG | + | chr4.3:38342379-38342398 | None:intergenic | 40.0% | |
| AGAAGGTAAATGTCACTCGA+AGG | + | chr4.3:38345376-38345395 | None:intergenic | 40.0% | |
| AGGTTGTCTGCTATTCTCTT+TGG | + | chr4.3:38344628-38344647 | None:intergenic | 40.0% | |
| AGTATATTGATCCAACAGGC+CGG | + | chr4.3:38343159-38343178 | None:intergenic | 40.0% | |
| ATCATTCCAGGCAGATCAAT+TGG | + | chr4.3:38346350-38346369 | None:intergenic | 40.0% | |
| ATTCAAAGAGGAACAGATCC+TGG | - | chr4.3:38344934-38344953 | MS.gene46928:intron | 40.0% | |
| ATTTACCTTCTCTCCCAATG+AGG | - | chr4.3:38345385-38345404 | MS.gene46928:CDS | 40.0% | |
| CAATCACTGAATGAGGAAAC+TGG | - | chr4.3:38343284-38343303 | MS.gene46928:intron | 40.0% | |
| CAATGTCAAAGATCGCAACA+TGG | + | chr4.3:38342277-38342296 | None:intergenic | 40.0% | |
| CAATGTGATTGTAGCAACCA+GGG | - | chr4.3:38342220-38342239 | MS.gene46928:CDS | 40.0% | |
| CACAAAGAATGATAGCCTGA+AGG | - | chr4.3:38342903-38342922 | MS.gene46928:intron | 40.0% | |
| CCCGTAAAGAATAGCTTGAA+CGG | + | chr4.3:38346054-38346073 | None:intergenic | 40.0% | |
| CCGTTCAAGCTATTCTTTAC+GGG | - | chr4.3:38346051-38346070 | MS.gene46928:intron | 40.0% | |
| CCTGCACAAAATTGAAGTGA+AGG | + | chr4.3:38344599-38344618 | None:intergenic | 40.0% | |
| CCTTTAGCCACAAAACTGAT+AGG | + | chr4.3:38346635-38346654 | None:intergenic | 40.0% | |
| CTGCATACTCCTTTGTCATT+AGG | - | chr4.3:38345188-38345207 | MS.gene46928:intron | 40.0% | |
| CTGGGTCATTAGAAGATATG+TGG | + | chr4.3:38345445-38345464 | None:intergenic | 40.0% | |
| CTTCATTCTCTGTTGTTCCA+AGG | + | chr4.3:38344648-38344667 | None:intergenic | 40.0% | |
| GAATGATGTTATTCACCGGT+TGG | - | chr4.3:38343365-38343384 | MS.gene46928:CDS | 40.0% | |
| GCAAGCAATCCTAAAAAGCA+TGG | + | chr4.3:38343591-38343610 | None:intergenic | 40.0% | |
| GCTAAAACTGGACATAGTTG+GGG | - | chr4.3:38345000-38345019 | MS.gene46928:CDS | 40.0% | |
| GCTTCTGTTCTGATGATAAG+AGG | + | chr4.3:38345913-38345932 | None:intergenic | 40.0% | |
| GTAAATGTCACTCGAAGGTA+AGG | + | chr4.3:38345371-38345390 | None:intergenic | 40.0% | |
| GTATTGCCTTAATCCTTTCC+CGG | + | chr4.3:38346609-38346628 | None:intergenic | 40.0% | |
| GTCTTGGTATGCTATATGCA+GGG | - | chr4.3:38343525-38343544 | MS.gene46928:intron | 40.0% | |
| TAGCCACAAAACTGATAGGA+TGG | + | chr4.3:38346631-38346650 | None:intergenic | 40.0% | |
| TAGCCTGAAGGAGAAAATGT+CGG | - | chr4.3:38342915-38342934 | MS.gene46928:intron | 40.0% | |
| TCCCTATTACACCATTCACA+AGG | - | chr4.3:38343047-38343066 | MS.gene46928:CDS | 40.0% | |
| TCTCAAAATGGTGACATGGA+TGG | - | chr4.3:38343199-38343218 | MS.gene46928:intron | 40.0% | |
| TCTGAAAGAAGTTCCTCTTG+AGG | - | chr4.3:38341909-38341928 | MS.gene46928:CDS | 40.0% | |
| TCTTGGTATGCTATATGCAG+GGG | - | chr4.3:38343526-38343545 | MS.gene46928:intron | 40.0% | |
| TCTTTCAGAAATCCTACAGG+TGG | + | chr4.3:38341898-38341917 | None:intergenic | 40.0% | |
| TGAACTTTCGTGTACCATCT+TGG | - | chr4.3:38345576-38345595 | MS.gene46928:intron | 40.0% | |
| TGGTGACTTACAATCATTCC+AGG | + | chr4.3:38346362-38346381 | None:intergenic | 40.0% | |
| TGTCTTGGTATGCTATATGC+AGG | - | chr4.3:38343524-38343543 | MS.gene46928:intron | 40.0% | |
| TTATGTCGAAGCCCAAATCA+TGG | - | chr4.3:38342365-38342384 | MS.gene46928:intron | 40.0% | |
| TTCGAAACCCCAATACCTAA+AGG | + | chr4.3:38344979-38344998 | None:intergenic | 40.0% | |
| TTGCAGAAGCTGAAAATTGC+AGG | + | chr4.3:38342793-38342812 | None:intergenic | 40.0% | |
| ! | AAAAGCATGGCTTGTCGAAA+AGG | + | chr4.3:38343578-38343597 | None:intergenic | 40.0% |
| ! | ACAACAATAAGAGGTTGGTC+TGG | + | chr4.3:38346389-38346408 | None:intergenic | 40.0% |
| ! | ACGACCACTATTTAAAACCC+TGG | + | chr4.3:38342240-38342259 | None:intergenic | 40.0% |
| ! | CCTTCACTTCAATTTTGTGC+AGG | - | chr4.3:38344596-38344615 | MS.gene46928:intron | 40.0% |
| ! | GAACTCAGAGGACATTTTGT+TGG | - | chr4.3:38342093-38342112 | MS.gene46928:CDS | 40.0% |
| ! | GCCTTCTTCAGTTTTTCTTG+TGG | - | chr4.3:38346427-38346446 | MS.gene46928:CDS | 40.0% |
| ! | GCGTGGTTGTGTTACTATTA+AGG | - | chr4.3:38341654-38341673 | MS.gene46928:CDS | 40.0% |
| ! | TCAGTTTTTCTTGTGGTACC+GGG | - | chr4.3:38346434-38346453 | MS.gene46928:CDS | 40.0% |
| ! | TGATTTTGTCCATCCAAACC+CGG | + | chr4.3:38346455-38346474 | None:intergenic | 40.0% |
| !! | AGAACATTGGTTCCTGTTTG+GGG | + | chr4.3:38342577-38342596 | None:intergenic | 40.0% |
| !! | ATAGGTTGATTTGGAGCTTC+AGG | - | chr4.3:38342010-38342029 | MS.gene46928:CDS | 40.0% |
| !! | ATCAGTTTTGTGGCTAAAGG+AGG | - | chr4.3:38346635-38346654 | MS.gene46928:CDS | 40.0% |
| !! | CAGCACCAGAAAGTGTTAAA+TGG | + | chr4.3:38345030-38345049 | None:intergenic | 40.0% |
| !! | CCTATCAGTTTTGTGGCTAA+AGG | - | chr4.3:38346632-38346651 | MS.gene46928:CDS | 40.0% |
| !! | GAGAACATTGGTTCCTGTTT+GGG | + | chr4.3:38342578-38342597 | None:intergenic | 40.0% |
| !! | GTTTTGGCGTGTTAGGAAAT+CGG | - | chr4.3:38344360-38344379 | MS.gene46928:intron | 40.0% |
| !! | TCACCATTTTGAGAGCTTGA+GGG | + | chr4.3:38343193-38343212 | None:intergenic | 40.0% |
| !! | TGAGAACATTGGTTCCTGTT+TGG | + | chr4.3:38342579-38342598 | None:intergenic | 40.0% |
| !! | TTCGACAAGCCATGCTTTTT+AGG | - | chr4.3:38343579-38343598 | MS.gene46928:intron | 40.0% |
| !!! | AGGGTTTTAAATAGTGGTCG+TGG | - | chr4.3:38342239-38342258 | MS.gene46928:CDS | 40.0% |
| !!! | GCAACCAGGGTTTTAAATAG+TGG | - | chr4.3:38342233-38342252 | MS.gene46928:CDS | 40.0% |
| !!! | TTCTTGTGTTTTGGCGTGTT+AGG | - | chr4.3:38344353-38344372 | MS.gene46928:intron | 40.0% |
| AACAACTGTCTGAGTGAGCA+AGG | + | chr4.3:38345330-38345349 | None:intergenic | 45.0% | |
| AAGCAGCAAGTTTCATGTCC+GGG | - | chr4.3:38346588-38346607 | MS.gene46928:CDS | 45.0% | |
| AAGTTCCTCTTGAGGATGTG+AGG | - | chr4.3:38341917-38341936 | MS.gene46928:CDS | 45.0% | |
| AGAAGCTGAAAATTGCAGGC+AGG | + | chr4.3:38342789-38342808 | None:intergenic | 45.0% | |
| AGTTGTTCCAGCAGCTTCAT+CGG | - | chr4.3:38345343-38345362 | MS.gene46928:CDS | 45.0% | |
| ATGCAAAAATCACCTGAGCC+TGG | - | chr4.3:38346251-38346270 | MS.gene46928:CDS | 45.0% | |
| ATTGTTGTAGATTCCTCCCG+TGG | - | chr4.3:38346401-38346420 | MS.gene46928:CDS | 45.0% | |
| CAAATGCGGTATGAAGTCAC+CGG | - | chr4.3:38344034-38344053 | MS.gene46928:intron | 45.0% | |
| CAACTCAGTCGCATACGTTT+CGG | - | chr4.3:38341692-38341711 | MS.gene46928:CDS | 45.0% | |
| CAACTTTGACAGATCTTGGC+CGG | - | chr4.3:38343137-38343156 | MS.gene46928:intron | 45.0% | |
| CAAGCAGCAAGTTTCATGTC+CGG | - | chr4.3:38346587-38346606 | MS.gene46928:CDS | 45.0% | |
| CACCCTATAAAGTGGATCAC+CGG | + | chr4.3:38344056-38344075 | None:intergenic | 45.0% | |
| CACCGGTGATCCACTTTATA+GGG | - | chr4.3:38344051-38344070 | MS.gene46928:intron | 45.0% | |
| CAGGCTATCATTCTTTGTGC+TGG | + | chr4.3:38342902-38342921 | None:intergenic | 45.0% | |
| CTAGAACCAATTGATCTGCC+TGG | - | chr4.3:38346341-38346360 | MS.gene46928:CDS | 45.0% | |
| CTTCTTTGGTCCATCTGAAC+AGG | + | chr4.3:38344864-38344883 | None:intergenic | 45.0% | |
| CTTGGTATGCTATATGCAGG+GGG | - | chr4.3:38343527-38343546 | MS.gene46928:intron | 45.0% | |
| GAACCTAATACCGAACTCAG+AGG | - | chr4.3:38342081-38342100 | MS.gene46928:CDS | 45.0% | |
| GCAATGTGATTGTAGCAACC+AGG | - | chr4.3:38342219-38342238 | MS.gene46928:CDS | 45.0% | |
| GCCTTAACGAATGGTGTACT+CGG | - | chr4.3:38344910-38344929 | MS.gene46928:intron | 45.0% | |
| GCTTGAACGGATGCATATTC+CGG | + | chr4.3:38346041-38346060 | None:intergenic | 45.0% | |
| GGGGTTTCGAAAGCTAAAAC+TGG | - | chr4.3:38344988-38345007 | MS.gene46928:intron | 45.0% | |
| GGTGTACTCGGAATTCAAAG+AGG | - | chr4.3:38344922-38344941 | MS.gene46928:intron | 45.0% | |
| GTGTATAGCGATATGAGCTC+TGG | - | chr4.3:38346515-38346534 | MS.gene46928:CDS | 45.0% | |
| GTGTGACCAGCAAGAAGATA+TGG | + | chr4.3:38346077-38346096 | None:intergenic | 45.0% | |
| GTTATGACACTTATGCTGCG+TGG | - | chr4.3:38341637-38341656 | MS.gene46928:CDS | 45.0% | |
| GTTGTTCTGCTCACCTACAA+AGG | - | chr4.3:38343872-38343891 | MS.gene46928:intron | 45.0% | |
| TATGAGCGTGCCTTAACGAA+TGG | - | chr4.3:38344901-38344920 | MS.gene46928:intron | 45.0% | |
| TCAAAGGTCCAACACATGCT+GGG | + | chr4.3:38345463-38345482 | None:intergenic | 45.0% | |
| TCACCGGTGATCCACTTTAT+AGG | - | chr4.3:38344050-38344069 | MS.gene46928:intron | 45.0% | |
| TCACTGAATGAGGAAACTGG+AGG | - | chr4.3:38343287-38343306 | MS.gene46928:CDS | 45.0% | |
| TCATGTCCGGGAAAGGATTA+AGG | - | chr4.3:38346600-38346619 | MS.gene46928:CDS | 45.0% | |
| TCCGAGTACACCATTCGTTA+AGG | + | chr4.3:38344914-38344933 | None:intergenic | 45.0% | |
| TCTAATGACCCAGCATGTGT+TGG | - | chr4.3:38345452-38345471 | MS.gene46928:CDS | 45.0% | |
| TGGTCACACCACTGGAAATT+GGG | - | chr4.3:38346088-38346107 | MS.gene46928:intron | 45.0% | |
| TGTCCTCTGAGTTCGGTATT+AGG | + | chr4.3:38342087-38342106 | None:intergenic | 45.0% | |
| TGTGGCACAGCAGACTAATT+TGG | - | chr4.3:38341963-38341982 | MS.gene46928:CDS | 45.0% | |
| TTCAAAGGTCCAACACATGC+TGG | + | chr4.3:38345464-38345483 | None:intergenic | 45.0% | |
| TTCTTGACAAGCGGATAGAC+CGG | + | chr4.3:38342950-38342969 | None:intergenic | 45.0% | |
| ! | GAGTGCATCAGCTCTAATGT+GGG | - | chr4.3:38342876-38342895 | MS.gene46928:intron | 45.0% |
| ! | GATTTGGAGCTTCAGGAAGA+CGG | - | chr4.3:38342017-38342036 | MS.gene46928:CDS | 45.0% |
| ! | TGAGTGCATCAGCTCTAATG+TGG | - | chr4.3:38342875-38342894 | MS.gene46928:intron | 45.0% |
| ! | TTTAGGATTGCTTGCCGTAC+AGG | - | chr4.3:38343596-38343615 | MS.gene46928:intron | 45.0% |
| !! | AAAATGTCGGCTCTTGTTGC+CGG | - | chr4.3:38342928-38342947 | MS.gene46928:intron | 45.0% |
| !! | AACACTTTCTGGTGCTGCTA+TGG | - | chr4.3:38345033-38345052 | MS.gene46928:CDS | 45.0% |
| !! | CGATTACTTTTACGACCGAG+TGG | - | chr4.3:38343223-38343242 | MS.gene46928:intron | 45.0% |
| !! | GAACATTGGTTCCTGTTTGG+GGG | + | chr4.3:38342576-38342595 | None:intergenic | 45.0% |
| !! | GTCACCATTTTGAGAGCTTG+AGG | + | chr4.3:38343194-38343213 | None:intergenic | 45.0% |
| !! | TAAGAGGTTGGTCTGGTTCT+TGG | + | chr4.3:38346382-38346401 | None:intergenic | 45.0% |
| !! | TGCAACAGCTTTGTTAGCAC+CGG | + | chr4.3:38346123-38346142 | None:intergenic | 45.0% |
| !! | TTTTCTTGTGGTACCGGGTT+TGG | - | chr4.3:38346439-38346458 | MS.gene46928:CDS | 45.0% |
| !! | TTATAAATTTATAATTTCAA+AGG | + | chr4.3:38345479-38345498 | None:intergenic | 5.0% |
| !!! | AAAATTTCAAAAATAATTTT+GGG | + | chr4.3:38343943-38343962 | None:intergenic | 5.0% |
| ACCGACCGATGAATCTGCTT+GGG | - | chr4.3:38341780-38341799 | MS.gene46928:CDS | 50.0% | |
| ACTTTATCTCTGCCAGCTCC+AGG | - | chr4.3:38345638-38345657 | MS.gene46928:intron | 50.0% | |
| AGCTGCCCAAGCAGATTCAT+CGG | + | chr4.3:38341788-38341807 | None:intergenic | 50.0% | |
| AGTGGTCGTGGTAACAGTTG+TGG | - | chr4.3:38342251-38342270 | MS.gene46928:CDS | 50.0% | |
| CGAAACGTATGCGACTGAGT+TGG | + | chr4.3:38341694-38341713 | None:intergenic | 50.0% | |
| CTGGTCACACCACTGGAAAT+TGG | - | chr4.3:38346087-38346106 | MS.gene46928:intron | 50.0% | |
| CTGGTTCAGGAGTTAAGCTC+AGG | - | chr4.3:38346534-38346553 | MS.gene46928:CDS | 50.0% | |
| GACAGATTTAGACCTGGAGC+TGG | + | chr4.3:38345653-38345672 | None:intergenic | 50.0% | |
| GAGTACCTCATTGGGAGAGA+AGG | + | chr4.3:38345393-38345412 | None:intergenic | 50.0% | |
| GCAAGTTTCATGTCCGGGAA+AGG | - | chr4.3:38346593-38346612 | MS.gene46928:CDS | 50.0% | |
| GGACATCAGTCCGTGAATTC+TGG | - | chr4.3:38344433-38344452 | MS.gene46928:intron | 50.0% | |
| GGTGTGTTTAAGCCACCTGT+AGG | - | chr4.3:38341883-38341902 | MS.gene46928:CDS | 50.0% | |
| GTGTAATAGGGAGCCCAAAC+AGG | + | chr4.3:38343039-38343058 | None:intergenic | 50.0% | |
| TACGGGCCATATCTTCTTGC+TGG | - | chr4.3:38346068-38346087 | MS.gene46928:intron | 50.0% | |
| TCTTCTCACAGCTATGCGAC+TGG | - | chr4.3:38344408-38344427 | MS.gene46928:intron | 50.0% | |
| TGAAGAGCGACATCAGTACC+AGG | + | chr4.3:38346272-38346291 | None:intergenic | 50.0% | |
| TGGTACACCGTATGGAGGAT+GGG | - | chr4.3:38342056-38342075 | MS.gene46928:CDS | 50.0% | |
| ! | AGCGATATGAGCTCTGGTTC+AGG | - | chr4.3:38346521-38346540 | MS.gene46928:CDS | 50.0% |
| ! | ATTGGTTCCTGTTTGGGGGA+GGG | + | chr4.3:38342572-38342591 | None:intergenic | 50.0% |
| ! | GAGCCGACATTTTCTCCTTC+AGG | + | chr4.3:38342921-38342940 | None:intergenic | 50.0% |
| ! | TTTTGTCGGTCACACGACAG+TGG | - | chr4.3:38345857-38345876 | MS.gene46928:intron | 50.0% |
| !! | CGGACATGAAACTTGCTGCT+TGG | + | chr4.3:38346589-38346608 | None:intergenic | 50.0% |
| !! | TTCTGGTGCTGCTATGGAAC+AGG | - | chr4.3:38345039-38345058 | MS.gene46928:CDS | 50.0% |
| AAACTGAAGAAGGCCCGCCA+CGG | + | chr4.3:38346421-38346440 | None:intergenic | 55.0% | |
| ACTCCTGGTACACCGTATGG+AGG | - | chr4.3:38342051-38342070 | MS.gene46928:CDS | 55.0% | |
| AGCAGCCTCACATCCTCAAG+AGG | + | chr4.3:38341925-38341944 | None:intergenic | 55.0% | |
| CACCGACCGATGAATCTGCT+TGG | - | chr4.3:38341779-38341798 | MS.gene46928:CDS | 55.0% | |
| CATCCTCCATACGGTGTACC+AGG | + | chr4.3:38342057-38342076 | None:intergenic | 55.0% | |
| CCATACGGTGTACCAGGAGT+CGG | + | chr4.3:38342051-38342070 | None:intergenic | 55.0% | |
| CCATCTTGGAGTCGTGGAGA+CGG | - | chr4.3:38345590-38345609 | MS.gene46928:intron | 55.0% | |
| CGTGTACCATCTTGGAGTCG+TGG | - | chr4.3:38345584-38345603 | MS.gene46928:intron | 55.0% | |
| CTCACAGCTATGCGACTGGA+GGG | - | chr4.3:38344412-38344431 | MS.gene46928:intron | 55.0% | |
| CTGAAGGGTCAGCTTGTCAC+CGG | + | chr4.3:38345887-38345906 | None:intergenic | 55.0% | |
| CTGGTACACCGTATGGAGGA+TGG | - | chr4.3:38342055-38342074 | MS.gene46928:CDS | 55.0% | |
| CTTCTTGCTGGTCACACCAC+TGG | - | chr4.3:38346080-38346099 | MS.gene46928:intron | 55.0% | |
| CTTGGGCAGCTTTGCTTCCA+AGG | - | chr4.3:38341797-38341816 | MS.gene46928:CDS | 55.0% | |
| GCCCAAGCAGATTCATCGGT+CGG | + | chr4.3:38341784-38341803 | None:intergenic | 55.0% | |
| GGATGGTTCGATTCACGCTG+TGG | - | chr4.3:38341945-38341964 | MS.gene46928:CDS | 55.0% | |
| GGTTCCTCCCATCCTCCATA+CGG | + | chr4.3:38342066-38342085 | None:intergenic | 55.0% | |
| GTTGTAGATTCCTCCCGTGG+CGG | - | chr4.3:38346404-38346423 | MS.gene46928:CDS | 55.0% | |
| TAAGGGTCCGATGAAGCTGC+TGG | + | chr4.3:38345353-38345372 | None:intergenic | 55.0% | |
| TACACCGTATGGAGGATGGG+AGG | - | chr4.3:38342059-38342078 | MS.gene46928:CDS | 55.0% | |
| TCTCACAGCTATGCGACTGG+AGG | - | chr4.3:38344411-38344430 | MS.gene46928:intron | 55.0% | |
| TCTTGAGGATGTGAGGCTGC+TGG | - | chr4.3:38341924-38341943 | MS.gene46928:CDS | 55.0% | |
| TTGGTTCCTGTTTGGGGGAG+GGG | + | chr4.3:38342571-38342590 | None:intergenic | 55.0% | |
| TTGTAGATTCCTCCCGTGGC+GGG | - | chr4.3:38346405-38346424 | MS.gene46928:CDS | 55.0% | |
| TTTCGCGGCACCTGTTCAGA+TGG | - | chr4.3:38344851-38344870 | MS.gene46928:intron | 55.0% | |
| ! | CTTGTGGTACCGGGTTTGGA+TGG | - | chr4.3:38346443-38346462 | MS.gene46928:CDS | 55.0% |
| !! | CATTGGTTCCTGTTTGGGGG+AGG | + | chr4.3:38342573-38342592 | None:intergenic | 55.0% |
| !! | GGTGCTGCTATGGAACAGGT+AGG | - | chr4.3:38345043-38345062 | MS.gene46928:CDS | 55.0% |
| AACTGAAGAAGGCCCGCCAC+GGG | + | chr4.3:38346420-38346439 | None:intergenic | 60.0% | |
| ACAGATCTTGGCCGGCCTGT+TGG | - | chr4.3:38343145-38343164 | MS.gene46928:intron | 60.0% | |
| CCGACTCCTGGTACACCGTA+TGG | - | chr4.3:38342048-38342067 | MS.gene46928:CDS | 60.0% | |
| CCGTCTCCACGACTCCAAGA+TGG | + | chr4.3:38345593-38345612 | None:intergenic | 60.0% | |
| GAGGATGTGAGGCTGCTGGA+TGG | - | chr4.3:38341928-38341947 | MS.gene46928:CDS | 60.0% | |
| GCGACATCAGTACCAGGCTC+AGG | + | chr4.3:38346266-38346285 | None:intergenic | 60.0% | |
| GTCACACGACAGTGGAGTGC+CGG | - | chr4.3:38345865-38345884 | MS.gene46928:intron | 60.0% | |
| TACCTACCCCTCCCCCAAAC+AGG | - | chr4.3:38342562-38342581 | MS.gene46928:intron | 60.0% | |
| TGGAGCTTCAGGAAGACGGC+TGG | - | chr4.3:38342021-38342040 | MS.gene46928:CDS | 60.0% | |
| TTCCTGTTTGGGGGAGGGGT+AGG | + | chr4.3:38342567-38342586 | None:intergenic | 60.0% | |
| !! | ACGGCTGGTTTACCGACTCC+TGG | - | chr4.3:38342036-38342055 | MS.gene46928:CDS | 60.0% |
| ! | GAGTCGTGGAGACGGTGCCA+AGG | - | chr4.3:38345598-38345617 | MS.gene46928:intron | 65.0% |
| TGAAGAAGGCCCGCCACGGG+AGG | + | chr4.3:38346417-38346436 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 38341610 | 38346736 | 38341610 | ID=MS.gene46928 |
| chr4.3 | mRNA | 38341610 | 38346736 | 38341610 | ID=MS.gene46928.t1;Parent=MS.gene46928 |
| chr4.3 | exon | 38346232 | 38346736 | 38346232 | ID=MS.gene46928.t1.exon1;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38346232 | 38346736 | 38346232 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38345278 | 38345480 | 38345278 | ID=MS.gene46928.t1.exon2;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38345278 | 38345480 | 38345278 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38345000 | 38345197 | 38345000 | ID=MS.gene46928.t1.exon3;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38345000 | 38345197 | 38345000 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38344729 | 38344800 | 38344729 | ID=MS.gene46928.t1.exon4;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38344729 | 38344800 | 38344729 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38344274 | 38344369 | 38344274 | ID=MS.gene46928.t1.exon5;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38344274 | 38344369 | 38344274 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38343892 | 38343971 | 38343892 | ID=MS.gene46928.t1.exon6;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38343892 | 38343971 | 38343892 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38343650 | 38343728 | 38343650 | ID=MS.gene46928.t1.exon7;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38343650 | 38343728 | 38343650 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38343286 | 38343496 | 38343286 | ID=MS.gene46928.t1.exon8;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38343286 | 38343496 | 38343286 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38342940 | 38343136 | 38342940 | ID=MS.gene46928.t1.exon9;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38342940 | 38343136 | 38342940 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38342687 | 38342792 | 38342687 | ID=MS.gene46928.t1.exon10;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38342687 | 38342792 | 38342687 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38342406 | 38342495 | 38342406 | ID=MS.gene46928.t1.exon11;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38342406 | 38342495 | 38342406 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| chr4.3 | exon | 38341610 | 38342316 | 38341610 | ID=MS.gene46928.t1.exon12;Parent=MS.gene46928.t1 |
| chr4.3 | CDS | 38341610 | 38342316 | 38341610 | ID=cds.MS.gene46928.t1;Parent=MS.gene46928.t1 |
| Gene Sequence |
| Protein sequence |
